View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11515_high_38 (Length: 238)
Name: NF11515_high_38
Description: NF11515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11515_high_38 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 25336073 - 25336292
Alignment:
| Q |
1 |
aaagtgatagaattgtctaaaaaatgttatatgacaaatcactacatcatgtatacaaacaaaatcatattccaatacaattaaattcatctaagtttgt |
100 |
Q |
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|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |
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| T |
25336073 |
aaagtgatagaattgtctaaaaaatgttattt----aatcactacatcatgtatacaaacaaaatcatattgcaatacaattaaattcagctaagtttgt |
25336168 |
T |
|
| Q |
101 |
atctcatgctaagtttcaagtacattaaaaccgtgtatctcacctactatcaatcacatacgcaattcaaccttaaccatatatttctattttagaaacg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
25336169 |
atctcatgctaagtttcaagtacattaaaaccgtgtatctcacctactatcaatcacatacgcaattcaaccttaaccatatatttctattttagaaacg |
25336268 |
T |
|
| Q |
201 |
tgccacttttagtcttttctttct |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
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|
| T |
25336269 |
tgccacttttagtcttttctttct |
25336292 |
T |
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