View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11514_high_44 (Length: 241)
Name: NF11514_high_44
Description: NF11514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11514_high_44 |
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Alignment Details
Target: chr3 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 26105474 - 26105568
Alignment:
| Q |
131 |
gagaagggtaaggttatgaaatgcagtgtgattttagctaatattaattattttacagcttaatctttttgacagatggctttgacaattacatg |
225 |
Q |
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| T |
26105474 |
gagaagggtaaggttatgaaatgcagtgtgattttagctaatattaattattttacagcttaatctttttgacagatggctttgacaattacatg |
26105568 |
T |
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Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 26105352 - 26105426
Alignment:
| Q |
4 |
gaatgtatttaaatttgaccaatgatctcctccaattgaatctttctaaaatcccaacataaacattgatatgag |
78 |
Q |
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| T |
26105352 |
gaatgtatttaaatttgaccaatgatctcctccaattgaatctttctaaaatcccaacataaacattgatatgag |
26105426 |
T |
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