View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11520_high_14 (Length: 237)
Name: NF11520_high_14
Description: NF11520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11520_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 16 - 225
Target Start/End: Complemental strand, 3065613 - 3065404
Alignment:
| Q |
16 |
ttatttttgcggagatcatgcaagttgttccaattcatccacgaccaaagtaaataggtggaaactgaaggaaattcagatggagtagtacaacaagttc |
115 |
Q |
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| T |
3065613 |
ttatttttgcggagatcatgcaagttgttccaattcatccacaaccaaagtaaatgggtggaaactgaaggaaattcagatggagtagtacaacaagttc |
3065514 |
T |
|
| Q |
116 |
tacttgaaataagaaaaatgaacatgacagaagaagaggtgaggatggttttaggacgaaaatggccggaggcagctggagtggctccaagacgacaggg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3065513 |
tacttgaaataagaaaaatgaacatgacagaagaagaggtgaggatggttttaggacgaaaatggccggaggcagctggagtggctccaagacgacaggg |
3065414 |
T |
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| Q |
216 |
tgagtctctg |
225 |
Q |
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| T |
3065413 |
tgagtctctg |
3065404 |
T |
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