View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11514_high_45 (Length: 239)
Name: NF11514_high_45
Description: NF11514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11514_high_45 |
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Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 3 - 219
Target Start/End: Complemental strand, 14959687 - 14959471
Alignment:
| Q |
3 |
tgtataagttagcttgtaaatgtcgttctcgttcggcttctcttcccatctgcccctgcgtataggccctcgtgttctctgcaattgttctgttgctatc |
102 |
Q |
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| T |
14959687 |
tgtataagttagcttgtaaatgtcgttcttgttcggcttctcttcccatctgcccctgcgtataggccctcatgttctctgcaattgttctgttgctatc |
14959588 |
T |
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| Q |
103 |
ttcattcaccatattatttcaactctcccaccccctctgccggacaatggtttcaaaaattgcgttctttggatttgaagctttggtagggtggtggttg |
202 |
Q |
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| T |
14959587 |
ttcattcaccatattatttaaactctcccaccccctcaaccggacaatggtttcaaaaatcgcgttctttggatttgaagctttggtagggtggtggttg |
14959488 |
T |
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| Q |
203 |
tggtgcactgctggatg |
219 |
Q |
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||||||| || |||||| |
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| T |
14959487 |
tggtgcattgttggatg |
14959471 |
T |
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