View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11518_low_2 (Length: 662)

Name: NF11518_low_2
Description: NF11518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11518_low_2
NF11518_low_2
[»] chr3 (73 HSPs)
chr3 (188-368)||(9595867-9596047)
chr3 (187-367)||(26662424-26662604)
chr3 (187-367)||(46237644-46237824)
chr3 (187-367)||(9106267-9106447)
chr3 (188-368)||(19284670-19284850)
chr3 (188-367)||(3475294-3475473)
chr3 (187-368)||(30947797-30947978)
chr3 (185-368)||(47335031-47335219)
chr3 (187-368)||(2941812-2941993)
chr3 (188-366)||(33413899-33414078)
chr3 (187-369)||(6097570-6097752)
chr3 (188-368)||(54379162-54379341)
chr3 (188-363)||(26960630-26960805)
chr3 (187-367)||(10986352-10986532)
chr3 (195-266)||(50755163-50755234)
chr3 (188-266)||(19384376-19384454)
chr3 (188-266)||(51361518-51361596)
chr3 (306-364)||(51846785-51846843)
chr3 (187-241)||(8719133-8719187)
chr3 (187-241)||(9071020-9071074)
chr3 (188-236)||(34562394-34562442)
chr3 (306-364)||(34563352-34563410)
chr3 (306-364)||(41192355-41192413)
chr3 (299-368)||(47728387-47728456)
chr3 (298-367)||(51681999-51682068)
chr3 (299-367)||(19385313-19385380)
chr3 (299-367)||(51362436-51362503)
chr3 (299-363)||(53594972-53595036)
chr3 (216-259)||(31853164-31853207)
chr3 (188-237)||(16276664-16276713)
chr3 (188-236)||(41191404-41191452)
chr3 (301-368)||(7045300-7045366)
chr3 (194-237)||(8036801-8036844)
chr3 (195-234)||(19385334-19385373)
chr3 (308-367)||(23755285-23755344)
chr3 (194-237)||(36185905-36185948)
chr3 (194-237)||(50416481-50416524)
chr3 (194-237)||(50416564-50416607)
chr3 (195-234)||(51362457-51362496)
chr3 (191-228)||(17620734-17620771)
chr3 (195-236)||(47924367-47924408)
chr3 (195-235)||(8718108-8718148)
chr3 (195-235)||(9069995-9070035)
chr3 (195-235)||(27446215-27446255)
chr3 (301-365)||(50754008-50754071)
chr3 (223-266)||(7044387-7044430)
chr3 (194-237)||(8036989-8037032)
chr3 (194-237)||(12974013-12974056)
chr3 (194-237)||(12974191-12974233)
chr3 (195-234)||(16277433-16277472)
chr3 (194-237)||(19012562-19012605)
chr3 (304-367)||(23699327-23699390)
chr3 (304-367)||(23717782-23717845)
chr3 (304-367)||(23736238-23736301)
chr3 (310-365)||(32232993-32233048)
chr3 (194-237)||(36185727-36185770)
chr3 (194-237)||(49053426-49053469)
chr3 (195-234)||(50754013-50754052)
chr3 (301-340)||(52987650-52987689)
chr3 (301-367)||(8718101-8718166)
chr3 (301-367)||(9069988-9070053)
chr3 (301-367)||(28299952-28300018)
chr3 (195-237)||(47225848-47225890)
chr3 (196-237)||(21175268-21175309)
chr3 (202-239)||(23756295-23756332)
chr3 (188-233)||(40220788-40220833)
chr3 (236-265)||(47729134-47729163)
chr3 (201-234)||(52987669-52987702)
chr3 (236-264)||(23700056-23700084)
chr3 (236-264)||(23718511-23718539)
chr3 (236-264)||(23736967-23736995)
chr3 (299-363)||(37319458-37319522)
chr3 (299-363)||(39195106-39195170)
[»] chr7 (54 HSPs)
chr7 (8-186)||(31963942-31964116)
chr7 (188-367)||(30884109-30884288)
chr7 (188-367)||(31660069-31660248)
chr7 (188-367)||(46358520-46358699)
chr7 (182-367)||(763697-763882)
chr7 (190-367)||(16933132-16933310)
chr7 (190-367)||(16938515-16938693)
chr7 (188-368)||(47340145-47340326)
chr7 (188-369)||(41910999-41911177)
chr7 (187-352)||(35736963-35737128)
chr7 (187-266)||(46572568-46572647)
chr7 (188-266)||(32685839-32685917)
chr7 (278-367)||(20000651-20000740)
chr7 (194-266)||(48692021-48692093)
chr7 (189-266)||(15973856-15973933)
chr7 (76-186)||(31975336-31975447)
chr7 (301-367)||(5757386-5757452)
chr7 (188-242)||(34228600-34228654)
chr7 (299-364)||(11732645-11732710)
chr7 (299-363)||(34875493-34875557)
chr7 (103-186)||(31948941-31949024)
chr7 (188-235)||(48830601-48830648)
chr7 (306-364)||(24359874-24359932)
chr7 (187-236)||(11732036-11732085)
chr7 (299-368)||(44141249-44141318)
chr7 (189-237)||(46025060-46025108)
chr7 (187-237)||(33798733-33798783)
chr7 (299-368)||(39007647-39007716)
chr7 (299-367)||(15974934-15975001)
chr7 (188-236)||(24360756-24360804)
chr7 (195-234)||(15974955-15974994)
chr7 (194-237)||(26945714-26945757)
chr7 (195-234)||(30428880-30428919)
chr7 (194-237)||(38837729-38837772)
chr7 (194-237)||(44426599-44426642)
chr7 (194-259)||(48306331-48306392)
chr7 (187-233)||(12286723-12286769)
chr7 (301-367)||(30428873-30428938)
chr7 (301-367)||(46024027-46024092)
chr7 (194-235)||(924498-924539)
chr7 (194-235)||(46004537-46004578)
chr7 (299-367)||(25778837-25778904)
chr7 (181-237)||(44426799-44426855)
chr7 (195-234)||(12279752-12279791)
chr7 (194-237)||(31365272-31365315)
chr7 (194-237)||(34227677-34227720)
chr7 (194-237)||(43742250-43742293)
chr7 (195-234)||(48690902-48690941)
chr7 (310-367)||(6797394-6797451)
chr7 (194-235)||(7845099-7845140)
chr7 (194-235)||(34227878-34227919)
chr7 (194-235)||(41065971-41066012)
chr7 (202-234)||(28396736-28396768)
chr7 (236-264)||(46025013-46025041)
[»] chr1 (82 HSPs)
chr1 (191-367)||(49936827-49937003)
chr1 (188-368)||(24635925-24636105)
chr1 (188-367)||(20434609-20434788)
chr1 (187-368)||(48762217-48762398)
chr1 (187-367)||(19897646-19897826)
chr1 (188-367)||(25888916-25889094)
chr1 (188-367)||(43452542-43452721)
chr1 (187-367)||(16975954-16976135)
chr1 (188-367)||(6314115-6314295)
chr1 (188-368)||(18618834-18619013)
chr1 (214-368)||(50351802-50351956)
chr1 (188-265)||(23817412-23817489)
chr1 (188-266)||(11422541-11422619)
chr1 (188-265)||(23920966-23921043)
chr1 (194-266)||(23174403-23174475)
chr1 (288-367)||(4097895-4097974)
chr1 (187-266)||(21641588-21641667)
chr1 (288-367)||(34369660-34369739)
chr1 (188-266)||(4097105-4097182)
chr1 (290-368)||(11421593-11421671)
chr1 (288-364)||(23175509-23175585)
chr1 (279-367)||(28375464-28375552)
chr1 (183-265)||(180825-180907)
chr1 (188-239)||(21255835-21255886)
chr1 (306-364)||(21256777-21256835)
chr1 (299-363)||(31529663-31529727)
chr1 (301-367)||(37639341-37639407)
chr1 (187-235)||(31084404-31084452)
chr1 (299-363)||(33097409-33097473)
chr1 (301-368)||(18056783-18056849)
chr1 (188-239)||(18057807-18057858)
chr1 (187-237)||(17893066-17893116)
chr1 (306-364)||(31083365-31083423)
chr1 (301-367)||(35198181-35198247)
chr1 (194-235)||(31763776-31763817)
chr1 (217-266)||(34370488-34370537)
chr1 (302-363)||(51801734-51801795)
chr1 (214-266)||(8401423-8401475)
chr1 (299-363)||(44260522-44260586)
chr1 (299-363)||(44688608-44688672)
chr1 (194-237)||(9628599-9628642)
chr1 (195-234)||(18056791-18056830)
chr1 (194-237)||(33156993-33157036)
chr1 (321-360)||(37228364-37228403)
chr1 (194-237)||(42134133-42134176)
chr1 (306-364)||(20507286-20507344)
chr1 (186-236)||(32595284-32595334)
chr1 (194-235)||(1395353-1395394)
chr1 (194-235)||(10974634-10974675)
chr1 (184-237)||(12796414-12796467)
chr1 (194-235)||(14229173-14229214)
chr1 (194-235)||(17893275-17893316)
chr1 (196-237)||(45849111-45849152)
chr1 (304-368)||(22348038-22348101)
chr1 (194-233)||(9041055-9041094)
chr1 (194-237)||(14229361-14229404)
chr1 (198-237)||(18928783-18928822)
chr1 (194-237)||(18928955-18928998)
chr1 (195-234)||(22348046-22348085)
chr1 (189-236)||(23319011-23319058)
chr1 (194-237)||(31763973-31764016)
chr1 (194-237)||(32595105-32595148)
chr1 (321-360)||(41033946-41033985)
chr1 (188-235)||(45890595-45890642)
chr1 (194-236)||(32143770-32143812)
chr1 (306-368)||(41033261-41033322)
chr1 (194-236)||(42133945-42133987)
chr1 (194-235)||(12070612-12070653)
chr1 (237-266)||(16116998-16117027)
chr1 (194-235)||(17811285-17811326)
chr1 (192-233)||(19861717-19861758)
chr1 (236-265)||(23319078-23319107)
chr1 (194-235)||(29945418-29945459)
chr1 (196-237)||(45849309-45849350)
chr1 (197-234)||(45889605-45889642)
chr1 (317-365)||(13590469-13590517)
chr1 (201-237)||(14389852-14389888)
chr1 (202-234)||(16115865-16115897)
chr1 (304-340)||(16115877-16115913)
chr1 (342-370)||(19841483-19841511)
chr1 (188-216)||(23276984-23277012)
chr1 (299-367)||(28323330-28323398)
[»] chr5 (56 HSPs)
chr5 (188-367)||(26637724-26637903)
chr5 (183-367)||(14394468-14394652)
chr5 (188-363)||(14940243-14940418)
chr5 (188-368)||(37456679-37456859)
chr5 (188-368)||(15416663-15416843)
chr5 (188-367)||(3883922-3884101)
chr5 (188-367)||(13552983-13553162)
chr5 (188-284)||(30783541-30783636)
chr5 (286-367)||(30783435-30783516)
chr5 (188-266)||(28069242-28069320)
chr5 (299-367)||(16552637-16552705)
chr5 (301-365)||(16668794-16668858)
chr5 (299-367)||(33868155-33868223)
chr5 (189-239)||(13363792-13363842)
chr5 (184-230)||(23948588-23948634)
chr5 (212-266)||(34330157-34330211)
chr5 (301-365)||(13362772-13362835)
chr5 (187-235)||(23155519-23155567)
chr5 (187-239)||(23334705-23334756)
chr5 (301-365)||(25017217-25017280)
chr5 (194-237)||(11660982-11661025)
chr5 (195-234)||(13362777-13362816)
chr5 (194-237)||(20696327-20696370)
chr5 (194-237)||(22695540-22695583)
chr5 (195-234)||(25017236-25017275)
chr5 (195-234)||(28070172-28070211)
chr5 (194-237)||(39861780-39861823)
chr5 (187-233)||(25189816-25189862)
chr5 (301-367)||(28070153-28070218)
chr5 (301-367)||(34329127-34329192)
chr5 (194-235)||(3340591-3340632)
chr5 (194-235)||(15559050-15559091)
chr5 (202-239)||(16667667-16667704)
chr5 (302-362)||(4674965-4675025)
chr5 (301-365)||(18465556-18465620)
chr5 (194-237)||(20134200-20134243)
chr5 (194-237)||(20134399-20134442)
chr5 (194-237)||(22671997-22672040)
chr5 (195-234)||(23335726-23335765)
chr5 (192-235)||(25671290-25671333)
chr5 (195-234)||(34329134-34329173)
chr5 (194-237)||(35662068-35662111)
chr5 (194-237)||(35662233-35662276)
chr5 (194-237)||(39861580-39861623)
chr5 (236-266)||(16667721-16667751)
chr5 (195-237)||(22830788-22830830)
chr5 (195-237)||(23155843-23155885)
chr5 (237-266)||(2826098-2826127)
chr5 (196-237)||(5630271-5630312)
chr5 (194-235)||(11660794-11660835)
chr5 (194-235)||(16552248-16552289)
chr5 (194-235)||(39086518-39086559)
chr5 (192-237)||(39166150-39166195)
chr5 (194-235)||(39166342-39166383)
chr5 (195-235)||(703732-703772)
chr5 (194-237)||(15059633-15059677)
[»] chr2 (61 HSPs)
chr2 (188-367)||(7487141-7487320)
chr2 (188-368)||(8149830-8150010)
chr2 (188-368)||(8154454-8154634)
chr2 (187-368)||(15016452-15016633)
chr2 (188-368)||(39355034-39355214)
chr2 (187-367)||(1292065-1292245)
chr2 (190-365)||(34464713-34464888)
chr2 (226-367)||(9143585-9143726)
chr2 (546-645)||(543072-543171)
chr2 (187-266)||(18297162-18297241)
chr2 (194-266)||(25193962-25194034)
chr2 (288-374)||(2263566-2263652)
chr2 (306-367)||(18762867-18762928)
chr2 (368-420)||(543318-543370)
chr2 (188-235)||(41345082-41345129)
chr2 (216-277)||(18762927-18762988)
chr2 (301-368)||(18298111-18298177)
chr2 (299-365)||(5098718-5098784)
chr2 (306-364)||(41346045-41346103)
chr2 (299-367)||(25995286-25995354)
chr2 (224-259)||(4578590-4578625)
chr2 (195-234)||(18298130-18298169)
chr2 (195-234)||(20709781-20709820)
chr2 (321-360)||(21155441-21155480)
chr2 (301-368)||(25192891-25192957)
chr2 (195-234)||(25192899-25192938)
chr2 (321-360)||(27974291-27974330)
chr2 (321-360)||(28060820-28060859)
chr2 (194-237)||(31783794-31783837)
chr2 (194-237)||(34726605-34726648)
chr2 (194-236)||(20661397-20661439)
chr2 (301-367)||(20709774-20709839)
chr2 (229-266)||(2264625-2264662)
chr2 (194-235)||(24183599-24183640)
chr2 (194-235)||(37867155-37867196)
chr2 (202-239)||(43823873-43823910)
chr2 (195-235)||(19246664-19246704)
chr2 (299-367)||(36636935-36637003)
chr2 (299-351)||(39548058-39548110)
chr2 (226-261)||(14550465-14550500)
chr2 (194-237)||(16111705-16111748)
chr2 (194-237)||(20661595-20661638)
chr2 (194-237)||(22596305-22596348)
chr2 (194-237)||(22596504-22596547)
chr2 (194-237)||(31711511-31711554)
chr2 (194-237)||(34726796-34726839)
chr2 (307-362)||(40853685-40853740)
chr2 (194-237)||(42364693-42364736)
chr2 (301-372)||(44352679-44352749)
chr2 (194-237)||(44915491-44915534)
chr2 (301-367)||(4281788-4281854)
chr2 (299-353)||(16142073-16142127)
chr2 (194-235)||(12449055-12449096)
chr2 (194-235)||(12449245-12449286)
chr2 (301-366)||(14551319-14551382)
chr2 (194-235)||(25575324-25575365)
chr2 (194-235)||(37867357-37867398)
chr2 (194-235)||(42364493-42364534)
chr2 (299-363)||(13081858-13081922)
chr2 (201-237)||(15252847-15252883)
chr2 (192-236)||(36635754-36635798)
[»] scaffold0045 (1 HSPs)
scaffold0045 (187-368)||(33683-33864)
[»] chr4 (96 HSPs)
chr4 (187-367)||(11785974-11786154)
chr4 (187-367)||(11798141-11798321)
chr4 (191-367)||(13635615-13635791)
chr4 (188-367)||(15051023-15051202)
chr4 (187-368)||(49425943-49426124)
chr4 (192-367)||(30597699-30597874)
chr4 (188-367)||(27865624-27865803)
chr4 (188-367)||(49492399-49492578)
chr4 (202-367)||(51921166-51921331)
chr4 (188-367)||(53441320-53441499)
chr4 (223-370)||(1621872-1622020)
chr4 (187-367)||(46672439-46672618)
chr4 (204-367)||(35291451-35291614)
chr4 (215-367)||(36011843-36011995)
chr4 (213-367)||(55765481-55765635)
chr4 (185-266)||(45256866-45256947)
chr4 (190-265)||(50644642-50644717)
chr4 (196-266)||(638965-639035)
chr4 (188-266)||(10473619-10473697)
chr4 (189-266)||(26577257-26577334)
chr4 (295-367)||(10472497-10472569)
chr4 (288-367)||(26578176-26578255)
chr4 (288-365)||(38244946-38245023)
chr4 (194-266)||(51836328-51836400)
chr4 (187-239)||(30358835-30358887)
chr4 (299-369)||(25574126-25574196)
chr4 (301-364)||(1729615-1729678)
chr4 (188-239)||(22180201-22180252)
chr4 (310-364)||(20861583-20861637)
chr4 (306-364)||(30357810-30357868)
chr4 (306-363)||(38010145-38010202)
chr4 (187-237)||(25715637-25715687)
chr4 (192-237)||(54895583-54895628)
chr4 (299-363)||(16298925-16298989)
chr4 (305-365)||(24686574-24686634)
chr4 (226-266)||(38245889-38245929)
chr4 (299-367)||(50643743-50643810)
chr4 (321-360)||(805109-805148)
chr4 (194-237)||(8165763-8165806)
chr4 (194-237)||(17109918-17109961)
chr4 (194-237)||(21995671-21995714)
chr4 (195-234)||(22181264-22181303)
chr4 (195-234)||(27764247-27764286)
chr4 (194-237)||(30779344-30779387)
chr4 (195-234)||(36621720-36621759)
chr4 (194-237)||(36924242-36924285)
chr4 (194-237)||(37059712-37059755)
chr4 (195-234)||(45255982-45256021)
chr4 (195-234)||(50643750-50643789)
chr4 (194-237)||(53865243-53865286)
chr4 (194-236)||(1492673-1492715)
chr4 (301-367)||(26447412-26447477)
chr4 (301-367)||(27764240-27764305)
chr4 (194-236)||(33819692-33819734)
chr4 (301-363)||(36621701-36621762)
chr4 (301-367)||(45255975-45256040)
chr4 (187-233)||(50070713-50070759)
chr4 (188-237)||(1728620-1728669)
chr4 (194-235)||(2124345-2124386)
chr4 (194-235)||(6841822-6841863)
chr4 (195-236)||(8157290-8157331)
chr4 (299-364)||(22181243-22181307)
chr4 (194-235)||(31763110-31763151)
chr4 (196-237)||(36309419-36309460)
chr4 (202-239)||(48076921-48076958)
chr4 (188-233)||(55782641-55782686)
chr4 (188-233)||(55846821-55846866)
chr4 (189-233)||(14499247-14499291)
chr4 (188-236)||(21098133-21098181)
chr4 (198-234)||(26447431-26447467)
chr4 (194-237)||(2124545-2124588)
chr4 (301-340)||(4168384-4168423)
chr4 (196-235)||(8242615-8242654)
chr4 (194-237)||(12722938-12722981)
chr4 (194-237)||(17109720-17109763)
chr4 (194-237)||(25715727-25715770)
chr4 (194-237)||(38563806-38563849)
chr4 (194-237)||(43374448-43374491)
chr4 (197-236)||(51076901-51076940)
chr4 (194-237)||(54895405-54895448)
chr4 (301-335)||(637885-637919)
chr4 (299-365)||(29826604-29826669)
chr4 (195-233)||(29826626-29826664)
chr4 (195-237)||(33883483-33883525)
chr4 (194-236)||(36309618-36309660)
chr4 (301-367)||(50563729-50563794)
chr4 (194-235)||(562776-562817)
chr4 (236-265)||(9551625-9551654)
chr4 (194-235)||(9813147-9813188)
chr4 (194-235)||(31762930-31762971)
chr4 (194-235)||(33883295-33883336)
chr4 (194-235)||(38010712-38010753)
chr4 (194-235)||(43375523-43375564)
chr4 (202-239)||(50562679-50562716)
chr4 (194-237)||(12722738-12722782)
chr4 (202-234)||(48077864-48077896)
[»] chr6 (45 HSPs)
chr6 (188-367)||(1449542-1449721)
chr6 (188-368)||(15493173-15493353)
chr6 (188-363)||(6900807-6900982)
chr6 (187-367)||(7089082-7089262)
chr6 (187-369)||(31216660-31216842)
chr6 (222-367)||(1536817-1536962)
chr6 (188-284)||(34869950-34870046)
chr6 (286-366)||(34870071-34870151)
chr6 (187-262)||(878365-878440)
chr6 (306-364)||(30908655-30908713)
chr6 (188-235)||(7765406-7765453)
chr6 (190-239)||(30909437-30909486)
chr6 (213-266)||(35121490-35121542)
chr6 (301-367)||(35119239-35119300)
chr6 (195-236)||(15034992-15035033)
chr6 (188-233)||(18755658-18755703)
chr6 (213-266)||(33345356-33345408)
chr6 (309-364)||(7764444-7764499)
chr6 (195-234)||(12394399-12394438)
chr6 (304-367)||(33346374-33346436)
chr6 (195-234)||(33346390-33346429)
chr6 (194-236)||(19284372-19284414)
chr6 (194-236)||(21384990-21385032)
chr6 (232-266)||(24736574-24736608)
chr6 (232-266)||(24736610-24736644)
chr6 (194-235)||(10588955-10588996)
chr6 (194-235)||(22857489-22857530)
chr6 (301-365)||(18611190-18611254)
chr6 (192-239)||(4101964-4102011)
chr6 (194-237)||(14237779-14237822)
chr6 (202-241)||(18612358-18612397)
chr6 (192-235)||(20522850-20522893)
chr6 (301-372)||(22042300-22042370)
chr6 (194-237)||(22857677-22857720)
chr6 (194-237)||(25119470-25119513)
chr6 (299-353)||(4338618-4338672)
chr6 (194-236)||(10698578-10698620)
chr6 (299-353)||(16968021-16968075)
chr6 (301-335)||(24737691-24737725)
chr6 (187-233)||(28132783-28132829)
chr6 (194-235)||(19281284-19281325)
chr6 (194-235)||(25119107-25119148)
chr6 (308-364)||(12394387-12394442)
chr6 (310-362)||(27079939-27079991)
chr6 (195-227)||(34399648-34399680)
[»] scaffold0074 (2 HSPs)
scaffold0074 (188-368)||(24273-24453)
scaffold0074 (188-225)||(44777-44814)
[»] chr8 (68 HSPs)
chr8 (188-368)||(19784270-19784450)
chr8 (187-367)||(10237354-10237534)
chr8 (188-367)||(41099182-41099364)
chr8 (188-367)||(34633208-34633387)
chr8 (188-367)||(41451105-41451284)
chr8 (188-367)||(1149910-1150089)
chr8 (188-367)||(30413914-30414093)
chr8 (187-368)||(15227029-15227210)
chr8 (226-368)||(7857679-7857821)
chr8 (223-367)||(43690640-43690784)
chr8 (187-266)||(4835512-4835591)
chr8 (196-265)||(1209758-1209827)
chr8 (194-266)||(39657709-39657781)
chr8 (188-265)||(2751207-2751284)
chr8 (204-266)||(4840974-4841036)
chr8 (194-258)||(7059144-7059208)
chr8 (306-364)||(9852273-9852331)
chr8 (306-364)||(34648133-34648191)
chr8 (188-236)||(35301624-35301672)
chr8 (304-367)||(15260854-15260917)
chr8 (306-360)||(23396484-23396538)
chr8 (188-241)||(15259850-15259903)
chr8 (187-239)||(23397441-23397493)
chr8 (301-367)||(32987445-32987510)
chr8 (306-364)||(35302591-35302649)
chr8 (318-364)||(40023279-40023325)
chr8 (191-236)||(34647169-34647214)
chr8 (187-239)||(9853254-9853306)
chr8 (299-363)||(13526669-13526733)
chr8 (299-363)||(13616204-13616268)
chr8 (188-236)||(39023000-39023048)
chr8 (299-367)||(42433701-42433768)
chr8 (195-234)||(1208716-1208755)
chr8 (194-237)||(17792892-17792935)
chr8 (195-234)||(32987464-32987503)
chr8 (194-237)||(35448610-35448653)
chr8 (195-234)||(39021982-39022021)
chr8 (304-363)||(40247288-40247347)
chr8 (195-237)||(1672931-1672973)
chr8 (310-368)||(2522866-2522924)
chr8 (195-237)||(27506708-27506750)
chr8 (301-367)||(39021975-39022040)
chr8 (195-233)||(42433708-42433746)
chr8 (188-233)||(42434566-42434611)
chr8 (301-341)||(8550529-8550569)
chr8 (191-235)||(40022386-40022430)
chr8 (192-235)||(185880-185923)
chr8 (195-234)||(7058121-7058160)
chr8 (194-237)||(15808886-15808929)
chr8 (194-237)||(17656619-17656662)
chr8 (194-237)||(23567487-23567530)
chr8 (194-237)||(23567643-23567686)
chr8 (546-621)||(37602306-37602381)
chr8 (301-367)||(1208709-1208774)
chr8 (205-239)||(1672769-1672803)
chr8 (301-335)||(4836701-4836735)
chr8 (301-335)||(4842146-4842180)
chr8 (317-363)||(10443586-10443632)
chr8 (301-367)||(12355422-12355488)
chr8 (187-233)||(17232881-17232926)
chr8 (194-236)||(18757329-18757371)
chr8 (191-233)||(40004716-40004758)
chr8 (305-367)||(40012186-40012247)
chr8 (194-235)||(10586063-10586104)
chr8 (194-235)||(15809842-15809883)
chr8 (196-237)||(21120195-21120236)
chr8 (194-235)||(24473246-24473287)
chr8 (299-363)||(28698578-28698643)
[»] scaffold0581 (1 HSPs)
scaffold0581 (213-368)||(8333-8488)
[»] scaffold0571 (2 HSPs)
scaffold0571 (187-284)||(539-636)
scaffold0571 (286-368)||(661-743)
[»] scaffold0338 (1 HSPs)
scaffold0338 (195-266)||(6484-6555)
[»] scaffold0238 (2 HSPs)
scaffold0238 (299-367)||(25230-25297)
scaffold0238 (195-234)||(25251-25290)
[»] scaffold0544 (2 HSPs)
scaffold0544 (195-234)||(10694-10733)
scaffold0544 (301-366)||(10675-10739)
[»] scaffold0194 (2 HSPs)
scaffold0194 (187-239)||(28673-28725)
scaffold0194 (236-264)||(28628-28656)
[»] scaffold0516 (1 HSPs)
scaffold0516 (194-237)||(1248-1291)
[»] scaffold0249 (2 HSPs)
scaffold0249 (194-237)||(23545-23588)
scaffold0249 (196-236)||(23736-23776)
[»] scaffold0097 (2 HSPs)
scaffold0097 (195-234)||(13620-13659)
scaffold0097 (301-367)||(13613-13678)
[»] scaffold0050 (1 HSPs)
scaffold0050 (190-233)||(20974-21017)
[»] scaffold0102 (1 HSPs)
scaffold0102 (194-236)||(33617-33659)
[»] scaffold0009 (2 HSPs)
scaffold0009 (187-237)||(51899-51949)
scaffold0009 (194-239)||(202913-202958)
[»] scaffold0221 (1 HSPs)
scaffold0221 (188-233)||(20479-20524)
[»] scaffold0129 (1 HSPs)
scaffold0129 (194-235)||(20122-20163)
[»] scaffold0460 (1 HSPs)
scaffold0460 (310-369)||(1602-1661)
[»] scaffold0337 (1 HSPs)
scaffold0337 (195-234)||(7024-7063)
[»] scaffold0455 (1 HSPs)
scaffold0455 (187-233)||(10689-10735)
[»] scaffold0189 (2 HSPs)
scaffold0189 (195-233)||(11210-11248)
scaffold0189 (299-367)||(11188-11255)
[»] scaffold0154 (1 HSPs)
scaffold0154 (187-233)||(37483-37529)
[»] scaffold0006 (1 HSPs)
scaffold0006 (310-368)||(209325-209383)
[»] scaffold0558 (2 HSPs)
scaffold0558 (305-366)||(2448-2508)
scaffold0558 (305-366)||(5860-5920)
[»] scaffold0117 (1 HSPs)
scaffold0117 (194-235)||(17942-17982)
[»] scaffold0004 (1 HSPs)
scaffold0004 (195-236)||(96001-96042)


Alignment Details
Target: chr3 (Bit Score: 157; Significance: 4e-83; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 188 - 368
Target Start/End: Original strand, 9595867 - 9596047
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  9595867 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttatt 9595966  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  9595967 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttgccg 9596047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 187 - 367
Target Start/End: Original strand, 26662424 - 26662604
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |    
T  26662424 cgggagtggttatggtgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgt 26662523  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  26662524 tcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcacaataacttttgcc 26662604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 187 - 367
Target Start/End: Original strand, 46237644 - 46237824
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||||||||    
T  46237644 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcatactcccccaaagtgagccaaaaccatttttat 46237743  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  46237744 tcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 46237824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 187 - 367
Target Start/End: Complemental strand, 9106447 - 9106267
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||| |    
T  9106447 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacacccccaaagtgagccaaaaccatttttgt 9106348  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  9106347 tcaaaatgaaagaaatctgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 9106267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 188 - 368
Target Start/End: Complemental strand, 19284850 - 19284670
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||  |||| ||||||||||    
T  19284850 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacatccccaaagtgagtcaaaaccatttttatt 19284751  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  19284750 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 19284670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 188 - 367
Target Start/End: Original strand, 3475294 - 3475473
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||| ||    
T  3475294 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacatctccaaagtgagccaaaatcatttttgtt 3475393  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  3475394 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 3475473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 187 - 368
Target Start/End: Original strand, 30947797 - 30947978
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| |    
T  30947797 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccccaaaagtgagccaaaaccatttttgt 30947896  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  30947897 tcaaaatgaaagaaatttgatgattgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgccg 30947978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 185 - 368
Target Start/End: Complemental strand, 47335219 - 47335031
Alignment:
Q  185 agcgggagtggttatggtgcataaggaaatcctt-----atacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatca 279  Q
    ||||||||||||||||||||||||||||||||||     || ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  47335219 agcgggagtggttatggtgcataaggaaatcctttccttatgcaccgtgcataaatcccaacataattgtttcctacacccccaaagtgagccaaaatca 47335120  T
Q  280 tttttattcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  47335119 tttttattcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 47335031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 187 - 368
Target Start/End: Original strand, 2941812 - 2941993
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||| |    
T  2941812 cgggagtgattatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgctttctacacccccaaagtgagccaaaaccatttttgt 2941911  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||  |||||||||||||||||||||||    
T  2941912 tcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtacataaggaaataacttatgcaccataacttttgccg 2941993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 188 - 366
Target Start/End: Original strand, 33413899 - 33414078
Alignment:
Q  188 gggagtggttatggtgcataaggaaatcc-ttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| |||||||||    
T  33413899 gggagtggttatggtgcataaggaaatcccttatgcaccgtgcataaatcccaatataattgcttcctacaccctcaaagtgagccaaaaccatttttat 33413998  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgc 366  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  33413999 ttaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgc 33414078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 187 - 369
Target Start/End: Original strand, 6097570 - 6097752
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||| |||| ||||||| |    
T  6097570 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccttaaagtgagccaaaaccatttttgt 6097669  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccgg 369  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  6097670 tcaaaataaaagaaatctgatagttatgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccgg 6097752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 188 - 368
Target Start/End: Complemental strand, 54379341 - 54379162
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||  ||| ||||||| ||    
T  54379341 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctccaatgtgagc-caaaccatttttgtt 54379243  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  54379242 caaaataaaagaaatatgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 54379162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 188 - 363
Target Start/End: Complemental strand, 26960805 - 26960630
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||| ||    
T  26960805 gggagtggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaatataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 26960706  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    |||||| ||||||| |||||| |||| ||||||||||||||||||||| |||||||  ||||| ||||||||||||    
T  26960705 caaaataaaagaaacctgatgattgtaatgtgtttatgcacggtgcataaggaaataacttatacaccataacttt 26960630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 187 - 367
Target Start/End: Complemental strand, 10986532 - 10986352
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| || |||||||||  |||| ||||||| |    
T  10986532 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacatcctcaaagtgagtcaaaaccatttttgt 10986433  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    | ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||  ||||| || |||||||||||||    
T  10986432 ttaaaataaaagaaatctgatggttatgatgtgtttatgcacggtgcataaggaaataacttatacatcataacttttgcc 10986352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 50755234 - 50755163
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  50755234 gttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 50755163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 188 - 266
Target Start/End: Original strand, 19384376 - 19384454
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19384376 gggagcggttatggtgcataaggaaattcttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 19384454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 188 - 266
Target Start/End: Original strand, 51361518 - 51361596
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||| ||||    
T  51361518 gggagcggttatggtgcataaggaaatccttatgcaccgtgtataaatcctaacataattgcttcctacacccctaaag 51361596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 51846785 - 51846843
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  51846785 atggttgtgaagtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 51846843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 8719187 - 8719133
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaac 241  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8719187 cgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 8719133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 9071074 - 9071020
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaac 241  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9071074 cgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaac 9071020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 34562394 - 34562442
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34562394 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 34562442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 34563352 - 34563410
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    ||||||||||  |||||||||||||||||| || |||||||||||||||||||||||||    
T  34563352 atggttgtgaaatgtttatgcacggtgcataagaaaatggcttatgcaccataactttt 34563410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 41192355 - 41192413
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    |||||||||| ||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  41192355 atggttgtgaagtgtttatgtacggtgcataaggaaatgacttatgcaccataactttt 41192413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 299 - 368
Target Start/End: Complemental strand, 47728456 - 47728387
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    ||||||||||||||||| ||||||||||| ||||||| || ||||| ||||||||  |||||||||||||    
T  47728456 aaatctgatggttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataacttttgccg 47728387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 51681999 - 51682068
Alignment:
Q  298 gaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||| || ||||||||||| ||||||| |||||||| ||||||||  ||||||||||||    
T  51681999 gaaatctgatggttgcgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttgcc 51682068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 19385313 - 19385380
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||||| ||||||||||||||||||| ||| | |  ||||||||||||||||||||||    
T  19385313 aaatctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 19385380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 51362436 - 51362503
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||||| ||||||||||||||||||| ||| | |  ||||||||||||||||||||||    
T  51362436 aaatctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 51362503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 363
Target Start/End: Complemental strand, 53595036 - 53594972
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    ||||||||||||||||| ||||||||||| ||||||| || ||||||||||||||  ||||||||    
T  53595036 aaatctgatggttgtgaagtgtttatgcagggtgcataagaaaatggcttatgcataataacttt 53594972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 31853207 - 31853164
Alignment:
Q  216 cttatacaccgtgcataaatcccaacataattgcttcctacacc 259  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  31853207 cttatgcaccgtgcataaatcccaacataattgcttcctacacc 31853164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 16276664 - 16276713
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||||    
T  16276664 gggagcggttatggtgcataaagaaatccttatgcaccgtgcataaatcc 16276713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 41191404 - 41191452
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  41191404 gggagtggttatggtgcatagggaaattcttatgcaccgtgcataaatc 41191452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 7045300 - 7045366
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    ||||||||||||||| |||||||| |||||||||| | ||| |  |||||||||||||||||||||||    
T  7045300 atctgatggttgtgaagtgtttatacacggtgcat-aagaatttccttatgcaccataacttttgccg 7045366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 8036801 - 8036844
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  8036801 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 8036844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 19385373 - 19385334
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  19385373 gttatggtgcataaggaaatccttatgcaccgtgcataaa 19385334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 308 - 367
Target Start/End: Complemental strand, 23755344 - 23755285
Alignment:
Q  308 ggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||||||    
T  23755344 ggttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttttgcc 23755285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 36185948 - 36185905
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  36185948 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 36185905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 50416481 - 50416524
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  50416481 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 50416524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 50416607 - 50416564
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  50416607 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 50416564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 51362496 - 51362457
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  51362496 gttatggtgcataaggaaatccttatgcaccgtgcataaa 51362457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 17620734 - 17620771
Alignment:
Q  191 agtggttatggtgcataaggaaatccttatacaccgtg 228  Q
    |||||||||||||||||||||||||||||| |||||||    
T  17620734 agtggttatggtgcataaggaaatccttatgcaccgtg 17620771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 47924408 - 47924367
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  47924408 gttatggtgcataaggaaatccttatgcaccctgcataaatc 47924367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 8718108 - 8718148
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  8718108 gttatggtgcataaggaaatccttatgcaccgtacataaat 8718148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 9069995 - 9070035
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  9069995 gttatggtgcataaggaaatccttatgcaccgtacataaat 9070035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 27446255 - 27446215
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  27446255 gttatggtgcataaggaaatccttatgcaccttgcataaat 27446215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 50754071 - 50754008
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttg 365  Q
    ||||||||||||||| ||||||||||||||||||| ||| | |  |||||| |||||||||||||    
T  50754071 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgtaccataacttttg 50754008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 7044387 - 7044430
Alignment:
Q  223 accgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||||||||||| | |||||||||||||| |||||||||||||    
T  7044387 accgtgcataaattctaacataattgcttcttacacccccaaag 7044430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 8037032 - 8036989
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||| ||||||||||||| |||| |||||||||||    
T  8037032 ggttatggtgcatgaggaaatccttatgcaccctgcataaatcc 8036989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 12974013 - 12974056
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||    
T  12974013 ggttatggtgcataaggaaatccttatgcaccctgcctaaatcc 12974056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 12974233 - 12974191
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  12974233 ggttatggtgcataaggaaatccttatgcacc-tgcataaatcc 12974191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 16277472 - 16277433
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  16277472 gttatggtgcataaggaaatctttatgcaccgtgcataaa 16277433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 19012605 - 19012562
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||    
T  19012605 ggttatggtgcataaggaaattcttatgcaccctgcataaatcc 19012562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 367
Target Start/End: Complemental strand, 23699390 - 23699327
Alignment:
Q  304 tgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||||||| ||||||||||| |||| || || ||||| ||||||||  ||||||||||||    
T  23699390 tgatggttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgcataataacttttgcc 23699327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 367
Target Start/End: Complemental strand, 23717845 - 23717782
Alignment:
Q  304 tgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||||||| ||||||||||| |||| || || ||||| ||||||||  ||||||||||||    
T  23717845 tgatggttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgcataataacttttgcc 23717782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 367
Target Start/End: Complemental strand, 23736301 - 23736238
Alignment:
Q  304 tgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||||||| ||||||||||| |||| || || ||||| ||||||||  ||||||||||||    
T  23736301 tgatggttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgcataataacttttgcc 23736238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 365
Target Start/End: Complemental strand, 32233048 - 32232993
Alignment:
Q  310 ttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttg 365  Q
    |||||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||||    
T  32233048 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttg 32232993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 36185727 - 36185770
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| || | |||||||||||    
T  36185727 ggttatggtgcataaggaaatccttatgcatcctgcataaatcc 36185770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 49053469 - 49053426
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||||| |||| |||| |||||||||||    
T  49053469 ggttatggtgcataaggaaatctttatccaccctgcataaatcc 49053426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 50754013 - 50754052
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||| ||||||||||||||||| |||||||||||||    
T  50754013 gttatggtacataaggaaatccttatgcaccgtgcataaa 50754052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 52987650 - 52987689
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgagga 340  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  52987650 atctgatggttgtgaagtgtttatgcacggtgcataagga 52987689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 8718166 - 8718101
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||| || |||||| ||||||||| ||| | |  ||||||||||||||||||||||    
T  8718166 atctgatggttgtgaagtatttatgtacggtgcataagg-atttccttatgcaccataacttttgcc 8718101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 9070053 - 9069988
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||| || |||||| ||||||||| ||| | |  ||||||||||||||||||||||    
T  9070053 atctgatggttgtgaagtatttatgtacggtgcataagg-atttccttatgcaccataacttttgcc 9069988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 367
Target Start/End: Original strand, 28299952 - 28300018
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||| ||||||| ||||||||||| ||| ||| |||||||| ||||||||  |||| |||||||    
T  28299952 atctgatagttgtgaagtgtttatgcatggtacataaggaaatgacttatgcataataatttttgcc 28300018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 47225890 - 47225848
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||  ||| |||||||||||    
T  47225890 gttatggtgcataaggaaatccttatgtaccctgcataaatcc 47225848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 21175309 - 21175268
Alignment:
Q  196 ttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  21175309 ttatggtgcatgaggaaatccttatgcaccctgcataaatcc 21175268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 23756332 - 23756295
Alignment:
Q  202 tgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  23756332 tgcataaggaaatccttatgcaccgtggataaatccca 23756295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 40220833 - 40220788
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    ||||||||||||||||||||||||  | ||||| ||||||||||||    
T  40220833 gggagtggttatggtgcataaggattttcttatgcaccgtgcataa 40220788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 265
Target Start/End: Complemental strand, 47729163 - 47729134
Alignment:
Q  236 cccaacataattgcttcctacacccccaaa 265  Q
    ||||||||||||||||||||||||||||||    
T  47729163 cccaacataattgcttcctacacccccaaa 47729134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 52987702 - 52987669
Alignment:
Q  201 gtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||| |||||||||||||    
T  52987702 gtgcataaggaaatccttatgcaccgtgcataaa 52987669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 236 - 264
Target Start/End: Complemental strand, 23700084 - 23700056
Alignment:
Q  236 cccaacataattgcttcctacacccccaa 264  Q
    |||||||||||||||||||||||||||||    
T  23700084 cccaacataattgcttcctacacccccaa 23700056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 236 - 264
Target Start/End: Complemental strand, 23718539 - 23718511
Alignment:
Q  236 cccaacataattgcttcctacacccccaa 264  Q
    |||||||||||||||||||||||||||||    
T  23718539 cccaacataattgcttcctacacccccaa 23718511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 236 - 264
Target Start/End: Complemental strand, 23736995 - 23736967
Alignment:
Q  236 cccaacataattgcttcctacacccccaa 264  Q
    |||||||||||||||||||||||||||||    
T  23736995 cccaacataattgcttcctacacccccaa 23736967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 37319458 - 37319522
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    ||||||||||  ||||| ||||||||||| ||||||| || ||||| ||||||||  ||||||||    
T  37319458 aaatctgatgaatgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataacttt 37319522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 39195106 - 39195170
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    |||| |||||||| | | ||||| ||||| |||||||||||||||| ||||||||  ||||||||    
T  39195106 aaatttgatggttataaagtgttcatgcagggtgcatgaggaaatgacttatgcataataacttt 39195170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 2e-81; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 8 - 186
Target Start/End: Complemental strand, 31964116 - 31963942
Alignment:
Q  8 aacaagtcaaagactttataaggaatcaaacaaaagagcagatcaggattgaatgagaaagataaatttcataatgaagagcctacttataggacttacc 107  Q
    ||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31964116 aacaagtcaaagactttataaggaatcaaa----agagcagatcaggattgaatgagaaagataaatttcataatgaagagcctacttataggacttacc 31964021  T
Q  108 ttcctatgaaaagcctcgcgtatccctccaggaaataatagcacatgtgatttggaagataaaagcttgaataggttag 186  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31964020 ttcctatgaaaagcctcgcgtgtccctcaaggaaataatagcacatgtgatttggaagataaaagcttgaataggttag 31963942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 188 - 367
Target Start/End: Original strand, 30884109 - 30884288
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||| ||    
T  30884109 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 30884208  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  30884209 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 30884288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 188 - 367
Target Start/End: Complemental strand, 31660248 - 31660069
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | |||| ||||||||||    
T  31660248 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacacccccaaagtgaaccaaaaccatttttatt 31660149  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  31660148 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 31660069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 188 - 367
Target Start/End: Complemental strand, 46358699 - 46358520
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||    
T  46358699 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 46358600  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  46358599 caaaataaaaaaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 46358520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 182 - 367
Target Start/End: Complemental strand, 763882 - 763697
Alignment:
Q  182 gttagcgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatt 281  Q
    |||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  763882 gttaccgggagtggttatggtgcataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacacccccaaagcgagccaaaaccatt 763783  T
Q  282 tttattcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    | | |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  763782 tatgttcaaaataaaagaaatctgatggttgtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 763697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 190 - 367
Target Start/End: Original strand, 16933132 - 16933310
Alignment:
Q  190 gagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccc-caaagtgagcaaaaatcatttttattc 288  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||| |||| ||||||| |||    
T  16933132 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacaccccccaaagtgagccaaaaccatttttgttc 16933231  T
Q  289 aaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  16933232 aaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 16933310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 190 - 367
Target Start/End: Original strand, 16938515 - 16938693
Alignment:
Q  190 gagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccc-caaagtgagcaaaaatcatttttattc 288  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||| |||| ||||||| |||    
T  16938515 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatctcaacataattgcttcctacaccccccaaagtgagccaaaaccatttttgttc 16938614  T
Q  289 aaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  16938615 aaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 16938693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 188 - 368
Target Start/End: Complemental strand, 47340326 - 47340145
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||    
T  47340326 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 47340227  T
Q  288 caaaattaaagaaatctgatggttgtgatgtg-tttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||| || ||||  |||||||||||||||||||||||    
T  47340226 caaaataaaagaaatctgatggttgtgatgtgttttatgcacggtgcataagaaaataacttatgcaccataacttttgccg 47340145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 188 - 369
Target Start/End: Original strand, 41910999 - 41911177
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| | |||| ||||||| ||    
T  41910999 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccctcaaagtgaaccaaaaccatttttgtt 41911098  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccgg 369  Q
    ||||||   | ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  41911099 caaaat---aaaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccgg 41911177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 187 - 352
Target Start/End: Complemental strand, 35737128 - 35736963
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||| |    
T  35737128 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacatccccaaagtgagccaaaaccatttttgt 35737029  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgc 352  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||  |||||||    
T  35737028 tcaaaataaaagaaatatgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgc 35736963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 46572568 - 46572647
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  46572568 cgggagcggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaag 46572647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 188 - 266
Target Start/End: Original strand, 32685839 - 32685917
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  32685839 gggagcggttatggtgcataaggaaatccttatacaccgtgcataaatctcaacataattgcttcctacaccctcaaag 32685917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 278 - 367
Target Start/End: Original strand, 20000651 - 20000740
Alignment:
Q  278 catttttattcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||    
T  20000651 catttttgttcaaagtgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataagtaaatgacttatgcaccataacttttgcc 20000740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 48692093 - 48692021
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  48692093 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctccaaag 48692021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 15973856 - 15973933
Alignment:
Q  189 ggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    |||| ||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||| ||||    
T  15973856 ggagcggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacatagttgcttcctacacccctaaag 15973933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 76 - 186
Target Start/End: Complemental strand, 31975447 - 31975336
Alignment:
Q  76 tcataatgaagagcctacttataggactt-accttcctatgaaaagcctcgcgtatccctccaggaaataatagcacatgtgatttggaagataaaagct 174  Q
    ||||||| |||||| ||||||| ||| || ||||||||||||| ||||||||| |||||||||||| |||| || |||||||| ||||||||||||||||    
T  31975447 tcataataaagagcatacttattggaatttaccttcctatgaagagcctcgcgcatccctccaggatataacaggacatgtgacttggaagataaaagct 31975348  T
Q  175 tgaataggttag 186  Q
    | || |||||||    
T  31975347 taaagaggttag 31975336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 5757452 - 5757386
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||| ||||||||||||||||||| |||||||| ||||||||  ||||||||||||    
T  5757452 atctgatggttgtgaagtgtttatgcacggtgcataaggaaatgtcttatgcataataacttttgcc 5757386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 34228600 - 34228654
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaaca 242  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  34228600 gggagtggttatggtgcataagaaaatccttatgcaccgtgcataaatcccaaca 34228654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 299 - 364
Target Start/End: Original strand, 11732645 - 11732710
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    |||||| |||||||||| |||||||||||| |||||| || |||||||||||||||||||||||||    
T  11732645 aaatctaatggttgtgaagtgtttatgcacagtgcataagaaaatggcttatgcaccataactttt 11732710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 299 - 363
Target Start/End: Complemental strand, 34875557 - 34875493
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||  ||||||||    
T  34875557 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatggcttatgcataataacttt 34875493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 31949024 - 31948941
Alignment:
Q  103 ttaccttcctatgaaaagcctcgcgtatccctccaggaaataatagcacatgtgatttggaagataaaagcttgaataggttag 186  Q
    ||||||||||||||||  |||||||||  ||||||||| ||||||| |||||||| ||||||| |||||| ||||| |||||||    
T  31949024 ttaccttcctatgaaatccctcgcgtaatcctccaggatataataggacatgtgacttggaagctaaaagattgaagaggttag 31948941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 48830648 - 48830601
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48830648 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 48830601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 24359932 - 24359874
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    |||||||||| ||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  24359932 atggttgtgaagtgttgatgcacggtgcataaggaaatgacttatgcaccataactttt 24359874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 11732036 - 11732085
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  11732036 cgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatc 11732085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 299 - 368
Target Start/End: Original strand, 44141249 - 44141318
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    ||||| ||||||||||| ||||||||||| ||||||| |||||||| ||||||||  |||||||||||||    
T  44141249 aaatcagatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcatgataacttttgccg 44141318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 46025108 - 46025060
Alignment:
Q  189 ggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  46025108 ggagtggttatggtgcataaggaaatccctatgcaccgtgcataaatcc 46025060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 33798783 - 33798733
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  33798783 cgggagtggttatggtgcataaggaaatccttatgcaccgtacgtaaatcc 33798733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 299 - 368
Target Start/End: Original strand, 39007647 - 39007716
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||| |||||||||||| ||||||||||| ||||||| |||||||| ||||||||  ||||| |||||||    
T  39007647 aaatatgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacctttgccg 39007716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 15974934 - 15975001
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||| |||||||||||| ||||||||||||||||||| ||| | |  ||||||||||||||||||||||    
T  15974934 aaatatgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 15975001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 24360804 - 24360756
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||||    
T  24360804 gggagtggttatggtgcataaggaaatatttatgcaccgtgcataaatc 24360756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 15974994 - 15974955
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  15974994 gttatggtgcataaggaaatccttatgcaccgtgcataaa 15974955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 26945757 - 26945714
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  26945757 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 26945714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 30428880 - 30428919
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  30428880 gttatggtgcataaggaaatccttatgcaccgtgcataaa 30428919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 38837772 - 38837729
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  38837772 ggttatggtgcataaggaaatccttatgcaccttgcataaatcc 38837729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 44426599 - 44426642
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  44426599 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 44426642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 48306392 - 48306331
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacc 259  Q
    |||||||||||||||||   | ||||| |||||||||||||||||||||||||| |||||||||||    
T  48306392 ggttatggtgcataagg---ttcttatgcaccgtgcataaatcccaacataatt-cttcctacacc 48306331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 12286769 - 12286723
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  12286769 cgggagtggttatggtgcataaggaaatctttatgcacagtgcataa 12286723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 30428938 - 30428873
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||||||||||  |||||||||||||||||| ||| | |  ||||||||||||||||||||||    
T  30428938 atctgatggttgtgaaatgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 30428873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 46024092 - 46024027
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||| ||||||||||||||||||| ||| | |  ||| ||||||||||||||||||    
T  46024092 atctgatggttgtgaagtgtttatgcacggtgcataagg-attttcttgtgcaccataacttttgcc 46024027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 924498 - 924539
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  924498 ggttatggtgcataaggaaatctttatacaccttgcataaat 924539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 46004578 - 46004537
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  46004578 ggttatggtgcataaggaaatccttatgcaccctgcataaat 46004537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 25778904 - 25778837
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||||| ||| |||||||| |||||| | ||| |  ||||||||||||||||||||||    
T  25778904 aaatctgatggttgtgaagtgcttatgcacagtgcat-aagaattttcttatgcaccataacttttgcc 25778837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 44426855 - 44426799
Alignment:
Q  181 ggttagcgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||| ||| | |||||||||||||||||||||| |||| |||| |||||||||||    
T  44426855 ggttagggggcgcggttatggtgcataaggaaatctttatgcaccctgcataaatcc 44426799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 12279752 - 12279791
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  12279752 gttatggtgcataaggaaatctttatgcaccgtgcataaa 12279791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 31365272 - 31365315
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| || | |||||||||||    
T  31365272 ggttatggtgcataaggaaatccttatgcatcttgcataaatcc 31365315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 34227677 - 34227720
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| || | |||||||||||    
T  34227677 ggttatggtgcataaggaaatccttatgcaacctgcataaatcc 34227720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 43742250 - 43742293
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| || | |||||||||||    
T  43742250 ggttatggtgcataaggaaatccttatgcatcctgcataaatcc 43742293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 48690902 - 48690941
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  48690902 gttatggtgcataaagaaatccttatgcaccgtgcataaa 48690941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 6797394 - 6797451
Alignment:
Q  310 ttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| ||||||||||| | ||||| |||||||| ||||||||  ||||||||||||    
T  6797394 ttgtgaagtgtttatgcaggatgcataaggaaatgacttatgcataataacttttgcc 6797451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 7845140 - 7845099
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| || | |||||||||    
T  7845140 ggttatggtgcataaggaaatccttatgcaacctgcataaat 7845099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 34227919 - 34227878
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||| ||||| |||| |||||||||    
T  34227919 ggttatggtgcataaggaaattcttatgcaccctgcataaat 34227878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 41066012 - 41065971
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||||||||||||||  ||| |||||||||    
T  41066012 ggttatggtgcataaggaaatccttatgtaccctgcataaat 41065971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 28396736 - 28396768
Alignment:
Q  202 tgcataaggaaatccttatacaccgtgcataaa 234  Q
    ||||||||||||||||||| |||||||||||||    
T  28396736 tgcataaggaaatccttatgcaccgtgcataaa 28396768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 236 - 264
Target Start/End: Complemental strand, 46025041 - 46025013
Alignment:
Q  236 cccaacataattgcttcctacacccccaa 264  Q
    |||||||||||||||||||||||||||||    
T  46025041 cccaacataattgcttcctacacccccaa 46025013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 153; Significance: 9e-81; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 191 - 367
Target Start/End: Original strand, 49936827 - 49937003
Alignment:
Q  191 agtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttattcaa 290  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  49936827 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaatcatttttgttcaa 49936926  T
Q  291 aattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  49936927 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 49937003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 188 - 368
Target Start/End: Complemental strand, 24636105 - 24635925
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||    
T  24636105 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 24636006  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  24636005 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 24635925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 188 - 367
Target Start/End: Original strand, 20434609 - 20434788
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    |||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  20434609 gggagtggttatggtgcataaggaaatcattatgcaccatgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaatcatttttgtt 20434708  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20434709 caaaatgaaagaaatctaatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 20434788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 187 - 368
Target Start/End: Original strand, 48762217 - 48762398
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| |    
T  48762217 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccctaaagtgagccaaaaccatttttgt 48762316  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  48762317 tcaaaataaaagaaatctaatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 48762398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 187 - 367
Target Start/End: Original strand, 19897646 - 19897826
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||| |    
T  19897646 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcagaaatcccaacataattgcttcctacacctccaaagtgagccaaaatcatttttgt 19897745  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  19897746 tcaaaataaaagaaatctgatggttgtgatatgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 19897826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 188 - 367
Target Start/End: Original strand, 25888916 - 25889094
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||| ||    
T  25888916 gggagtggttatggtgcataaggaa-tccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 25889014  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  25889015 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttgcc 25889094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 188 - 367
Target Start/End: Complemental strand, 43452721 - 43452542
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||| ||    
T  43452721 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgtttcctacacccccaaagtgagccaaaaccatttttgtt 43452622  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  43452621 caaaataaaagaaatctgatagttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 43452542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 187 - 367
Target Start/End: Complemental strand, 16976135 - 16975954
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatca-ttttta 285  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| || |||||     
T  16976135 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaagtgagccaaaaccattttttg 16976036  T
Q  286 ttcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||  |||||| |||||||||||||||    
T  16976035 ttcaaaataaaagaaatctgatggttgtgatgtgtttatacacggtgcataaggaaataacttatgaaccataacttttgcc 16975954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 188 - 367
Target Start/End: Complemental strand, 6314295 - 6314115
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatca-tttttat 286  Q
    ||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||| ||||||||||||| |||| || ||||| |    
T  6314295 gggagtggttatggtgcataaggaaatccttatgcaccgtatataaatcccaacataattgcttcctacatccccaaagtgagccaaaaccattttttgt 6314196  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6314195 tcaaaatgaaagaaatttgatggctgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 6314115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 188 - 368
Target Start/End: Complemental strand, 18619013 - 18618834
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||| ||    
T  18619013 gggagtagttatggtgcataaggaa-tccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaacaatttttgtt 18618915  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||||||||||||||||||    
T  18618914 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataatttatgcaccataacttttgccg 18618834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 214 - 368
Target Start/End: Complemental strand, 50351956 - 50351802
Alignment:
Q  214 tccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttattcaaaattaaagaaatctgatggttgt 313  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||| |||||||| | |||||||||||||||||    
T  50351956 tccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccataaccatttttgttcaaaatgatagaaatctgatggttgt 50351857  T
Q  314 gatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  50351856 gatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgccg 50351802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 188 - 265
Target Start/End: Complemental strand, 23817489 - 23817412
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaa 265  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23817489 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 23817412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 188 - 266
Target Start/End: Complemental strand, 11422619 - 11422541
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||    
T  11422619 gggagcggttatggtgcataaggaaatccttatgcatcgtgcataaattccaacataattgcttcctacacccccaaag 11422541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 188 - 265
Target Start/End: Original strand, 23920966 - 23921043
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaa 265  Q
    ||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||    
T  23920966 gggagcggttatggtgcataaggaaatccttatgcatcgtgcataaatcccaacataattgtttcctacacccccaaa 23921043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 23174403 - 23174475
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23174403 ggttatggtgcataagaaaattcttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 23174475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 288 - 367
Target Start/End: Original strand, 4097895 - 4097974
Alignment:
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| |||||||| |||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  4097895 caaaatgaaagaaatttgatggttgtgaagtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttgcc 4097974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 21641588 - 21641667
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    |||||| ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  21641588 cgggagcggttatgctgcataaggaaatccttatgcaccgtgcacaaatcccaacataattgcttcctacaccaccaaag 21641667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 288 - 367
Target Start/End: Complemental strand, 34369739 - 34369660
Alignment:
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||| |||||||    
T  34369739 caaaatgaaagaaatctgatggttgtgaagtgtttatgcacggtgcataagaaaatggcttatgcaccataatttttgcc 34369660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 188 - 266
Target Start/End: Original strand, 4097105 - 4097182
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||| ||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  4097105 gggagcggttatggtgcataaggaa-tccttatgcaccgtgcttaaatcccaacataattgcttcctacacccccaaag 4097182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 290 - 368
Target Start/End: Complemental strand, 11421671 - 11421593
Alignment:
Q  290 aaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  11421671 aaatgaaagaaatctgatggttgtgaagtgtttatgcacggtgcataaggaaatgatttatgcaccataacttttgccg 11421593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 23175509 - 23175585
Alignment:
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    |||||| |||||||| |||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||    
T  23175509 caaaatgaaagaaatttgatggttgtgaagtgtttatgcacggcgcataaggaaatggcttatgcaccataactttt 23175585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 28375552 - 28375464
Alignment:
Q  279 atttttattcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| || ||||| ||| ||||||||||||||||||||||||||||||||||||| | |||||  ||||||||||||||||||||||    
T  28375552 atttttgtttaaaataaaaaaaatctgatggttgtgatgtgtttatgcacggtgcataaagaaataacttatgcaccataacttttgcc 28375464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 183 - 265
Target Start/End: Complemental strand, 180907 - 180825
Alignment:
Q  183 ttagcgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaa 265  Q
    |||| ||||| |||||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||    
T  180907 ttagggggagcggttatggtgtataaagaaatccttatgcaccgtgtataaatcccaacataattgcttcctacactcccaaa 180825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 21255835 - 21255886
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21255835 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatccca 21255886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 21256777 - 21256835
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||    
T  21256777 atggttgtgaagtgtttatgcacggtgcataagaaaatggcttatgcaccataactttt 21256835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 31529663 - 31529727
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||  ||||||||    
T  31529663 aaatctgatggttgtgaagtgtttatgcatggtgcataaggaaatggcttatgcataataacttt 31529727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 37639407 - 37639341
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||||||    
T  37639407 atctgatggttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttttgcc 37639341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 31084452 - 31084404
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  31084452 cgggagtggttatggtgcataaggaaatccttatgtaccgtgcataaat 31084404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 363
Target Start/End: Complemental strand, 33097473 - 33097409
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||    
T  33097473 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 33097409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 18056849 - 18056783
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    ||||||||||||||| ||||||||||||||||||| ||| | |  |||||||||||||||||||||||    
T  18056849 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgccg 18056783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 18057858 - 18057807
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||||||||||    
T  18057858 gggagcggttatggtgtataaggaaatccttatgcaccgtgcataaatccca 18057807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 17893066 - 17893116
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||||||    
T  17893066 cgggcgtggttatggtgcataaggaaatccttatgcaccctgcataaatcc 17893116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 31083423 - 31083365
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    |||||||||| ||||||||| | ||| ||| ||||||||||||||||||||||||||||    
T  31083423 atggttgtgaagtgtttatgaatggtacataaggaaatggcttatgcaccataactttt 31083365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 367
Target Start/End: Original strand, 35198181 - 35198247
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||| ||||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||||||    
T  35198181 atctgatggctgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttttgcc 35198247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 31763776 - 31763817
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  31763776 ggttatggtgcataaggaaatccttatacaccctgcataaat 31763817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 34370537 - 34370488
Alignment:
Q  217 ttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    |||| |||||||||||||||| ||||||||||||||||||||| ||||||    
T  34370537 ttatgcaccgtgcataaatcctaacataattgcttcctacacctccaaag 34370488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 302 - 363
Target Start/End: Original strand, 51801734 - 51801795
Alignment:
Q  302 tctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    |||||||||||||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||    
T  51801734 tctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 51801795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 8401423 - 8401475
Alignment:
Q  214 tccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    |||||||  |||||||||||||||||||||||||| |||||||||| ||||||    
T  8401423 tccttatgtaccgtgcataaatcccaacataattgtttcctacacctccaaag 8401475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 363
Target Start/End: Complemental strand, 44260586 - 44260522
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||| |||| |||  ||||||||    
T  44260586 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttacgcataataacttt 44260522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 44688608 - 44688672
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    ||||||||||||||||| |||||||||||  |||||| |||||||| ||||||||  ||||||||    
T  44688608 aaatctgatggttgtgaagtgtttatgcagcgtgcataaggaaatgacttatgcatgataacttt 44688672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 9628642 - 9628599
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  9628642 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 9628599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 18056791 - 18056830
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  18056791 gttatggtgcataaggaaatccttatgcaccgtgcataaa 18056830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 33156993 - 33157036
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  33156993 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 33157036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 37228364 - 37228403
Alignment:
Q  321 ttatgcacggtgcatgaggaaatggcttatgcaccataac 360  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  37228364 ttatgcacggtgcataaggaaatggcttatgcaccataac 37228403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 42134176 - 42134133
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  42134176 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 42134133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 20507286 - 20507344
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    ||||||||||  | |||||||||  ||||| ||||||||||||||||||||||||||||    
T  20507286 atggttgtgaaatatttatgcacaatgcataaggaaatggcttatgcaccataactttt 20507344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 32595334 - 32595284
Alignment:
Q  186 gcgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||| ||||||||||||||||||||||||||||| |||| ||| ||||||    
T  32595334 gcgggcgtggttatggtgcataaggaaatccttatgcaccctgcttaaatc 32595284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 1395394 - 1395353
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  1395394 ggttatggtgcataaggaaatccttatgcaccatgcataaat 1395353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 10974634 - 10974675
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  10974634 ggttatggtgcataaggaaatccttatgcaccctgcataaat 10974675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 12796414 - 12796467
Alignment:
Q  184 tagcgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||| | ||||||||||||||||||||||||| | |||| |||||||||||    
T  12796414 tagcgggtgcggttatggtgcataaggaaatccttctgcaccttgcataaatcc 12796467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 14229173 - 14229214
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  14229173 ggttatggtgcataaggaaatccttatgcaccctgcataaat 14229214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 17893316 - 17893275
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  17893316 ggttatggtgcataaggaaatccttatgcaccctgcataaat 17893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 45849111 - 45849152
Alignment:
Q  196 ttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  45849111 ttatggtgcataaggaaatccttatgcaccctgcataaatcc 45849152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 304 - 368
Target Start/End: Complemental strand, 22348101 - 22348038
Alignment:
Q  304 tgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||||||||| |||||||||| |||||||| ||| | |  |||||||||||||||||||||||    
T  22348101 tgatggttgtgaagtgtttatgcgcggtgcataagg-atttccttatgcaccataacttttgccg 22348038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 9041094 - 9041055
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  9041094 ggttatggtgcataaggaaatccttatgcaccctgcataa 9041055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 14229404 - 14229361
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||||| |||| |||| |||||||||||    
T  14229404 ggttatggtgcataaggaaatctttatgcaccctgcataaatcc 14229361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 18928783 - 18928822
Alignment:
Q  198 atggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  18928783 atggtgcataaggaaatccttatgcaccctgcataaatcc 18928822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 18928998 - 18928955
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||||| |||| |||| |||||||||||    
T  18928998 ggttatggtgcataaggaaatctttatgcaccctgcataaatcc 18928955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 22348046 - 22348085
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  22348046 gttatggtgcataaggaaatccttatgcaccgcgcataaa 22348085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 23319011 - 23319058
Alignment:
Q  189 ggagtggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    |||| |||||||||| |||||||||||||||| ||| |||||||||||    
T  23319011 ggagcggttatggtggataaggaaatccttatgcactgtgcataaatc 23319058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 31764016 - 31763973
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| | |||||||||    
T  31764016 ggttatggtgcataaggaaatccttatgcaccctacataaatcc 31763973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 32595105 - 32595148
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||    
T  32595105 ggttatggtgcataaggaaattcttatgcaccctgcataaatcc 32595148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 41033946 - 41033985
Alignment:
Q  321 ttatgcacggtgcatgaggaaatggcttatgcaccataac 360  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  41033946 ttatgcacggtgcataaggaaatgacttatgcaccataac 41033985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 45890642 - 45890595
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||| |||||||||| ||||| |||||||||| ||||||||||||||    
T  45890642 gggagcggttatggtgtataagaaaatccttatgcaccgtgcataaat 45890595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 32143812 - 32143770
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||||||||||||||||||||||||| |||  ||||||||||    
T  32143812 ggttatggtgcataaggaaatccttatgcactctgcataaatc 32143770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 306 - 368
Target Start/End: Complemental strand, 41033322 - 41033261
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    ||||||||||| | |||||| | ||||||| |||||||  |||||||||||||||||||||||    
T  41033322 atggttgtgatttctttatgtatggtgcataaggaaatc-cttatgcaccataacttttgccg 41033261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 42133945 - 42133987
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||||||||||||||||||||||||| || | ||||||||||    
T  42133945 ggttatggtgcataaggaaatccttatgcatcctgcataaatc 42133987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 12070653 - 12070612
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||| ||||| |||| |||||||||    
T  12070653 ggttatggtgcataaggaaattcttatgcaccctgcataaat 12070612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 266
Target Start/End: Complemental strand, 16117027 - 16116998
Alignment:
Q  237 ccaacataattgcttcctacacccccaaag 266  Q
    ||||||||||||||||||||||||||||||    
T  16117027 ccaacataattgcttcctacacccccaaag 16116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 17811326 - 17811285
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| || ||||||    
T  17811326 ggttatggtgcataaggaaatccttatgcaccctgtataaat 17811285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 19861758 - 19861717
Alignment:
Q  192 gtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    ||||||||||||||||||||  ||||||| ||||||||||||    
T  19861758 gtggttatggtgcataaggatttccttatgcaccgtgcataa 19861717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 265
Target Start/End: Original strand, 23319078 - 23319107
Alignment:
Q  236 cccaacataattgcttcctacacccccaaa 265  Q
    ||||||||||||||||||||||||||||||    
T  23319078 cccaacataattgcttcctacacccccaaa 23319107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 29945459 - 29945418
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||  |||||||||    
T  29945459 ggttatggtgcataaggaaatccttatgcactctgcataaat 29945418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 45849350 - 45849309
Alignment:
Q  196 ttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||| ||||| |||| |||||||||||    
T  45849350 ttatggtgcataaggaaattcttatgcaccctgcataaatcc 45849309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 45889605 - 45889642
Alignment:
Q  197 tatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  45889605 tatggtgcataaggaaattcttatccaccgtgcataaa 45889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 365
Target Start/End: Complemental strand, 13590517 - 13590469
Alignment:
Q  317 gtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttg 365  Q
    ||||||||||| ||||||| |||||||| ||||||||  ||||||||||    
T  13590517 gtgtttatgcagggtgcataaggaaatgacttatgcataataacttttg 13590469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 14389852 - 14389888
Alignment:
Q  201 gtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||| |||| |||||||||||    
T  14389852 gtgcataaggaaatccttatgcaccctgcataaatcc 14389888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 16115865 - 16115897
Alignment:
Q  202 tgcataaggaaatccttatacaccgtgcataaa 234  Q
    ||||||||||||||||||| |||||||||||||    
T  16115865 tgcataaggaaatccttatgcaccgtgcataaa 16115897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 340
Target Start/End: Complemental strand, 16115913 - 16115877
Alignment:
Q  304 tgatggttgtgatgtgtttatgcacggtgcatgagga 340  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  16115913 tgatggttgtgaagtgtttatgcacggtgcataagga 16115877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 342 - 370
Target Start/End: Complemental strand, 19841511 - 19841483
Alignment:
Q  342 atggcttatgcaccataacttttgccgga 370  Q
    |||||||||||||||||||||||||||||    
T  19841511 atggcttatgcaccataacttttgccgga 19841483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 188 - 216
Target Start/End: Original strand, 23276984 - 23277012
Alignment:
Q  188 gggagtggttatggtgcataaggaaatcc 216  Q
    |||||||||||||||||||||||||||||    
T  23276984 gggagtggttatggtgcataaggaaatcc 23277012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 28323330 - 28323398
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||||  ||||||||| | ||||||| |  ||||| ||||||||  ||||||||||||    
T  28323330 aaatctgatggttgtgtagtgtttatggagggtgcataaaaaaatgacttatgcataataacttttgcc 28323398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 4e-80; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 188 - 367
Target Start/End: Original strand, 26637724 - 26637903
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||    
T  26637724 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccctaaagtgagccaaaaccatttttgtt 26637823  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  26637824 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcataagaaaatggcttatgcaccataacttttgcc 26637903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 183 - 367
Target Start/End: Complemental strand, 14394652 - 14394468
Alignment:
Q  183 ttagcgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcattt 282  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  14394652 ttagggggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccattt 14394553  T
Q  283 ttattcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||  ||||||||||||||||||||||    
T  14394552 ttattcaaaataaaagaaatctgatggttgtgatgtatttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 14394468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 188 - 363
Target Start/End: Original strand, 14940243 - 14940418
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||    
T  14940243 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 14940342  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  14940343 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 14940418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 188 - 368
Target Start/End: Complemental strand, 37456859 - 37456679
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||| ||    
T  37456859 gggagtggttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaactatttttgtt 37456760  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  37456759 caaaatgaaagaaatctgatggttgtgatgtgtttatgtacggtgcataaggaaatggctcatgcaccataacttttgccg 37456679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 188 - 368
Target Start/End: Complemental strand, 15416843 - 15416663
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||| |||| ||||||| ||    
T  15416843 gggagtggttatgatgcataaggaaatccttatgcaccgtgcataaatcccaacatgattgcttcctacactcccaaagtgagccaaaaccatttttgtt 15416744  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  15416743 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 15416663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 188 - 367
Target Start/End: Original strand, 3883922 - 3884101
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||| |||| ||||||| ||    
T  3883922 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacacctccaaagtgagccaaaaccatttttgtt 3884021  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| |||||||| |||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  3884022 caaaatgaaagaaatttgatggttgtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 3884101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 188 - 367
Target Start/End: Complemental strand, 13553162 - 13552983
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||||||  |||||||||| |||||||||||| ||    
T  13553162 gggagtggttatggtgcataaggaaatccttatgcaccgtgtataaatcctaatataattgcttcctacaccttcaaagtgagccaaaatcatttttgtt 13553063  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  13553062 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 13552983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 188 - 284
Target Start/End: Complemental strand, 30783636 - 30783541
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcattttt 284  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||    
T  30783636 gggagtggttatgatgcataaggaaatccttatgcaccgtgcataaat-ccaacataattgcttcctacacccccaaagtgagccaaaaccattttt 30783541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 30783516 - 30783435
Alignment:
Q  286 ttcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  30783516 ttcaaaatgaaagaaatctgatggttgcgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 30783435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 188 - 266
Target Start/End: Original strand, 28069242 - 28069320
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||| |||||||||| |||||||||||||||| ||||| |||||||| |||||||||||||||||||||| |||||||    
T  28069242 gggagcggttatggtgtataaggaaatccttatgcaccgagcataaattccaacataattgcttcctacacacccaaag 28069320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 16552637 - 16552705
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||| |||||||||||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||||||    
T  16552637 aaatatgatggttgtgaagtgtttatgcatggtgcataaggaaatgacttatgcataataacttttgcc 16552705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 16668794 - 16668858
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttg 365  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||||    
T  16668794 atctgatggttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttttg 16668858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 33868223 - 33868155
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||| ||||||||||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||||||    
T  33868223 aaatcagatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttgcc 33868155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 13363842 - 13363792
Alignment:
Q  189 ggagtggttatggtgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    |||| |||||||||||| |||||||||||||| ||||||||||||||||||    
T  13363842 ggagcggttatggtgcacaaggaaatccttatgcaccgtgcataaatccca 13363792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 23948634 - 23948588
Alignment:
Q  184 tagcgggagtggttatggtgcataaggaaatccttatacaccgtgca 230  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||    
T  23948634 tagcgggagtggttatggtgcataagaaaatccttatgcaccgtgca 23948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 34330211 - 34330157
Alignment:
Q  212 aatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||||||| |||||||||||||| |||||||||||||||| |||| ||||||||    
T  34330211 aatccttatgcaccgtgcataaattccaacataattgcttcatacatccccaaag 34330157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 13362835 - 13362772
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttg 365  Q
    ||||||||||||||| ||||||||||||||||||| ||| | |  ||||||||||||||||||||    
T  13362835 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttg 13362772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 23155519 - 23155567
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||||    
T  23155519 cgggtgtggttatggtgcataaggaaatccttatgcaccctgcataaat 23155567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 23334705 - 23334756
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  23334705 cgggaatggttatggtgcataaggaaat-cttatgcaccgtgcataaatccca 23334756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 25017217 - 25017280
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttg 365  Q
    ||||||||||||||| ||||||||||||||||||| ||| | |  ||||||||||||||||||||    
T  25017217 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttg 25017280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 11661025 - 11660982
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  11661025 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 11660982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 13362777 - 13362816
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  13362777 gttatggtgcataaggaaatccttatgcaccgtgcataaa 13362816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 20696370 - 20696327
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  20696370 ggttatggtgcataaggaaatccttattcaccctgcataaatcc 20696327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 22695583 - 22695540
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  22695583 ggttatggtgcataaggaaatccttatgcaccttgcataaatcc 22695540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 25017275 - 25017236
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  25017275 gttatggtgcataaggaaatccttatgcaccgtgcataaa 25017236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 28070211 - 28070172
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  28070211 gttatggtgcataaggaaatccttatgcaccgtgcataaa 28070172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 39861823 - 39861780
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  39861823 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 39861780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 25189816 - 25189862
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||    
T  25189816 cgggagtggttatggtgcataaggatttccttatgcaccgtgcataa 25189862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 367
Target Start/End: Original strand, 28070153 - 28070218
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||| ||||||| ||||||||||||||||||| ||| | |  ||||||||||||||||||||||    
T  28070153 atctgatagttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 28070218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 34329192 - 34329127
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||| ||||||||||||||||||| | | | |  ||||||||||||||||||||||    
T  34329192 atctgatggttgtgaagtgtttatgcacggtgcataaag-atttccttatgcaccataacttttgcc 34329127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 3340591 - 3340632
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  3340591 ggttatggtgcataaggaaatccttatgcaccctgcataaat 3340632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 15559050 - 15559091
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  15559050 ggttatggtgcataaggaaatccttatgcaccatgcataaat 15559091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 16667667 - 16667704
Alignment:
Q  202 tgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  16667667 tgcataaggaaatccttatgcaccgtgcataaatccca 16667704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 302 - 362
Target Start/End: Complemental strand, 4675025 - 4674965
Alignment:
Q  302 tctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactt 362  Q
    |||||||||||||| ||||||||||| ||||||| |||||||| |||| |||  |||||||    
T  4675025 tctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttacgcataataactt 4674965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 365
Target Start/End: Original strand, 18465556 - 18465620
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttg 365  Q
    ||||||||||||||| ||||||||||| | ||||| | |||||| ||||||||  ||||||||||    
T  18465556 atctgatggttgtgaagtgtttatgcaggatgcataatgaaatgtcttatgcataataacttttg 18465620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 20134200 - 20134243
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| || | |||||||||||    
T  20134200 ggttatggtgcataaggaaatccttatgcagcctgcataaatcc 20134243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 20134442 - 20134399
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||  |||||||||||    
T  20134442 ggttatggtgcataaggaaatccttatgcactctgcataaatcc 20134399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 22672040 - 22671997
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| || | |||||||||||    
T  22672040 ggttatggtgcataaggaaatccttatgcatcctgcataaatcc 22671997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 23335765 - 23335726
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  23335765 gttatggtgcataaggaaatccgtatgcaccgtgcataaa 23335726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 25671333 - 25671290
Alignment:
Q  192 gtggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||||||||||||||||  ||| |||||||||    
T  25671333 gtggttatggtgcataaggaaatccttatgtaccatgcataaat 25671290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 34329134 - 34329173
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  34329134 gttatggtgcataaggaaatctttatgcaccgtgcataaa 34329173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 35662068 - 35662111
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| | |||||||||    
T  35662068 ggttatggtgcataaggaaatccttatgcaccctacataaatcc 35662111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 35662276 - 35662233
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||    
T  35662276 ggttatggtgcataaggaaatacttatgcaccctgcataaatcc 35662233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 39861580 - 39861623
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||| |||||||||||||||||| |||| |||||||||||    
T  39861580 ggttatggggcataaggaaatccttatgcaccctgcataaatcc 39861623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 236 - 266
Target Start/End: Original strand, 16667721 - 16667751
Alignment:
Q  236 cccaacataattgcttcctacacccccaaag 266  Q
    |||||||||||||||||||||||||||||||    
T  16667721 cccaacataattgcttcctacacccccaaag 16667751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 22830830 - 22830788
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||||||||| |||  |||||||||||    
T  22830830 gttatggtgcataaggaaatccttatgcacactgcataaatcc 22830788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 23155885 - 23155843
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||| ||||||||||| |||| |||||||||||    
T  23155885 gttatggtgcataatgaaatccttatgcaccttgcataaatcc 23155843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 266
Target Start/End: Original strand, 2826098 - 2826127
Alignment:
Q  237 ccaacataattgcttcctacacccccaaag 266  Q
    ||||||||||||||||||||||||||||||    
T  2826098 ccaacataattgcttcctacacccccaaag 2826127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 5630312 - 5630271
Alignment:
Q  196 ttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  5630312 ttatggtgcatgaggaaatccttatgcaccctgcataaatcc 5630271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 11660794 - 11660835
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| | |||||||    
T  11660794 ggttatggtgcataaggaaatccttatgcaccctacataaat 11660835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 16552248 - 16552289
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||| ||| |||| |||||||||    
T  16552248 ggttatggtgcataaggaaatccgtatgcaccctgcataaat 16552289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 39086518 - 39086559
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||| |||||||||| |||| |||||||||    
T  39086518 ggttatggtgcataagaaaatccttatgcaccctgcataaat 39086559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 39166150 - 39166195
Alignment:
Q  192 gtggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||| ||||||||||||||| ||||| |||| |||||||||||    
T  39166150 gtggttacggtgcataaggaaattcttatgcaccctgcataaatcc 39166195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 39166383 - 39166342
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||| |||||||||| |||| |||||||||    
T  39166383 ggttatggtgcataagaaaatccttatgcaccctgcataaat 39166342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 703732 - 703772
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||||||||||||| || | |||||||||    
T  703732 gttatggtgcataaggaaatccttatgcatcctgcataaat 703772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 15059677 - 15059633
Alignment:
Q  194 ggttatggtgcataaggaaat-ccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||    
T  15059677 ggttatggtgcataaggaaatcccttatgcaccctgcataaatcc 15059633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 4e-80; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 188 - 367
Target Start/End: Original strand, 7487141 - 7487320
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  7487141 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacctccaaagtgagccaaaaccatttttatt 7487240  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  7487241 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttgcc 7487320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 188 - 368
Target Start/End: Complemental strand, 8150010 - 8149830
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  8150010 gggagtggtaatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaatcatttttgtt 8149911  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  8149910 caaaataaaagaaatctgatggttgtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataacttttgccg 8149830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 188 - 368
Target Start/End: Complemental strand, 8154634 - 8154454
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  8154634 gggagtggtaatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaatcatttttgtt 8154535  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  8154534 caaaataaaagaaatctgatggttgtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataacttttgccg 8154454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 187 - 368
Target Start/End: Original strand, 15016452 - 15016633
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||| |    
T  15016452 cgggagtggttatggtgcataaggaaattcttatgcaccgtgcataaatctcaacataattgcttcctacacccccaaagtgagccaaaaccatttttgt 15016551  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  15016552 tcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 15016633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 188 - 368
Target Start/End: Complemental strand, 39355214 - 39355034
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||| ||    
T  39355214 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagcgagccaaaactatttttgtt 39355115  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  39355114 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 39355034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 187 - 367
Target Start/End: Original strand, 1292065 - 1292245
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||| |    
T  1292065 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttcctacacccccaaaatgagcaaaaaccatttttgt 1292164  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||| || ||||  ||||||||||||||||||||||    
T  1292165 tcaaaataaaagaaatctgatggttgtgatgtgtttatgtacggtgcataagaaaataacttatgcaccataacttttgcc 1292245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 190 - 365
Target Start/End: Complemental strand, 34464888 - 34464713
Alignment:
Q  190 gagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttattca 289  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||| |||| ||||||| ||||    
T  34464888 gagtggttatggtccataaggaaatccttatgcaccgtgcataaatccaaacataattgcttcctacacccctaaagtgagccaaaaccatttttgttca 34464789  T
Q  290 aaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttg 365  Q
    |||| |||||||||||||||||||||| |||||||||||||||||| |||||||  ||||||||||||||||||||    
T  34464788 aaataaaagaaatctgatggttgtgatatgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 34464713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 226 - 367
Target Start/End: Complemental strand, 9143726 - 9143585
Alignment:
Q  226 gtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttattcaaaattaaagaaatctgatggttgtgatgtgtttatg 325  Q
    |||||||||| ||||||||||||||||||||||||||||||||||  |||| ||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  9143726 gtgcataaattccaacataattgcttcctacacccccaaagtgagtcaaaaccatttttgttcaaaataaaagaaatctgatgattgtgatgtgtttatg 9143627  T
Q  326 cacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  9143626 cacggtgcataaggaaataacttatgcaccataacttttgcc 9143585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 546 - 645
Target Start/End: Complemental strand, 543171 - 543072
Alignment:
Q  546 cctcgtcttcactgaatcttccagcagagcaaattcggtcaaagagctctccaccagcagcatactccataactataccaagatgtgtaggagtcaaaac 645  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  543171 cctcgtcttcactgaatcttccagcagagcaaattcggtcaaagagctctccaccagcagcatactccataactataccaagatgtgtaggagtcaaaac 543072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 18297162 - 18297241
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    |||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18297162 cgggagcggttatggtgcatagggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 18297241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 25194034 - 25193962
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||    
T  25194034 ggttatggtgcataatgaaatccttatgcaccgtgcataaatcccaatataattgtttcctacacccccaaag 25193962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 288 - 374
Target Start/End: Complemental strand, 2263652 - 2263566
Alignment:
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccggaaaat 374  Q
    |||||| ||| ||||  ||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||    
T  2263652 caaaatgaaataaatgcgatggttgtgaagtgtttatgcacggtgcataaagaaatggcttatgcaccataacttttgccgtaaaat 2263566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 306 - 367
Target Start/End: Complemental strand, 18762928 - 18762867
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  18762928 atggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 18762867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 368 - 420
Target Start/End: Complemental strand, 543370 - 543318
Alignment:
Q  368 ggaaaatggggggttgagtcgctcatctagtttgagctaagggttaaatgatc 420  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  543370 ggaaaatggggggttgagtcgctcatctggtttgagctaagggttaaatgatc 543318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 41345082 - 41345129
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41345082 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 41345129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 18762988 - 18762927
Alignment:
Q  216 cttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaat 277  Q
    ||||| |||||| ||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  18762988 cttatgcaccgtacataaatcccaacataattgcttcctacacttccaaagtgagccaaaat 18762927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 18298111 - 18298177
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    ||||||||||||||| ||||||||||||||||||| ||| | |  |||||||||||||||||||||||    
T  18298111 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgccg 18298177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 299 - 365
Target Start/End: Complemental strand, 5098784 - 5098718
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttg 365  Q
    |||| |||||||||||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||||    
T  5098784 aaatttgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttg 5098718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 41346045 - 41346103
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    |||||||||| ||||||||  ||||||||| || |||||||||||||||||||||||||    
T  41346045 atggttgtgaagtgtttatatacggtgcataagaaaatggcttatgcaccataactttt 41346103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 25995354 - 25995286
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||||| || ||||||||  |||||| |||||||| ||||||||  ||||||||||||    
T  25995354 aaatctgatggttgtgaagtatttatgcagagtgcataaggaaatgtcttatgcataataacttttgcc 25995286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 4578590 - 4578625
Alignment:
Q  224 ccgtgcataaatcccaacataattgcttcctacacc 259  Q
    ||||||||||||||||||||||||||||||||||||    
T  4578590 ccgtgcataaatcccaacataattgcttcctacacc 4578625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 18298169 - 18298130
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  18298169 gttatggtgcataaggaaatccttatgcaccgtgcataaa 18298130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 20709781 - 20709820
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  20709781 gttatggtgcataaggaaatccttatccaccgtgcataaa 20709820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 21155480 - 21155441
Alignment:
Q  321 ttatgcacggtgcatgaggaaatggcttatgcaccataac 360  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  21155480 ttatgcacggtgcataaggaaatggcttatgcaccataac 21155441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 25192957 - 25192891
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||| |||||||||| ||||||||||||||||||| ||| | |  |||||||||||||||||||||||    
T  25192957 atctaatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgccg 25192891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 25192899 - 25192938
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  25192899 gttatggtgcataaggaaatccttatgcaccgtgcataaa 25192938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 27974291 - 27974330
Alignment:
Q  321 ttatgcacggtgcatgaggaaatggcttatgcaccataac 360  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  27974291 ttatgcacggtgcataaggaaatggcttatgcaccataac 27974330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 28060820 - 28060859
Alignment:
Q  321 ttatgcacggtgcatgaggaaatggcttatgcaccataac 360  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  28060820 ttatgcacggtgcataaggaaatggcttatgcaccataac 28060859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 31783794 - 31783837
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  31783794 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 31783837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 34726605 - 34726648
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  34726605 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 34726648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 20661397 - 20661439
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  20661397 ggttatggtgcataaggaaatccttatgcaccctgcataaatc 20661439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 20709839 - 20709774
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||| |||||||||||||||| || ||| | |  ||||||||||||||||||||||    
T  20709839 atctgatggttgtgaagtgtttatgcacggtggataagg-atttccttatgcaccataacttttgcc 20709774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 2264662 - 2264625
Alignment:
Q  229 cataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  2264662 cataaattccaacataattgcttcctacacccccaaag 2264625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 24183640 - 24183599
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  24183640 ggttatggtgcataaggaaatccttatgcaccctgcataaat 24183599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 37867155 - 37867196
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  37867155 ggttatggtgcataaggaaatccttatccaccctgcataaat 37867196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 43823910 - 43823873
Alignment:
Q  202 tgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  43823910 tgcataaggaaatccttatgcaccgtgcataaatccca 43823873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 19246664 - 19246704
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  19246664 gttatggtgcataaggaaatccttatgcaccctgcataaat 19246704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 36636935 - 36637003
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||||| ||||||||| | ||| ||| || ||||| ||||||||  ||||||||||||    
T  36636935 aaatctgatggttgtgaagtgtttatgtagggtacataagaaaatgacttatgcataataacttttgcc 36637003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 351
Target Start/End: Complemental strand, 39548110 - 39548058
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatg 351  Q
    |||| |||||||||||| ||||||||||| ||||||| |||||||| ||||||    
T  39548110 aaatttgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatg 39548058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 261
Target Start/End: Original strand, 14550465 - 14550500
Alignment:
Q  226 gtgcataaatcccaacataattgcttcctacacccc 261  Q
    ||||||||||||||||| ||||||||||||||||||    
T  14550465 gtgcataaatcccaacaaaattgcttcctacacccc 14550500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 16111748 - 16111705
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||||| |||| |||| |||||||||||    
T  16111748 ggttatggtgcataaggaaatctttatgcaccctgcataaatcc 16111705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 20661638 - 20661595
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||||| |||| |||| |||||||||||    
T  20661638 ggttatggtgcataaggaaatcattatgcaccctgcataaatcc 20661595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 22596305 - 22596348
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||| |||||||||||||||| |||| |||||||||||    
T  22596305 ggttatggtgtataaggaaatccttatgcaccctgcataaatcc 22596348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 22596547 - 22596504
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||||||||||  ||| |||||||||||    
T  22596547 ggttatggtgcataaggaaatccttatgtaccctgcataaatcc 22596504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 31711511 - 31711554
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||||||||||  ||| |||||||||||    
T  31711511 ggttatggtgcataaggaaatccttatgtaccctgcataaatcc 31711554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 34726839 - 34726796
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||    
T  34726839 ggttatggtgcataaggaaattcttatgcaccctgcataaatcc 34726796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 362
Target Start/End: Original strand, 40853685 - 40853740
Alignment:
Q  307 tggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactt 362  Q
    ||||||||| ||||||||||| | ||||| |||||||||||||||||  |||||||    
T  40853685 tggttgtgaagtgtttatgcaggatgcataaggaaatggcttatgcataataactt 40853740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 42364736 - 42364693
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||| |||||||||||||| |||| |||||||||||    
T  42364736 ggttatggtgcaaaaggaaatccttatgcaccctgcataaatcc 42364693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 372
Target Start/End: Original strand, 44352679 - 44352749
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccggaaa 372  Q
    ||||||||||||||||    ||||||| ||||||| ||  | ||||||||||||||||||||||||||||||    
T  44352679 atctgatggttgtgattaacttatgcatggtgcataagtta-tggcttatgcaccataacttttgccggaaa 44352749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 44915534 - 44915491
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||    
T  44915534 ggttatggtgcataaggaaatgcttatgcaccctgcataaatcc 44915491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 367
Target Start/End: Original strand, 4281788 - 4281854
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||| |||||||| ||  || ||| |||||||| ||||||||  ||||||||||||    
T  4281788 atctgatggttgtgaagtgtttatacagagtacataaggaaatgtcttatgcataataacttttgcc 4281854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 16142073 - 16142127
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgca 353  Q
    |||||| |||||||||| |||||||||||  |||||| |||||||||||| ||||    
T  16142073 aaatctaatggttgtgaagtgtttatgcagcgtgcataaggaaatggcttgtgca 16142127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 12449055 - 12449096
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||  |||||||||    
T  12449055 ggttatggtgcataaggaaatccttatgcacactgcataaat 12449096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 12449286 - 12449245
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||||||||| |||| |||| |||||||||    
T  12449286 ggttatggtgcataaggaaatctttatgcaccttgcataaat 12449245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 14551319 - 14551382
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgc 366  Q
    ||||||||||||||| ||||||||||||| ||||| || || |  |||||||||||||||||||||    
T  14551319 atctgatggttgtgaagtgtttatgcacg-tgcataag-aatttccttatgcaccataacttttgc 14551382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 25575324 - 25575365
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| || | |||||||||    
T  25575324 ggttatggtgcataaggaaatccttatgcatcctgcataaat 25575365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 37867398 - 37867357
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||| ||||||||||||||||||||| |||| |||||||||    
T  37867398 ggttacggtgcataaggaaatccttatgcaccctgcataaat 37867357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 42364493 - 42364534
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||| |||||||||| |||| |||||||||    
T  42364493 ggttatggtgcataagaaaatccttatgcaccctgcataaat 42364534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 13081858 - 13081922
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    ||||| ||||||||||| ||||||||| | ||||||| | |||||| ||||||||  ||||||||    
T  13081858 aaatcagatggttgtgaagtgtttatgtagggtgcataatgaaatgacttatgcataataacttt 13081922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 15252847 - 15252883
Alignment:
Q  201 gtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||| |||| |||||||||||    
T  15252847 gtgcataaggaaatccttatgcaccctgcataaatcc 15252883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 36635754 - 36635798
Alignment:
Q  192 gtggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||||||  ||||||| ||||||||||| |||||||||||||||    
T  36635754 gtggttatcatgcataaagaaatccttatgcaccgtgcataaatc 36635798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 150; Significance: 6e-79; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 187 - 368
Target Start/End: Complemental strand, 33864 - 33683
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |    
T  33864 cgggattggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgt 33765  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33764 tcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgccg 33683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 149; Significance: 2e-78; HSPs: 96)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 187 - 367
Target Start/End: Complemental strand, 11786154 - 11785974
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| |    
T  11786154 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacaccccaaaagtgagccaaaaccatttttgt 11786055  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  11786054 tcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggtttatgcaccataacttttgcc 11785974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 187 - 367
Target Start/End: Complemental strand, 11798321 - 11798141
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| |    
T  11798321 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccctaaagtgagccaaaaccatttttgt 11798222  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  11798221 tcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggtttatgcaccataacttttgcc 11798141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 191 - 367
Target Start/End: Original strand, 13635615 - 13635791
Alignment:
Q  191 agtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttattcaa 290  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||    
T  13635615 agtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagtcaaaaccatttttattcaa 13635714  T
Q  291 aattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  13635715 aatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 13635791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 188 - 367
Target Start/End: Original strand, 15051023 - 15051202
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  15051023 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaagtgagccaaaatcatttttgtt 15051122  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  15051123 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 15051202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 187 - 368
Target Start/End: Original strand, 49425943 - 49426124
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |    
T  49425943 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgt 49426042  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  49426043 tcaaaataaaagaaatttgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 49426124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 192 - 367
Target Start/End: Complemental strand, 30597874 - 30597699
Alignment:
Q  192 gtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttattcaaa 291  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||    
T  30597874 gtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccagagtgagccaaaatcatttttgttcaaa 30597775  T
Q  292 attaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    || ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  30597774 ataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 30597699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 188 - 367
Target Start/End: Original strand, 27865624 - 27865803
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    |||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||    
T  27865624 gggagtggttatggtgtataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaattatttttgtt 27865723  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  27865724 caaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcatatggaaatggcttatgcactataacttttgcc 27865803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 188 - 367
Target Start/End: Original strand, 49492399 - 49492578
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||  |||| ||||||||||    
T  49492399 gggagtagttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacactcctaaagtgagtcaaaaccatttttatt 49492498  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  49492499 caaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 49492578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 202 - 367
Target Start/End: Original strand, 51921166 - 51921331
Alignment:
Q  202 tgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttattcaaaattaaagaaa 301  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||| |||||||    
T  51921166 tgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaa 51921265  T
Q  302 tctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  51921266 tctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 51921331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 188 - 367
Target Start/End: Complemental strand, 53441499 - 53441320
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||| ||    
T  53441499 gggagtggttatggtgcataaggaaatccttatgcaccgggcataaattccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 53441400  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||  ||||||||||||||||||||||    
T  53441399 caaaataaaagaaatttgatggttgtgatgtgtttatgcacgatgcataaggaaataacttatgcaccataacttttgcc 53441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 223 - 370
Target Start/End: Complemental strand, 1622020 - 1621872
Alignment:
Q  223 accgtgcataaatcccaacataattgcttcctacaccccc-aaagtgagcaaaaatcatttttattcaaaattaaagaaatctgatggttgtgatgtgtt 321  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||  |||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  1622020 accgtgcataaatcccaacataattgcttcctacaccccccaaagttagtcaaaaccatttttgttcaaaattaaagaaatctgatggttgtgatgtgtt 1621921  T
Q  322 tatgcacggtgcatgaggaaatggcttatgcaccataacttttgccgga 370  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1621920 tatgcacggtgcataaggaaatggcttatgcaccataacttttgccgga 1621872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 187 - 367
Target Start/End: Complemental strand, 46672618 - 46672439
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||| ||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||| ||||||||| ||||  |||||| |    
T  46672618 cgggagtggttatgttgcataaggaaattcttatgcatcgtgcataaatcccaacatgattgcttcctacacccc-aaagtgagccaaaactatttttgt 46672520  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  46672519 tcaaaataaaataaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 46672439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 204 - 367
Target Start/End: Original strand, 35291451 - 35291614
Alignment:
Q  204 cataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttattcaaaattaaagaaatc 303  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||  |||||| |||||||| ||| |||||    
T  35291451 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaattgagccaaaactatttttgttcaaaataaaataaatc 35291550  T
Q  304 tgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    | |||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  35291551 ttatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 35291614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 215 - 367
Target Start/End: Complemental strand, 36011995 - 36011843
Alignment:
Q  215 ccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttattcaaaattaaagaaatctgatggttgtg 314  Q
    |||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||  |||||| |||||||| ||||||||||||||||||||    
T  36011995 ccttatgcaccgtgtataaatctcaacataattgcttcctacacccctaaagtgagccaaaactatttttgttcaaaataaaagaaatctgatggttgtg 36011896  T
Q  315 atgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  36011895 atgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 36011843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 213 - 367
Target Start/End: Complemental strand, 55765635 - 55765481
Alignment:
Q  213 atccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttattcaaaattaaagaaatctgatggttg 312  Q
    |||||||| ||||||||||||||||||| ||||||||||| || ||||  ||||||||  |||||||||||| |||||||| ||||||||||||||||||    
T  55765635 atccttatgcaccgtgcataaatcccaatataattgcttcatatacccttaaagtgagtcaaaatcatttttgttcaaaatgaaagaaatctgatggttg 55765536  T
Q  313 tgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    | ||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  55765535 taatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 55765481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 45256947 - 45256866
Alignment:
Q  185 agcgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45256947 agcgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 45256866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 50644717 - 50644642
Alignment:
Q  190 gagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaa 265  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  50644717 gagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctatacccccaaa 50644642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 639035 - 638965
Alignment:
Q  196 ttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  639035 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 638965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 188 - 266
Target Start/End: Complemental strand, 10473697 - 10473619
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||    
T  10473697 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacctaattgcttcctacacccccaaag 10473619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 189 - 266
Target Start/End: Original strand, 26577257 - 26577334
Alignment:
Q  189 ggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||    
T  26577257 ggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatttcaacataattgcttcctacacccccaaag 26577334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 10472569 - 10472497
Alignment:
Q  295 aaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||||||||||||||||  |||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  10472569 aaagaaatctgatggttgtgaaatgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 10472497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 288 - 367
Target Start/End: Original strand, 26578176 - 26578255
Alignment:
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| ||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||||||||||| |||||||||    
T  26578176 caaaatgaaagaaatctgatggttgtgaagtgtttatgcacgatgcataaagaaatggcttatgcaccatgacttttgcc 26578255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 38245023 - 38244946
Alignment:
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttg 365  Q
    |||||| ||||||||||||||||||||| ||||||||| || |||||  |||||||||||||||||||||||||||||    
T  38245023 caaaataaaagaaatctgatggttgtgaagtgtttatgaactgtgcagaaggaaatggcttatgcaccataacttttg 38244946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 51836328 - 51836400
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    |||||||||||||||||||||  |||| || ||||||||||||||||||||||||||||||||||||| ||||    
T  51836328 ggttatggtgcataaggaaatttttatgcatcgtgcataaatcccaacataattgcttcctacacccctaaag 51836400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 30358887 - 30358835
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30358887 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 30358835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 25574126 - 25574196
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccgg 369  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||||||||    
T  25574126 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttgccgg 25574196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 364
Target Start/End: Original strand, 1729615 - 1729678
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    ||||||||||||||| |||||||||||||||| || | |||||| |||||||||||||||||||    
T  1729615 atctgatggttgtgaagtgtttatgcacggtgtataaagaaatgacttatgcaccataactttt 1729678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 22180201 - 22180252
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  22180201 gggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatccca 22180252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 20861637 - 20861583
Alignment:
Q  310 ttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    |||||| |||||||||||||| |||| ||||||||||||||||||||||||||||    
T  20861637 ttgtgaagtgtttatgcacggcgcataaggaaatggcttatgcaccataactttt 20861583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 30357868 - 30357810
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  30357868 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgaaccataactttt 30357810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 38010202 - 38010145
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    |||||||||| ||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  38010202 atggttgtgaagtgtttatgcatggtgcataaggaaatgacttatgcaccataacttt 38010145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 25715637 - 25715687
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||||||    
T  25715637 cgggcgtggttatggtgcataaggaaatccttatgcaccctgcataaatcc 25715687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 54895628 - 54895583
Alignment:
Q  192 gtggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||    
T  54895628 gtggttatggtgcataaggaaatccttatgcaccctgcataaatcc 54895583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 363
Target Start/End: Complemental strand, 16298989 - 16298925
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    ||||||||||||||||| ||| ||||||| ||||||| |||||||| ||||||||  ||||||||    
T  16298989 aaatctgatggttgtgaagtgattatgcagggtgcataaggaaatgacttatgcataataacttt 16298925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 365
Target Start/End: Complemental strand, 24686634 - 24686574
Alignment:
Q  305 gatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttg 365  Q
    ||||||||||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||||    
T  24686634 gatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttg 24686574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 38245929 - 38245889
Alignment:
Q  226 gtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  38245929 gtgcataaatcccaacataattgtttcctacacccccaaag 38245889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 50643810 - 50643743
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||| ||| ||||||||||||||||||| ||| | |  ||||||||||||||||||||||    
T  50643810 aaatctgatggttatgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 50643743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 805148 - 805109
Alignment:
Q  321 ttatgcacggtgcatgaggaaatggcttatgcaccataac 360  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  805148 ttatgcacggtgcataaggaaatggcttatgcaccataac 805109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 8165763 - 8165806
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  8165763 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 8165806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 17109961 - 17109918
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  17109961 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 17109918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 21995671 - 21995714
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  21995671 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 21995714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 22181303 - 22181264
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  22181303 gttatggtgcataaggaaatccttatgcaccgtgcataaa 22181264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 27764247 - 27764286
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  27764247 gttatggtgcataaggaaatccttatgcaccgtgcataaa 27764286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 30779344 - 30779387
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  30779344 ggttatggtgcataaggaaatccttatgcaccttgcataaatcc 30779387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 36621759 - 36621720
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  36621759 gttatggtgcataaggaaatccttatgcaccgtgcataaa 36621720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 36924242 - 36924285
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  36924242 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 36924285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 37059712 - 37059755
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  37059712 ggttatggtgcataaggaaatccttatgcaccttgcataaatcc 37059755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 45255982 - 45256021
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  45255982 gttatggtgcataaggaaatccttatgcaccgtgcataaa 45256021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 50643750 - 50643789
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  50643750 gttatggtgcataaggaaatccttatgcaccgtgcataaa 50643789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 53865286 - 53865243
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  53865286 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 53865243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 1492673 - 1492715
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  1492673 ggttatggtgcataaggaaatccttatgcaccctgcataaatc 1492715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 367
Target Start/End: Original strand, 26447412 - 26447477
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||| ||||||||||||||||||| ||| | |  |||||||||||| |||||||||    
T  26447412 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccattacttttgcc 26447477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 27764305 - 27764240
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||||||| || ||||||||||||||||||| ||| | |  ||||||||||||||||||||||    
T  27764305 atctgatggttgcgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 27764240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 33819692 - 33819734
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  33819692 ggttatggtgcataaggaaatccttatgcaccctgcataaatc 33819734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 363
Target Start/End: Original strand, 36621701 - 36621762
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    ||||||||||||||| ||||||||||||||||||| ||| | |  ||||||||||||||||||    
T  36621701 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 36621762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 45256040 - 45255975
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||| ||||||| ||||||||||||||||||| ||| | |  ||||||||||||||||||||||    
T  45256040 atctgatagttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 45255975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 50070713 - 50070759
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||    
T  50070713 cgggagtggttatggtgcataaggatttccttatgcaccgtgcataa 50070759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 1728620 - 1728669
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||||| |||| |||||  |||||||||||||||    
T  1728620 gggagtggttatggtgcataagaaaattcttatgtaccgtgcataaatcc 1728669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 2124345 - 2124386
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  2124345 ggttatggtgcataaggaaatccttatgcaccctgcataaat 2124386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 6841822 - 6841863
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  6841822 ggttatggtgcataaggaaatccttatgcaccctgcataaat 6841863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 8157331 - 8157290
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  8157331 gttatggtgcataaggaaatccttatgcaccctgcataaatc 8157290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 364
Target Start/End: Original strand, 22181243 - 22181307
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    ||||||||||||||||| || |||||||||||||||| ||| | |  |||||||||||||||||||    
T  22181243 aaatctgatggttgtgaagtttttatgcacggtgcataagg-atttccttatgcaccataactttt 22181307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 31763151 - 31763110
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  31763151 ggttatggtgcataaggaaatccttatgcaccctgcataaat 31763110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 36309419 - 36309460
Alignment:
Q  196 ttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  36309419 ttatggtgcataaggaaatccttatgcaccctgcataaatcc 36309460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 48076921 - 48076958
Alignment:
Q  202 tgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  48076921 tgcataaggaaatccttatgcaccgtgcataaatccca 48076958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 55782686 - 55782641
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  55782686 gggagtggttatggtgcataaggatttccttatgcaccgtgcataa 55782641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 55846866 - 55846821
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  55846866 gggagtggttatggtgcataaggatttccttatgcaccgtgcataa 55846821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 14499247 - 14499291
Alignment:
Q  189 ggagtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||    
T  14499247 ggagtggttatggtgcataaggatttccttatgcaccgtgcataa 14499291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 21098181 - 21098133
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||| |||||||||| |||||||||||||||| |||| ||||||||||    
T  21098181 gggagcggttatggtgtataaggaaatccttatgcaccatgcataaatc 21098133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 26447467 - 26447431
Alignment:
Q  198 atggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    ||||||||||||||||||||||| |||||||||||||    
T  26447467 atggtgcataaggaaatccttatgcaccgtgcataaa 26447431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 2124588 - 2124545
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||    
T  2124588 ggttatggtgcataaggaaattcttatgcaccctgcataaatcc 2124545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 4168423 - 4168384
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgagga 340  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  4168423 atctgatggttgtgaagtgtttatgcacggtgcataagga 4168384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 8242654 - 8242615
Alignment:
Q  196 ttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  8242654 ttatggtgcataagtaaatccttatacaccgtacataaat 8242615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 12722981 - 12722938
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||    
T  12722981 ggttatggtgcataaggaaattcttatgcaccctgcataaatcc 12722938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 17109720 - 17109763
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||||||||||  ||| |||||||||||    
T  17109720 ggttatggtgcataaggaaatccttatgtaccttgcataaatcc 17109763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 25715770 - 25715727
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||| |||||||||| |||| |||||||||||    
T  25715770 ggttatggtgcataagaaaatccttatgcaccctgcataaatcc 25715727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 38563806 - 38563849
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||| ||||||||||||||||||||||| | |||||||||||    
T  38563806 ggttatagtgcataaggaaatccttatacatcctgcataaatcc 38563849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 43374448 - 43374491
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||||||||||  ||| |||||||||||    
T  43374448 ggttatggtgcataaggaaatccttatgtaccctgcataaatcc 43374491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 51076901 - 51076940
Alignment:
Q  197 tatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  51076901 tatggtgcataaggaaatccttatgcaccctgcataaatc 51076940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 54895405 - 54895448
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||| |||||||||| |||| |||||||||||    
T  54895405 ggttatggtgcataagaaaatccttatgcaccctgcataaatcc 54895448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 637919 - 637885
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcat 335  Q
    ||||||||||||||| |||||||||||||||||||    
T  637919 atctgatggttgtgaagtgtttatgcacggtgcat 637885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 365
Target Start/End: Original strand, 29826604 - 29826669
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttg 365  Q
    ||||||||||||||||| ||| ||||||||||||||| ||| | |  |||||| |||||||||||||    
T  29826604 aaatctgatggttgtgaagtgcttatgcacggtgcataagg-atttccttatgtaccataacttttg 29826669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 29826664 - 29826626
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  29826664 gttatggtacataaggaaatccttatgcaccgtgcataa 29826626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 33883525 - 33883483
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||| |||| |||| |||||||||||    
T  33883525 gttatggtgcataaggaaatcattatgcaccctgcataaatcc 33883483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 36309660 - 36309618
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    |||||||||||||||| |||||||||| |||| ||||||||||    
T  36309660 ggttatggtgcataagaaaatccttatgcaccctgcataaatc 36309618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 367
Target Start/End: Original strand, 50563729 - 50563794
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||| ||||||||||| ||||||| | |||||  ||||||||  ||||||||||||    
T  50563729 atctgatggttgtgaagtgtttatgcagggtgcat-atgaaatatcttatgcataataacttttgcc 50563794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 562776 - 562817
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||| ||| |||| |||||||||    
T  562776 ggttatggtgcataaggaaatccctatgcaccctgcataaat 562817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 265
Target Start/End: Original strand, 9551625 - 9551654
Alignment:
Q  236 cccaacataattgcttcctacacccccaaa 265  Q
    ||||||||||||||||||||||||||||||    
T  9551625 cccaacataattgcttcctacacccccaaa 9551654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 9813188 - 9813147
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||||||||| |||| |||| |||||||||    
T  9813188 ggttatggtgcataaggaaatctttatgcaccctgcataaat 9813147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 31762930 - 31762971
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| || | |||||||||    
T  31762930 ggttatggtgcataaggaaatccttatgcatcctgcataaat 31762971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 33883295 - 33883336
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| || ||||||    
T  33883295 ggttatggtgcataaggaaatccttatgcaccctgtataaat 33883336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 38010753 - 38010712
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||| |||||||||||| |||| |||||||||    
T  38010753 ggttatggtgcatacggaaatccttatgcaccctgcataaat 38010712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 43375564 - 43375523
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||| |||||||||||| |||| |||||||||    
T  43375564 ggttatggtgcatacggaaatccttatgcaccctgcataaat 43375523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 50562679 - 50562716
Alignment:
Q  202 tgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    ||||||||||||||||||| || |||||||||||||||    
T  50562679 tgcataaggaaatccttatgcatcgtgcataaatccca 50562716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 12722738 - 12722782
Alignment:
Q  194 ggttatggtgcataaggaaatccttataca-ccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| || || |||||||||||    
T  12722738 ggttatggtgcataaggaaatccttatgcacccttgcataaatcc 12722782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 48077896 - 48077864
Alignment:
Q  202 tgcataaggaaatccttatacaccgtgcataaa 234  Q
    ||||||||||||||||||| |||||||||||||    
T  48077896 tgcataaggaaatccttatgcaccgtgcataaa 48077864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 9e-78; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 188 - 367
Target Start/End: Complemental strand, 1449721 - 1449542
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||| ||    
T  1449721 gggagtggttatggtgcataagaaaatccttatgcaccgtgcataaatcccaacataattgtttcctacacccccaaagtgagccaaaaccatttttgtt 1449622  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1449621 caaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 1449542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 188 - 368
Target Start/End: Complemental strand, 15493353 - 15493173
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||    
T  15493353 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 15493254  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| |||||||||| |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  15493253 caaaataaaagaaatctaatggttatgatgtgtttatgcacggtacataaggaaatggcttatgcaccataacttttgccg 15493173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 188 - 363
Target Start/End: Complemental strand, 6900982 - 6900807
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||    
T  6900982 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 6900883  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  6900882 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 6900807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 187 - 367
Target Start/End: Complemental strand, 7089262 - 7089082
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |    
T  7089262 cgggagtggttatggtgcataaggaaatccttatgtaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgt 7089163  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  7089162 tcaaaataaaagaaatctgatgattgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 7089082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 187 - 369
Target Start/End: Complemental strand, 31216842 - 31216660
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    ||||| |||||||||||||||||||||| |||||  |||||| |||||| ||||||||||||||||||||||||| ||||||||| |||| ||||||| |    
T  31216842 cgggaatggttatggtgcataaggaaattcttatggaccgtgtataaattccaacataattgcttcctacacccctaaagtgagccaaaaccatttttgt 31216743  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccgg 369  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  31216742 tcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgccgg 31216660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 222 - 367
Target Start/End: Original strand, 1536817 - 1536962
Alignment:
Q  222 caccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttattcaaaattaaagaaatctgatggttgtgatgtgtt 321  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||||||||||||||||||    
T  1536817 caccgtgcataaatcccaatataattgcttcctacacccccaaagcgagccaaaaccatttttattcaaaataaaagaaatctgatggttgtgatgtgtt 1536916  T
Q  322 tatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||||||||| |||||||  ||||||||||||||||||||||    
T  1536917 tatgcacggtgcataaggaaataacttatgcaccataacttttgcc 1536962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 188 - 284
Target Start/End: Original strand, 34869950 - 34870046
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcattttt 284  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| | |||| |||||||    
T  34869950 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcctaacataattgcttcctacacctccaaagtgaaccaaaaccattttt 34870046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 286 - 366
Target Start/End: Original strand, 34870071 - 34870151
Alignment:
Q  286 ttcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgc 366  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||    
T  34870071 ttcaaaatgaaagaaatctgatggttgtgatgtgtttatacatggtgcataaggaaatggcttatgcaccataacttttgc 34870151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 878440 - 878365
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacaccccc 262  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||    
T  878440 cgggagcggttatggtgcataaggaaatccttatgtaccgtgcataaatcccaacataattacttcctacaccccc 878365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 30908713 - 30908655
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  30908713 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataactttt 30908655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 7765453 - 7765406
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7765453 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaat 7765406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 30909486 - 30909437
Alignment:
Q  190 gagtggttatggtgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  30909486 gagtggttatggtgcataaggaattccttatgcaccgtgcataaatccca 30909437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 35121542 - 35121490
Alignment:
Q  213 atccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  35121542 atccttatgcaccgtgcataaatcccaacataattgctt-ctacacccccaaag 35121490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 35119300 - 35119239
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||| ||||||||||||||||||| ||||     ||||||||||||||||||||||    
T  35119300 atctgatggttgtgaagtgtttatgcacggtgcataagga-----cttatgcaccataacttttgcc 35119239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 15035033 - 15034992
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  15035033 gttatggtgcataaggaaatccttatgcaccgtgcataaatc 15034992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 18755658 - 18755703
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||    
T  18755658 gggagtggttatggtgcataaggaaatccttatgcacggtgcataa 18755703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 33345356 - 33345408
Alignment:
Q  213 atccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||| ||||||    
T  33345356 atccttatgcaccgtgcataaatcccaacataattgctt-ctacacctccaaag 33345408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 7764499 - 7764444
Alignment:
Q  309 gttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    ||||||| |||||||| ||||| |||| || |||||||||||||||||||||||||    
T  7764499 gttgtgaagtgtttatacacggcgcataagaaaatggcttatgcaccataactttt 7764444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 12394438 - 12394399
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  12394438 gttatggtgcataaggaaatccttatgcaccgtgcataaa 12394399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 304 - 367
Target Start/End: Original strand, 33346374 - 33346436
Alignment:
Q  304 tgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||||||| ||||||||||||||||||| ||| | |  ||||||||||||||||||||||    
T  33346374 tgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 33346436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 33346429 - 33346390
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  33346429 gttatggtgcataaggaaatccttatgcaccgtgcataaa 33346390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 19284372 - 19284414
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  19284372 ggttatggtgcataaggaaatccttatgcaccctgcataaatc 19284414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 21385032 - 21384990
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  21385032 ggttatggtgcataaggaaatccttatgcaccctgcataaatc 21384990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 266
Target Start/End: Original strand, 24736574 - 24736608
Alignment:
Q  232 aaatcccaacataattgcttcctacacccccaaag 266  Q
    |||||||||||||||||||||||||||||||||||    
T  24736574 aaatcccaacataattgcttcctacacccccaaag 24736608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 266
Target Start/End: Original strand, 24736610 - 24736644
Alignment:
Q  232 aaatcccaacataattgcttcctacacccccaaag 266  Q
    |||||||||||||||||||||||||||||||||||    
T  24736610 aaatcccaacataattgcttcctacacccccaaag 24736644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 10588996 - 10588955
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  10588996 ggttatggtgcataaggaaatccttatgcaccctgcataaat 10588955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 22857489 - 22857530
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  22857489 ggttatggtgcataaggaaatccttatgcaccctgcataaat 22857530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 18611254 - 18611190
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttg 365  Q
    ||||||||||||||| |||||||||||  |||||| | |||||| ||||||||  ||||||||||    
T  18611254 atctgatggttgtgaagtgtttatgcagagtgcataaagaaatgtcttatgcataataacttttg 18611190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 4101964 - 4102011
Alignment:
Q  192 gtggttatggtgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    |||||||| ||||||||||||||  |||| ||||||||||||||||||    
T  4101964 gtggttatagtgcataaggaaatgtttatgcaccgtgcataaatccca 4102011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 14237779 - 14237822
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| | |||||||||    
T  14237779 ggttatggtgcataaggaaatccttatgcaccctacataaatcc 14237822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 241
Target Start/End: Complemental strand, 18612397 - 18612358
Alignment:
Q  202 tgcataaggaaatccttatacaccgtgcataaatcccaac 241  Q
    ||||||||||||||||||| |||||| |||||||||||||    
T  18612397 tgcataaggaaatccttatgcaccgtacataaatcccaac 18612358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 20522893 - 20522850
Alignment:
Q  192 gtggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||||| |||| | |||||||    
T  20522893 gtggttatggtgcataaggaaatccttatgcaccctacataaat 20522850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 301 - 372
Target Start/End: Original strand, 22042300 - 22042370
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccggaaa 372  Q
    ||||||||||||||||    ||||||| ||||||| ||  | ||||||||||||||||||||||||||||||    
T  22042300 atctgatggttgtgattaacttatgcatggtgcataagtta-tggcttatgcaccataacttttgccggaaa 22042370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 22857720 - 22857677
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||| |||||||||| |||| |||||||||||    
T  22857720 ggttatggtgcataagaaaatccttatgcaccctgcataaatcc 22857677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 25119513 - 25119470
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| || | |||||||||||    
T  25119513 ggttatggtgcataaggaaatccttatgcagcctgcataaatcc 25119470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 4338618 - 4338672
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgca 353  Q
    |||||||||| || ||| ||||||||||| ||||||| || ||||||||||||||    
T  4338618 aaatctgatgattttgaagtgtttatgcagggtgcataagaaaatggcttatgca 4338672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 10698578 - 10698620
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||||||||||||||||||||||| | |||| ||||||||||    
T  10698578 ggttatggtgcataaggaaatccttgtgcaccctgcataaatc 10698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 353
Target Start/End: Original strand, 16968021 - 16968075
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgca 353  Q
    |||| |||||||| ||| ||||||||||| ||||||| || ||||||||||||||    
T  16968021 aaatttgatggttatgaagtgtttatgcagggtgcataagaaaatggcttatgca 16968075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 335
Target Start/End: Original strand, 24737691 - 24737725
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcat 335  Q
    ||||||||||||||| |||||||||||||||||||    
T  24737691 atctgatggttgtgaagtgtttatgcacggtgcat 24737725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 28132829 - 28132783
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    |||| ||||||||||||||||||||  ||||||| ||||||||||||    
T  28132829 cgggtgtggttatggtgcataaggatttccttatgcaccgtgcataa 28132783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 19281284 - 19281325
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||| | |||| |||||||||    
T  19281284 ggttatggtgcataaggaaatccttgtgcaccctgcataaat 19281325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 25119107 - 25119148
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||| ||||| |||| |||||||||    
T  25119107 ggttatggtgcataaggaaattcttatgcaccctgcataaat 25119148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 12394387 - 12394442
Alignment:
Q  308 ggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    |||||||| ||||||||||||||||||| ||| | |  |||||||||||||||||||    
T  12394387 ggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataactttt 12394442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 27079939 - 27079991
Alignment:
Q  310 ttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactt 362  Q
    |||||| ||||||||||||||||||| || ||||| ||||||||  |||||||    
T  27079939 ttgtgaagtgtttatgcacggtgcataagaaaatgacttatgcataataactt 27079991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 34399648 - 34399680
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgt 227  Q
    |||||||||||||||||||||||||| ||||||    
T  34399648 gttatggtgcataaggaaatccttatgcaccgt 34399680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 141; Significance: 1e-73; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 188 - 368
Target Start/End: Complemental strand, 24453 - 24273
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||| ||    
T  24453 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgaaccaaaaccatttttgtt 24354  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| |||||||| | |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  24353 caaaatcaaagaaatttaatggttgtgatgtgtttatgcacggtacataaggaaatggcttatgcaccataacttttgccg 24273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 44777 - 44814
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacacc 225  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  44777 gggagtggttatggtgcataaggaaattcttatgcacc 44814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 1e-73; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 188 - 368
Target Start/End: Complemental strand, 19784450 - 19784270
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| ||    
T  19784450 gggagtggttatgatgcataaggaaatccttatgcattgtgcataaatcccaacataattgcttcctacaccctcaaagtgagccaaaaccatttttgtt 19784351  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19784350 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgccg 19784270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 187 - 367
Target Start/End: Complemental strand, 10237534 - 10237354
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||| |||| ||||||| |    
T  10237534 cgggagtggttatggtgcataaggaaatccttatgcaccgtgtataaatcccaacataattgctttctacacccccaaagtgagccaaaaccatttttgt 10237435  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  10237434 tcaaaataaaaaaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 10237354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 188 - 367
Target Start/End: Complemental strand, 41099364 - 41099182
Alignment:
Q  188 gggagtggttatggtgcataaggaaatc---cttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcattttt 284  Q
    ||||||||||||||||||||||||||||   ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  41099364 gggagtggttatggtgcataaggaaatcatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccattttt 41099265  T
Q  285 attcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  41099264 gttcaaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 41099182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 188 - 367
Target Start/End: Original strand, 34633208 - 34633387
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||| |||| ||||||| ||    
T  34633208 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcttacaccctcaaagtgagccaaaaccatttttgtt 34633307  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| |||||||||||||||    
T  34633308 caaaataaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaataacttatgtaccataacttttgcc 34633387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 188 - 367
Target Start/End: Complemental strand, 41451284 - 41451105
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    |||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| ||    
T  41451284 gggagtggttatggtgtataaggaaatccttatgcactgtgcataaatcccaacataattgcttcctacacctccaaagtgagccaaaaccatttttgtt 41451185  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41451184 caaaataaaagaaatctgatgattgtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 41451105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 188 - 367
Target Start/End: Original strand, 1149910 - 1150089
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||||| ||    
T  1149910 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaattccaacataattgcttcctacacctccaaagtgagccaaaaccatttttgtt 1150009  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||    
T  1150010 caaaataaaagaaatatgatggttgtgatgtgtttatgcacggtgcataagggaataacttatgcaccataacttttgcc 1150089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 188 - 367
Target Start/End: Complemental strand, 30414093 - 30413914
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttatt 287  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | | | ||||||  |||| ||||||| ||    
T  30414093 gggagtggttatggtgcataaggaaatctttatgcaccgtgcataaatcccaacataattgcttcctacatctctagagtgaggtaaaaccatttttgtt 30413994  T
Q  288 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||    
T  30413993 caaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatgacttatgcagcataacttttgcc 30413914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 187 - 368
Target Start/End: Complemental strand, 15227210 - 15227029
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttat 286  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||  |  ||||||||| |||| ||||||| |    
T  15227210 cgggagtggttatggtgcataaggaaatccttatgcaccgtacataaatcccaacataattgcttcctacattcttaaagtgagccaaaaccatttttgt 15227111  T
Q  287 tcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||  |||||||||||||||||||||||    
T  15227110 tcaaaataaaagaaatctgatggttgtaatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccg 15227029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 226 - 368
Target Start/End: Complemental strand, 7857821 - 7857679
Alignment:
Q  226 gtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttattcaaaattaaagaaatctgatggttgtgatgtgtttatg 325  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| |||||||||| ||||||||||||||||    
T  7857821 gtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaattaaaaaaatctgatgattgtgatgtgtttatg 7857722  T
Q  326 cacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    ||||| |||| || |||||||||||||||||||||||||||||    
T  7857721 cacggcgcataagaaaatggcttatgcaccataacttttgccg 7857679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 223 - 367
Target Start/End: Complemental strand, 43690784 - 43690640
Alignment:
Q  223 accgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttattcaaaattaaagaaatctgatggttgtgatgtgttt 322  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||| ||| ||||||||||||||||||||||||    
T  43690784 accgtgcataaatcccaacataattgctttctacacccccaaagtgagccaaaaccatttttgttcaaaataaaaaaaatctgatggttgtgatgtgttt 43690685  T
Q  323 atgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||| |||||||  ||||||||||||||||||||||    
T  43690684 atgcacggtgcataaggaaataacttatgcaccataacttttgcc 43690640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 4835512 - 4835591
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4835512 cgggagcggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 4835591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 196 - 265
Target Start/End: Complemental strand, 1209827 - 1209758
Alignment:
Q  196 ttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaa 265  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1209827 ttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 1209758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 39657709 - 39657781
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  39657709 ggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccctaaag 39657781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 188 - 265
Target Start/End: Complemental strand, 2751284 - 2751207
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaa 265  Q
    ||||| |||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  2751284 gggagcggttatggtgcataagaaaatccttatgcaccgtgcatgaatcccaacataattgcttcctacacccccaaa 2751207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 4840974 - 4841036
Alignment:
Q  204 cataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4840974 cataaggaaatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 4841036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 7059208 - 7059144
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacac 258  Q
    |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| |||||||||    
T  7059208 ggttatggtgcataaggaaatcattatgcaccgtgcataaattccaacataattgtttcctacac 7059144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 9852331 - 9852273
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  9852331 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataactttt 9852273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 34648133 - 34648191
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  34648133 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataactttt 34648191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 35301624 - 35301672
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35301624 gggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatc 35301672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 304 - 367
Target Start/End: Original strand, 15260854 - 15260917
Alignment:
Q  304 tgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||||||| ||||||||||||||||||| ||||||   ||||||||||||||||||||||    
T  15260854 tgatggttgtgaagtgtttatgcacggtgcataaggaaaatccttatgcaccataacttttgcc 15260917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 306 - 360
Target Start/End: Complemental strand, 23396538 - 23396484
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataac 360  Q
    |||||||| | ||||||||||||||||||| ||||||||||||||||||||||||    
T  23396538 atggttgtaaagtgtttatgcacggtgcataaggaaatggcttatgcaccataac 23396484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 15259850 - 15259903
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaac 241  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  15259850 gggagcggttatggggcataaggaaatccttatgcaccgtgcataaatcccaac 15259903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 23397493 - 23397441
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    ||||| |||||||||||||||||||||||||||| |||| |||||||||||||    
T  23397493 cgggaatggttatggtgcataaggaaatccttatgcaccatgcataaatccca 23397441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 367
Target Start/End: Original strand, 32987445 - 32987510
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||| ||||||||||||||||||| ||| | |  ||||||||||||||||||||||    
T  32987445 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 32987510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 35302591 - 35302649
Alignment:
Q  306 atggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    |||||||||| ||||||||||||||||||| || ||||| | |||||||||||||||||    
T  35302591 atggttgtgaagtgtttatgcacggtgcataagaaaatgtcctatgcaccataactttt 35302649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 40023279 - 40023325
Alignment:
Q  318 tgtttatgcacggtgcatgaggaaatggcttatgcaccataactttt 364  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||    
T  40023279 tgtttatgcacggtgtataaggaaatggcttatgcaccataactttt 40023325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 34647169 - 34647214
Alignment:
Q  191 agtggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||    
T  34647169 agtggttatggtgcataaggaaatccttatgcaccgtgtataaatc 34647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 9853306 - 9853254
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    ||||||||||||||||||||||  |||||||||| ||| ||||||||||||||    
T  9853306 cgggagtggttatggtgcataaaaaaatccttatgcactgtgcataaatccca 9853254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 13526669 - 13526733
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    ||||||||||||||||| |||||||||||  || ||| |||||||||||||||||  ||||||||    
T  13526669 aaatctgatggttgtgaagtgtttatgcagagtacataaggaaatggcttatgcataataacttt 13526733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 13616204 - 13616268
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    ||||||||||||||||| |||||||||||  || ||| |||||||||||||||||  ||||||||    
T  13616204 aaatctgatggttgtgaagtgtttatgcagagtacataaggaaatggcttatgcataataacttt 13616268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 39023048 - 39023000
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  39023048 gggagcggttatggtgcataaggaaattcttatacaccgtgtataaatc 39023000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 367
Target Start/End: Complemental strand, 42433768 - 42433701
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||||| ||| ||||||||||||||| ||| | |  ||||||||||||||||||||||    
T  42433768 aaatctgatggttgtgaagtgcttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 42433701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 1208716 - 1208755
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  1208716 gttatggtgcataaggaaatccttatgcaccgtgcataaa 1208755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 17792935 - 17792892
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  17792935 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 17792892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 32987503 - 32987464
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  32987503 gttatggtgcataaggaaatccttatgcaccgtgcataaa 32987464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 35448653 - 35448610
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  35448653 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 35448610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 39021982 - 39022021
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  39021982 gttatggtgcataaggaaatccttatgcaccgtgcataaa 39022021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 40247288 - 40247347
Alignment:
Q  304 tgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    |||||||||||| ||||||||||| ||||||| |||||||| ||||||||  ||||||||    
T  40247288 tgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 40247347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 1672973 - 1672931
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||||||||| |||| |||||||||||    
T  1672973 gttatggtgcataaggaaatccttatgcaccctgcataaatcc 1672931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 368
Target Start/End: Complemental strand, 2522924 - 2522866
Alignment:
Q  310 ttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| ||||||||||| ||||||| |||||||| ||||||||  |||||||||||||    
T  2522924 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttgccg 2522866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 27506708 - 27506750
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||||||||||||| |||| |||||||||||    
T  27506708 gttatggtgcataaggaaatccttatgcaccctgcataaatcc 27506750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 39022040 - 39021975
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||||||| |||||| ||||||||||||||||||| ||| | |  ||||||||||||||||||||||    
T  39022040 atctgatgattgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 39021975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 42433708 - 42433746
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  42433708 gttatggtgcataaggaaatccttatgcaccgtgcataa 42433746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 42434611 - 42434566
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  42434611 gggagtggttatggtgcataaggatttccttatgcaccgtgcataa 42434566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 8550569 - 8550529
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaa 341  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  8550569 atctgatggttgtgaagtgtttatgcacggtgcataaggaa 8550529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 40022386 - 40022430
Alignment:
Q  191 agtggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||||||||||||||||| ||| ||| ||||||    
T  40022386 agtggttatggtgcataaggaaatccttatgcactgtgtataaat 40022430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 185880 - 185923
Alignment:
Q  192 gtggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||||| |||  |||||||||    
T  185880 gtggttatggtgcataaggaaatccttatgcactctgcataaat 185923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 7058121 - 7058160
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  7058121 gttatggtgcataaggaaatacttatgcaccgtgcataaa 7058160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 15808886 - 15808929
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||||||||||||||| |||||||||| |||| |||||||||||    
T  15808886 ggttatggtgcataagaaaatccttatgcaccctgcataaatcc 15808929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 17656619 - 17656662
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||  |||||||||||    
T  17656619 ggttatggtgcataaggaaatccttatgcactctgcataaatcc 17656662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 23567487 - 23567530
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||  |||||||||||    
T  23567487 ggttatggtgcataaggaaatccttatgcactctgcataaatcc 23567530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 23567686 - 23567643
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||    
T  23567686 ggttatggtgcataaggaaattcttatgcaccctgcataaatcc 23567643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 546 - 621
Target Start/End: Complemental strand, 37602381 - 37602306
Alignment:
Q  546 cctcgtcttcactgaatcttccagcagagcaaattcggtcaaagagctctccaccagcagcatactccataactat 621  Q
    ||||||| ||||||||||| |||||||  |||||||  ||||| || ||||| ||||||||||| ||||| |||||    
T  37602381 cctcgtcctcactgaatctaccagcagtacaaattctttcaaatagttctcccccagcagcatattccatcactat 37602306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 1208774 - 1208709
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||| |||||||| | ||||||||||||||||||| ||| | |  ||||||||||||||||||||||    
T  1208774 atcttatggttgtaaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 1208709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 1672803 - 1672769
Alignment:
Q  205 ataaggaaatccttatacaccgtgcataaatccca 239  Q
    |||||||||||||||| ||||||||||||||||||    
T  1672803 ataaggaaatccttatgcaccgtgcataaatccca 1672769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 335
Target Start/End: Original strand, 4836701 - 4836735
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcat 335  Q
    ||||||||||||||| |||||||||||||||||||    
T  4836701 atctgatggttgtgaagtgtttatgcacggtgcat 4836735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 335
Target Start/End: Original strand, 4842146 - 4842180
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcat 335  Q
    ||||||||||||||| |||||||||||||||||||    
T  4842146 atctgatggttgtgaagtgtttatgcacggtgcat 4842180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 317 - 363
Target Start/End: Original strand, 10443586 - 10443632
Alignment:
Q  317 gtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    ||||||||||| ||||||| |||||||||||||||||  ||||||||    
T  10443586 gtgtttatgcagggtgcataaggaaatggcttatgcataataacttt 10443632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 12355488 - 12355422
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||| |||||||||| ||||||||||| ||||||| || ||||| |||||||   ||||||||||||    
T  12355488 atctaatggttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcgtaataacttttgcc 12355422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 17232926 - 17232881
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||||    
T  17232926 cgggagtggttatggtgcataaggatat-cttatgcaccgtgcataa 17232881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 18757371 - 18757329
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||    
T  18757371 ggttatggtgcataaagaaatccttatgcaccctgcataaatc 18757329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 40004716 - 40004758
Alignment:
Q  191 agtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    |||||||||||||||||||||  ||||||| ||||||||||||    
T  40004716 agtggttatggtgcataaggatttccttatgcaccgtgcataa 40004758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 367
Target Start/End: Original strand, 40012186 - 40012247
Alignment:
Q  305 gatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||| | || |||||||| ||||||| |||||||  ||||||||||||||||||||||    
T  40012186 gatggttgtaaagtctttatgcatggtgcataaggaaatc-cttatgcaccataacttttgcc 40012247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 10586104 - 10586063
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||| ||||||||||||||||||| |||| |||||||||    
T  10586104 ggttatgatgcataaggaaatccttatgcaccctgcataaat 10586063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 15809883 - 15809842
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| | |||||||    
T  15809883 ggttatggtgcataaggaaatccttatgcaccctccataaat 15809842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 21120195 - 21120236
Alignment:
Q  196 ttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||| ||||||||||| |||| |||||||||||    
T  21120195 ttatggtgcataatgaaatccttatgcaccatgcataaatcc 21120236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 24473287 - 24473246
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| || ||||||    
T  24473287 ggttatggtgcataaggaaatccttatgcaccctgtataaat 24473246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 28698578 - 28698643
Alignment:
Q  299 aaatctgatggttgtgatgtgttta-tgcacggtgcatgaggaaatggcttatgcaccataacttt 363  Q
    |||||||||||||||||  |||||| |||| ||||||| || ||||||||||||||  ||||||||    
T  28698578 aaatctgatggttgtgaaatgtttaatgcagggtgcataagaaaatggcttatgcataataacttt 28698643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 213 - 368
Target Start/End: Original strand, 8333 - 8488
Alignment:
Q  213 atccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcatttttattcaaaattaaagaaatctgatggttg 312  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||  |||||| |||||||| ||||||||||||||||||    
T  8333 atccttatgcaccgtgcataaatcccaacataattgctttctacaccctcaaagtgagccaaaactatttttgttcaaaataaaagaaatctgatggttg 8432  T
Q  313 tgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  8433 tgatgtgtttatgcacagtgcataaggaaatggcttatgcaccataacttttgccg 8488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 539 - 636
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagcaaaaatcattttt 284  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||    
T  539 cgggagtggttatggtgcataaggaaatccttatgcaccgtgcataaatcccaatataattgcttcctacacccccaaagtgagccaaaaccattttt 636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 286 - 368
Target Start/End: Original strand, 661 - 743
Alignment:
Q  286 ttcaaaattaaagaaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  661 ttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgccg 743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 6555 - 6484
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaatcccaacataattgcttcctacacccccaaag 266  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  6555 gttatggtgcataaggaaatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaag 6484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 25230 - 25297
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||||| ||||||||||||||||||| ||| | |  ||||||||||||||||||||||    
T  25230 aaatctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 25297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 25290 - 25251
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  25290 gttatggtgcataaggaaatccttatgcaccgtgcataaa 25251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 10733 - 10694
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10733 gttatggtgcataaggaaatccttatacaccgtgcataaa 10694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 301 - 366
Target Start/End: Original strand, 10675 - 10739
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgc 366  Q
    ||||||||||||||| |||||||||||||||| || ||| | |  |||||||||||||||||||||    
T  10675 atctgatggttgtgaagtgtttatgcacggtgtataagg-atttccttatgcaccataacttttgc 10739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 28725 - 28673
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    |||||| ||||||||||||||||||||||||| | |||||||| |||||||||    
T  28725 cgggagcggttatggtgcataaggaaatccttttgcaccgtgcttaaatccca 28673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 236 - 264
Target Start/End: Complemental strand, 28656 - 28628
Alignment:
Q  236 cccaacataattgcttcctacacccccaa 264  Q
    |||||||||||||||||||||||||||||    
T  28656 cccaacataattgcttcctacacccccaa 28628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 1291 - 1248
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  1291 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 1248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 23545 - 23588
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  23545 ggttatggtgcataaggaaatccttatgcaccctgcataaatcc 23588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 23776 - 23736
Alignment:
Q  196 ttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  23776 ttatggtgcataaggaaatccttatgcaccctgcataaatc 23736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 13620 - 13659
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  13620 gttatggtgcataaggaaatccttatccaccgtgcataaa 13659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 367
Target Start/End: Complemental strand, 13678 - 13613
Alignment:
Q  301 atctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    ||||||||||||||| |||||||||||||||| || ||| | |  ||||||||||||||||||||||    
T  13678 atctgatggttgtgaagtgtttatgcacggtggataagg-atttccttatgcaccataacttttgcc 13613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 20974 - 21017
Alignment:
Q  190 gagtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  20974 gagtggttatggtgcataagaaaatccttatgcaccgtgcataa 21017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 33617 - 33659
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  33617 ggttatggtgcataaggaaatccttatgcaccctgcataaatc 33659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 51899 - 51949
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataaatcc 237  Q
    |||| ||| ||||||||||||||||||||||||| |||| |||||||||||    
T  51899 cgggtgtgattatggtgcataaggaaatccttatgcaccctgcataaatcc 51949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 202913 - 202958
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaatccca 239  Q
    |||||||||||||||||||||| |||| ||||||||| ||||||||    
T  202913 ggttatggtgcataaggaaatcattatgcaccgtgcacaaatccca 202958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 20479 - 20524
Alignment:
Q  188 gggagtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||    
T  20479 gggagtggttatggtgcataaggatttccttatgcaccgtgcataa 20524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 20163 - 20122
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  20163 ggttatggtgcataaggaaatccttatgcaccctgcataaat 20122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 310 - 369
Target Start/End: Complemental strand, 1661 - 1602
Alignment:
Q  310 ttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccgg 369  Q
    |||||| ||||||||||| ||||||| |||||||| ||||||||  |||| |||||||||    
T  1661 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataatttttgccgg 1602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 7024 - 7063
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaa 234  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  7024 gttatggtgcataacgaaatctttatacaccgtgcataaa 7063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 10735 - 10689
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    |||| ||||||||||||||||||||  ||||||| ||||||||||||    
T  10735 cgggtgtggttatggtgcataaggatttccttatgcaccgtgcataa 10689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 11248 - 11210
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  11248 gttatggtgcataaggaaatccttatgcactgtgcataa 11210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 299 - 367
Target Start/End: Original strand, 11188 - 11255
Alignment:
Q  299 aaatctgatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgcc 367  Q
    |||| |||||||||||| ||| |||||||| |||||| ||| | |  ||||||||||||||||||||||    
T  11188 aaatatgatggttgtgaagtgcttatgcacagtgcataagg-atttccttatgcaccataacttttgcc 11255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 37529 - 37483
Alignment:
Q  187 cgggagtggttatggtgcataaggaaatccttatacaccgtgcataa 233  Q
    ||||| |||||||||||||||||||  ||||||| ||||||||||||    
T  37529 cgggattggttatggtgcataaggatttccttatgcaccgtgcataa 37483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 310 - 368
Target Start/End: Complemental strand, 209383 - 209325
Alignment:
Q  310 ttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgccg 368  Q
    |||||| ||||||||||| ||||||| || ||||| ||||||||  |||||||||||||    
T  209383 ttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataacttttgccg 209325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 366
Target Start/End: Complemental strand, 2508 - 2448
Alignment:
Q  305 gatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgc 366  Q
    |||||||||||| |  ||||||||||||||| |||||||  ||||| |||||||||||||||    
T  2508 gatggttgtgatttccttatgcacggtgcataaggaaat-ccttatacaccataacttttgc 2448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 366
Target Start/End: Complemental strand, 5920 - 5860
Alignment:
Q  305 gatggttgtgatgtgtttatgcacggtgcatgaggaaatggcttatgcaccataacttttgc 366  Q
    |||||||||||| |  ||||||||||||||| |||||||  ||||| |||||||||||||||    
T  5920 gatggttgtgatttccttatgcacggtgcataaggaaat-ccttatacaccataacttttgc 5860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 17982 - 17942
Alignment:
Q  194 ggttatggtgcataaggaaatccttatacaccgtgcataaat 235  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  17982 ggttatggtgcataaggaaatcctta-acaccctgcataaat 17942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 96001 - 96042
Alignment:
Q  195 gttatggtgcataaggaaatccttatacaccgtgcataaatc 236  Q
    ||||||||||||||| |||||||||| |||| ||||||||||    
T  96001 gttatggtgcataagaaaatccttatgcaccctgcataaatc 96042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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