View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11514_high_27 (Length: 299)
Name: NF11514_high_27
Description: NF11514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11514_high_27 |
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Alignment Details
Target: chr5 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 49 - 291
Target Start/End: Original strand, 7836912 - 7837154
Alignment:
| Q |
49 |
atatatatattattctaatatagatctcaaacacacaaaggttaattaggtctttgttaatggaaacaaagatgtcacaaacaactttaggttacaatag |
148 |
Q |
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| T |
7836912 |
atatatatattattctaatatagatctcaaacacacaaaggttaattaggtctttgttaatggaaacaaagatgtcacaaacaactttaggttacaatag |
7837011 |
T |
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| Q |
149 |
agattcttcttcttcttcaccaactccaccaccaccacctcaagttcacacattagtcttcaataacccacctcaaaattcacaccctaaccataatact |
248 |
Q |
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| T |
7837012 |
agattcttcttcttcttcaccaactccaccaccaccacctcaagttcacacattagtcttcaataacccacctcaaaattcacaccctaaccataatact |
7837111 |
T |
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| Q |
249 |
actactaatctttatccaccaccacatcttgcaccttcttctc |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7837112 |
actactaatctttatccaccaccacatcttgcaccttcttctc |
7837154 |
T |
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