View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11515_low_4 (Length: 543)

Name: NF11515_low_4
Description: NF11515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11515_low_4
NF11515_low_4
[»] chr3 (57 HSPs)
chr3 (204-543)||(19869000-19869339)
chr3 (204-427)||(25492036-25492259)
chr3 (206-543)||(27054888-27055230)
chr3 (487-543)||(20536628-20536684)
chr3 (487-543)||(2784139-2784195)
chr3 (487-543)||(4225896-4225952)
chr3 (487-543)||(9158006-9158062)
chr3 (487-539)||(42354456-42354508)
chr3 (487-542)||(10963426-10963481)
chr3 (487-542)||(10966935-10966990)
chr3 (487-543)||(2279663-2279719)
chr3 (487-543)||(18883231-18883287)
chr3 (204-317)||(20536337-20536452)
chr3 (487-543)||(25888513-25888569)
chr3 (487-543)||(30158072-30158128)
chr3 (487-542)||(10959919-10959974)
chr3 (487-543)||(4250403-4250459)
chr3 (487-543)||(6173396-6173452)
chr3 (487-543)||(18551686-18551742)
chr3 (487-543)||(28327461-28327517)
chr3 (487-543)||(28330786-28330842)
chr3 (253-414)||(22032373-22032535)
chr3 (204-265)||(3306147-3306209)
chr3 (497-543)||(9154833-9154879)
chr3 (209-282)||(26822048-26822120)
chr3 (373-542)||(26822189-26822358)
chr3 (208-288)||(30157805-30157885)
chr3 (499-543)||(5887040-5887084)
chr3 (499-543)||(5897024-5897068)
chr3 (204-320)||(11138574-11138688)
chr3 (204-320)||(22626316-22626430)
chr3 (499-543)||(23374785-23374829)
chr3 (487-543)||(36037000-36037056)
chr3 (208-315)||(46731585-46731691)
chr3 (497-543)||(54736183-54736230)
chr3 (258-336)||(35366486-35366562)
chr3 (204-265)||(4225621-4225681)
chr3 (487-531)||(3305879-3305923)
chr3 (499-543)||(16314645-16314689)
chr3 (499-543)||(16414811-16414855)
chr3 (499-543)||(18495639-18495683)
chr3 (499-543)||(18515785-18515829)
chr3 (499-543)||(29233644-29233687)
chr3 (210-261)||(31549573-31549625)
chr3 (204-247)||(5886751-5886794)
chr3 (204-247)||(5896735-5896778)
chr3 (204-247)||(6173117-6173160)
chr3 (204-247)||(16314357-16314400)
chr3 (204-247)||(16414523-16414566)
chr3 (204-247)||(18495351-18495394)
chr3 (204-247)||(23374497-23374540)
chr3 (294-336)||(18551895-18551937)
chr3 (495-543)||(11271075-11271122)
chr3 (208-288)||(13979643-13979722)
chr3 (204-288)||(28327720-28327802)
chr3 (204-288)||(28331045-28331127)
chr3 (212-272)||(35366573-35366632)
[»] chr5 (32 HSPs)
chr5 (207-531)||(1810197-1810521)
chr5 (204-543)||(2499766-2500109)
chr5 (204-336)||(21680586-21680717)
chr5 (204-327)||(33921333-33921455)
chr5 (206-543)||(33320685-33321025)
chr5 (204-320)||(34405975-34406090)
chr5 (208-543)||(9690780-9691117)
chr5 (208-543)||(36330741-36331074)
chr5 (395-531)||(35432442-35432579)
chr5 (487-543)||(26548111-26548167)
chr5 (487-543)||(26551670-26551726)
chr5 (370-542)||(36335037-36335210)
chr5 (487-543)||(2453300-2453356)
chr5 (487-543)||(3195111-3195167)
chr5 (487-543)||(19686187-19686243)
chr5 (487-543)||(28562404-28562460)
chr5 (487-543)||(28565972-28566028)
chr5 (487-543)||(34652800-34652856)
chr5 (292-543)||(26338000-26338256)
chr5 (487-543)||(19689570-19689626)
chr5 (487-543)||(40799961-40800017)
chr5 (208-282)||(14616437-14616510)
chr5 (487-543)||(4731876-4731932)
chr5 (501-543)||(17944668-17944710)
chr5 (208-320)||(7649950-7650060)
chr5 (204-247)||(26727252-26727295)
chr5 (487-531)||(20077653-20077697)
chr5 (292-335)||(35432330-35432373)
chr5 (210-243)||(20056160-20056193)
chr5 (204-320)||(15532204-15532318)
chr5 (204-320)||(15542386-15542500)
chr5 (225-288)||(19686443-19686506)
[»] chr7 (48 HSPs)
chr7 (207-543)||(6964304-6964644)
chr7 (204-543)||(38431410-38431753)
chr7 (206-543)||(3540930-3541269)
chr7 (204-320)||(6967274-6967389)
chr7 (204-320)||(17866357-17866472)
chr7 (208-543)||(16547020-16547359)
chr7 (208-543)||(16618303-16618642)
chr7 (204-282)||(17857884-17857962)
chr7 (208-347)||(17152173-17152310)
chr7 (487-543)||(22232672-22232728)
chr7 (487-543)||(22254011-22254067)
chr7 (487-543)||(22257275-22257331)
chr7 (487-543)||(8257905-8257961)
chr7 (487-543)||(20100661-20100717)
chr7 (487-543)||(23467213-23467269)
chr7 (487-542)||(5826753-5826808)
chr7 (487-541)||(42606302-42606356)
chr7 (406-543)||(26808694-26808831)
chr7 (487-543)||(748086-748142)
chr7 (487-543)||(2349476-2349532)
chr7 (487-543)||(8257632-8257688)
chr7 (487-543)||(11825400-11825456)
chr7 (487-543)||(43549210-43549266)
chr7 (487-543)||(8397862-8397918)
chr7 (373-543)||(26153168-26153342)
chr7 (487-543)||(26182319-26182375)
chr7 (501-543)||(22083502-22083544)
chr7 (204-265)||(709787-709847)
chr7 (209-322)||(28577687-28577798)
chr7 (499-543)||(2251888-2251932)
chr7 (499-543)||(23598820-23598864)
chr7 (499-543)||(26460482-26460526)
chr7 (208-296)||(36842945-36843032)
chr7 (487-543)||(44017837-44017893)
chr7 (204-247)||(2252177-2252220)
chr7 (204-247)||(23598532-23598575)
chr7 (208-282)||(24783573-24783646)
chr7 (249-322)||(17601877-17601950)
chr7 (499-543)||(710074-710118)
chr7 (438-542)||(28577913-28578017)
chr7 (205-320)||(294987-295101)
chr7 (208-247)||(20100950-20100989)
chr7 (495-542)||(42859008-42859054)
chr7 (487-525)||(30058196-30058234)
chr7 (210-247)||(26460771-26460808)
chr7 (487-543)||(6214420-6214476)
chr7 (204-336)||(9765912-9766042)
chr7 (204-288)||(23759613-23759696)
[»] chr1 (34 HSPs)
chr1 (204-543)||(34552442-34552785)
chr1 (210-543)||(18392409-18392747)
chr1 (204-345)||(49716589-49716731)
chr1 (204-333)||(49720083-49720213)
chr1 (206-543)||(6205897-6206239)
chr1 (204-320)||(10765046-10765161)
chr1 (204-320)||(13493389-13493504)
chr1 (206-288)||(50196721-50196803)
chr1 (487-543)||(17902833-17902889)
chr1 (487-543)||(50197004-50197060)
chr1 (487-542)||(28918393-28918448)
chr1 (487-542)||(49716391-49716446)
chr1 (487-542)||(49719873-49719928)
chr1 (487-543)||(33898343-33898399)
chr1 (208-320)||(13496114-13496224)
chr1 (487-543)||(20981377-20981433)
chr1 (487-543)||(23441329-23441385)
chr1 (487-543)||(37641885-37641941)
chr1 (476-543)||(20964474-20964540)
chr1 (499-543)||(16838991-16839035)
chr1 (499-543)||(16848921-16848965)
chr1 (204-247)||(17902557-17902600)
chr1 (204-247)||(20981665-20981708)
chr1 (499-542)||(24200301-24200344)
chr1 (487-543)||(3087770-3087826)
chr1 (225-317)||(16190203-16190295)
chr1 (208-247)||(24200017-24200056)
chr1 (204-247)||(37642167-37642210)
chr1 (487-525)||(5317893-5317931)
chr1 (204-266)||(32505861-32505922)
chr1 (210-247)||(16838709-16838746)
chr1 (210-247)||(16848639-16848676)
chr1 (206-246)||(14546487-14546527)
chr1 (213-281)||(15297492-15297559)
[»] scaffold0068 (1 HSPs)
scaffold0068 (204-336)||(33734-33865)
[»] chr8 (30 HSPs)
chr8 (204-346)||(9467283-9467425)
chr8 (204-543)||(39659716-39660058)
chr8 (204-347)||(453803-453947)
chr8 (225-543)||(13332106-13332428)
chr8 (204-543)||(5828044-5828387)
chr8 (487-543)||(20262573-20262629)
chr8 (487-543)||(21049203-21049259)
chr8 (487-543)||(27863599-27863655)
chr8 (487-543)||(14188019-14188075)
chr8 (487-543)||(18696020-18696076)
chr8 (487-543)||(22654280-22654336)
chr8 (487-543)||(30645491-30645547)
chr8 (487-542)||(31986294-31986349)
chr8 (487-543)||(5964274-5964330)
chr8 (206-317)||(12575306-12575416)
chr8 (487-537)||(31981372-31981422)
chr8 (499-543)||(17013089-17013133)
chr8 (499-543)||(24903541-24903585)
chr8 (204-247)||(24903254-24903297)
chr8 (487-525)||(453624-453662)
chr8 (209-265)||(5980067-5980124)
chr8 (487-543)||(587331-587387)
chr8 (487-543)||(626535-626591)
chr8 (499-543)||(17544068-17544112)
chr8 (204-243)||(17012801-17012840)
chr8 (204-243)||(17544361-17544400)
chr8 (204-246)||(22654570-22654612)
chr8 (243-336)||(12820690-12820782)
chr8 (210-243)||(17931296-17931329)
chr8 (487-531)||(31468169-31468213)
[»] chr2 (31 HSPs)
chr2 (204-347)||(29435965-29436109)
chr2 (206-543)||(38315807-38316148)
chr2 (218-349)||(13572059-13572192)
chr2 (368-542)||(40139140-40139314)
chr2 (487-543)||(4577842-4577898)
chr2 (487-543)||(11056359-11056415)
chr2 (487-543)||(29435768-29435824)
chr2 (208-317)||(23673353-23673461)
chr2 (487-539)||(1503478-1503530)
chr2 (487-539)||(1506682-1506734)
chr2 (487-543)||(11059817-11059873)
chr2 (487-543)||(15704015-15704071)
chr2 (487-543)||(15719319-15719375)
chr2 (204-282)||(36327090-36327167)
chr2 (486-543)||(30719792-30719849)
chr2 (204-317)||(32575689-32575801)
chr2 (487-543)||(13518321-13518377)
chr2 (208-296)||(16295048-16295135)
chr2 (487-543)||(18011961-18012016)
chr2 (487-543)||(40677817-40677873)
chr2 (496-543)||(38326319-38326366)
chr2 (499-543)||(18938911-18938955)
chr2 (204-297)||(24384929-24385023)
chr2 (204-336)||(32074160-32074293)
chr2 (499-543)||(22592531-22592575)
chr2 (204-247)||(18939200-18939243)
chr2 (204-247)||(22592819-22592862)
chr2 (487-521)||(25925175-25925209)
chr2 (487-528)||(40778988-40779029)
chr2 (204-320)||(31528517-31528631)
chr2 (204-288)||(40677532-40677614)
[»] chr4 (36 HSPs)
chr4 (204-543)||(13979151-13979493)
chr4 (208-543)||(15851190-15851529)
chr4 (204-332)||(33400079-33400207)
chr4 (204-543)||(19928897-19929238)
chr4 (206-320)||(647209-647322)
chr4 (206-282)||(650481-650557)
chr4 (206-347)||(37176855-37176993)
chr4 (487-543)||(18859796-18859852)
chr4 (487-543)||(10247833-10247889)
chr4 (487-539)||(11702632-11702684)
chr4 (476-531)||(10385963-10386018)
chr4 (487-542)||(17670331-17670386)
chr4 (487-543)||(23653292-23653348)
chr4 (487-543)||(26703536-26703592)
chr4 (499-543)||(3734330-3734374)
chr4 (204-320)||(12172099-12172214)
chr4 (499-543)||(14701923-14701967)
chr4 (499-543)||(49636581-49636625)
chr4 (499-543)||(49639874-49639918)
chr4 (204-247)||(3719265-3719308)
chr4 (495-542)||(39050602-39050649)
chr4 (204-317)||(2542012-2542124)
chr4 (225-282)||(21217359-21217416)
chr4 (373-474)||(21217499-21217600)
chr4 (499-543)||(3719553-3719597)
chr4 (204-265)||(8871474-8871537)
chr4 (487-543)||(11560831-11560886)
chr4 (208-317)||(26062698-26062808)
chr4 (204-247)||(3734619-3734662)
chr4 (204-247)||(14702212-14702255)
chr4 (246-317)||(24605051-24605121)
chr4 (204-247)||(49639586-49639629)
chr4 (506-543)||(33400392-33400429)
chr4 (204-278)||(48013158-48013233)
chr4 (487-543)||(7394916-7394971)
chr4 (211-247)||(11561123-11561159)
[»] chr6 (47 HSPs)
chr6 (204-336)||(11410990-11411123)
chr6 (204-543)||(12746826-12747169)
chr6 (245-543)||(35026932-35027234)
chr6 (206-333)||(33678947-33679076)
chr6 (204-543)||(28894239-28894582)
chr6 (204-320)||(14790745-14790860)
chr6 (204-320)||(14795773-14795888)
chr6 (487-543)||(34502360-34502416)
chr6 (487-542)||(3826863-3826918)
chr6 (487-543)||(5618262-5618318)
chr6 (487-543)||(7560144-7560200)
chr6 (487-543)||(11410782-11410838)
chr6 (487-539)||(13095764-13095816)
chr6 (487-543)||(17231873-17231929)
chr6 (487-543)||(31123450-31123506)
chr6 (487-542)||(15578960-15579015)
chr6 (487-543)||(2331299-2331355)
chr6 (487-543)||(9313830-9313886)
chr6 (487-543)||(28117857-28117913)
chr6 (487-543)||(33679234-33679290)
chr6 (204-247)||(2331588-2331631)
chr6 (208-317)||(19664674-19664782)
chr6 (208-265)||(22221903-22221959)
chr6 (208-265)||(22247738-22247794)
chr6 (208-320)||(1838602-1838712)
chr6 (487-543)||(14966248-14966304)
chr6 (487-543)||(14969728-14969784)
chr6 (249-317)||(15535184-15535252)
chr6 (292-336)||(15578763-15578807)
chr6 (487-543)||(17696608-17696664)
chr6 (210-265)||(23842565-23842621)
chr6 (204-247)||(22920835-22920878)
chr6 (502-543)||(22920546-22920587)
chr6 (487-528)||(26390970-26391011)
chr6 (487-543)||(2330647-2330703)
chr6 (487-531)||(6856612-6856656)
chr6 (499-543)||(7560232-7560276)
chr6 (499-543)||(11296195-11296239)
chr6 (204-320)||(13017193-13017307)
chr6 (210-265)||(23848073-23848129)
chr6 (208-288)||(27649259-27649338)
chr6 (204-247)||(17232161-17232204)
chr6 (204-288)||(28974140-28974226)
chr6 (208-296)||(17696849-17696936)
chr6 (204-317)||(32427429-32427540)
chr6 (495-531)||(28974433-28974469)
chr6 (225-288)||(34502614-34502677)
[»] scaffold0273 (1 HSPs)
scaffold0273 (206-543)||(19515-19857)
[»] scaffold0401 (1 HSPs)
scaffold0401 (204-543)||(4276-4619)
[»] scaffold0043 (3 HSPs)
scaffold0043 (206-541)||(13611-13950)
scaffold0043 (206-347)||(11467-11607)
scaffold0043 (487-526)||(5631-5670)
[»] scaffold0045 (1 HSPs)
scaffold0045 (208-335)||(90306-90432)
[»] scaffold0083 (3 HSPs)
scaffold0083 (204-448)||(42716-42961)
scaffold0083 (487-543)||(29339-29395)
scaffold0083 (487-543)||(53136-53192)
[»] scaffold0360 (2 HSPs)
scaffold0360 (487-543)||(2471-2527)
scaffold0360 (487-543)||(6303-6359)
[»] scaffold0007 (1 HSPs)
scaffold0007 (395-543)||(92450-92601)
[»] scaffold0352 (1 HSPs)
scaffold0352 (208-317)||(2627-2734)
[»] scaffold0062 (2 HSPs)
scaffold0062 (487-543)||(52927-52983)
scaffold0062 (487-543)||(67876-67932)
[»] scaffold0014 (1 HSPs)
scaffold0014 (487-542)||(228652-228707)
[»] scaffold0214 (3 HSPs)
scaffold0214 (487-543)||(20073-20129)
scaffold0214 (487-543)||(13624-13679)
scaffold0214 (487-543)||(27640-27695)
[»] scaffold0766 (1 HSPs)
scaffold0766 (239-317)||(3635-3713)
[»] scaffold0002 (1 HSPs)
scaffold0002 (395-523)||(468418-468544)
[»] scaffold0175 (2 HSPs)
scaffold0175 (204-247)||(28428-28471)
scaffold0175 (487-543)||(28704-28760)
[»] scaffold0012 (2 HSPs)
scaffold0012 (204-247)||(26647-26690)
scaffold0012 (499-543)||(26935-26979)
[»] scaffold0264 (1 HSPs)
scaffold0264 (208-282)||(24193-24266)
[»] scaffold0134 (1 HSPs)
scaffold0134 (502-543)||(7255-7296)
[»] scaffold1048 (1 HSPs)
scaffold1048 (499-543)||(1419-1463)
[»] scaffold1431 (1 HSPs)
scaffold1431 (487-530)||(475-518)
[»] scaffold0067 (1 HSPs)
scaffold0067 (210-247)||(27668-27705)


Alignment Details
Target: chr3 (Bit Score: 264; Significance: 1e-147; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 204 - 543
Target Start/End: Complemental strand, 19869339 - 19869000
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19869339 agatatttggcaagtgtactaaaatctatcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 19869240  T
Q  304 ggatgtagtaaatttatgggttgctctaggcagctgaatttggtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacaga 403  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19869239 ggatgtagtaaatttatgggttgccttaggcagctgaatttggtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacata 19869140  T
Q  404 taatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaactaaatagtttt 503  Q
    ||||||||||||||||||||||||||||| | ||||||||||| ||  |||||| ||| |||||||||||||||||||| |  |||||||||||||||||    
T  19869139 taatcaagcctttgaatcctctattgttcacggtgaataattttctcatcttctctctcaatgttcacctaactctatgacggattaactaaatagtttt 19869040  T
Q  504 gatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  19869039 gatcaatctcttgactcaaaactctttcctaagttataac 19869000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 204 - 427
Target Start/End: Complemental strand, 25492259 - 25492036
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||| ||| |||||||||||||| ||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  25492259 agataattgacaagtgtaccaaaagctatcaaaatagtaataaagttcgtatccacgaggatcgttgttaatttctacttagcaagttcattaaaataaa 25492160  T
Q  304 ggatgtagtaaatttatgggttgctctaggcagctgaatttggtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacaga 403  Q
     ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25492159 agatgtagtaaatttatgggttgccctaggcacctgaatttggtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacaga 25492060  T
Q  404 taatcaagcctttgaatcctctat 427  Q
    |||||||| |||||||||||||||    
T  25492059 taatcaagtctttgaatcctctat 25492036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 206 - 543
Target Start/End: Complemental strand, 27055230 - 27054888
Alignment:
Q  206 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 305  Q
    ||||||||||||  |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27055230 atatttggcaagcataccaaaa-ctatcgaagtagtaataaatttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaag 27055132  T
Q  306 atgtagtaaa-tttat-gggttgctctaggcagctgaatttg-gtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacag 402  Q
    |||||||||| ||||| ||||||| |||||||| || |||||  |  |||||| |||||  | |  ||| |||| | |||||  | ||  | ||||||||    
T  27055131 atgtagtaaattttatggggttgccctaggcagttggatttgattttataaaacgtaaa-caaagtcaa-taaaatagtttgataattggattaaaacag 27055034  T
Q  403 ataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaata 498  Q
    || ||||||||||| ||||||||||||| || |||||| |||||||    |||||| ||| || |   || ||||| || || | || ||||||||| |     
T  27055033 atgatcaagcctttcgaatcctctattgctcaccgtgagtaatttggctctcttctctctcaaagaaattaacctagctttacgacaaattaactaagtg 27054934  T
Q  499 gttttgatcaatctcttgactc-aaaaccctttcttaagttataac 543  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||    
T  27054933 gttttgatcaatctcttgactcaaaaaccctttcctaagttataac 27054888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 20536628 - 20536684
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20536628 attaactaaatagttttgatcaatctcttgactcaaaaccctttcctaagttataac 20536684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 2784195 - 2784139
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  2784195 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataac 2784139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 4225896 - 4225952
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  4225896 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataac 4225952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 9158062 - 9158006
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  9158062 attaactaattagttttgatcaatctcttgactcaaaaccctttcttaatttataac 9158006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 539
Target Start/End: Original strand, 42354456 - 42354508
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagtta 539  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42354456 attaactaattagttttgatcaatctcttgactcaaaaccctttcttaagtta 42354508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 10963481 - 10963426
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  10963481 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataa 10963426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 10966990 - 10966935
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  10966990 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataa 10966935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 2279663 - 2279719
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  2279663 attaactaagtagttttgatcaatctcttgaatcaaaaccctttcctaagttataac 2279719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 18883287 - 18883231
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  18883287 attaactaattaattttgatcaatctcttgactcaaaaccctttcctaagttataac 18883231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 20536337 - 20536452
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaat--aaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaata 301  Q
    |||||||||| |||||||||||||||||| ||| ||||||   |||| |||||||||||||||| ||  |||| |||||||||| || ||| |||  | |    
T  20536337 agatatttggaaagtgtaccaaaaactattgaagtagtaaataaaagatcgtatccacgaggactgtatttaacttctacttagaaatttcattattaaa 20536436  T
Q  302 aaggatgtagtaaatt 317  Q
    ||||||||||||||||    
T  20536437 aaggatgtagtaaatt 20536452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 25888513 - 25888569
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||    
T  25888513 attaactaagtagttttgatcaatctcttgactcaaaaccatttcctaagttataac 25888569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 30158072 - 30158128
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  30158072 attaactaagtagatttgatcaatctcttgactcaaaaccctttcctaagttataac 30158128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 10959974 - 10959919
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  10959974 attaattaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataa 10959919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 4250459 - 4250403
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | |||||||||||||||||||||||||||||||||  ||||||||||    
T  4250459 attaactaagtggttttgatcaatctcttgactcaaaaccctttccgaagttataac 4250403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 6173396 - 6173452
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  6173396 attatctaagtagttttgatcaatctcttgaatcaaaaccctttcctaagttataac 6173452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 18551742 - 18551686
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | |||||||||||||||||| |||||||||||||| |||||||||||    
T  18551742 attaactaagtggttttgatcaatctcttgtctcaaaaccctttcctaagttataac 18551686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 28327517 - 28327461
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| |||||||||||    
T  28327517 attaactaagtggttttgatcaatctcttgacacaaaaccctttcctaagttataac 28327461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 28330842 - 28330786
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| |||||||||||    
T  28330842 attaactaagtggttttgatcaatctcttgacacaaaaccctttcctaagttataac 28330786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 414
Target Start/End: Original strand, 22032373 - 22032535
Alignment:
Q  253 tatccacgaggaccgttgttaatttcta-cttagcaagttcgttaaaataaaggatgtagtaaattt-atgggttgctctaggcagctgaatttggtgca 350  Q
    |||||||||||||  ||||||| || || || | ||| ||||||||||||| |||| || ||||||| || | |||| ||||||||   |||||||||||    
T  22032373 tatccacgaggactattgttaagttttaactcaacaatttcgttaaaataa-ggatataataaattttatagtttgccctaggcagtcaaatttggtgca 22032471  T
Q  351 taaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagataatcaagcct 414  Q
    ||||||||||||   | |||||||| |||||||| |||||||| ||||||| || || ||||||    
T  22032472 taaaatgtaaatagaacgcaattaacttggtttgaaatttatactaaaacatatgattaagcct 22032535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 3306209 - 3306147
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagt-aataaagttcgtatccacgaggac 265  Q
    |||||||||||||||||||||| |||||||||| || | ||| ||||||||||||||||||||    
T  3306209 agatatttggcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggac 3306147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 497 - 543
Target Start/End: Complemental strand, 9154879 - 9154833
Alignment:
Q  497 tagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||    
T  9154879 tagttttgatcaatctcttgactcaaaatcctttcctaagttataac 9154833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 26822048 - 26822120
Alignment:
Q  209 tttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 282  Q
    ||||| ||||||||||||| |||||||| || ||||||| ||||||||||| ||||||| ||||||||| ||||    
T  26822048 tttggaaagtgtaccaaaa-ctatcgaagtaataataaaattcgtatccacaaggaccgctgttaatttttact 26822120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 542
Target Start/End: Original strand, 26822189 - 26822358
Alignment:
Q  373 taaattggtttggaatttataataaaacagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacc 472  Q
    ||||||||||||  | ||| | ||||| | || ||||||||||  |||| |||||||  | | ||||||||||||||  |||||| ||| ||||||||||    
T  26822189 taaattggtttgagaattagattaaaataaatgatcaagccttcaaatcatctattgcacactgtgaataatttgctcctcttctttctcaatgttcacc 26822288  T
Q  473 taactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||  | ||   |  ||||||  |||||||||||||||| |||||| ||||||| ||||| ||||||||||    
T  26822289 tagttttacaactgattaacctaatagttttgatcaatttcttgagtcaaaactctttcctaagttataa 26822358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 288
Target Start/End: Original strand, 30157805 - 30157885
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagt-aataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 288  Q
    |||||||||||||||||| |||||||||| || | ||| |||||||||||||||||||| | ||||||| || |||||||||    
T  30157805 atttggcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggactg-tgttaatctcaacttagcaa 30157885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 5887040 - 5887084
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  5887040 gttttgatcaatctcttgaatcaaaaccctttcctaagttataac 5887084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 5897024 - 5897068
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  5897024 gttttgatcaatctcttgaatcaaaaccctttcctaagttataac 5897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 11138574 - 11138688
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||| ||||||  | |||||| || ||| ||||||||| ||||||||||| ||  |||| ||||||||||||| ||| |||  | |||    
T  11138574 agatatttggcaagtgaaccaaattcgatcgaagtaataa-aaagttcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaa 11138672  T
Q  304 ggatgtagtaaatttat 320  Q
    ||||||| |||||||||    
T  11138673 ggatgta-taaatttat 11138688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 22626316 - 22626430
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||| ||||||  | |||||| || ||| ||||||||| ||||||||||| ||  |||| ||||||||||||| ||| |||  | |||    
T  22626316 agatatttggcaagtgaaccaaattcgatcgaagtaataa-aaagttcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaa 22626414  T
Q  304 ggatgtagtaaatttat 320  Q
    ||||||| |||||||||    
T  22626415 ggatgta-taaatttat 22626430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 23374785 - 23374829
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  23374785 gttttgatcaatctcttgaatcaaaaccctttcctaagttataac 23374829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 36037000 - 36037056
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||| || ||||||||    
T  36037000 attaacttattagctttgatcaatctcttgactcaaaaccctttcctaggttataac 36037056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 46731691 - 46731585
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagt-aataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagga 306  Q
    |||||||||||| || ||||||||||||| || | |||||| || ||||||||||||||||||||||| ||||||| ||||| ||| |||  | ||||||    
T  46731691 atttggcaagtgaac-aaaaactatcgaagtaatgaataaattt-gtatccacgaggaccgttgttaacttctactcagcaatttctttatcaaaaagga 46731594  T
Q  307 tgtagtaaa 315  Q
    |||| ||||    
T  46731593 tgtattaaa 46731585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 497 - 543
Target Start/End: Original strand, 54736183 - 54736230
Alignment:
Q  497 tagttttgatcaatctcttgactc-aaaaccctttcttaagttataac 543  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  54736183 tagttttgatcaatctcttgactcaaaaaccctttcctaagttataac 54736230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 35366562 - 35366486
Alignment:
Q  258 acgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatttatgggttgctctaggcag 336  Q
    ||||||||||||||||| ||||||||||||| ||| ||| || |||||||||| ||||||| | |||||| ||||||||    
T  35366562 acgaggaccgttgttaacttctacttagcaatttcattataa-aaaggatgtattaaattt-taggttgccctaggcag 35366486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 4225621 - 4225681
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggac 265  Q
    |||||||||||||||||||| || ||||||||| ||||||||||| | ||||||| ||||||    
T  4225621 agatatttggcaagtgtacc-aatactatcgaagtagtaataaagattgtatccatgaggac 4225681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 531
Target Start/End: Complemental strand, 3305923 - 3305879
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttc 531  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||    
T  3305923 attaactaagtggttttgatcaatctcttgacacaaaaccctttc 3305879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 16314645 - 16314689
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| |||||||||| || |||||||||||    
T  16314645 gttttgatcaatctcttgaatcaaaaccctatcctaagttataac 16314689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 16414811 - 16414855
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||||    
T  16414811 gtttttatcaatctcttgaatcaaaaccctttcctaagttataac 16414855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 18495639 - 18495683
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| |||||||||| || |||||||||||    
T  18495639 gttttgatcaatctcttgaatcaaaaccctatcctaagttataac 18495683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 18515785 - 18515829
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||||    
T  18515785 gtttttatcaatctcttgaatcaaaaccctttcctaagttataac 18515829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 29233644 - 29233687
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  29233644 gttttgatcaatctcttgagtcaaaaccctttc-taagttataac 29233687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 31549625 - 31549573
Alignment:
Q  210 ttggcaagtgtaccaaaaactatcgaattagtaata-aagttcgtatccacga 261  Q
    ||||||||||||||||||||||||||| || ||| | ||||||||||||||||    
T  31549625 ttggcaagtgtaccaaaaactatcgaagtaataaaataagttcgtatccacga 31549573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 5886751 - 5886794
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||    
T  5886751 agataattggcaagtgtaccaataactatcgaagtagtaataaa 5886794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 5896735 - 5896778
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||    
T  5896735 agataattggcaagtgtaccaataactatcgaagtagtaataaa 5896778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 6173117 - 6173160
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||    
T  6173117 agatagttggcaagtgtaccaataactatcgaagtagtaataaa 6173160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 16314357 - 16314400
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||    
T  16314357 agatatttggcaagtgtaccaataactatggaagtagtaataaa 16314400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 16414523 - 16414566
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||    
T  16414523 agatatttggcaagtgtaccaataactatggaagtagtaataaa 16414566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 18495351 - 18495394
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||    
T  18495351 agatatttggcaagtgtaccaataactatggaagtagtaataaa 18495394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 23374497 - 23374540
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||    
T  23374497 agataattggcaagtgtaccaataactatcgaaatagtaataaa 23374540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 336
Target Start/End: Complemental strand, 18551937 - 18551895
Alignment:
Q  294 ttaaaataaaggatgtagtaaatttatgggttgctctaggcag 336  Q
    ||||||| ||||||||  |||||||||||||||||||||||||    
T  18551937 ttaaaattaaggatgtgttaaatttatgggttgctctaggcag 18551895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 543
Target Start/End: Complemental strand, 11271122 - 11271075
Alignment:
Q  495 aatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||||||||||||||| || | ||||||||||||| |||||||||||    
T  11271122 aatagttttgatcaatct-ttaagtcaaaaccctttcctaagttataac 11271075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 13979722 - 13979643
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 288  Q
    |||||||||||| ||||||| |||||||| || |||  ||  ||| |||||||||||| | |||||||||||||| |||||    
T  13979722 atttggcaagtgaaccaaaa-ctatcgaagtaataaataaaatcgaatccacgaggactgctgttaatttctactcagcaa 13979643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 28327802 - 28327720
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 288  Q
    ||||| |||||||||||||||| |||||||||| |||||| |||  ||||  |||||||||| | |||||||||| | |||||||    
T  28327802 agataattggcaagtgtaccaataactatcgaagtagtaa-aaatatcgttcccacgaggactg-tgttaatttcaatttagcaa 28327720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 28331127 - 28331045
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 288  Q
    ||||| |||||||||||||||| |||||||||| |||||| |||  ||||  |||||||||| | |||||||||| | |||||||    
T  28331127 agataattggcaagtgtaccaataactatcgaagtagtaa-aaatatcgttcccacgaggactg-tgttaatttcaatttagcaa 28331045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 35366632 - 35366573
Alignment:
Q  212 ggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgtt 272  Q
    ||||||||||||||||   |||||| || || ||||| |||||||||||||||||||||||    
T  35366632 ggcaagtgtaccaaaata-atcgaagtaatattaaagatcgtatccacgaggaccgttgtt 35366573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 261; Significance: 1e-145; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 207 - 531
Target Start/End: Original strand, 1810197 - 1810521
Alignment:
Q  207 tatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagga 306  Q
    |||||| |||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1810197 tatttgacaagtgtaccaaaagctatcgaagtagtaataaagttcgtattcacgaggaccgttgttaatttctacttaacaagttcgttaaaataaagga 1810296  T
Q  307 tgtagtaaatttatgggttgctctaggcagctgaatttggtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagataa 406  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1810297 tgtagtaaatttatgggttgccctaggcagctgaatttggtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagataa 1810396  T
Q  407 tcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaactaaatagttttgat 506  Q
    ||||||||||||||||||||| |||| ||||||||||||||||  | |||||||| |||||||||||||||||| | |  ||||||||||||||||||||    
T  1810397 tcaagcctttgaatcctctatcgttcaccgtgaataatttgctccttttctatctcaatgttcacctaactctacgacggattaactaaatagttttgat 1810496  T
Q  507 caatctcttgactcaaaaccctttc 531  Q
    |||||||||||||||||||||||||    
T  1810497 caatctcttgactcaaaaccctttc 1810521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 204 - 543
Target Start/End: Original strand, 2499766 - 2500109
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2499766 agatatttggcaagtgtaccaaaagatatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 2499865  T
Q  304 ggatgtagtaaatttatgggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacag 402  Q
    |||||||||||||||||||||||| ||| |||| || |||||| |||||||||  | |||   | | || |||| |||||||  | ||  | ||||| ||    
T  2499866 ggatgtagtaaatttatgggttgccctaagcagttggatttggttgcataaaa-cttaatacaaagtaaataaaatggtttgataattggattaaaatag 2499964  T
Q  403 ataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaata 498  Q
    || |||||||||||  |||||||||||| || | |||| ||||||||   |||||| ||| || |   || |||||  |||| | || ||||||||| |     
T  2499965 atgatcaagcctttcaaatcctctattgctcacagtgagtaatttgcctctcttctctctcaaagaaattaacctaggtctacgacaaattaactaagtg 2500064  T
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  2500065 gttttgatcaatctcttgactcaaaaccctttcataagttataac 2500109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 204 - 336
Target Start/End: Complemental strand, 21680717 - 21680586
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21680717 agatatttggcaagtgtaccaaaa-ctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 21680619  T
Q  304 ggatgtagtaaatttatgggttgctctaggcag 336  Q
    ||||||| |||||||||||||||| ||||||||    
T  21680618 ggatgtactaaatttatgggttgccctaggcag 21680586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 204 - 327
Target Start/End: Complemental strand, 33921455 - 33921333
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  33921455 agatattcggcaagtgtaccaaaa-ctatcgaagtagtaataaagttcgtatccacgaggaccgttgtgaatttctacttagcaagttcgttaaaattaa 33921357  T
Q  304 ggatgtagtaaatttatgggttgc 327  Q
    ||||||| ||||||||||||||||    
T  33921356 ggatgtattaaatttatgggttgc 33921333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 206 - 543
Target Start/End: Original strand, 33320685 - 33321025
Alignment:
Q  206 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 305  Q
    |||||||||||||||||||||| |||||||| || |||||||||||||||||||  |||| | | | ||||||||||  ||||   ||||||||||||||    
T  33320685 atatttggcaagtgtaccaaaagctatcgaagtaataataaagttcgtatccacagggactgct-tcaatttctactcggcaaaagcgttaaaataaagg 33320783  T
Q  306 atgtagtaaatttatgggttgctctaggcagctgaatttggt-gcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagat 404  Q
    ||||| |||||||||||||  | ||||||| ||| ||||||| |||  ||| |||||| | | | || |||| |||||||  | ||  | ||||||  ||    
T  33320784 atgtattaaatttatgggtcaccctaggcaactggatttggttgcaataaaagtaaataaca-gaaaataaaatggtttgataattggattaaaactaat 33320882  T
Q  405 aatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagt 500  Q
     ||||||||||| ||||||||||||| ||   |||| ||||||||   |||||| ||| || |   || ||||| || || | |  ||||||||| | ||    
T  33320883 tatcaagcctttcgaatcctctattgctcattgtgagtaatttgcctctcttctctctcaaagaaattaacctagctttacgacggattaactaagtggt 33320982  T
Q  501 tttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  33320983 tttgatcaatctcttgactcaaaaccctttcctaagttataac 33321025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 34406090 - 34405975
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||  |||| ||| |||  | |||    
T  34406090 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggaccgttgttaatttctactcggcaatttctttatcaaaaa 34405991  T
Q  304 ggatgtagtaaatttat 320  Q
    ||||||| |||||||||    
T  34405990 ggatgta-taaatttat 34405975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 208 - 543
Target Start/End: Complemental strand, 9691117 - 9690780
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 307  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||   ||  ||| | ||||||||||  ||||   ||||||||||||||||    
T  9691117 atttggcaagtgtaccaaaacc-atcgaagtagtaataaagttcgtatccacagagattgtt-tcaatttctactcggcaaaagcgttaaaataaaggat 9691020  T
Q  308 gtagtaaatttatgggttgctctaggcagctgaatttggt-gca-taaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagata 405  Q
    ||| |||||||||||||||| |||||||| |  || || | ||| ||||| |||||| | | | || |||| |||||||  | ||  | ||||||||||     
T  9691019 gtattaaatttatgggttgccctaggcagtttgatctgattgcaataaaaagtaaataaca-gaaaataaaatggtttgataattggattaaaacagatg 9690921  T
Q  406 atcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagtt 501  Q
    ||||||||||| ||||||||||||| || | |||| ||||||||   |||||| ||| ||     || ||||| || || | |  ||||||||| | |||    
T  9690920 atcaagcctttcgaatcctctattgctcactgtgagtaatttgcctttcttctctctcaaataaattaacctagct-tacgacggattaactaagtggtt 9690822  T
Q  502 ttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  9690821 ttgatcaatctcttgactcaaaaccctttcctaagttataac 9690780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 208 - 543
Target Start/End: Complemental strand, 36331074 - 36330741
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 307  Q
    ||||| |||||||||| ||  |||||||| || ||||||| || | ||||||||||||||||||||||||||||| | ||| || |||||  ||||||||    
T  36331074 atttgacaagtgtacctaat-ctatcgaagtaataataaaatttgcatccacgaggaccgttgttaatttctactcaacaattttgttaacttaaaggat 36330976  T
Q  308 gtagtaaatttatgggttgctctaggcagctgaatttggtgcataaaatgtaaatgaga-tgcaattaaattggtttggaatttataataaaacagataa 406  Q
     |  ||||||    |||||| |||||||| || ||  | ||||| |||  |  || | |  | ||||||||||||||| || ||| | |||||||||| |    
T  36330975 atgttaaattgggtggttgcactaggcagttggatcggttgcattaaactt--attacacggtaattaaattggtttgaaaattagattaaaacagatga 36330878  T
Q  407 tcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaactaaatagttttgat 506  Q
     ||| | || ||||||||| |||  | | ||||||||||||||  |||||| ||| ||||||||||||||| || | |  ||||||  ||||||||||||    
T  36330877 acaaactttcgaatcctctgttgcgcactgtgaataatttgctcctcttctctctcaatgttcacctaactttacgacggattaacctaatagttttgat 36330778  T
Q  507 caatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||| ||||||||||||  |||| |||||||||||    
T  36330777 caatcttttgactcaaaactatttcctaagttataac 36330741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 395 - 531
Target Start/End: Original strand, 35432442 - 35432579
Alignment:
Q  395 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaact 493  Q
    |||||||||| ||||||||||| ||||| ||||||| || ||||||||||||||||  ||||   ||| ||||| ||||||||| || | |  |||||||    
T  35432442 taaaacagatgatcaagcctttcgaatcatctattgctcaccgtgaataatttgctcctctttgctctcaatgtccacctaactttacgacggattaact 35432541  T
Q  494 aaatagttttgatcaatctcttgactcaaaaccctttc 531  Q
     | |||||||||||||||||||||||||||| ||||||    
T  35432542 tattagttttgatcaatctcttgactcaaaatcctttc 35432579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 26548167 - 26548111
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26548167 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaagttataac 26548111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 26551726 - 26551670
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26551726 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaagttataac 26551670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 542
Target Start/End: Original strand, 36335037 - 36335210
Alignment:
Q  370 aattaaattggtttggaatttataataaaa-cagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgtt 468  Q
    ||||||||||||||| || ||| | ||||| ||||| |||||||||| |||||||| | ||| |   ||||||||||| ||  |||||| ||| ||||||    
T  36335037 aattaaattggtttgaaaattagattaaaaacagatgatcaagccttcgaatcctcaagtgtgcattgtgaataattttctcatcttctctctcaatgtt 36335136  T
Q  469 cacctaactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    |||||| || || |     |||||  |||||||||||| |||||||||||||||||||||||| ||||||||||    
T  36335137 cacctagctttacgatgatttaacctaatagttttgataaatctcttgactcaaaaccctttcctaagttataa 36335210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 2453356 - 2453300
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  2453356 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataac 2453300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 3195167 - 3195111
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  3195167 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataac 3195111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 19686243 - 19686187
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  19686243 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataac 19686187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 28562404 - 28562460
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  28562404 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataac 28562460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 28565972 - 28566028
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  28565972 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataac 28566028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 34652800 - 34652856
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  34652800 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataac 34652856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 292 - 543
Target Start/End: Complemental strand, 26338256 - 26338000
Alignment:
Q  292 cgttaaaataaaggatgtagtaaatttatgggttgctctaggcagctgaatttggt-gca-taaaatgtaaatgagatgcaattaaattggtttggaatt 389  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||| || ||||||| ||| ||||| |||||| | | | || |||| |||||||  | |    
T  26338256 cgttagaataaaggatgtattaaatttatgggttgccctaggcagttggatttggttgcaataaaaagtaaataaca-gaaaataaaatggtttgataat 26338158  T
Q  390 tataataaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgt---tcacctaactctatggca 485  Q
    |  | |||||||||| ||||||||||| ||||||||||||| || | |||| ||||||||   |||| | ||| || |    | |||||  | || | |     
T  26338157 tggattaaaacagatgatcaagcctttcgaatcctctattgctcactgtgagtaatttgcctctcttatctctcaaagaaaataacctaggtttacgacg 26338058  T
Q  486 tattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
     ||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||    
T  26338057 gattaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataac 26338000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 19689626 - 19689570
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||    
T  19689626 attaactaattagttttgatcaatctcttgactcaaaaccctttactaagttataac 19689570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 40799961 - 40800017
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  40799961 attaactaagtagttttgatcaatctcttaactcaaaaccctttcctaagttataac 40800017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 14616437 - 14616510
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 282  Q
    |||||||||||| ||||||| |||||||| || |||  || ||||||||||||||||||||||||||||||||||    
T  14616437 atttggcaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctact 14616510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 4731876 - 4731932
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||||| |||||||||||    
T  4731876 attaattaagtagttttgatcaatctcttgactcaaaactctttcctaagttataac 4731932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 501 - 543
Target Start/End: Complemental strand, 17944710 - 17944668
Alignment:
Q  501 tttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  17944710 tttgatcaatctcttgactcaaaaccctttcctaagttataac 17944668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 320
Target Start/End: Original strand, 7649950 - 7650060
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 307  Q
    ||||| |||||| ||||||| |||||||| || |||  || ||||||| |||||||||||||||||||||||||| | ||| ||| |||  | |||||||    
T  7649950 atttgacaagtgaaccaaaa-ctatcgaagtaataaataaattcgtattcacgaggaccgttgttaatttctactcaacaatttctttatcaaaaaggat 7650048  T
Q  308 gtagtaaatttat 320  Q
    ||| |||||||||    
T  7650049 gta-taaatttat 7650060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 26727295 - 26727252
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  26727295 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 26727252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 531
Target Start/End: Complemental strand, 20077697 - 20077653
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttc 531  Q
    |||||| |||||||||||||||||||||||| |||||||| ||||    
T  20077697 attaacaaaatagttttgatcaatctcttgaatcaaaaccttttc 20077653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 35432330 - 35432373
Alignment:
Q  292 cgttaaaataaaggatgtagtaaatttatgggttgctctaggca 335  Q
    |||||||||||| |||||| |||||||||||||||| |||||||    
T  35432330 cgttaaaataaatgatgtattaaatttatgggttgccctaggca 35432373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 20056193 - 20056160
Alignment:
Q  210 ttggcaagtgtaccaaaaactatcgaattagtaa 243  Q
    ||||||||||||||||||||||||||| ||||||    
T  20056193 ttggcaagtgtaccaaaaactatcgaagtagtaa 20056160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 15532204 - 15532318
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||| ||| ||||||  | |||||| || ||| ||| ||||| ||||||||||| ||  |||| ||||||||||||| ||| |||  | |||    
T  15532204 agatatttggcatgtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaa 15532302  T
Q  304 ggatgtagtaaatttat 320  Q
    ||||||| |||||||||    
T  15532303 ggatgta-taaatttat 15532318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 15542386 - 15542500
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||| ||||||  | |||||| || ||| ||| ||||| ||||||||||| ||  |||| ||||||||| ||| ||| |||  | |||    
T  15542386 agatatttggcaagtgaaccaaattcgatcgaagtaataa-aaaattcgtttccacgaggactgtatttaacttctacttaacaatttcattattaaaaa 15542484  T
Q  304 ggatgtagtaaatttat 320  Q
    ||||||| |||||||||    
T  15542485 ggatgta-taaatttat 15542500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 19686506 - 19686443
Alignment:
Q  225 aaaactatcgaattagtaata-aagttcgtatccacgaggaccgttgttaatttctacttagcaa 288  Q
    |||||||||||| |||||| | |||||||||||||||||||| | ||||||| || |||||||||    
T  19686506 aaaactatcgaagtagtaaaataagttcgtatccacgaggactg-tgttaatctcaacttagcaa 19686443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 2e-63; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 207 - 543
Target Start/End: Complemental strand, 6964644 - 6964304
Alignment:
Q  207 tatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagga 306  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6964644 tatttggtaagtgtaccaaaaactatcgaagtagtaatgaagttcgtatccacgagggccgttgttaatttctacttagcaagttcgttaaaataaagga 6964545  T
Q  307 tgtagtaaatttatgggttgctctaggcagctgaatttggt-gcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagata 405  Q
    ||||||||||||||||||||| ||||| || || ||||||| ||||||||  | |||   | | || |||| |||||||  | ||  | ||||||||||     
T  6964544 tgtagtaaatttatgggttgccctaggtagttggatttggtcgcataaaa-cttaatacaaagtaaataaaatggtttgataattggattaaaacagatg 6964446  T
Q  406 atcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagtt 501  Q
    ||||||||||| ||||||||||||| || | |||| ||||||||   |||||| ||| || |   || ||||| || || | || | ||||||| | |||    
T  6964445 atcaagcctttcgaatcctctattgctcacagtgagtaatttgcctctcttctctctcaaagaaattaacctagctttacgacaaaataactaagtggtt 6964346  T
Q  502 ttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  6964345 ttgatcaatctcttgactcaaaatcctttcctaagttataac 6964304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 204 - 543
Target Start/End: Complemental strand, 38431753 - 38431410
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  38431753 agatatttggaaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccatgaggaccgttgttaatttctacttagcaagttagttaaaataaa 38431654  T
Q  304 ggatgtagtaaatttatgggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacag 402  Q
    |||||||||||||||||||||||| |||||||| || |||||| |||||||||  | |||   | | || |||| |||||||  | ||| | ||||||||    
T  38431653 ggatgtagtaaatttatgggttgccctaggcagttggatttggttgcataaaa-cttaatataaagtaaataaaatggtttgataattagattaaaacag 38431555  T
Q  403 ataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaata 498  Q
    || ||||||||||| ||||||||||||| || | |||  |||||| |   |||||| ||| || |   || ||||| || || | || ||||||||| |     
T  38431554 atgatcaagcctttcgaatcctctattgctcacagtgggtaattttcctctcttctctctcaaagaaattaacctagctttacgacaaattaactaagtg 38431455  T
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||||||||||||||||||||||||| |||| | |||||||||    
T  38431454 gttttgatcaatctcttgactcaaaaccatttcctcagttataac 38431410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 206 - 543
Target Start/End: Original strand, 3540930 - 3541269
Alignment:
Q  206 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 305  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  3540930 atatttggcaagtgtaccaaaa-ctatcaaagtagtaataaagttcgtatccacgaggaccgttgtgaacttctacttagcaagttcgttaaaataaagg 3541028  T
Q  306 atgtagtaaatttatgggttgctctaggcagctgaatttgg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacaga 403  Q
    ||||| | |||||||||||||| ||| |||| || |||||| ||| |||||| |||||| | |   || |||| |||||||  | ||  | ||||| |||    
T  3541029 atgta-ttaatttatgggttgccctaagcagttggatttggttgcaataaaaagtaaataaca-aaaaataaaatggtttgataattggattaaaataga 3541126  T
Q  404 taatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagt 500  Q
    | ||||||| || ||||||||||||| ||   |||| ||||||||   |||||| ||| || |   || ||||| || || | |  |||||| || | ||    
T  3541127 tgatcaagctttcgaatcctctattgctcattgtgagtaatttgcctctcttctctctcaaagaaattaacctagctttacgacggattaaccaagtggt 3541226  T
Q  501 tttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  3541227 tttgatcaatctcttgactcaaaaccctttcctaagttataac 3541269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 6967389 - 6967274
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||  | |||    
T  6967389 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaa 6967290  T
Q  304 ggatgtagtaaatttat 320  Q
    ||||||| |||||||||    
T  6967289 ggatgta-taaatttat 6967274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 17866357 - 17866472
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||  | |||    
T  17866357 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaa 17866456  T
Q  304 ggatgtagtaaatttat 320  Q
    ||||||| |||||||||    
T  17866457 ggatgta-taaatttat 17866472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 208 - 543
Target Start/End: Complemental strand, 16547359 - 16547020
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 307  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||  ||| | ||||||||||  ||||   ||||||||||||||||    
T  16547359 atttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggattgtt-tcaatttctactcggcaaaagcgttaaaataaaggat 16547261  T
Q  308 gtagtaaatttatgggttgctctaggcagctgaatttgg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagata 405  Q
    ||| |||||||| ||||||| |||||||| || |||||| ||| |||||| |||||| | | |  |  ||| |||||||  | ||  | ||||| | ||     
T  16547260 gtattaaatttaagggttgccctaggcagttggatttggttgcaataaaaagtaaataaca-gagaacaaaatggtttgacaattggactaaaaaaaatg 16547162  T
Q  406 atcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagtt 501  Q
    ||||||||||| ||||||||||||| || | ||||  |||||||   |||||| ||  || |   || ||||| || || | |  ||||||||| |||||    
T  16547161 atcaagcctttcgaatcctctattgctcactgtgaggaatttgcctctcttctctcacaaagaaattaacctagctttacgacggattaactaagtagtt 16547062  T
Q  502 ttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  16547061 ttgatcaatctcttgactcaaaaccctttcctaagttataac 16547020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 208 - 543
Target Start/End: Original strand, 16618303 - 16618642
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 307  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||  ||| | ||||||||||  ||||   ||||||||||||||||    
T  16618303 atttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggattgtt-tcaatttctactcggcaaaagcgttaaaataaaggat 16618401  T
Q  308 gtagtaaatttatgggttgctctaggcagctgaatttgg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagata 405  Q
    ||| |||||||| ||||||| |||||||| || |||||| ||| |||||| |||||| | | |  |  ||| |||||||  | ||  | ||||| | ||     
T  16618402 gtattaaatttaagggttgccctaggcagttggatttggttgcaataaaaagtaaataaca-gagaacaaaatggtttgacaattggactaaaaaaaatg 16618500  T
Q  406 atcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagtt 501  Q
    ||||||||||| ||||||||||||| || | ||||  |||||||   |||||| ||  || |   || ||||| || || | |  ||||||||| |||||    
T  16618501 atcaagcctttcgaatcctctattgctcactgtgaggaatttgcctctcttctctcacaaagaaattaacctagctttacgacggattaactaagtagtt 16618600  T
Q  502 ttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  16618601 ttgatcaatctcttgactcaaaaccctttcctaagttataac 16618642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 17857884 - 17857962
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 282  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17857884 agatatttggcaagtgtaccaaaagctatcgaaatagtaataaagttcgtatccacgaggaccgttgttaatttctact 17857962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 208 - 347
Target Start/End: Complemental strand, 17152310 - 17152173
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 307  Q
    ||||| |||||||||||||| |||||||| ||||||||||||| ||||||||   ||| ||| | ||||||||||  ||||   ||||||||||||||||    
T  17152310 atttgacaagtgtaccaaaa-ctatcgaagtagtaataaagtttgtatccacagagactgtt-tcaatttctactcggcaaaagcgttaaaataaaggat 17152213  T
Q  308 gtagtaaatttatgggttgctctaggcagctgaatttggt 347  Q
    ||| |||||||||||||||| |||||||| || |||||||    
T  17152212 gtattaaatttatgggttgccctaggcagttggatttggt 17152173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 22232672 - 22232728
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22232672 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaagttataac 22232728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 22254067 - 22254011
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22254067 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaagttataac 22254011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 22257331 - 22257275
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22257331 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaagttataac 22257275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 8257961 - 8257905
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  8257961 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataac 8257905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 20100717 - 20100661
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  20100717 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataac 20100661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 23467213 - 23467269
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  23467213 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataac 23467269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 487 - 542
Target Start/End: Original strand, 5826753 - 5826808
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  5826753 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataa 5826808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 487 - 541
Target Start/End: Complemental strand, 42606356 - 42606302
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttata 541  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  42606356 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaaattata 42606302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 406 - 543
Target Start/End: Original strand, 26808694 - 26808831
Alignment:
Q  406 atcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaactaaatagttttga 505  Q
    |||||||||| ||||||||||||| || ||||| ||||||||||  ||||   ||  ||||||||||||||| || | |  ||||||| | |||||||||    
T  26808694 atcaagccttcgaatcctctattgctcaccgtgcataatttgctcctctttgctcccaatgttcacctaactttacgacggattaacttattagttttga 26808793  T
Q  506 tcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||| ||||||||||| |||||  || ||||||||    
T  26808794 tcaatcttttgactcaaaatccttttctaggttataac 26808831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 748086 - 748142
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||    
T  748086 attaactaagtagttttgatcaatctcctgactcaaaaccctttcctaagttataac 748142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 2349532 - 2349476
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||    
T  2349532 attaactaagtagttttgatcaatctctcgactcaaaaccctttcctaagttataac 2349476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 8257632 - 8257688
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||    
T  8257632 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataac 8257688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 11825400 - 11825456
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  11825400 attaactaagtagatttgatcaatctcttgactcaaaaccctttcctaagttataac 11825456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 43549266 - 43549210
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||    
T  43549266 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataac 43549210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 8397918 - 8397862
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| |||| ||||||    
T  8397918 attaactaagtagatttgatcaatctcttgactcaaaaccctttcctaagctataac 8397862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 543
Target Start/End: Complemental strand, 26153342 - 26153168
Alignment:
Q  373 taaattggtttggaatttataataaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---tt 468  Q
    |||| ||||||| || ||| | |||||||||| ||||||||||| |||| |||||||| || |||||| ||||||||   |||||| ||| || |   ||    
T  26153342 taaaatggtttgaaaattagattaaaacagatgatcaagccttttgaattctctattgctcaccgtgagtaatttgcctctcttctctctcaaagaaatt 26153243  T
Q  469 cacctaactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
     ||||| || || | |  ||||||||| | |||||||| |||||||||||||||||||||||| ||||| |||||    
T  26153242 aacctagctttacgacggattaactaagtggttttgattaatctcttgactcaaaaccctttcctaagtcataac 26153168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 26182375 - 26182319
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||| || ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  26182375 attaacaaattagttttgatcaatctcttgagtcaaaaccctttcctaagttataac 26182319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 501 - 543
Target Start/End: Original strand, 22083502 - 22083544
Alignment:
Q  501 tttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  22083502 tttgatcaatctcttgactcaaaaccctttcctaagttataac 22083544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 709787 - 709847
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggac 265  Q
    |||||||||||||||||||||| |||||||||| ||||||||||  |||| |||||||||||    
T  709787 agatatttggcaagtgtaccaataactatcgaagtagtaataaatatcgt-tccacgaggac 709847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 322
Target Start/End: Original strand, 28577687 - 28577798
Alignment:
Q  209 tttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatg 308  Q
    ||||||||||||||||||| ||||||||  | |||| || ||| |||| ||||||||||||||||| ||||||| |  || ||| |||| ||||| ||||    
T  28577687 tttggcaagtgtaccaaaa-ctatcgaagcaataatcaaattcatatctacgaggaccgttgttaacttctactcaataatttcattaacataaa-gatg 28577784  T
Q  309 tagtaaatttatgg 322  Q
    || |||||||||||    
T  28577785 tattaaatttatgg 28577798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 2251932 - 2251888
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  2251932 gttttgatcaatctcttgaatcaaaaccctttcctaagttataac 2251888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 23598820 - 23598864
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  23598820 gttttgatcaatctcttgaatcaaaaccctttcctaagttataac 23598864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 26460526 - 26460482
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  26460526 gttttgatcaatctcttgaatcaaaaccctttcctaagttataac 26460482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 296
Target Start/End: Original strand, 36842945 - 36843032
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgtta 296  Q
    |||||||||||| |||||||  ||||||| || |||  ||| ||| |||||| |||||||||||||||||||||| ||||| |||||||    
T  36842945 atttggcaagtgaaccaaaat-tatcgaagtaataaataagatcgaatccacaaggaccgttgttaatttctactcagcaatttcgtta 36843032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 44017837 - 44017893
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||| |||||||    
T  44017837 attaactaagtggttttgatcaatctcttgacacaaaaccctttcctaaattataac 44017893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 2252220 - 2252177
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  2252220 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 2252177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 23598532 - 23598575
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  23598532 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 23598575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 24783646 - 24783573
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 282  Q
    ||||| |||||| ||||||| |||||||| || |||  || || |||||||||||||||||||||||||||||||    
T  24783646 atttgacaagtgaaccaaaa-ctatcgaagtaataaataaatttgtatccacgaggaccgttgttaatttctact 24783573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 17601950 - 17601877
Alignment:
Q  249 ttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatttatgg 322  Q
    ||||||||||| |||||  ||||||||||||| | | ||| || |||||| ||||||||||| |||||||||||    
T  17601950 ttcgtatccacaaggactattgttaatttctaatcatcaattttgttaaactaaaggatgtattaaatttatgg 17601877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 710074 - 710118
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| |||||||| |||| |||||||||||    
T  710074 gttttgatcaatctcttgaatcaaaaccttttcctaagttataac 710118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 438 - 542
Target Start/End: Original strand, 28577913 - 28578017
Alignment:
Q  438 gaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagt 537  Q
    |||||||||||   |||||| ||| || ||| ||||| || |||| |  ||||||  ||||||||||||||||||||||| ||||||| ||||| || ||    
T  28577913 gaataatttgcccctcttctctctcaaagttaacctagctttatgacggattaacctaatagttttgatcaatctcttgagtcaaaactctttcctaggt 28578012  T
Q  538 tataa 542  Q
    |||||    
T  28578013 tataa 28578017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 320
Target Start/End: Complemental strand, 295101 - 294987
Alignment:
Q  205 gatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaag 304  Q
    ||||||||||||||| ||||||  | |||||| || ||| ||| || || ||||||||||| ||  |||| ||||||||||||| ||| |||  | ||||    
T  295101 gatatttggcaagtgaaccaaattcaatcgaagtaataaaaaattt-gtgtccacgaggactgtatttaacttctacttagcaatttcattattaaaaag 295003  T
Q  305 gatgtagtaaatttat 320  Q
    |||||| |||||||||    
T  295002 gatgtaataaatttat 294987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 247
Target Start/End: Complemental strand, 20100989 - 20100950
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  20100989 atttggcaagtgtaccaataactatcgaagtagtaataaa 20100950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 542
Target Start/End: Complemental strand, 42859054 - 42859008
Alignment:
Q  495 aatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||||||    
T  42859054 aatagttttgatcaatctcttgagtcaaaa-cctttcctaagttataa 42859008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 487 - 525
Target Start/End: Original strand, 30058196 - 30058234
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaac 525  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  30058196 attaacaaaatagttttgatcaatcccttgactcaaaac 30058234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 247
Target Start/End: Complemental strand, 26460808 - 26460771
Alignment:
Q  210 ttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  26460808 ttggcaagtgtaccaataactatcgaagtagtaataaa 26460771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 6214420 - 6214476
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||| | ||| |||||||||||||||||||||||  |||||| || ||||||||    
T  6214420 attaacttattagctttgatcaatctcttgactcaaagtcctttcctaggttataac 6214476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 336
Target Start/End: Complemental strand, 9766042 - 9765912
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||  ||||||| |||||||| || |||  ||| ||| |||||  ||| |||||||||||||||||| ||||  ||| |||    |||    
T  9766042 agatatttggcaagttaaccaaaa-ctatcgaagtaataaataagatcgaatccataagggccgttgttaatttctactcagcattttctttatcgaaaa 9765944  T
Q  304 ggatgtagtaaatttatgggttgctctaggcag 336  Q
    ||||||| ||||||| | |||||| ||||||||    
T  9765943 ggatgtattaaatttct-ggttgccctaggcag 9765912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 23759613 - 23759696
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 288  Q
    |||||||||||||||| ||||||  | |||||| || ||| ||||||||| || |||||||| ||  |||| |||||||||||||    
T  23759613 agatatttggcaagtgaaccaaattcaatcgaagtaataa-aaagttcgtttctacgaggactgtatttaacttctacttagcaa 23759696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 6e-60; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 204 - 543
Target Start/End: Original strand, 34552442 - 34552785
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34552442 agatatttgacaagtgtaccaaaa-ctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagtttgttaaaataaa 34552540  T
Q  304 ggatgtagtaaa-tttat-gggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaac 400  Q
    |||||||||||| ||||| ||||||| |||||||| || |||||| |  |||||| |||||    | | || |||| |||||||  | ||  | |||| |    
T  34552541 ggatgtagtaaattttatggggttgccctaggcagttggatttggttttataaaacgtaaa--caaagtaaataaaatggtttgataattggattaaagc 34552638  T
Q  401 agataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaa 496  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||   |||||| |||||| |   || ||||| || || | || |||||||||     
T  34552639 agatgatcaagcctttcgaatcctctattgctcaccgtgagtaatttgcctctcttctctcttaaagaaattaacctagctttacgacaaattaactaag 34552738  T
Q  497 tagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    | |||||||||||||||||||||||||||||||||  ||||||||||    
T  34552739 tggttttgatcaatctcttgactcaaaaccctttccaaagttataac 34552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 210 - 543
Target Start/End: Complemental strand, 18392747 - 18392409
Alignment:
Q  210 ttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgt 309  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  18392747 ttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagtttgttaaaataaaggatct 18392648  T
Q  310 agtaaa-tttat-gggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagataa 406  Q
    |||||| ||||| ||||||| |||| ||| || |||||| |  |||||| |||||    | | || |||| |||||||  | ||  | |||||||||| |    
T  18392647 agtaaattttatggggttgccctagccagttggatttggttttataaaacgtaaa--caaagtaaataaaatggtttgataattggattaaaacagatga 18392550  T
Q  407 tcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagttt 502  Q
    |||||||||| ||||||||||||| || || ||| ||||||||   |||||| ||| || |   || ||||| || || | || ||||||||| | ||||    
T  18392549 tcaagcctttcgaatcctctattgctcaccatgagtaatttgcctatcttctctctcaaagaaattaacctagctttacgacaaattaactaagtggttt 18392450  T
Q  503 tgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  18392449 tgatcaatctcttgactcaaaaccctttcctaagttataac 18392409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 204 - 345
Target Start/End: Complemental strand, 49716731 - 49716589
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||| ||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49716731 agataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 49716632  T
Q  304 ggatgtagtaaa-tttatgggttgctctaggcagctgaatttg 345  Q
    |||||||||||| |||||||||||| |||||||| || |||||    
T  49716631 ggatgtagtaaattttatgggttgccctaggcagttggatttg 49716589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 204 - 333
Target Start/End: Complemental strand, 49720213 - 49720083
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||| ||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49720213 agataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 49720114  T
Q  304 ggatgtagtaaa-tttatgggttgctctagg 333  Q
    || ||||||||| |||||||||||| |||||    
T  49720113 gggtgtagtaaattttatgggttgccctagg 49720083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 206 - 543
Target Start/End: Complemental strand, 6206239 - 6205897
Alignment:
Q  206 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 305  Q
    |||||| |||||||||| ||||  ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  6206239 atatttagcaagtgtactaaaat-tatcgaagtagtaataaagttcgtatccacgagaaccgttgttaatttctacttaacaagttcgttaaaataaagg 6206141  T
Q  306 atgtagtaaattt--atgggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacag 402  Q
    |||||||||||||    ||||||| ||||| || |  |||||| |  |||||| |||||    | | || |||| |||||||  | ||  | ||||||||    
T  6206140 atgtagtaaatttgacagggttgccctaggtagttcgatttggttttataaaacgtaaa--caaagtaaataaaatggtttgataattggattaaaacag 6206043  T
Q  403 ataatcaagcc-tttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaata 498  Q
    || |||||||| |||||||||||||||| || |||||| |||||||    |||||| ||| || |   || ||||| || || | || ||||||||| |     
T  6206042 atgatcaagccttttgaatcctctattgctcaccgtgagtaatttggctctcttctctctcaaagaaattaacctagctttacgacaaattaactaagtg 6205943  T
Q  499 gttttgatcaatctcttgactc-aaaaccctttcttaagttataac 543  Q
     ||||||||||||||||||||| ||||||||||| |||||||||||    
T  6205942 attttgatcaatctcttgactcaaaaaccctttcctaagttataac 6205897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 10765161 - 10765046
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||  | |||    
T  10765161 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaa 10765062  T
Q  304 ggatgtagtaaatttat 320  Q
    ||||||| |||||||||    
T  10765061 ggatgta-taaatttat 10765046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 13493504 - 13493389
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||  | |||    
T  13493504 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaa 13493405  T
Q  304 ggatgtagtaaatttat 320  Q
    ||||||| |||||||||    
T  13493404 ggatgta-taaatttat 13493389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 50196721 - 50196803
Alignment:
Q  206 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 288  Q
    ||||||||||||||||||||||||||| ||| || ||||||| || |||||||||||||||||||||||| || |||||||||    
T  50196721 atatttggcaagtgtaccaaaaactattgaagtaataataaaatttgtatccacgaggaccgttgttaatctcaacttagcaa 50196803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 17902833 - 17902889
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  17902833 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataac 17902889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 50197004 - 50197060
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  50197004 attaactaaatggttttgatcaatctcttgactcaaaaccctttcctaagttataac 50197060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 28918448 - 28918393
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  28918448 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataa 28918393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 49716446 - 49716391
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  49716446 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataa 49716391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 49719928 - 49719873
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  49719928 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataa 49719873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 33898399 - 33898343
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||    
T  33898399 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataac 33898343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 208 - 320
Target Start/End: Complemental strand, 13496224 - 13496114
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 307  Q
    ||||| |||||| ||||||| |||||||| || |||  || ||||||||||||||||||||||||||||||||||  |||| ||| |||  | |||||||    
T  13496224 atttgacaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaaggat 13496126  T
Q  308 gtagtaaatttat 320  Q
    ||| |||||||||    
T  13496125 gta-taaatttat 13496114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 20981433 - 20981377
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||| |||||| |||||| |||||||||||    
T  20981433 attaactaagtagttttgatcaatctcttgaatcaaaatcctttcctaagttataac 20981377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 23441329 - 23441385
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| |||||||||||    
T  23441329 attaactaagtggttttgatcaatctcttgacacaaaaccctttcctaagttataac 23441385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 37641941 - 37641885
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| || ||||||||    
T  37641941 attaactaagtagatttgatcaatctcttgactcaaaaccctttcctaggttataac 37641885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 543
Target Start/End: Complemental strand, 20964540 - 20964474
Alignment:
Q  476 ctctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||| || ||||||||| ||||||||||||||||||||| || |||||||||| |||||||||||    
T  20964540 ctctatgacaaattaactaagtagttttgatcaatctcttgaatc-aaaccctttcctaagttataac 20964474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 16838991 - 16839035
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  16838991 gttttgatcaatctcttgaatcaaaaccctttcctaagttataac 16839035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 16848921 - 16848965
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  16848921 gttttgatcaatctcttgaatcaaaaccctttcctaagttataac 16848965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 17902557 - 17902600
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  17902557 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 17902600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 20981708 - 20981665
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  20981708 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 20981665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 499 - 542
Target Start/End: Original strand, 24200301 - 24200344
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||    
T  24200301 gttttgatcaatctcttgaatcaaaaccctttcctaagttataa 24200344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 3087770 - 3087826
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | |||||||||||||||| |||||||||| ||||  |||||||||||    
T  3087770 attaactaagtggttttgatcaatctctcgactcaaaactctttactaagttataac 3087826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 317
Target Start/End: Original strand, 16190203 - 16190295
Alignment:
Q  225 aaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatt 317  Q
    |||||||||||| || |||  || ||||||||||||||||| ||||||||||| || |   |||   ||||||||||||||||||| ||||||    
T  16190203 aaaactatcgaagtaataaataaattcgtatccacgaggactgttgttaatttttattcgacaaaaacgttaaaataaaggatgtattaaatt 16190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 247
Target Start/End: Original strand, 24200017 - 24200056
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  24200017 atttggcaagtgtaccaataactatcgaagtagtaataaa 24200056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 37642210 - 37642167
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||    
T  37642210 agatatttgacaagtgtaccaataactatcgaagtagtaataaa 37642167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 487 - 525
Target Start/End: Original strand, 5317893 - 5317931
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaac 525  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  5317893 attaacaaaatagttttgatcaatctcttgaatcaaaac 5317931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 32505861 - 32505922
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggacc 266  Q
    |||||||||||||||| ||||||| |||||||| || |||  ||| |||||||||||||||||    
T  32505861 agatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtatccacgaggacc 32505922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 247
Target Start/End: Original strand, 16838709 - 16838746
Alignment:
Q  210 ttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  16838709 ttggcaagtgtaccaataactatcgaagtagtaataaa 16838746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 247
Target Start/End: Original strand, 16848639 - 16848676
Alignment:
Q  210 ttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  16848639 ttggcaagtgtaccaataactatcgaagtagtaataaa 16848676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 246
Target Start/End: Original strand, 14546487 - 14546527
Alignment:
Q  206 atatttggcaagtgtaccaaaaactatcgaattagtaataa 246  Q
    |||||||||||||||| ||||||||||||||  ||||||||    
T  14546487 atatttggcaagtgtatcaaaaactatcgaagaagtaataa 14546527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 15297559 - 15297492
Alignment:
Q  213 gcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctac 281  Q
    ||||||||||||||| |||||||| ||||||   | ||| |||||||| ||||||||||||| ||||||    
T  15297559 gcaagtgtaccaaaa-ctatcgaagtagtaaatgaattcatatccacggggaccgttgttaacttctac 15297492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 204 - 336
Target Start/End: Original strand, 33734 - 33865
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33734 agatatttggcaagtgtaccaaaa-ctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 33832  T
Q  304 ggatgtagtaaatttatgggttgctctaggcag 336  Q
    ||||||| |||||||||||||||| ||||||||    
T  33833 ggatgtactaaatttatgggttgccctaggcag 33865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 2e-53; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 204 - 346
Target Start/End: Complemental strand, 9467425 - 9467283
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9467425 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttcttcttagcaagttcgttaaaataaa 9467326  T
Q  304 ggatgtagtaaatttatgggttgctctaggcagctgaatttgg 346  Q
    |||||||||||||||||   |||| |||||||| || ||||||    
T  9467325 ggatgtagtaaatttatcaattgccctaggcagttggatttgg 9467283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 204 - 543
Target Start/End: Original strand, 39659716 - 39660058
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39659716 agatatttggcaagtgtaccgaaa-ctatcgaagtagtaataaagttcgtatccacgaggaccattgttaatttctacttagcaagttcgttaaaataaa 39659814  T
Q  304 ggatgtagtaaa-tttat-gggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaac 400  Q
    |||||||||||| ||||| ||||||| |||||||| || |||||| |  |||||| |||||    | | || |||| |||||||  | ||  | ||||||    
T  39659815 ggatgtagtaaattttatggggttgccctaggcagttggatttggttttataaaacgtaaa--caaagtaaataaaatggtttgataattggattaaaac 39659912  T
Q  401 agataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaa 496  Q
    |||| ||| ||||||| ||||||||||||| || |||||| |||||||    |||||| ||| || |   || ||||| || || | || ||| ||| |     
T  39659913 agatgatctagcctttcgaatcctctattgctcaccgtgagtaatttggctctcttctctctcaaagaaattaacctagctttacgacaaatt-acttag 39660011  T
Q  497 tagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    | ||||||||||||||||||||||||||||||||| |||||||||||    
T  39660012 tggttttgatcaatctcttgactcaaaaccctttcctaagttataac 39660058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 204 - 347
Target Start/End: Complemental strand, 453947 - 453803
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||||||| ||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  453947 agatatttgacaagtgtaccaaaaactatggaagtactaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 453848  T
Q  304 ggatgtagtaaa-tttatgggttgctctaggcagctgaatttggt 347  Q
    |||| ||||||| |||||||||||| | |||||| || |||||||    
T  453847 ggatttagtaaattttatgggttgccccaggcagttggatttggt 453803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 225 - 543
Target Start/End: Complemental strand, 13332428 - 13332106
Alignment:
Q  225 aaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaa-tttat-gg 322  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||    
T  13332428 aaaactatcgaagtagtaataaagtttgtatccatgaggaccgttgttaatttatacttagcaagttcgttaaaataaaggatgtagtaaattttatggg 13332329  T
Q  323 gttgctctaggcagctgaatttg-gtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagataatcaagccttt-gaat 420  Q
    ||||| |||||||| || |||||  |  |||||| |||||    | | || |||| |||||||  | ||  | ||||||| || ||||||||||| ||||    
T  13332328 gttgccctaggcagttggatttgattttataaaacgtaaa--caaagtaaataaaatggtttgataattgaattaaaacatatgatcaagcctttcgaat 13332231  T
Q  421 cctctattgttcgccgtgaataatttgctagtcttctatct--taatgttcacctaactctatggcatattaactaaatagttttgatcaatctcttgac 518  Q
    ||||||||| || |||||| ||||||  |  |||||| |||   ||  || ||||| || || | || ||||||||| | ||||||||||||||||||||    
T  13332230 cctctattgctcaccgtgagtaattttgttctcttctctctcaaaaaattaacctagctttacgacaaattaactaagtggttttgatcaatctcttgac 13332131  T
Q  519 tcaaaaccctttcttaagttataac 543  Q
    ||||||||||||| |||||||||||    
T  13332130 tcaaaaccctttcctaagttataac 13332106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 204 - 543
Target Start/End: Complemental strand, 5828387 - 5828044
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||  |||| ||| | ||||||||||   |||   ||||||||||||    
T  5828387 agatatttggcaagtgtaccaaaagctatcgaagtagtagtaaagttcgtatccacatggactgtt-tcaatttctactcgtcaaaagcgttaaaataaa 5828289  T
Q  304 ggatgtagtaaatttatgggttgctctaggcagctgaatttggt-gca-taaaatgtaaatgagatgcaattaaattggtttggaatttataataaaaca 401  Q
    ||||| | |||||||||||||||| |||||||| || ||||||| ||| ||||| |||||| | | | || |||| |||||||  | ||  | |||||||    
T  5828288 ggatgcattaaatttatgggttgccctaggcagttggatttggttgcaataaaaagtaaataaca-gaaaataaaatggtttgataattggattaaaaca 5828190  T
Q  402 gataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaat 497  Q
     || ||||||||||| ||||||||||||| ||   |||| ||||||||   |||||| ||| || |   || ||||| || ||      ||||||||| |    
T  5828189 tatcatcaagcctttcgaatcctctattgctcagtgtgagtaatttgcctctcttctctctcaaagaaattaacctagctttacaaaggattaactaagt 5828090  T
Q  498 agttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
     ||||||||||||||||||||||||||||||||| |||||||||||    
T  5828089 ggttttgatcaatctcttgactcaaaaccctttcctaagttataac 5828044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 20262629 - 20262573
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20262629 attaactaattagttttgatcaatctcttgactcaaaaccctttcttaagttataac 20262573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 21049259 - 21049203
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21049259 attaactaattagttttgatcaatctcttgactcaaaaccctttcttaagttataac 21049203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 27863599 - 27863655
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27863599 attaactaaatagttttgatcaatctcttgactcaaaaccctttcctaagttataac 27863655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 14188075 - 14188019
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  14188075 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataac 14188019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 18696020 - 18696076
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  18696020 attaactaagtagttttgatcaatctcttgactcgaaaccctttcctaagttataac 18696076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 22654336 - 22654280
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  22654336 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaaattataac 22654280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 30645547 - 30645491
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  30645547 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttctaac 30645491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 31986349 - 31986294
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  31986349 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagtaataa 31986294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 5964330 - 5964274
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||| |||||||||||    
T  5964330 attaactaagtagatttgatcaatctcttgactcaaaaccatttcctaagttataac 5964274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 12575306 - 12575416
Alignment:
Q  206 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 305  Q
    |||||||||||||||||||||  | |||||| || |||  || ||||||||||||||||| |||||||| ||||||| | ||||||| |||  | |||||    
T  12575306 atatttggcaagtgtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggactgttgttaacttctactcaacaagttcattattaaaaagg 12575404  T
Q  306 atgtagtaaatt 317  Q
    ||||| ||||||    
T  12575405 atgtattaaatt 12575416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 487 - 537
Target Start/End: Complemental strand, 31981422 - 31981372
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagt 537  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  31981422 attaactaattagttttgatcaatctcttgattcaaaaccctttcataagt 31981372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 17013089 - 17013133
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  17013089 gttttgatcaatctcttgaatcaaaaccctttcctaagttataac 17013133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 24903541 - 24903585
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  24903541 gttttgatcaatctcttgaatcaaaaccctttcctaagttataac 24903585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 24903254 - 24903297
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  24903254 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 24903297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 525
Target Start/End: Complemental strand, 453662 - 453624
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaac 525  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  453662 attaactaagtagttttgatcaatctcttgactcaaaac 453624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 5980067 - 5980124
Alignment:
Q  209 tttggcaagtgtaccaaaaactatcgaattagtaata-aagttcgtatccacgaggac 265  Q
    |||| ||||||||||||||||||||||| || ||| | ||||||||||||||||||||    
T  5980067 tttgacaagtgtaccaaaaactatcgaagtaataacataagttcgtatccacgaggac 5980124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 587387 - 587331
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||||| || ||||||||    
T  587387 attaacttattagctttgatcaatctcttgactcaaagccctttcctaggttataac 587331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 626535 - 626591
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||||| || ||||||||    
T  626535 attaacttattagctttgatcaatctcttgactcaaagccctttcctaggttataac 626591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 17544112 - 17544068
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||    
T  17544112 gttttgatcaatatcttgaatcaaaaccctttcctaagttataac 17544068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 17012801 - 17012840
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaa 243  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  17012801 agatatttggcaagtgtaccaataactatcgaagtagtaa 17012840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 17544400 - 17544361
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaa 243  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  17544400 agatatttggcaagtgtaccaataactatcgaagtagtaa 17544361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 22654612 - 22654570
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataa 246  Q
    |||||||||||||||||| ||| |||||||||| |||||||||    
T  22654612 agatatttggcaagtgtatcaataactatcgaagtagtaataa 22654570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 336
Target Start/End: Original strand, 12820690 - 12820782
Alignment:
Q  243 ataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatttatgggttgctctaggcag 336  Q
    |||||||||||||||||  |||| ||| | ||||||||||  ||||    |||||||||||||||||  ||| |||||||||||| ||||||||    
T  12820690 ataaagttcgtatccacatggactgtt-tcaatttctactcggcaaagatgttaaaataaaggatgtgttaagtttatgggttgccctaggcag 12820782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 17931329 - 17931296
Alignment:
Q  210 ttggcaagtgtaccaaaaactatcgaattagtaa 243  Q
    ||||||||||||||||||||||||||| ||||||    
T  17931329 ttggcaagtgtaccaaaaactatcgaagtagtaa 17931296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 531
Target Start/End: Original strand, 31468169 - 31468213
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttc 531  Q
    ||||||| ||||||||| ||||||||||||| ||||||| |||||    
T  31468169 attaactcaatagttttcatcaatctcttgagtcaaaacactttc 31468213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 3e-52; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 204 - 347
Target Start/End: Complemental strand, 29436109 - 29435965
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||| ||| |||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29436109 agataattgacaagtgtatcaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 29436010  T
Q  304 ggatgtagtaaa-tttatgggttgctctaggcagctgaatttggt 347  Q
    |||||||||||| |||||||||||| |||||||| || |||||||    
T  29436009 ggatgtagtaaattttatgggttgcactaggcagttggatttggt 29435965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 206 - 543
Target Start/End: Original strand, 38315807 - 38316148
Alignment:
Q  206 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 305  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  38315807 atatttggtaagtgtatcaaaa-ctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaa-ttctacttagcaagttcgttaaaattaagg 38315904  T
Q  306 atgtagtaaattt--atgggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacag 402  Q
    |||||||||||||    ||||||  |||||||| || |||||| |||||||||  | |||   | | || |||| |||||||  | ||  | ||||||||    
T  38315905 atgtagtaaattttacggggttgtcctaggcagttggatttggttgcataaaa-cttaatacaaagtaaataaaatggtttgataattggattaaaacag 38316003  T
Q  403 ataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaata 498  Q
    || ||||||||||| ||||||||||||| || | |||| ||||||||   |||||| ||| || |   || || || || || | || ||||||||| |     
T  38316004 atgatcaagcctttcgaatcctctattgctcacagtgagtaatttgcctctcttctctctcaaagaaattaacttagctttacgacaaattaactaagtg 38316103  T
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    || |||||||||||||| ||||||||||||||| |||||||||||    
T  38316104 gtattgatcaatctcttcactcaaaaccctttcctaagttataac 38316148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 218 - 349
Target Start/End: Original strand, 13572059 - 13572192
Alignment:
Q  218 tgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaattt--ctacttagcaagttcgttaaaataaaggatgtagtaaa 315  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||| ||    
T  13572059 tgtaccaaaagctatcgaagtagtaataaagttcgtatctacgaggaccgttgttaatttttctacttagcaaattcgttaaaataaaggatgtagtgaa 13572158  T
Q  316 tttatgggttgctctaggcagctgaatttggtgc 349  Q
    |||||||||||| |||||||| || ||| |||||    
T  13572159 tttatgggttgcactaggcagttggattaggtgc 13572192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 368 - 542
Target Start/End: Complemental strand, 40139314 - 40139140
Alignment:
Q  368 gcaattaaattggtttggaatttataataaaacagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgt 467  Q
    |||||||| |||||||| || ||||| ||||||| || |||||||||| ||||||||||||| || | |||||||||||| |  ||||||  || |||||    
T  40139314 gcaattaagttggtttgaaaattatattaaaacaaatgatcaagccttcgaatcctctattgctcactgtgaataatttgttcctcttcttgctcaatgt 40139215  T
Q  468 tcacctaactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||| |||  | || | || ||||||  ||||||||||||||||||||||| ||||||| ||||  ||||||||||    
T  40139214 tcatctagttttacgacagattaacacaatagttttgatcaatctcttgagtcaaaactcttttctaagttataa 40139140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 4577898 - 4577842
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  4577898 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataac 4577842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 11056415 - 11056359
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  11056415 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataac 11056359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 29435824 - 29435768
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  29435824 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataac 29435768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 23673353 - 23673461
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 307  Q
    |||||||||||| ||||||| |||||||| || |||  || |||||||||||||||||||||||||||||||||| | ||| ||| |||  | |||||||    
T  23673353 atttggcaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcaacaatttctttatcaaaaaggat 23673451  T
Q  308 gtagtaaatt 317  Q
    ||| ||||||    
T  23673452 gtattaaatt 23673461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 539
Target Start/End: Original strand, 1503478 - 1503530
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagtta 539  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  1503478 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagtta 1503530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 539
Target Start/End: Original strand, 1506682 - 1506734
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagtta 539  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  1506682 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagtta 1506734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 11059873 - 11059817
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  11059873 attaactaagtagatttgatcaatctcttgactcaaaaccctttcctaagttataac 11059817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 15704015 - 15704071
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  15704015 attaactaagtagttttgatcaatctcttgactcgaaaccctttcctaagttataac 15704071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 15719319 - 15719375
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  15719319 attaactaagtagttttgatcaatctcttgactcgaaaccctttcctaagttataac 15719375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 36327167 - 36327090
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 282  Q
    |||||||||||||||| ||||||| |||||||| || |||  || |||||||||||||||||||||||||| |||||||    
T  36327167 agatatttggcaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctact 36327090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 486 - 543
Target Start/End: Complemental strand, 30719849 - 30719792
Alignment:
Q  486 tattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  30719849 tattaacttattagctttgatcaatctcttgactcaaaaccctttcctaagttataac 30719792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 32575689 - 32575801
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||| ||||| | |||| ||| || |||  || |||||||||||||||||||||||||| ||||||| | | | ||||||| ||||||    
T  32575689 agatatttggcaagtgaaccaaca-ctattgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactcaacgatttcgttataataaa 32575787  T
Q  304 ggatgtagtaaatt 317  Q
     |||||| ||||||    
T  32575788 tgatgtattaaatt 32575801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 13518377 - 13518321
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||    
T  13518377 attaactaagtagatttgatcaatctcttgactcaaacccctttcctaagttataac 13518321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 16295135 - 16295048
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgtta 296  Q
    |||||||||||| ||||||| |||||||| || |||  ||| ||  ||||||||||||||||||||||||||||| ||||| |||||||    
T  16295135 atttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcaaatccacgaggaccgttgttaatttctactcagcaatttcgtta 16295048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 18012016 - 18011961
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  18012016 attaactaagtagttttgatcaatctcttgactc-aaaccctttcctaagttataac 18011961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 40677817 - 40677873
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| |||||||||||    
T  40677817 attaactaagtggttttgatcaatctcttgacacaaaaccctttcctaagttataac 40677873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 496 - 543
Target Start/End: Original strand, 38326319 - 38326366
Alignment:
Q  496 atagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  38326319 atagttttgatcaatctcttgactcaaaactctttcctaagttataac 38326366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 18938955 - 18938911
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  18938955 gttttgatcaatctcttgaatcaaaaccctttcctaagttataac 18938911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 24384929 - 24385023
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaata--aagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaa 297  Q
    |||||||||||||||||||||||| |||||||| || ||| |  || ||||||| ||||| ||| ||| |||||||||||||||||| ||| ||||    
T  24384929 agatatttggcaagtgtaccaaaa-ctatcgaagtaataaaattaaattcgtattcacgatgactgttattaatttctacttagcaatttctttaa 24385023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 336
Target Start/End: Original strand, 32074160 - 32074293
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataa--agttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaata 301  Q
    ||||||||| ||||| ||||||||  ||||||| || ||||||  | || |||||||||| |   ||||||||||||||||||| || ||| ||||  ||    
T  32074160 agatatttgacaagtataccaaaat-tatcgaagtaataataataaatttgtatccacgatggttgttgttaatttctacttagaaatttcattaatgta 32074258  T
Q  302 aaggatgtagtaaatttatgggttgctctaggcag 336  Q
    ||||||||| |||| || |||||||| ||||||||    
T  32074259 aaggatgtattaaaattgtgggttgccctaggcag 32074293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 22592575 - 22592531
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| ||||| |||||    
T  22592575 gttttgatcaatctcttgagtcaaaaccctttcctaagtcataac 22592531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 18939243 - 18939200
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||    
T  18939243 agataattggcaagtgtaccaataactatcgaagtagtaataaa 18939200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 22592862 - 22592819
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||    
T  22592862 agatatttggtaagtgtaccaataactatcgaagtagtaataaa 22592819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 487 - 521
Target Start/End: Original strand, 25925175 - 25925209
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactca 521  Q
    |||||| ||||||||||||||||||||||||||||    
T  25925175 attaacaaaatagttttgatcaatctcttgactca 25925209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 528
Target Start/End: Original strand, 40778988 - 40779029
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccct 528  Q
    |||||| |||||| | ||||||||||||||||||||||||||    
T  40778988 attaacaaaatagatctgatcaatctcttgactcaaaaccct 40779029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 31528631 - 31528517
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||| ||||||  | |||||| || ||| ||| || || ||||||||||| ||  |||| ||||||||||||| ||| |||  | |||    
T  31528631 agatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattt-gtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaa 31528533  T
Q  304 ggatgtagtaaatttat 320  Q
    ||||||| |||||||||    
T  31528532 ggatgta-taaatttat 31528517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 40677532 - 40677614
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 288  Q
    ||||| |||||||||||||||| |||||||||| |||||| |||  ||||  |||||||||| | |||||||||| | |||||||    
T  40677532 agataattggcaagtgtaccaataactatcgaagtagtaa-aaatatcgttcccacgaggactg-tgttaatttcaatttagcaa 40677614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 2e-50; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 204 - 543
Target Start/End: Complemental strand, 13979493 - 13979151
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||||||||||||||||| || ||||| |||| ||||||||||  | || ||||| |||||||||||||||| |||||||||||||||||| | |||||    
T  13979493 agatatttggcaagtgtactaataactaacgaagtagtaataaatattgt-tccacaaggaccgttgttaattcctacttagcaagttcgttgacataaa 13979395  T
Q  304 ggatgtagtaaatttatgggttgctctaggcagctgaatttgg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaaca 401  Q
    |||||||||||||||||||||| | |||||||| || |||||| ||| |||||| |||||| | | | || |||| |||||||  | ||  | |||||||    
T  13979394 ggatgtagtaaatttatgggttaccctaggcagttggatttggttgcaataaaaagtaaataaca-gaaaataaaatggtttgataattggattaaaaca 13979296  T
Q  402 gataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatctta--atgttcacctaactctatggcatattaactaaata 498  Q
    ||| ||||||||||| |||||||||||||||| | |||| ||||||||   |||||| ||| |  |  || ||||| || || | |  ||||||||| |     
T  13979295 gatgatcaagcctttcgaatcctctattgttcactgtgagtaatttgcctctcttctctctcaagaaattaacctagctttacgacggattaactaagtg 13979196  T
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  13979195 gttttgatcaatctcttgactcaaaaccctttcctaagttataac 13979151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 208 - 543
Target Start/End: Complemental strand, 15851529 - 15851190
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 307  Q
    |||||||||||||||||||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15851529 atttggcaagtgtaccaaaa-ctatcgaagtaatagtaaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 15851431  T
Q  308 gtagtaaa-tttat-gggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagat 404  Q
    |||||||| ||||| ||||||| |||||| | || |||||| |  |||||| |||||    | | || |||| |||||||  | ||    ||||||||||    
T  15851430 gtagtaaattttatggggttgccctaggctgttggatttggttttataaaacgtaaa--caaagtaaataaaatggtttgataattgggttaaaacagat 15851333  T
Q  405 aatcaagcc-tttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagt 500  Q
     |||||||| |||||||||||||||| || |||||| |||||||    |||||| ||| || |   || ||||| || || | || ||||||||| | ||    
T  15851332 gatcaagccttttgaatcctctattgctctccgtgagtaatttggctctcttctctctcaaagaaattaacctagctttacgacaaattaactaagtggt 15851233  T
Q  501 tttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||||||||| |||||||||||||||||| |||||||||||    
T  15851232 tttgatcaatcttttgactcaaaaccctttcctaagttataac 15851190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 33400079 - 33400207
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  33400079 agatatttggcaagtgtaccaaaagctatcgaggtagtaataaagttcgtatccacgagaaccgttgttaatttctgcttagcaagttcgttaaaataaa 33400178  T
Q  304 ggatgtagtaaatttatgggttgctctag 332  Q
    ||||||| |||||||||||||||| ||||    
T  33400179 ggatgtaataaatttatgggttgccctag 33400207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 204 - 543
Target Start/End: Complemental strand, 19929238 - 19928897
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||||||||| |||||||||| ||||||||||  |||| |||||||||||||||||||||||||||||||||||||| || | |||||    
T  19929238 agatatttggcaagtgtaccaataactatcgaagtagtaataaatatcgt-tccacgaggaccgttgttaatttctacttagcaagttctttgacataaa 19929140  T
Q  304 ggatgtagtaaa-tttatgggttgctctaggcagctgaatttggtgcataaaatgtaaatgagatgcaattaaattggtttg-gaatttataataaaaca 401  Q
    |||||| ||||| |||||  | |||   ||||||  |  ||  ||||||||||  ||||| | | | || |||| |||||||  ||||     |||||||    
T  19929139 ggatgt-gtaaattttataag-tgcctgaggcagtaggtttgtgtgcataaaaattaaataaca-gaaaataaaatggtttgataattggatttaaaaca 19929043  T
Q  402 gataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaat 497  Q
    ||| ||||||||||| ||||||||||||| || | |||| ||||||||   |||||| ||| || |   || |||||||| || | |  ||||||||| |    
T  19929042 gatgatcaagcctttcgaatcctctattgctcactgtgagtaatttgcctctcttctctctcaaagaaattaacctaactttacgacggattaactaagt 19928943  T
Q  498 agttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
     ||||||||||||||||||||||||||||||||| |||||||||||    
T  19928942 ggttttgatcaatctcttgactcaaaaccctttcctaagttataac 19928897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 206 - 320
Target Start/End: Original strand, 647209 - 647322
Alignment:
Q  206 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 305  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||  |||| ||| |||  | |||||    
T  647209 atatttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaagg 647308  T
Q  306 atgtagtaaatttat 320  Q
    ||||| |||||||||    
T  647309 atgta-taaatttat 647322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 206 - 282
Target Start/End: Original strand, 650481 - 650557
Alignment:
Q  206 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 282  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  650481 atatttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctact 650557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 206 - 347
Target Start/End: Complemental strand, 37176993 - 37176855
Alignment:
Q  206 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 305  Q
    |||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||||| ||| | ||||||||||  ||||   | ||||||||||||    
T  37176993 atatttggcaagtgtaccaaaagctatcga--tagtaataaagttcgtatccacaaggactgtt-tcaatttctactcggcaaaagctttaaaataaagg 37176897  T
Q  306 atgtagtaaatttatgggttgctctaggcagctgaatttggt 347  Q
    ||||| |||||||||||||||| |||| ||| || |||||||    
T  37176896 atgtattaaatttatgggttgccctagacagttggatttggt 37176855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 18859852 - 18859796
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  18859852 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataac 18859796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 10247889 - 10247833
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||    
T  10247889 attaactaattagttttgatcaatctcttgactcaaaaccatttcctaagttataac 10247833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 539
Target Start/End: Original strand, 11702632 - 11702684
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagtta 539  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  11702632 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagtta 11702684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 476 - 531
Target Start/End: Complemental strand, 10386018 - 10385963
Alignment:
Q  476 ctctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttc 531  Q
    ||||||| || ||||||||| |||||||||||||||||||||||||||||||||||    
T  10386018 ctctatgacaaattaactaattagttttgatcaatctcttgactcaaaaccctttc 10385963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 17670386 - 17670331
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  17670386 attaattaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataa 17670331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 23653348 - 23653292
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||| | |||||||||||||||||| |||||||||||    
T  23653348 attaactaattagttttgatcaattttttgactcaaaaccctttcctaagttataac 23653292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 26703536 - 26703592
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||| |||||||||||    
T  26703536 attaactaagtggttttgatcaatctcttgactcaaaactctttcctaagttataac 26703592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 3734374 - 3734330
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  3734374 gttttgatcaatctcttgaatcaaaaccctttcctaagttataac 3734330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 12172214 - 12172099
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||| ||||||  | |||||| || ||| |||| |||| ||||||||||| ||  |||| ||||||||||||| ||| |||  | |||    
T  12172214 agatatttggcaagtgaaccaaattcgatcgaagtaataaaaaagatcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaa 12172115  T
Q  304 ggatgtagtaaatttat 320  Q
    ||||||| |||||||||    
T  12172114 ggatgta-taaatttat 12172099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 14701967 - 14701923
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  14701967 gttttgatcaatctcttgaatcaaaaccctttcctaagttataac 14701923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 49636581 - 49636625
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  49636581 gttttgatcaatctcttgaatcaaaaccctttcctaagttataac 49636625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 49639874 - 49639918
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  49639874 gttttgatcaatctcttgaatcaaaaccctttcctaagttataac 49639918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 3719265 - 3719308
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  3719265 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 3719308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 495 - 542
Target Start/End: Complemental strand, 39050649 - 39050602
Alignment:
Q  495 aatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||||    
T  39050649 aatagttttgatcaatcttttgagtcaaaaccctttcttaaattataa 39050602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 2542124 - 2542012
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||||||||||  | |||||| || |||  || ||||||||||||||||| ||  |||| ||||||| ||||| ||| |||  | |||    
T  2542124 agatatttggcaagtgtaccaaagtcaatcgaagtaataaataa-ttcgtatccacgaggactgtatttaacttctactgagcaatttcattattaaaaa 2542026  T
Q  304 ggatgtagtaaatt 317  Q
    ||||||| ||||||    
T  2542025 ggatgtattaaatt 2542012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 21217359 - 21217416
Alignment:
Q  225 aaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 282  Q
    ||||||||| || || ||||||| ||||||| ||||||||||||| ||||||||||||    
T  21217359 aaaactatcaaagtaataataaaattcgtattcacgaggaccgttattaatttctact 21217416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 474
Target Start/End: Original strand, 21217499 - 21217600
Alignment:
Q  373 taaattggtttggaatttataataaaacagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacc 472  Q
    |||||||||||| || ||| | |||||||||||||||| ||||  ||||||||||||  | | |||||||||||| |  |||||| ||| |||||| |||    
T  21217499 taaattggtttgaaaattagattaaaacagataatcaatccttcaaatcctctattgcgcactgtgaataatttgattttcttctctctcaatgttaacc 21217598  T
Q  473 ta 474  Q
    ||    
T  21217599 ta 21217600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 3719553 - 3719597
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||    
T  3719553 gttttgatcaatctcttcaatcaaaaccctttcctaagttataac 3719597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 8871474 - 8871537
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaa--taaagttcgtatccacgaggac 265  Q
    |||||| |||||||||||||||||||||||||| ||||||   |||| |||| |||||||||||    
T  8871474 agatatctggcaagtgtaccaaaaactatcgaagtagtaaagaaaagatcgtctccacgaggac 8871537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 11560886 - 11560831
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||| ||||||||| |||||||||||| ||||| |||||||||||    
T  11560886 attaactaattagttt-gatcaatcttttgactcaaaactctttcctaagttataac 11560831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 26062698 - 26062808
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgagga--ccgttgttaatttctacttagcaagttcgttaaaataaagg 305  Q
    |||||||||||| ||||||| |||||||| || |||  || ||||||||||||||||  |||||||||| ||||||| | ||| ||| |||  | |||||    
T  26062698 atttggcaagtgaaccaaaa-ctatcgaaataataaataaattcgtatccacgaggaccccgttgttaacttctactcaacaatttctttatcaaaaagg 26062796  T
Q  306 atgtagtaaatt 317  Q
    ||||| ||||||    
T  26062797 atgtattaaatt 26062808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 3734662 - 3734619
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||    
T  3734662 agataattggcaagtgtaccaataactatcgaagtagtaataaa 3734619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 14702255 - 14702212
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    ||||||||||||| |||||||| |||||||||| ||||||||||    
T  14702255 agatatttggcaaatgtaccaataactatcgaagtagtaataaa 14702212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 24605051 - 24605121
Alignment:
Q  246 aagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatt 317  Q
    |||||||||||||| ||||| ||| | ||||||||||| ||||   ||||||||||||||||||| ||||||    
T  24605051 aagttcgtatccacaaggactgtt-tcaatttctacttggcaaaaacgttaaaataaaggatgtattaaatt 24605121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 49639586 - 49639629
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||    
T  49639586 agataattggcaagtgtaccaataactatcgaagtagtaataaa 49639629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 543
Target Start/End: Original strand, 33400392 - 33400429
Alignment:
Q  506 tcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  33400392 tcaatctcttgactcaaaactctttcctaagttataac 33400429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 48013158 - 48013233
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaatta--gtaataaagttcgtatccacgaggaccgttgttaatttc 278  Q
    |||| ||| |||||||||| ||||||||||||| ||   |||||||||| || ||||||||||||| ||||||||||    
T  48013158 agatgtttagcaagtgtactaaaaactatcgaagtaatataataaagtttgtttccacgaggaccg-tgttaatttc 48013233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 7394916 - 7394971
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||| | ||| ||||||||||||||||||||||| |||| |||| |||||||||    
T  7394916 attaacttattagctttgatcaatctcttgactcaaagccctatctt-agttataac 7394971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 11561159 - 11561123
Alignment:
Q  211 tggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  11561159 tggcaagtgtacaaaaaactatcgaagtagtaataaa 11561123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 5e-48; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 204 - 336
Target Start/End: Complemental strand, 11411123 - 11410990
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||| ||| ||||||||||||||||||||||| || |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  11411123 agataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgagtaccattgttaatttctacttagcaagttcgttaaaataaa 11411024  T
Q  304 ggatgtagtaaa-tttatgggttgctctaggcag 336  Q
    |||||||||||| |||||||||||| ||||||||    
T  11411023 ggatgtagtaaattttatgggttgccctaggcag 11410990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 204 - 543
Target Start/End: Complemental strand, 12747169 - 12746826
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||| ||| | ||||||||||  ||||   ||||||||||||    
T  12747169 agatatttgacaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggactgtt-tcaatttctactcggcaaaagcgttaaaataaa 12747071  T
Q  304 ggatgtagtaaatttatgggttgctctaggcagctgaatttgg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaaca 401  Q
    ||||||| |||||||||||||||| |||||||| || |||||| ||| |||||| || ||| | | | || |||| |||||||  | ||  | |||||||    
T  12747070 ggatgtattaaatttatgggttgccctaggcagttggatttggttgcaataaaaagtgaataaca-gaaaataaaatggtttgataattggattaaaaca 12746972  T
Q  402 gataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaat 497  Q
    ||| |||||||||||  |||||||||||| ||   |||| ||||||||   |||||| ||| || |   || ||||| || || | |  ||||||||| |    
T  12746971 gatgatcaagcctttcaaatcctctattgctcattgtgagtaatttgcctctcttctctctcaaagaaattaacctagctttacgacggattaactaagt 12746872  T
Q  498 agttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
     ||||||||||||||||||||||||||||||||| |||||||||||    
T  12746871 ggttttgatcaatctcttgactcaaaaccctttcctaagttataac 12746826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 245 - 543
Target Start/End: Original strand, 35026932 - 35027234
Alignment:
Q  245 aaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatttatgggttgctctaggcagctgaattt 344  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||| || ||||    
T  35026932 aaagttcgtatccacaaggaacgttgttaatttctacttaacaagttcgttaaaataaaggatgtattaaatttatgggttgccctaggcagttggattt 35027031  T
Q  345 gg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagataatcaagccttt-gaatcctctattgttcgccgtgaat 441  Q
    || ||| |||||| ||||   |   | || |||| |||||||  | ||  | |||||||||| ||||||||||| ||||||||||||| || |  ||| |    
T  35027032 ggttgcaataaaaagtaa--taacggaaaataaaatggtttgataattggattaaaacagatgatcaagcctttcgaatcctctattgctcactatgagt 35027129  T
Q  442 aatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagtt 538  Q
    |||||||   |||||| ||| || |   || ||||| || || | || ||||||||| | ||||||||||||||||||||||||||||||||| ||||||    
T  35027130 aatttgcctctcttctctctcaaagaaattaacctagctttacgacagattaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagtt 35027229  T
Q  539 ataac 543  Q
    |||||    
T  35027230 ataac 35027234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 206 - 333
Target Start/End: Original strand, 33678947 - 33679076
Alignment:
Q  206 atatttggcaagtgtaccaaaa--actatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||||||||||||||||||||  ||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  33678947 atatttggcaagtgtaccaaaaaaactatcgaagtagtactaaagttcatatccacgaggaccgttgttaatttctacttaacaagttagttaaaataaa 33679046  T
Q  304 ggatgtagtaaatttatgggttgctctagg 333  Q
    |||||||  ||||||||||||||| |||||    
T  33679047 ggatgtatgaaatttatgggttgccctagg 33679076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 204 - 543
Target Start/End: Original strand, 28894239 - 28894582
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||  |||| ||| | ||||||||||  ||||   ||||||||||||    
T  28894239 agatatttgacaagtgtaacaaaagctatcgaagtagtaataaagttcgtatccacatggactgtt-tcaatttctactcggcaaaaacgttaaaataaa 28894337  T
Q  304 ggatgtagtaaatttatgggttgctctaggcagctgaatttgg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaaca 401  Q
    ||||||| |||||||||||||||| |||||||| |  |||||| ||| |||||| |||||| | | | || |||| |||||||  | ||  | |||||||    
T  28894338 ggatgtattaaatttatgggttgccctaggcagttagatttggttgcaataaaaagtaaataaca-gaaaataaaatggtttgataattggattaaaaca 28894436  T
Q  402 gataatcaagc-ctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaat 497  Q
    ||| |||||||  ||||||| |||||||| || | |||| ||||||||   |||||| ||| || |   || ||||| || || ||   ||||||||  |    
T  28894437 gatgatcaagcattttgaattctctattgctcactgtgagtaatttgcctctcttctctctcaaagaaattaacctagctttacggtggattaactatgt 28894536  T
Q  498 agttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
     ||||||||||||||||||||||||||||||||| |||||||||||    
T  28894537 ggttttgatcaatctcttgactcaaaaccctttcctaagttataac 28894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 14790860 - 14790745
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||  | |||    
T  14790860 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaa 14790761  T
Q  304 ggatgtagtaaatttat 320  Q
    ||||||| |||||||||    
T  14790760 ggatgta-taaatttat 14790745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 14795888 - 14795773
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||||||||||||  |||| ||| |||  | |||    
T  14795888 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtacctacgaggaccgttgttaatttctactcggcaatttctttatcaaaaa 14795789  T
Q  304 ggatgtagtaaatttat 320  Q
    ||||||| |||||||||    
T  14795788 ggatgta-taaatttat 14795773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 34502416 - 34502360
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  34502416 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataac 34502360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 487 - 542
Target Start/End: Original strand, 3826863 - 3826918
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  3826863 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataa 3826918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 5618262 - 5618318
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  5618262 attaactaattagttttgatcaatctcttcactcaaaaccctttcctaagttataac 5618318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 7560144 - 7560200
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||    
T  7560144 attaactaattagttttgatcaatctcttgactcaaaactctttcctaagttataac 7560200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 11410838 - 11410782
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||||||  |||||||||||||||||||||||||||||||||| |||||||||||    
T  11410838 attaactaaggagttttgatcaatctcttgactcaaaaccctttcctaagttataac 11410782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 539
Target Start/End: Original strand, 13095764 - 13095816
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagtta 539  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  13095764 attaactaaatagttttgatcaatctcttaactcaaaaccctttcctaagtta 13095816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 17231929 - 17231873
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||    
T  17231929 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagtcataac 17231873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 31123506 - 31123450
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  31123506 attaactaattagttttgatcaatctcttaactcaaaaccctttcctaagttataac 31123450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 487 - 542
Target Start/End: Original strand, 15578960 - 15579015
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||    
T  15578960 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataa 15579015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 2331355 - 2331299
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| || ||||||||||||||||||||||||||| |||| |||||||||||    
T  2331355 attaactaagtacttttgatcaatctcttgactcaaaaccatttcctaagttataac 2331299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 9313830 - 9313886
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  9313830 attaacttattagctttgatcaatctcttgactcaaaaccctttcctaagttataac 9313886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 28117913 - 28117857
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  28117913 attaacttattagctttgatcaatctcttgactcaaaaccctttcctaagttataac 28117857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 33679234 - 33679290
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | ||||||||||||||||| ||||||||||||||| |||||||||||    
T  33679234 attaactaagtggttttgatcaatctcttaactcaaaaccctttcgtaagttataac 33679290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 2331631 - 2331588
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  2331631 agatatttggcaagtgtaccaaaaactatcgaagtagtaataaa 2331588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 19664674 - 19664782
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 307  Q
    |||||||||||| ||||||| |||||||| || |||  || || ||||||||||||||||||||| ||||||||| | ||| ||| |||  | |||||||    
T  19664674 atttggcaagtgaaccaaaa-ctatcgaagtaataaataaatttgtatccacgaggaccgttgtttatttctactcaacaatttctttatcaaaaaggat 19664772  T
Q  308 gtagtaaatt 317  Q
    ||| ||||||    
T  19664773 gtattaaatt 19664782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 22221959 - 22221903
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggac 265  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||| |||||||||||    
T  22221959 atttggcaagtgtaccaaaagctatcgaagtagtaataaa-ttcgtttccacgaggac 22221903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 265
Target Start/End: Complemental strand, 22247794 - 22247738
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggac 265  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||| |||||||||||    
T  22247794 atttggcaagtgtaccaaaagctatcgaagtagtaataaa-ttcgtttccacgaggac 22247738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 320
Target Start/End: Complemental strand, 1838712 - 1838602
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 307  Q
    |||||||||||| |||||||  ||||||| || |||  || ||||||||||| ||||||||||||||||||||||  |||| ||| |||  | |||||||    
T  1838712 atttggcaagtgaaccaaaat-tatcgaagtaataaataaattcgtatccacaaggaccgttgttaatttctactcggcaatttctttatcaaaaaggat 1838614  T
Q  308 gtagtaaatttat 320  Q
    ||| |||||||||    
T  1838613 gta-taaatttat 1838602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 14966304 - 14966248
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||||| || ||||||||    
T  14966304 attaactaagtagatttgatcaatctcttgactcaaacccctttcctaggttataac 14966248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 14969784 - 14969728
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||| || ||||||||    
T  14969784 attaactaagtagatttgatcaatctcttgactcaaaatcctttcataggttataac 14969728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 15535252 - 15535184
Alignment:
Q  249 ttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatt 317  Q
    |||||||||||||||||||||||||| ||||||| ||| | ||| ||| || |||||||||| ||||||    
T  15535252 ttcgtatccacgaggaccgttgttaacttctactcagccatttctttataaaaaaggatgtattaaatt 15535184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 15578763 - 15578807
Alignment:
Q  292 cgttaaaataaaggatgtagtaaatttatgggttgctctaggcag 336  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||    
T  15578763 cgttaaaataaaggatgtattaaatttatgggttgccctaggcag 15578807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 17696664 - 17696608
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | | ||||||||||||||||||||||||||||||  |||||||||||    
T  17696664 attaactaagtggctttgatcaatctcttgactcaaaaccctttactaagttataac 17696608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 265
Target Start/End: Original strand, 23842565 - 23842621
Alignment:
Q  210 ttggcaagtgtaccaaaaactatcgaattagtaata-aagttcgtatccacgaggac 265  Q
    ||||||||||||||||||||||||||| || ||| | ||||||||||||||||||||    
T  23842565 ttggcaagtgtaccaaaaactatcgaaataataaaataagttcgtatccacgaggac 23842621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 22920878 - 22920835
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  22920878 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 22920835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 502 - 543
Target Start/End: Complemental strand, 22920587 - 22920546
Alignment:
Q  502 ttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  22920587 ttgatcaatctcttgaatcaaaaccctttcctaagttataac 22920546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 487 - 528
Target Start/End: Complemental strand, 26391011 - 26390970
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccct 528  Q
    |||||| |||||||||||||||||||||||| ||||||||||    
T  26391011 attaacaaaatagttttgatcaatctcttgattcaaaaccct 26390970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 2330703 - 2330647
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| || ||||||| |||||||||||| |||||| |||| |||||||||||    
T  2330703 attaactaagtacttttgattaatctcttgactgaaaaccatttcataagttataac 2330647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 531
Target Start/End: Complemental strand, 6856656 - 6856612
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttc 531  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||    
T  6856656 attaacttaataattttgatcaatctcttgattcaaaaccctttc 6856612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 7560232 - 7560276
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||||    
T  7560232 gttttgatcaatctcttgactcaaaactctttcctaagctataac 7560276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 11296195 - 11296239
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| |||||||||||||| || |||||||    
T  11296195 gttttgatcaatctcttgattcaaaaccctttctcaaattataac 11296239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 320
Target Start/End: Original strand, 13017193 - 13017307
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||||||||| ||||||  | |||||| || ||| ||||||||| |||||||||||  |  |||| ||||||||||||| ||| |||  | |||    
T  13017193 agatatttggcaagtgaaccaaattcgatcgaagtaataa-aaagttcgtttccacgaggactatatttaacttctacttagcaatttcattattaaaaa 13017291  T
Q  304 ggatgtagtaaatttat 320  Q
    ||||||| |||||||||    
T  13017292 ggatgta-taaatttat 13017307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 23848129 - 23848073
Alignment:
Q  210 ttggcaagtgtaccaaaaactatcgaattagtaata-aagttcgtatccacgaggac 265  Q
    ||||||||||||||||||||||||||  || ||| | ||||||||||||||||||||    
T  23848129 ttggcaagtgtaccaaaaactatcgacataataaaataagttcgtatccacgaggac 23848073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 288
Target Start/End: Complemental strand, 27649338 - 27649259
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 288  Q
    |||||||||||| || |||| |||||||| || |||  ||| ||| ||||||||||||||||||||||| ||||| |||||    
T  27649338 atttggcaagtgaactaaaa-ctatcgaagtaataaataagatcgaatccacgaggaccgttgttaattcctactcagcaa 27649259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 17232204 - 17232161
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||    
T  17232204 agatatttgacaagtgtaccaataactatcgaagtagtaataaa 17232161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 28974140 - 28974226
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataa--agttcgtatccacgaggaccgttgttaatttctacttagcaa 288  Q
    |||||||||||||||||| | |||||||||||| || ||||||  | |  |||||||||||||  ||||||||| || |||||||||    
T  28974140 agatatttggcaagtgtatccaaaactatcgaagtaataataataaatctgtatccacgaggattgttgttaatgtcaacttagcaa 28974226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 17696936 - 17696849
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact-tagcaagttcgtta 296  Q
    |||||||||||||||||  |||||||||| ||||||||||  |||| ||||| ||||| | |||||||||| | | ||||||||||||||    
T  17696936 atttggcaagtgtaccaccaactatcgaagtagtaataaatatcgt-tccacaaggactg-tgttaatttcaattctagcaagttcgtta 17696849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 32427540 - 32427429
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    |||||||||| ||||| ||||||| |||||||| || |||  || || ||||| ||||||||||||||||| ||||||| ||||| ||| |||  | |||    
T  32427540 agatatttggtaagtgaaccaaaa-ctatcgaagtaataaataaatttgtatctacgaggaccgttgttaa-ttctactcagcaatttctttatcaaaaa 32427443  T
Q  304 ggatgtagtaaatt 317  Q
     |||||| ||||||    
T  32427442 agatgtattaaatt 32427429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 531
Target Start/End: Original strand, 28974433 - 28974469
Alignment:
Q  495 aatagttttgatcaatctcttgactcaaaaccctttc 531  Q
    |||||||||||||||||||| || |||||||||||||    
T  28974433 aatagttttgatcaatctctagagtcaaaaccctttc 28974469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 34502677 - 34502614
Alignment:
Q  225 aaaactatcgaattagtaata-aagttcgtatccacgaggaccgttgttaatttctacttagcaa 288  Q
    |||||||||||| |||||| | |||||||||||||||||||| | ||||||| || |||||||||    
T  34502677 aaaactatcgaagtagtaaaataagttcgtatccacgaggactg-tgttaatctcaacttagcaa 34502614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 96; Significance: 8e-47; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 206 - 543
Target Start/End: Original strand, 19515 - 19857
Alignment:
Q  206 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 305  Q
    |||||||||||||||||||||| || || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19515 atatttggcaagtgtaccaaaa-ctgtcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 19613  T
Q  306 atgtagtaaattt-atggg-ttgctctaggcagctgaatttggt-gca-taaaatgtaaatgagatgcaattaaattggtttggaatttataataaaaca 401  Q
    ||||||||||||| ||||| |||| |||||||| || ||||||| ||| ||||| |||| | | | | || |||| |||||||  | ||  | |||||||    
T  19614 atgtagtaaattttatggggttgccctaggcagttggatttggttgcaataaaaagtaa-taaca-gaaaataaaatggtttgataattggattaaaaca 19711  T
Q  402 gataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaat 497  Q
    ||| |||||| |||| |||| |||||||| || |  ||| ||||||||   |||||| ||| || |   || ||||| || || |    ||||||||| |    
T  19712 gatgatcaagactttcgaatactctattgctcacaatgagtaatttgcctctcttctctctcaaagaaattaacctagctttacgaagaattaactaagt 19811  T
Q  498 agttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
     ||||||||||||||||||||||||||||||||| |||||||||||    
T  19812 ggttttgatcaatctcttgactcaaaaccctttcctaagttataac 19857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 204 - 543
Target Start/End: Complemental strand, 4619 - 4276
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||  |||| | | | ||||||||||  | ||   ||||||||||||    
T  4619 agatatttggcaagtgtacaaaaaactatcgaagtagtaataaagtttgtatccacagggactg-tatcaatttctactcggaaaaagcgttaaaataaa 4521  T
Q  304 ggatgtagtaaatttatgggttgctctaggcagctgaatttgg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaaca 401  Q
    ||||||| |||||||||||||||| ||||| |  || |||||| ||| |||||| |||||| | ||  || |||| |||||||  | ||  | |||||||    
T  4520 ggatgtattaaatttatgggttgccctaggaaattggatttggttgcaataaaaagtaaataacat-aaaataaaatggtttgataattggattaaaaca 4422  T
Q  402 gataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaat 497  Q
    ||| ||||||||||| ||||||||||||| || | || | ||||||||  ||||||| ||| || |   || ||||| || |||| |  ||||||||| |    
T  4421 gatgatcaagcctttcgaatcctctattgctcactgtaagtaatttgcctgtcttctctctcaaagaaattaacctagctttatgacggattaactaagt 4322  T
Q  498 agttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
     |||||||||||||| |||||||||||||||||| |||||||||||    
T  4321 ggttttgatcaatcttttgactcaaaaccctttcctaagttataac 4276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 206 - 541
Target Start/End: Complemental strand, 13950 - 13611
Alignment:
Q  206 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 305  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||  |||| ||| | ||||||||||  ||||   ||||||||||||||    
T  13950 atatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacagggactgtt-tcaatttctactcggcaaaagcgttaaaataaagg 13852  T
Q  306 atgtagtaaatttatgggttgctctaggcagctgaatttggt--gcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacaga 403  Q
    ||||| |||||| ||||||||| |||||||| || |||||||    |||||| |||||| | | | || |||| |||||||  | ||  | |||||||||    
T  13851 atgtattaaattgatgggttgccctaggcagttggatttggttaaaataaaaagtaaataaca-gaaaataaaatggtttgataattggattaaaacaga 13753  T
Q  404 taatcaagcctt-tgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatag 499  Q
    | ||||||||||  ||||||||||||| || |  ||| ||||||||   |||||| ||| || |   || ||||| || || | |  ||||||||| | |    
T  13752 tgatcaagccttccgaatcctctattgctcactatgagtaatttgcctctcttctctctcaaagaaattaacctagctttacgacggattaactaagtgg 13653  T
Q  500 ttttgatcaatctcttgactcaaaaccctttcttaagttata 541  Q
    ||||||||||||| |||||||||||||||||| |||||||||    
T  13652 ttttgatcaatctattgactcaaaaccctttcctaagttata 13611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 206 - 347
Target Start/End: Complemental strand, 11607 - 11467
Alignment:
Q  206 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 305  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||||||||||  |||| ||| | ||||| ||||  ||||   ||||||||||||||    
T  11607 atatttggcaagtgtaccaaaagctatcgaagcagtaataaagttcgtatccacagggactgtt-tcaatttatactcggcaaaagcgttaaaataaagg 11509  T
Q  306 atgtagtaaatttatgggttgctctaggcagctgaatttggt 347  Q
    ||||| |||||||||||||| | |||||||| || |||||||    
T  11508 atgtattaaatttatgggtttccctaggcagttggatttggt 11467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 526
Target Start/End: Complemental strand, 5670 - 5631
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaacc 526  Q
    ||||||||| | ||||||||||||||||||||||||||||    
T  5670 attaactaagtggttttgatcaatctcttgactcaaaacc 5631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 208 - 335
Target Start/End: Original strand, 90306 - 90432
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 307  Q
    |||||||||||||||||||| |||||||| || |||||||||||||||||||  |||| ||| | ||||||||||  ||||   ||||||||||||||||    
T  90306 atttggcaagtgtaccaaaagctatcgaagtactaataaagttcgtatccacatggactgtt-tcaatttctactcggcaaaagcgttaaaataaaggat 90404  T
Q  308 gtagtaaatttatgggttgctctaggca 335  Q
    ||| |||||||||||||||| |||||||    
T  90405 gtattaaatttatgggttgccctaggca 90432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 448
Target Start/End: Complemental strand, 42961 - 42716
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 303  Q
    ||||||||| |||||||||||||| |||||||| | |||||||||||||||| |||  |||| ||| | || |||||||  ||||   ||||||||||||    
T  42961 agatatttgtcaagtgtaccaaaagctatcgaagtcgtaataaagttcgtattcacagggactgtt-tcaacttctactcggcaaaaacgttaaaataaa 42863  T
Q  304 ggatgtagtaaatttatgggttgctctaggcagctgaatttgg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaaca 401  Q
    ||||||| ||||||||||| || | |||||||  || |||||| ||| |||||| |||||| | | | || |||| |||||||  | ||  | |||||||    
T  42862 ggatgtattaaatttatggatttccctaggcatttggatttggttgcaataaaaagtaaataaca-gaaaataaaatggtttgataattggattaaaaca 42764  T
Q  402 gataatcaagccttt-gaatcctctattgttcgccgtgaataatttgc 448  Q
    ||| ||||||||||| ||||||||||||| || | |||| ||||||||    
T  42763 gatgatcaagcctttcgaatcctctattgctcactgtgagtaatttgc 42716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 29395 - 29339
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||    
T  29395 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataac 29339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 53192 - 53136
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||    
T  53192 attaactaagtggttttgatcaatctcttgactcaaaaccccttcttaagttataac 53136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 2527 - 2471
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  2527 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataac 2471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 6359 - 6303
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||    
T  6359 attaattaagtagttttgatcaatctcttgactcaaaatcctttcctaagttataac 6303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 395 - 543
Target Start/End: Complemental strand, 92601 - 92450
Alignment:
Q  395 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg--ttcacctaactctatggcatattaa 491  Q
    |||||||||| ||||||||||| |||||||||||||||| | |||| ||||||||   |||||| ||| ||    || ||||| || || | |  |||||    
T  92601 taaaacagatgatcaagcctttcgaatcctctattgttcactgtgagtaatttgcctctcttctctctcaagaaattaacctagctttacgacggattaa 92502  T
Q  492 ctaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||| | ||||||||||||||||||||||||||||||||| |||||||||||    
T  92501 ctaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataac 92450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 208 - 317
Target Start/End: Original strand, 2627 - 2734
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 307  Q
    |||||||||||| ||||||| |||||||| || |||  ||| ||||||||||||||||||||||||| ||||||| ||||| |||||||  | |||||||    
T  2627 atttggcaagtggaccaaaa-ctatcgaagtaataaataagatcgtatccacgaggaccgttgttaacttctactcagcaatttcgttatca-aaaggat 2724  T
Q  308 gtagtaaatt 317  Q
    ||| ||||||    
T  2725 gtattaaatt 2734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 52927 - 52983
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  52927 attaactaagtagttttgatcaatctcttgactcgaaaccctttcctaagttataac 52983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 67876 - 67932
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  67876 attaactaagtagttttgatcaatctcttgactcgaaaccctttcctaagttataac 67932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 487 - 542
Target Start/End: Complemental strand, 228707 - 228652
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 542  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  228707 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagtaataa 228652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 20129 - 20073
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||    
T  20129 attaacaaattagttttgatcaatctcttgactcaaaactctttcctaagttataac 20073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 13679 - 13624
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||  ||||||||||||||||||||| ||||| |||||||||||    
T  13679 attaactaattagtttc-atcaatctcttgactcaaaactctttcctaagttataac 13624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 27695 - 27640
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||| ||||||  ||||||||||||||||||||| ||||| |||||||||||    
T  27695 attaactaattagtttc-atcaatctcttgactcaaaactctttcctaagttataac 27640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 317
Target Start/End: Complemental strand, 3713 - 3635
Alignment:
Q  239 agtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatt 317  Q
    ||||||||| || ||||||||||||||||||||||| ||||||| ||||| ||  |||| ||||| |||||| ||||||    
T  3713 agtaataaaatttgtatccacgaggaccgttgttaacttctactcagcaatttaattaagataaatgatgtattaaatt 3635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 523
Target Start/End: Original strand, 468418 - 468544
Alignment:
Q  395 taaaacagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaacta 494  Q
    ||||||| || |||||||||| ||||  ||||||| || | ||||||||||||||  |||||| ||  ||||||||||||  | || | || ||||||      
T  468418 taaaacatatgatcaagccttcgaattgtctattgctcactgtgaataatttgctcctcttctctc--aatgttcacctagttttacgacagattaaccc 468515  T
Q  495 aatagttttgatcaatctcttgactcaaa 523  Q
    ||||||||||||||||||||||| |||||    
T  468516 aatagttttgatcaatctcttgaatcaaa 468544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 28428 - 28471
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  28428 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 28471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 28704 - 28760
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||| || || ||||||| |||||||||| ||||||||||||| |||||||||||    
T  28704 attaacaaattaattttgataaatctcttgaatcaaaaccctttcctaagttataac 28760  T

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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 26647 - 26690
Alignment:
Q  204 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  26647 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 26690  T

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Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 26935 - 26979
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||| ||||||||||||| ||||| |||||    
T  26935 gttttgatcaatctcttgagtcaaaaccctttcctaagtcataac 26979  T

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Target: scaffold0264 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 24193 - 24266
Alignment:
Q  208 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 282  Q
    |||||||||||||||||||| |||||||| |||||||||| || || ||||||||||| ||  |||| |||||||    
T  24193 atttggcaagtgtaccaaaagctatcgaagtagtaataaa-tttgtttccacgaggactgtatttaacttctact 24266  T

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Target: scaffold0134 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 502 - 543
Target Start/End: Complemental strand, 7296 - 7255
Alignment:
Q  502 ttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  7296 ttgatcaatctcttgactcaaaaccttttcctaagttataac 7255  T

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Target: scaffold1048 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1048
Description:

Target: scaffold1048; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 543
Target Start/End: Complemental strand, 1463 - 1419
Alignment:
Q  499 gttttgatcaatctcttgactcaaaaccctttcttaagttataac 543  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||    
T  1463 gttttgatcaatatcttgaatcaaaaccctttcctaagttataac 1419  T

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Target: scaffold1431 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 530
Target Start/End: Original strand, 475 - 518
Alignment:
Q  487 attaactaaatagttttgatcaatctcttgactcaaaacccttt 530  Q
    |||||| |||||||||||||||||||||||| |||||| |||||    
T  475 attaacaaaatagttttgatcaatctcttgagtcaaaatccttt 518  T

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Target: scaffold0067 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 247
Target Start/End: Complemental strand, 27705 - 27668
Alignment:
Q  210 ttggcaagtgtaccaaaaactatcgaattagtaataaa 247  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  27705 ttggcaagtgtaccaataactatcgaagtagtaataaa 27668  T

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