View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11515_low_39 (Length: 239)
Name: NF11515_low_39
Description: NF11515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11515_low_39 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 33813402 - 33813623
Alignment:
| Q |
1 |
ccaataagacacttcaccccatattctcctcacacagagactagacaatctttgtaattttccacacccaaagaatcttgtctaaccatatcttttgtca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33813402 |
ccaataagacacttcaccccatattctcctcacacagagactagacaatctttgtaattttccacacccaaagaatcttgtctaaccatatcttttgtca |
33813501 |
T |
|
| Q |
101 |
ggttatatggtatgaagtgaaccctctcactcctcaatcaatctcaatgtggaatgtggttgcccttacaatttcatgtaattgtttgcttttaaggtgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
33813502 |
ggttatatggtatgaagtgaaccctctcactcctcaatcaatctcaatgtggaatgtggttgcccttaaaatttcatgtaattgtttgcttttaaggtgg |
33813601 |
T |
|
| Q |
201 |
gggaccatctataacatgggaat |
223 |
Q |
| |
|
|||||||||||| |||||||||| |
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| T |
33813602 |
gggaccatctat-acatgggaat |
33813623 |
T |
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