View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11520_high_7 (Length: 333)

Name: NF11520_high_7
Description: NF11520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11520_high_7
NF11520_high_7
[»] chr4 (29 HSPs)
chr4 (152-315)||(29586398-29586566)
chr4 (6-150)||(21310427-21310571)
chr4 (15-150)||(25704653-25704788)
chr4 (5-150)||(24706377-24706522)
chr4 (5-150)||(40122615-40122760)
chr4 (5-150)||(14261046-14261191)
chr4 (15-150)||(12071563-12071698)
chr4 (15-150)||(22321407-22321542)
chr4 (5-150)||(21661665-21661810)
chr4 (5-150)||(21670429-21670574)
chr4 (15-150)||(34324722-34324858)
chr4 (5-150)||(44568839-44568984)
chr4 (5-145)||(50767871-50768011)
chr4 (15-146)||(20249153-20249283)
chr4 (6-150)||(31892240-31892380)
chr4 (36-122)||(1988065-1988151)
chr4 (15-104)||(20714488-20714577)
chr4 (15-101)||(32543532-32543617)
chr4 (23-146)||(26676714-26676837)
chr4 (20-102)||(6129093-6129175)
chr4 (15-127)||(19692748-19692860)
chr4 (15-127)||(19703333-19703445)
chr4 (5-84)||(18507394-18507472)
chr4 (37-92)||(34284179-34284234)
chr4 (99-137)||(19361662-19361700)
chr4 (15-80)||(21064834-21064897)
chr4 (67-104)||(48652268-48652305)
chr4 (15-55)||(51777715-51777755)
chr4 (111-145)||(19362189-19362223)
[»] chr7 (18 HSPs)
chr7 (5-150)||(10981510-10981655)
chr7 (5-155)||(36453254-36453404)
chr7 (5-150)||(27813813-27813958)
chr7 (5-150)||(40348962-40349107)
chr7 (15-150)||(47110453-47110586)
chr7 (5-150)||(25614483-25614626)
chr7 (6-104)||(3091565-3091663)
chr7 (12-102)||(16662146-16662234)
chr7 (12-102)||(17636506-17636594)
chr7 (15-92)||(27942179-27942256)
chr7 (23-94)||(16360442-16360511)
chr7 (99-150)||(25060133-25060184)
chr7 (15-129)||(37983179-37983289)
chr7 (20-104)||(7743542-7743625)
chr7 (99-150)||(2911548-2911599)
chr7 (15-94)||(3498894-3498973)
chr7 (111-146)||(25059456-25059491)
chr7 (124-156)||(46103597-46103629)
[»] chr6 (23 HSPs)
chr6 (5-150)||(29260194-29260339)
chr6 (15-150)||(1605581-1605716)
chr6 (5-145)||(30734613-30734753)
chr6 (5-150)||(8626484-8626629)
chr6 (15-146)||(13757214-13757345)
chr6 (15-150)||(7761303-7761436)
chr6 (15-150)||(15064834-15064969)
chr6 (5-137)||(31559866-31559998)
chr6 (5-150)||(4129437-4129574)
chr6 (5-150)||(17942445-17942592)
chr6 (15-150)||(8235626-8235761)
chr6 (36-146)||(30734771-30734879)
chr6 (15-103)||(14287038-14287125)
chr6 (99-150)||(19996715-19996766)
chr6 (22-104)||(3798151-3798233)
chr6 (15-101)||(21277574-21277659)
chr6 (20-101)||(11370630-11370711)
chr6 (111-150)||(19996324-19996363)
chr6 (15-102)||(26860819-26860902)
chr6 (61-94)||(33845469-33845502)
chr6 (6-102)||(1814645-1814741)
chr6 (114-150)||(15064697-15064733)
chr6 (114-150)||(17942682-17942718)
[»] chr2 (20 HSPs)
chr2 (5-150)||(1102505-1102650)
chr2 (5-150)||(23366791-23366936)
chr2 (5-150)||(39938172-39938317)
chr2 (15-150)||(3518910-3519045)
chr2 (15-150)||(12969879-12970014)
chr2 (25-150)||(37673887-37674012)
chr2 (5-124)||(1646317-1646434)
chr2 (15-75)||(22388275-22388335)
chr2 (99-157)||(34224378-34224436)
chr2 (30-104)||(35179090-35179164)
chr2 (15-104)||(18078104-18078193)
chr2 (15-104)||(19976380-19976468)
chr2 (15-93)||(14779838-14779914)
chr2 (15-101)||(32840312-32840401)
chr2 (25-94)||(39562037-39562104)
chr2 (67-142)||(1002922-1002997)
chr2 (20-89)||(34242040-34242107)
chr2 (114-155)||(40756908-40756949)
chr2 (124-152)||(5404996-5405024)
chr2 (114-150)||(12969742-12969778)
[»] chr1 (38 HSPs)
chr1 (5-150)||(23045409-23045554)
chr1 (5-150)||(284335-284480)
chr1 (5-150)||(40783787-40783932)
chr1 (15-150)||(321628-321763)
chr1 (15-150)||(24772045-24772180)
chr1 (15-150)||(27211104-27211239)
chr1 (15-150)||(23526242-23526377)
chr1 (5-155)||(47037982-47038130)
chr1 (15-145)||(46771644-46771774)
chr1 (15-132)||(33082765-33082882)
chr1 (15-137)||(52037262-52037382)
chr1 (5-145)||(1749314-1749454)
chr1 (24-101)||(1837978-1838053)
chr1 (15-150)||(51064893-51065031)
chr1 (99-150)||(3943062-3943113)
chr1 (18-93)||(7765072-7765147)
chr1 (99-150)||(9588672-9588723)
chr1 (15-104)||(31003926-31004012)
chr1 (99-150)||(41959080-41959131)
chr1 (30-104)||(3657125-3657199)
chr1 (23-150)||(40261419-40261547)
chr1 (99-155)||(13984991-13985047)
chr1 (15-93)||(18396754-18396832)
chr1 (15-104)||(52478016-52478103)
chr1 (15-84)||(31061594-31061662)
chr1 (27-92)||(40562733-40562797)
chr1 (111-150)||(44227850-44227889)
chr1 (15-102)||(27143151-27143239)
chr1 (86-138)||(40564241-40564293)
chr1 (99-147)||(44228228-44228276)
chr1 (111-150)||(3943763-3943802)
chr1 (111-150)||(41959809-41959848)
chr1 (111-150)||(9589631-9589670)
chr1 (69-104)||(14351954-14351989)
chr1 (15-84)||(24876633-24876699)
chr1 (15-104)||(34458863-34458950)
chr1 (99-144)||(1168369-1168414)
chr1 (15-60)||(37926900-37926945)
[»] chr5 (21 HSPs)
chr5 (8-150)||(25773651-25773793)
chr5 (15-155)||(12806993-12807133)
chr5 (5-150)||(30720622-30720767)
chr5 (5-150)||(10285187-10285332)
chr5 (5-150)||(36561229-36561374)
chr5 (5-150)||(40886740-40886885)
chr5 (15-150)||(37900764-37900899)
chr5 (15-141)||(7277562-7277688)
chr5 (15-114)||(25683368-25683467)
chr5 (18-150)||(16983260-16983393)
chr5 (27-102)||(23098386-23098461)
chr5 (15-149)||(734478-734611)
chr5 (15-104)||(30403101-30403191)
chr5 (15-150)||(39070885-39071020)
chr5 (15-147)||(11319564-11319696)
chr5 (103-150)||(15305216-15305263)
chr5 (15-93)||(16054173-16054249)
chr5 (15-92)||(1056422-1056498)
chr5 (111-150)||(15304824-15304863)
chr5 (44-150)||(11796453-11796559)
chr5 (114-150)||(25683231-25683267)
[»] scaffold1431 (1 HSPs)
scaffold1431 (5-146)||(29-170)
[»] chr8 (33 HSPs)
chr8 (5-150)||(11174353-11174498)
chr8 (5-150)||(40058433-40058578)
chr8 (15-147)||(2540071-2540203)
chr8 (17-155)||(3585448-3585586)
chr8 (5-150)||(43275529-43275672)
chr8 (17-150)||(11646467-11646600)
chr8 (5-150)||(37345573-37345718)
chr8 (5-150)||(7146915-7147060)
chr8 (5-150)||(40918861-40919004)
chr8 (15-145)||(30999663-30999791)
chr8 (17-150)||(36068082-36068215)
chr8 (15-150)||(27034999-27035133)
chr8 (6-150)||(20546420-20546562)
chr8 (20-147)||(28562426-28562554)
chr8 (15-104)||(28326797-28326883)
chr8 (15-94)||(13881094-13881174)
chr8 (15-151)||(35866615-35866751)
chr8 (99-150)||(8697898-8697949)
chr8 (99-150)||(41307961-41308012)
chr8 (99-150)||(45278701-45278752)
chr8 (99-147)||(10646597-10646645)
chr8 (99-150)||(40486453-40486504)
chr8 (15-104)||(37510314-37510403)
chr8 (20-147)||(28567924-28568051)
chr8 (20-147)||(28575517-28575644)
chr8 (20-93)||(10181002-10181074)
chr8 (15-102)||(30906828-30906917)
chr8 (111-146)||(41305768-41305803)
chr8 (23-101)||(27563999-27564075)
chr8 (114-159)||(40058296-40058341)
chr8 (20-92)||(30268530-30268602)
chr8 (124-152)||(42587248-42587276)
chr8 (111-143)||(45278021-45278053)
[»] chr3 (36 HSPs)
chr3 (5-150)||(13364845-13364990)
chr3 (5-150)||(198857-199002)
chr3 (5-150)||(46694240-46694385)
chr3 (8-150)||(29375140-29375282)
chr3 (5-150)||(3383078-3383223)
chr3 (17-150)||(19241810-19241943)
chr3 (5-150)||(36881284-36881427)
chr3 (5-150)||(23088061-23088206)
chr3 (15-150)||(43750139-43750274)
chr3 (48-145)||(32835129-32835226)
chr3 (31-150)||(13702771-13702890)
chr3 (74-150)||(27707363-27707439)
chr3 (20-93)||(37780996-37781069)
chr3 (99-150)||(12094584-12094635)
chr3 (15-100)||(19897067-19897152)
chr3 (99-150)||(19911511-19911562)
chr3 (67-150)||(37293439-37293522)
chr3 (99-150)||(44277455-44277506)
chr3 (24-101)||(1455297-1455374)
chr3 (99-155)||(38805242-38805298)
chr3 (67-135)||(48820444-48820512)
chr3 (6-64)||(27707119-27707177)
chr3 (15-145)||(53559750-53559880)
chr3 (83-150)||(48963158-48963223)
chr3 (111-150)||(19912174-19912213)
chr3 (111-150)||(38806341-38806380)
chr3 (24-102)||(44522491-44522567)
chr3 (15-93)||(24064283-24064361)
chr3 (15-129)||(54086577-54086690)
chr3 (111-160)||(12095423-12095472)
chr3 (99-143)||(4235760-4235803)
chr3 (5-104)||(26105079-26105178)
chr3 (15-142)||(18356007-18356134)
chr3 (111-146)||(44276781-44276816)
chr3 (15-93)||(52805166-52805244)
chr3 (99-143)||(4226716-4226759)
[»] scaffold0054 (1 HSPs)
scaffold0054 (15-150)||(45456-45591)
[»] scaffold1770 (1 HSPs)
scaffold1770 (5-150)||(172-309)
[»] scaffold0062 (1 HSPs)
scaffold0062 (5-137)||(395-525)
[»] scaffold0056 (1 HSPs)
scaffold0056 (15-102)||(70874-70961)
[»] scaffold0257 (2 HSPs)
scaffold0257 (99-150)||(23469-23520)
scaffold0257 (111-159)||(23872-23920)
[»] scaffold0025 (1 HSPs)
scaffold0025 (15-86)||(65303-65375)
[»] scaffold0076 (1 HSPs)
scaffold0076 (20-101)||(15465-15551)


Alignment Details
Target: chr4 (Bit Score: 145; Significance: 3e-76; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 152 - 315
Target Start/End: Original strand, 29586398 - 29586566
Alignment:
Q  152 agtagtttaacaattgcttcaattaattttgcctagtttttagatatgaaaaaggtgctacataatcttgaattaac-----aattcaccacatatgtca 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     ||||||||||||||||||    
T  29586398 agtagtttaacaattgcttcaattaattttgcctagtttttagatatgaaaatggtgctacataatcttgaattaacataacaattcaccacatatgtca 29586497  T
Q  247 aaataattatgcaggtaatacttgtagctggctctgagccatcggctacaaccatggaatgggcactct 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29586498 aaataattatgcaggtaatacttgtagctggctctgagccatcggctacaaccatggaatgggcactct 29586566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 21310571 - 21310427
Alignment:
Q  6 agagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtt 105  Q
    |||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21310571 agagagaaaaaaaaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtt 21310472  T
Q  106 agtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  21310471 agtgcaatttctccaaaatggacatgtattttgaaacggagggag 21310427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 25704788 - 25704653
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25704788 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 25704689  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||    
T  25704688 tctccaaaatggacatgtattttgaaacggagggag 25704653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 24706377 - 24706522
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24706377 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 24706476  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  24706477 tagtgcaatttctccaaaatggacatgtattttgaaacggatggag 24706522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 40122615 - 40122760
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40122615 gagagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggttttttggt 40122714  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    || |||||||||||||||||||||||||||||||||||||||||||    
T  40122715 tactgcaatttctccaaaatggacatgtattttgaaacggagggag 40122760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 14261191 - 14261046
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14261191 gagagaaaaaaataaaatgaaataataaattattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttggt 14261092  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14261091 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 14261046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 12071698 - 12071563
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  12071698 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttattggttagtgcaatt 12071599  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||    
T  12071598 tctccaaaatggacatgtattttgaaacggagggag 12071563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 22321407 - 22321542
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22321407 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggttagtgcaatt 22321506  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||| ||||    
T  22321507 tctccaaaatggacatgtattttgaaacggaaggag 22321542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 21661665 - 21661810
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21661665 gagagaaaaaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataataaaatttatttggtttcttggt 21661764  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    || |||||||||||||||||||||||||||||||||| ||||||||    
T  21661765 tactgcaatttctccaaaatggacatgtattttgaaagggagggag 21661810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 21670429 - 21670574
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21670429 gagagaaaaaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataaaaaaatttatttggtttcttggt 21670528  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    || |||||||||||||||||||||||||||||||||| ||||||||    
T  21670529 tactgcaatttctccaaaatggacatgtattttgaaagggagggag 21670574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 34324722 - 34324858
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaattt-atttggtttcttggttagtgcaat 113  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  34324722 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttaatttagtttcttggttagtgcaat 34324821  T
Q  114 ttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||||||||||||||||||||||||||||||||    
T  34324822 ttctccaaaatggacatgtattttgaaacggagggag 34324858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 44568984 - 44568839
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  44568984 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggttttttggt 44568885  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  44568884 tagtgcaatttcttcaaaatggacatgtattttgaaacggaaggag 44568839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 50768011 - 50767871
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  50768011 gagagaaaaaaataaaatgaaataataaattattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttgat 50767912  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacgga 145  Q
    |||||||||||||| |||||| | |||||||||||||||||    
T  50767911 tagtgcaatttctctaaaatgaatatgtattttgaaacgga 50767871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 20249153 - 20249283
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| | |||||    
T  20249153 aatagaataaaataataaatggttaagggtattatagaaa-cacacacataatttcttcaaaaataacaaaatttatttggtttcttggttaatacaatt 20249251  T
Q  115 tctccaaaatggacatgtattttgaaacggag 146  Q
    | ||||||||||||||||||||||||||||||    
T  20249252 tatccaaaatggacatgtattttgaaacggag 20249283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 31892380 - 31892240
Alignment:
Q  6 agagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtt 105  Q
    |||||||| |||| |||||||||||||||||| || ||||||||||||||||||    || ||||||||||||||| |||||||||||| ||||||||||    
T  31892380 agagagaaaaatagaatgaaataataaatggtcaaaggtattatagaaaacaca----taatttcatcaaaaataataaaatttatttgatttcttggtt 31892285  T
Q  106 agtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    | ||||||||||  |||||| ||||||||||||| ||||||||||    
T  31892284 actgcaatttctttaaaatgaacatgtattttgatacggagggag 31892240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 1988151 - 1988065
Alignment:
Q  36 gttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 122  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| |||||| |||| |||||||||||||||    
T  1988151 gttaagggtattatagaaaacacatacataatttcatcaaaaataataaaatttatttgatttcttagttactgcaatttctccaaa 1988065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 20714488 - 20714577
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaa-cacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||| ||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  20714488 aatataatgaaataataaatggttaagg-tattatagaaaaacacacacatagtttcatcaaaaataacaaaatttatttgatttattggt 20714577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 32543617 - 32543532
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 101  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||| | | ||||||||||| |||||||| ||||||||||||||    
T  32543617 aataaaatgaaataataaatgattaagggtattata-aaaaaacacaaagaatttcatcaaaattaacaaaaattatttggtttctt 32543532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 146
Target Start/End: Original strand, 26676714 - 26676837
Alignment:
Q  23 gaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 122  Q
    |||||||||||||  |||||||||||||||||| ||||  | | |||||| |||||| |||| ||||||||| || ||||||  ||| ||||||| ||||    
T  26676714 gaaataataaatgagtaagggtattatagaaaaaacacgaagaatttcataaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaa 26676813  T
Q  123 atggacatgtattttgaaacggag 146  Q
    ||||| | ||||| ||||||||||    
T  26676814 atggataagtattgtgaaacggag 26676837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 6129093 - 6129175
Alignment:
Q  20 aatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 102  Q
    |||||||||||||||| ||||||||||| ||||||| | ||| | | ||| |||||||||||||||||||||||| |||||||    
T  6129093 aatgaaataataaatgattaagggtattgtagaaaaaatacaaagaattttatcaaaaataacaaaatttatttgatttcttg 6129175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 19692860 - 19692748
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||||||||||||||||  ||||| |||||||||||| ||||| | | |||||| |||||| |||| ||||||||| |||||||||  ||  ||||    
T  19692860 aatagaatgaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatt 19692761  T
Q  115 tctccaaaatgga 127  Q
    ||| |||||||||    
T  19692760 tcttcaaaatgga 19692748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 19703445 - 19703333
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||||||||||||||||  ||||| |||||||||||| ||||| | | |||||| |||||| |||| ||||||||| |||||||||  ||  ||||    
T  19703445 aatagaatgaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatt 19703346  T
Q  115 tctccaaaatgga 127  Q
    ||| |||||||||    
T  19703345 tcttcaaaatgga 19703333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 18507394 - 18507472
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaa 84  Q
    ||||||||| |||| ||||||||||||||| || |||| |||||||||||| ||||||| | ||||||||||||||||||    
T  18507394 gagagagaataatataatgaaataataaattgtcaagg-tattatagaaaaaacacacaaaatttcatcaaaaataacaa 18507472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 34284179 - 34284234
Alignment:
Q  37 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 92  Q
    ||||||||||||||||||| | ||| ||| ||||||||||| ||||||||||||||    
T  34284179 ttaagggtattatagaaaaaatacaaatagtttcatcaaaagtaacaaaatttatt 34284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 19361700 - 19361662
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtatttt 137  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  19361700 cttggttactgcaatttctccaaaatggacatgtatttt 19361662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 21064897 - 21064834
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaata 80  Q
    |||| ||||||||||||||| |||||| |||||||  |||| ||||||||| ||||||||||||||    
T  21064897 aatagaatgaaataataaatagttaagagtattat--aaaaaacacacataatttcatcaaaaata 21064834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 48652305 - 48652268
Alignment:
Q  67 tttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||||||||||||||||||||||||| |||||||||    
T  48652305 tttcatcaaaaataacaaaatttatttgatttcttggt 48652268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 51777755 - 51777715
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaa 55  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  51777755 aataacatgaaataataaatggttaagagtattatagaaaa 51777715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 145
Target Start/End: Original strand, 19362189 - 19362223
Alignment:
Q  111 aatttctccaaaatggacatgtattttgaaacgga 145  Q
    |||||||| ||||||||||||||||||||||||||    
T  19362189 aatttctctaaaatggacatgtattttgaaacgga 19362223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 4e-72; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 10981655 - 10981510
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10981655 gagagagaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 10981556  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10981555 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 10981510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 36453254 - 36453404
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36453254 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaaaacacacatattttcatcaaaaataataaaatttatttggtttcttggt 36453353  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggagcagta 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36453354 tagtgcaatttctccaaaatggacatgtattttgaaacggagggagcagta 36453404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 27813958 - 27813813
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27813958 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacatacatattttcatcaaaaataacaaaatttatttggtttcttggt 27813859  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  27813858 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 27813813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 40349107 - 40348962
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40349107 gagagagaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggt 40349008  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  40349007 tagtgcaatttctccaaaatggacatgtattttgaaacggaaggag 40348962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 47110586 - 47110453
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47110586 aataaaataaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttattttgtttcttggttagtgcaatt 47110489  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||| ||||||||    
T  47110488 tctccaaaatggacatgtattttgaaatggagggag 47110453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 25614483 - 25614626
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| |||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||| |||||    
T  25614483 gagagaaaaaaataaaatgaaataataaatgattaagggtatttcagaaaacac--acatattttcatcaaaaataacaaaatttatttggttttttggt 25614580  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  25614581 tagtgcaatttctccaaaatggacatgtattttgaaacggaaggag 25614626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 3091663 - 3091565
Alignment:
Q  6 agagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    ||||||||  ||| |||||||||||||||||||||||||||||||||||| ||||| | | |||||||||||||||||||||||||||| ||| |||||    
T  3091663 agagagaaatatagaatgaaataataaatggttaagggtattatagaaaaaacacaaagaatttcatcaaaaataacaaaatttatttgattttttggt 3091565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 16662234 - 16662146
Alignment:
Q  12 aagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 102  Q
    ||||||| ||| ||||||||||||||||||||||||||  |||| | ||||| |||||||||||||||||||||||||||||  |||||||    
T  16662234 aagaatataataaaataataaatggttaagggtattat--aaaaaaaacacaaattttcatcaaaaataacaaaatttattttatttcttg 16662146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 17636594 - 17636506
Alignment:
Q  12 aagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 102  Q
    ||||||| ||| ||||||||||||||||||||||||||  |||| | ||||| |||||||||||||||||||||||||||||  |||||||    
T  17636594 aagaatataataaaataataaatggttaagggtattat--aaaaaaaacacaaattttcatcaaaaataacaaaatttattttatttcttg 17636506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 27942179 - 27942256
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 92  Q
    |||| ||||||||||||||||||||| |||||||||||||| ||||||||| | |||| |||||||| ||||||||||    
T  27942179 aatagaatgaaataataaatggttaaaggtattatagaaaaaacacacataatctcattaaaaataaaaaaatttatt 27942256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 16360511 - 16360442
Alignment:
Q  23 gaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 94  Q
    ||||||||||||||||||||||||||||||||  | ||||| | ||||||||||||||||||||||||||||    
T  16360511 gaaataataaatggttaagggtattatagaaa--aaacacagaatttcatcaaaaataacaaaatttatttg 16360442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 25060133 - 25060184
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25060133 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggag 25060184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 37983289 - 37983179
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||||||||||||||||||||| ||||||||| |||||| | |     |||||||||||||||||||||||||||| ||||||| |  ||| ||||    
T  37983289 aatataatgaaataataaatggttaaaggtattataaaaaacataaaa----tttcatcaaaaataacaaaatttatttgatttcttgatatgtgtaatt 37983194  T
Q  115 tctccaaaatggaca 129  Q
    ||  |||||||||||    
T  37983193 tcctcaaaatggaca 37983179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 7743542 - 7743625
Alignment:
Q  20 aatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||||||||||||  |||| |||||||||||||  | ||||||| |||||||||||||||||||||||||||| | |||||||    
T  7743542 aatgaaataataaataattaacggtattatagaaagaa-acacataatttcatcaaaaataacaaaatttatttgatatcttggt 7743625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 2911548 - 2911599
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  2911548 cttggttactgcaatttctccaaaatggacatgtattttgaaatggagggag 2911599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 3498894 - 3498973
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 94  Q
    ||||||||||||||||||||||||||  ||||||||||||| | ||| | | |||||| ||||||||||||||| |||||    
T  3498894 aataaaatgaaataataaatggttaaaagtattatagaaaagatacaaaaaatttcataaaaaataacaaaattaatttg 3498973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 25059491 - 25059456
Alignment:
Q  111 aatttctccaaaatggacatgtattttgaaacggag 146  Q
    |||||||| |||||||||||||||||||||||||||    
T  25059491 aatttctctaaaatggacatgtattttgaaacggag 25059456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 46103597 - 46103629
Alignment:
Q  124 tggacatgtattttgaaacggagggagcagtag 156  Q
    ||||||||||||||||||||||||||| |||||    
T  46103597 tggacatgtattttgaaacggagggagtagtag 46103629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 1e-69; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 29260339 - 29260194
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29260339 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 29260240  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29260239 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 29260194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 1605716 - 1605581
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1605716 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 1605617  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||    
T  1605616 tctccaaaatggacatgtattttgaaacggagggag 1605581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 30734613 - 30734753
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30734613 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 30734712  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacgga 145  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30734713 tagtgcaatttctccaaaatggacatgtattttgaaacgga 30734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 8626629 - 8626484
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8626629 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 8626530  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    || |||||||||| ||||||||||||||||||||||||||||||||    
T  8626529 taatgcaatttcttcaaaatggacatgtattttgaaacggagggag 8626484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 13757345 - 13757214
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13757345 aataaaatgaaataataattgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgtaatt 13757246  T
Q  115 tctccaaaatggacatgtattttgaaacggag 146  Q
    ||||||||||||||||||||||||||||||||    
T  13757245 tctccaaaatggacatgtattttgaaacggag 13757214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 7761436 - 7761303
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7761436 aataaaatgaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttagtttcttggttagtgcaatt 7761339  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||    
T  7761338 tctccaaaatggacatgtattttgaaacggagggag 7761303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 15064834 - 15064969
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||    
T  15064834 aatataatcaaataataaatggttaagggtagtataaaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttggttgctgcaatt 15064933  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||| |||||||||||||||||||||||||||||||    
T  15064934 tctctaaaatggacatgtattttgaaacggagggag 15064969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 31559866 - 31559998
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    ||||||||| || |||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||    
T  31559866 gagagagaaaaaaaaaatgaaataataaatgattaagggtattacagaaaacatacacatattttcatcaaaaataacaaaatttatttgattttttggt 31559965  T
Q  105 tagtgcaatttctccaaaatggacatgtatttt 137  Q
    || ||||||||||||||||||||||||||||||    
T  31559966 taatgcaatttctccaaaatggacatgtatttt 31559998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 4129574 - 4129437
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        |||    
T  4129574 gagagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttattt--------ggt 4129483  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    || ||||||||||||||| |||| ||||||||||||||||||||||    
T  4129482 tactgcaatttctccaaagtggatatgtattttgaaacggagggag 4129437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 17942592 - 17942445
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaat--aacaaaatttatttggtttcttg 102  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||  || ||||  ||||||||||||||    
T  17942592 gagagaaaaaaataaaatgaaataataaatggttaagggtattatagagaacacgcacataatttcatcaaaaataaaaaaaaaaatatttggtttcttg 17942493  T
Q  103 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  17942492 gttactgcaatttctcaaaaatggacatgtattttgaaacgaagggag 17942445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 8235761 - 8235626
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| | |||| |||||||||||| ||||||| |||||||||||| |||||||    
T  8235761 aatagaatgaaataataaatgattaagggtattatagaaaacacacacataatatcataaaaaataacaaattttatttcgtttcttggttactgcaatt 8235662  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||| ||||||| ||||||||||| |||  |||||||    
T  8235661 tcttcaaaatgtacatgtattttaaaatagagggag 8235626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 30734771 - 30734879
Alignment:
Q  36 gttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatt 135  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||||||||||||| ||| || |||| |||||||||| |||||||||||||||||    
T  30734771 gttaagggtattatagaaaacacaca--taatttcatcaaaaataacaaaatttatttgatttttttgttactgcaatttcttcaaaatggacatgtatt 30734868  T
Q  136 ttgaaacggag 146  Q
    |||||||||||    
T  30734869 ttgaaacggag 30734879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 14287125 - 14287038
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgg 103  Q
    ||||||||||||||||||| || |||||||||||||||||| |  |||| | |||||| ||||||||||||||||||||| ||| ||||    
T  14287125 aataaaatgaaataataaaggggtaagggtattatagaaaa-aagcacagaatttcataaaaaataacaaaatttatttgatttattgg 14287038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 19996715 - 19996766
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  19996715 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggag 19996766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 3798233 - 3798151
Alignment:
Q  22 tgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    ||||||||||||||  ||||||| |||||||||| ||||| |||  ||||| ||||||||||||||||||||| ||| |||||    
T  3798233 tgaaataataaatgtgtaagggtgttatagaaaaaacacaaataacttcatgaaaaataacaaaatttatttgattttttggt 3798151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 21277574 - 21277659
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 101  Q
    |||| |||||| || |||||  ||||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||| ||||||    
T  21277574 aatagaatgaagtactaaataattaagggtattatagaaaa-acacataaattttcataaaaaataacaaaatttatttgatttctt 21277659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 11370630 - 11370711
Alignment:
Q  20 aatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 101  Q
    |||| ||||||||||||||||| |||||||| |||| |||||   | | |||||||||||||||||||||||||| ||||||    
T  11370630 aatggaataataaatggttaagagtattataaaaaaaacacaatgaatatcatcaaaaataacaaaatttatttgatttctt 11370711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 19996363 - 19996324
Alignment:
Q  111 aatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  19996363 aatttctctaaaatggacatgtattttgaaacggagggag 19996324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 26860902 - 26860819
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 102  Q
    |||| ||| |||||||||||||||||||||  ||||||| | ||||| |   ||||||||||||||| |||| ||||||| |||||||    
T  26860902 aatagaataaaataataaatggttaagggt--tatagaataaacacaaaa--tttcatcaaaaataaaaaaagttatttgatttcttg 26860819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 33845469 - 33845502
Alignment:
Q  61 acatattttcatcaaaaataacaaaatttatttg 94  Q
    ||||| ||||||||||||||||||||||||||||    
T  33845469 acataatttcatcaaaaataacaaaatttatttg 33845502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 1814741 - 1814645
Alignment:
Q  6 agagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 102  Q
    |||||||  |||| ||| |||||| |||  ||||||||  |||||| ||| ||||  | | ||||||||||||||||||| |||||||| |||||||    
T  1814741 agagagagaaatagaataaaataacaaaaagttaagggcgttataggaaaaacacgaagaatttcatcaaaaataacaaagtttatttgatttcttg 1814645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 15064733 - 15064697
Alignment:
Q  114 ttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  15064733 ttctccaaaatggacaagtattatgaaacggagggag 15064697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 17942682 - 17942718
Alignment:
Q  114 ttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  17942682 ttctccaaaatggacaagtattatgaaacggagggag 17942718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 1e-69; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 1102650 - 1102505
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1102650 gagagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 1102551  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    || |||||||||||||||||||||||||||||||||||||||||||    
T  1102550 tactgcaatttctccaaaatggacatgtattttgaaacggagggag 1102505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 23366936 - 23366791
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23366936 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggt 23366837  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  23366836 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 23366791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 39938317 - 39938172
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39938317 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 39938218  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  39938217 tagtgcaatttctccaaaatggtcatgtattttgaaacggagggag 39938172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 3519045 - 3518910
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3519045 aataaaatgaaataataaattattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 3518946  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||    
T  3518945 tctccaaaatggacatgtattttgaaacggagggag 3518910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 12969879 - 12970014
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||| |||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12969879 aatagaataaaataataaatggttaagggtattatagaaaatatacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 12969978  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||    
T  12969979 tctccaaaatggacatgtattttgaaacggagggag 12970014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 37673887 - 37674012
Alignment:
Q  25 aataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaat 124  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37673887 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaat 37673986  T
Q  125 ggacatgtattttgaaacggagggag 150  Q
    | ||||||||||||||||||||||||    
T  37673987 gaacatgtattttgaaacggagggag 37674012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 1646434 - 1646317
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||    
T  1646434 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttagtttcttggt 1646337  T
Q  105 tagtgcaatttctccaaaat 124  Q
    |  |||||||||||||||||    
T  1646336 tgctgcaatttctccaaaat 1646317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 22388275 - 22388335
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaa 75  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22388275 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaa 22388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 34224378 - 34224436
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagcagtagt 157  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34224378 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtagtagt 34224436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 35179090 - 35179164
Alignment:
Q  30 taaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    ||||| ||||||| |||||||||||| ||||||| | |||||||||||||||||||||||||||  |||||||||    
T  35179090 taaatagttaaggttattatagaaaaaacacacaaaatttcatcaaaaataacaaaatttatttcatttcttggt 35179164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 18078193 - 18078104
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||| |||||| ||||||||||| ||| |||||||||||||  |||| | |  ||||||||||||||||||||||||||| ||| |||||    
T  18078193 aatagaatgaattaataaatggtcaagagtattatagaaaatccacaaaaaaattcatcaaaaataacaaaatttatttgattttttggt 18078104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 19976468 - 19976380
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||| ||| ||||||||||| | |||||||||||||||||| | ||||||| ||| ||||||| || ||||||||||||| |||||||||    
T  19976468 aatataataaaataataaataggtaagggtattatagaaaaaa-acacataattttatcaaaagtaccaaaatttatttgatttcttggt 19976380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 14779914 - 14779838
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 93  Q
    |||| ||||||||||||||||  ||||  |||||||||||| ||||| ||| ||||||||||||||| |||||||||||    
T  14779914 aatataatgaaataataaatgagtaag--tattatagaaaaaacacaaataatttcatcaaaaataaaaaaatttattt 14779838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 32840312 - 32840401
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaa---acacacacatattttcatcaaaaataacaaaatttatttggtttctt 101  Q
    |||| ||||||||||||||| | ||| |||||||||||||   | | ||||| | |||||||||||||||||||||||||||| ||||||    
T  32840312 aatagaatgaaataataaatcgataatggtattatagaaagaaaaaaacacagaatttcatcaaaaataacaaaatttatttgatttctt 32840401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 39562037 - 39562104
Alignment:
Q  25 aataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 94  Q
    ||||||||||||||||||||||||  ||||| ||| | ||| |||| |||||||||||||||||||||||    
T  39562037 aataataaatggttaagggtatta--gaaaaaacaaaaataatttcttcaaaaataacaaaatttatttg 39562104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 1002922 - 1002997
Alignment:
Q  67 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaac 142  Q
    ||||||||||||||| |||||||||||| |||||| ||  ||| ||| ||  |||||  |||||||||||||||||    
T  1002922 tttcatcaaaaataataaaatttatttgatttcttagtatgtgtaatatcctcaaaagcgacatgtattttgaaac 1002997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 34242107 - 34242040
Alignment:
Q  20 aatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaattt 89  Q
    ||||||||||||||||| ||||||| ||| | |||| ||||| |   |||||||||||||||||||||||    
T  34242107 aatgaaataataaatgggtaagggtgttacaaaaaaaacacagaa--tttcatcaaaaataacaaaattt 34242040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 40756949 - 40756908
Alignment:
Q  114 ttctccaaaatggacatgtattttgaaacggagggagcagta 155  Q
    |||||||||||||||| ||||| |||||||||||||| ||||    
T  40756949 ttctccaaaatggacaagtattatgaaacggagggagtagta 40756908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 152
Target Start/End: Complemental strand, 5405024 - 5404996
Alignment:
Q  124 tggacatgtattttgaaacggagggagca 152  Q
    |||||||||||||||||||||||||||||    
T  5405024 tggacatgtattttgaaacggagggagca 5404996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 12969778 - 12969742
Alignment:
Q  114 ttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  12969778 ttctccaaaatggacaagtattatgaaacggagggag 12969742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 1e-69; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 23045409 - 23045554
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23045409 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 23045508  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  23045509 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 23045554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 284480 - 284335
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  284480 gagagagaaaagtaaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggt 284381  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  284380 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 284335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 40783787 - 40783932
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40783787 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggt 40783886  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  40783887 tagtgcaatttctccaaaatgaacatgtattttgaaacggagggag 40783932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 321763 - 321628
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  321763 aataaaatgaaataataaatgattaaggatattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 321664  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||| ||||||||||||||||||||||||    
T  321663 tctccaaaatgaacatgtattttgaaacggagggag 321628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 24772045 - 24772180
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24772045 aatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 24772144  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||| ||||||||||||||||||||||||||||||||    
T  24772145 tcttcaaaatggacatgtattttgaaacggagggag 24772180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 27211104 - 27211239
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  27211104 aatagaataaaataataaatggttaagggtattatagaaaacacacatataatttcctcaaaaataacaaaatttatttggtttcttggttattgcaatt 27211203  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||    
T  27211204 tctccaaaatggacatgtattttgaaacggagggag 27211239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 23526377 - 23526242
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  23526377 aatagaatgaaataataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttgattactgcaatt 23526278  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||| ||||||||||||||| ||| ||||    
T  23526277 tctccaaaatgaacatgtattttgaaatggaaggag 23526242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 47037982 - 47038130
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||| ||    
T  47037982 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttgatttcttagt 47038079  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggagcagta 155  Q
    |||| |||||||||||||||||||||||||||||||||||| |||| ||||    
T  47038080 tagtacaatttctccaaaatggacatgtattttgaaacggatggagtagta 47038130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 46771774 - 46771644
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||| |||||||    
T  46771774 aatagaatgaaaaaataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttaatttcttggttactgcaatt 46771675  T
Q  115 tctccaaaatggacatgtattttgaaacgga 145  Q
    |||||||||||||||||||||||||||||||    
T  46771674 tctccaaaatggacatgtattttgaaacgga 46771644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 33082882 - 33082765
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  33082882 aatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatt 33082783  T
Q  115 tctccaaaatggacatgt 132  Q
    |||||||||| |||||||    
T  33082782 tctccaaaatagacatgt 33082765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 52037262 - 52037382
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||  || ||| ||||||||||| |||||||||||||||| |||| || |||||||    
T  52037262 aatagaatgaaataataaatggttaagagtattatagaaaacacaca--taattttatcaaaaataataaaatttatttggttttttggataatgcaatt 52037359  T
Q  115 tctccaaaatggacatgtatttt 137  Q
    |||| ||||||||||||||||||    
T  52037360 tctctaaaatggacatgtatttt 52037382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 5 - 145
Target Start/End: Complemental strand, 1749454 - 1749314
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    ||||||||| |||| ||| ||||||||||||||||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| |    
T  1749454 gagagagaaaaatagaataaaataataaatggttaatgctattatagaaaacacacatataatttcatcaaaaataacaaaatttatttgatttcttgat 1749355  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacgga 145  Q
    || ||  |||| |   ||||||| ||||||||| |||||||    
T  1749354 tactgtgattttttttaaatggaaatgtattttaaaacgga 1749314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 1837978 - 1838053
Alignment:
Q  24 aaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 101  Q
    ||||||||||||| |||||||||||||||||| |||||  || |||||||||||||||||||||||||||| ||||||    
T  1837978 aaataataaatgggtaagggtattatagaaaaaacaca--taatttcatcaaaaataacaaaatttatttgatttctt 1838053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 51064893 - 51065031
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtatt---atagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgca 111  Q
    |||| |||||||||||||| |  ||||||||||   |||||||| ||||| | | ||||||||||||| |||| ||||||||| || ||||||  ||| |    
T  51064893 aatataatgaaataataaacgagtaagggtattattatagaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgta 51064992  T
Q  112 atttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||  |||||||||| ||||| ||||||||||||||    
T  51064993 atttctttaaaatggacaagtattgtgaaacggagggag 51065031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 3943113 - 3943062
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3943113 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggag 3943062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 7765147 - 7765072
Alignment:
Q  18 aaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 93  Q
    ||||| |||||||||||||||| ||||||||  ||||||||||| ||| ||||| |||||||||||||||||||||    
T  7765147 aaaattaaataataaatggttatgggtattacggaaaacacacatataatttcaccaaaaataacaaaatttattt 7765072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 9588723 - 9588672
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9588723 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggag 9588672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 31003926 - 31004012
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||| ||| |||||||||||||||||||||||||||||||| | ||||||| |||||| ||||||   |||||||||||| |||||||||    
T  31003926 aatagaattaaataataaatggttaagggtattatagaaaaaatacacatactttcattaaaaat---aaaatttatttgatttcttggt 31004012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 41959131 - 41959080
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41959131 cttggttattgcaatttctccaaaatggacatgtattttgaaacggagggag 41959080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 3657199 - 3657125
Alignment:
Q  30 taaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    ||||||||||||| |||||||||||| ||| ||| | |||||| ||||||||||||||||||||| |||||||||    
T  3657199 taaatggttaaggttattatagaaaaaacatacaaaatttcattaaaaataacaaaatttatttgatttcttggt 3657125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 150
Target Start/End: Original strand, 40261419 - 40261547
Alignment:
Q  23 gaaataataaatggttaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtg-caatttctcca 120  Q
    |||||||||||||||||| | |||||||||||| | |||||  | ||||||||||| |||||||||||||||| |||||||||  |||  ||||||| ||    
T  40261419 gaaataataaatggttaatgatattatagaaaaaaacacacgcaatttcatcaaaattaacaaaatttatttgatttcttggtatgtgtaaatttct-ca 40261517  T
Q  121 aaatggacatgtattttgaaacggagggag 150  Q
    |||   ||||||||| ||||||||||||||    
T  40261518 aaagcaacatgtattgtgaaacggagggag 40261547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 155
Target Start/End: Original strand, 13984991 - 13985047
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagcagta 155  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||    
T  13984991 cttggttactgcaatttctccaaaatggacatgtattttgaaacggatggagtagta 13985047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 18396832 - 18396754
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 93  Q
    |||| ||||||||||| |||||||||   ||||||||||||  |||||||| |||||| ||||||||||||||||||||    
T  18396832 aatagaatgaaataatgaatggttaaatatattatagaaaaaccacacataatttcataaaaaataacaaaatttattt 18396754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 52478103 - 52478016
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||| |||||||| ||||||  |||||| |||||||||||| ||||| |   |||||||||||||||||||||||||||| |||||||||    
T  52478103 aatagaatgaaatgataaatttttaaggttattatagaaaaaacacaaaa--tttcatcaaaaataacaaaatttatttgatttcttggt 52478016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 31061594 - 31061662
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaa 84  Q
    |||| |||||||||||||||||||| ||||||||| ||||| ||||||||| |||||| |||||||||||    
T  31061594 aatataatgaaataataaatggtta-gggtattatggaaaaaacacacataatttcataaaaaataacaa 31061662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 40562733 - 40562797
Alignment:
Q  27 taataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 92  Q
    |||||||||||||| |||||||||||||||||| | ||| ||| ||||||||||||||||||||||    
T  40562733 taataaatggttaatggtattatagaaaacacatatataattt-atcaaaaataacaaaatttatt 40562797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 44227889 - 44227850
Alignment:
Q  111 aatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44227889 aatttctccaaaatggacatgtattttgaaacggagggag 44227850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 27143151 - 27143239
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttg 102  Q
    |||| |||||||||||||||| |||||  |||||||||||| | | |||  | |||| ||||||||||||||||||||||| |||||||    
T  27143151 aatagaatgaaataataaatgattaagaatattatagaaaaaaactcacggaatttcctcaaaaataacaaaatttatttgatttcttg 27143239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 40564241 - 40564293
Alignment:
Q  86 atttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttg 138  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||| |||||||    
T  40564241 atttatttggtttcttggttactgcgatttttccaaaatggacatatattttg 40564293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 44228228 - 44228276
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagg 147  Q
    ||||||||  ||||||||||||||||||||||||||||||||| |||||    
T  44228228 cttggttacagcaatttctccaaaatggacatgtattttgaaatggagg 44228276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 3943763 - 3943802
Alignment:
Q  111 aatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  3943763 aatttctctaaaatggacatgtattttgaaacggagggag 3943802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 41959809 - 41959848
Alignment:
Q  111 aatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  41959809 aatttctctaaaatggacatgtattttgaaacggagggag 41959848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 9589631 - 9589670
Alignment:
Q  111 aatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  9589631 aatttctctaaaatagacatgtattttgaaacggagggag 9589670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 14351954 - 14351989
Alignment:
Q  69 tcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||||||||||||||||||||||| |||||||||    
T  14351954 tcatcaaaaataacaaaatttatttgttttcttggt 14351989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 24876699 - 24876633
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaa 84  Q
    |||| |||||||| ||||||||| || ||||||||||||||   ||||||| | ||||||||||||||||    
T  24876699 aatagaatgaaatgataaatggtcaaaggtattatagaaaa---acacataatatcatcaaaaataacaa 24876633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 34458863 - 34458950
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||| |||||||||||||||   ||||| |||||||||||  | ||||| | |||||| |||||||  |||||||||||| |||||||||    
T  34458863 aatagaatgaaataataaattagtaaggttattatagaaa--aaacacagaatttcataaaaaatagaaaaatttatttgatttcttggt 34458950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 1168414 - 1168369
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacgg 144  Q
    |||||||| |||||||||| |||||  |||||||||||||||||||    
T  1168414 cttggttactgcaatttcttcaaaaacgacatgtattttgaaacgg 1168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 37926945 - 37926900
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacac 60  Q
    ||||||||||| |||||||| || ||||||||||||||||| ||||    
T  37926945 aataaaatgaagtaataaattgtcaagggtattatagaaaaaacac 37926900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 6e-68; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 25773793 - 25773651
Alignment:
Q  8 agagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttag 107  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25773793 agagaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttag 25773694  T
Q  108 tgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25773693 tgcaatttctccaaaatggacatgtattttgaaacggagggag 25773651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 12806993 - 12807133
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12806993 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttaatgcaatt 12807092  T
Q  115 tctccaaaatggacatgtattttgaaacggagggagcagta 155  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  12807093 tctccaaaatggacatgtattttgaaacggagggagtagta 12807133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 30720622 - 30720767
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30720622 gagagaaaaaaataaaatgaaataatagatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 30720721  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  30720722 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 30720767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 10285187 - 10285332
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10285187 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttcttggt 10285286  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    || ||||||||||||||||| ||||| |||||||||||||||||||    
T  10285287 taatgcaatttctccaaaatagacatctattttgaaacggagggag 10285332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 36561229 - 36561374
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36561229 gagagaaaaaaataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgat 36561328  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    || |||||||| || |||||||||||||||||||||||||| ||||    
T  36561329 tactgcaatttttctaaaatggacatgtattttgaaacggatggag 36561374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 40886740 - 40886885
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||    
T  40886740 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaatacacacatattttcatcaaaaataacaaaatttattcgatttcttggt 40886839  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  40886840 tagtgcaatttctccaaaatgaacatgtattttgaaacggatggag 40886885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 37900764 - 37900899
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||| |||||||    
T  37900764 aatagaatgaaataataaatggttaagggtattatagaaaacacacatataatttcatcaaaaatatcaaaatttatttagtttcttggttactgcaatt 37900863  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||||||||  |||||||||||||||||||||    
T  37900864 tctccaaaatggatgtgtattttgaaacggagggag 37900899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 7277562 - 7277688
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| | |||||    
T  7277562 aatataatgaaataataaatggttaaaggtattatagaaaacacacacataatttgatcaaaaataacaaaatttatttggtttattggttactccaatt 7277661  T
Q  115 tctccaaaatggacatgtattttgaaa 141  Q
    |||||||||| ||||||||||||||||    
T  7277662 tctccaaaatagacatgtattttgaaa 7277688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 25683368 - 25683467
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  25683368 aatagaataaaataataaatggttaagggtattatagaaaacacacacataattttatcaaaaataacaaaatttatttggtttcttggttattgcaatt 25683467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 16983393 - 16983260
Alignment:
Q  18 aaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat--ttatttggtttcttggttagtgcaattt 115  Q
    ||||| ||||||||| |||||||||||||| ||||||| ||||| ||  |||||||||||| || ||||   ||||||||||||||||||| ||||||||    
T  16983393 aaaataaaataataa-tggttaagggtattgtagaaaaaacacatatcatttcatcaaaaaaaaaaaaaaaattatttggtttcttggttactgcaattt 16983295  T
Q  116 ctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||| |||||||    
T  16983294 ctccaaaatggacatgtattttgaaacagagggag 16983260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 23098386 - 23098461
Alignment:
Q  27 taataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 102  Q
    ||||||||||||||||||||||||| |||||  |||||| ||||||||||||||||||||||||||| ||||||||    
T  23098386 taataaatggttaagggtattataggaaacatgcacataatttcatcaaaaataacaaaatttatttagtttcttg 23098461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 734478 - 734611
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||||||||||||||||  |||||||||||||||||| ||||| | | ||||||||| ||| |||||||||||||| ||  |||||  | | ||||    
T  734478 aatagaatgaaataataaatgagtaagggtattatagaaaa-acacaaagaatttcatcaataatgacaaaatttatttgattctttggtatgagtaatt 734576  T
Q  115 tctccaaaatggacatgtattttgaaacggaggga 149  Q
    ||| ||||||||||| ||||| |||||||||||||    
T  734577 tcttcaaaatggacaagtattgtgaaacggaggga 734611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 30403101 - 30403191
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacaca-cacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    ||||||||||||||| ||||| ||||| ||||||||||||| | | |||| | ||||||||||||||||||||||||||||||||||||||    
T  30403101 aataaaatgaaataacaaatgattaagagtattatagaaaaaaaaacacagaatttcatcaaaaataacaaaatttatttggtttcttggt 30403191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 39071020 - 39070885
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacac-acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaat 113  Q
    |||| ||||||||||||||||  |||||||||||||||||| |||| ||| | ||||||||||||| |||| ||||||||| || |||  |  ||| |||    
T  39071020 aatagaatgaaataataaatgagtaagggtattatagaaaaaacacaacaga-tttcatcaaaaatgacaacatttatttgattccttaatatgtgtaat 39070922  T
Q  114 ttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||| ||||||| ||| ||||| ||||||||||||||    
T  39070921 ttcttcaaaatgaacaagtattgtgaaacggagggag 39070885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 147
Target Start/End: Complemental strand, 11319696 - 11319564
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||||||||||||||||  |||||||||||||||||| | ||| | | |||||| |||||| |||| ||||||||| ||  || ||  ||| ||||    
T  11319696 aatagaatgaaataataaatgagtaagggtattatagaaaaaaaacaaagaatttcataaaaaattacaacatttatttgattcattagtatgtgtaatt 11319597  T
Q  115 tctccaaaatggacatgtattttgaaacggagg 147  Q
    ||| |||||||||||  |||| |||||||||||    
T  11319596 tcttcaaaatggacaaatattgtgaaacggagg 11319564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 15305216 - 15305263
Alignment:
Q  103 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  15305216 gttactgcaatttctccaaaatggacatgtattttgaaacggagggag 15305263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 16054249 - 16054173
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 93  Q
    |||| ||| |||||||||||||| |||| |||||||||||  | ||||| | |||||| ||||||||||||||||||||    
T  16054249 aatagaataaaataataaatggtcaaggatattatagaaa--aaacacaaaatttcataaaaaataacaaaatttattt 16054173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 1056422 - 1056498
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 92  Q
    |||| |||||||||||||||| | ||  ||||||||||||| ||||| | | |||||| |||||||||||||||||||    
T  1056422 aatataatgaaataataaatgatcaatagtattatagaaaa-acacaaagaatttcattaaaaataacaaaatttatt 1056498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 15304863 - 15304824
Alignment:
Q  111 aatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  15304863 aatttctctaaaatggacatgtattttaaaacggagggag 15304824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 11796559 - 11796453
Alignment:
Q  44 tattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacg 143  Q
    |||||||||| | ||||| | | |||||||||||||||||||||| ||||  |||||||||   || ||||||| |||||  |||| ||| | ||||| |    
T  11796559 tattatagaacaaacacatagaatttcatcaaaaataacaaaattaatttaatttcttggtatctgtaatttcttcaaaaatgacaagtagtgtgaaaag 11796460  T
Q  144 gagggag 150  Q
    |||||||    
T  11796459 gagggag 11796453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 25683267 - 25683231
Alignment:
Q  114 ttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  25683267 ttctccaaaatggacaagtattatgaaacggagggag 25683231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 146
Target Start/End: Original strand, 29 - 170
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 128  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggag 146  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  129 tagtgcaatttctccaaaatggacatgtattttgaaacggag 170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 2e-67; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 11174353 - 11174498
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11174353 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 11174452  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  11174453 tagtgcaatttctccaaaatgaacatgtattttgaaacggagggag 11174498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 40058433 - 40058578
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40058433 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 40058532  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  40058533 tagtgcaatttctccgaaatggacatgtattttgaaacggagggag 40058578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 2540071 - 2540203
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2540071 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 2540170  T
Q  115 tctccaaaatggacatgtattttgaaacggagg 147  Q
    |||||||||||||||||||||||||||||||||    
T  2540171 tctccaaaatggacatgtattttgaaacggagg 2540203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 3585586 - 3585448
Alignment:
Q  17 taaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 116  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3585586 taaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 3585487  T
Q  117 tccaaaatggacatgtattttgaaacggagggagcagta 155  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  3585486 tccaaaatggacatgtattttgaaacggagggagtagta 3585448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 43275529 - 43275672
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  43275529 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttggtttcttggt 43275626  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  43275627 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 43275672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 11646467 - 11646600
Alignment:
Q  17 taaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 116  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11646467 taaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 11646566  T
Q  117 tccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||| ||||||    
T  11646567 tccaaaatggacatgtattttgaaacgaagggag 11646600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 37345718 - 37345573
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37345718 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcattaaaaataacaaaatttatttggtttcttggt 37345619  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||    
T  37345618 tggtgcaatttcttcaaaatggacatgtattttgaaacggagggag 37345573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 7147060 - 7146915
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7147060 gagagaaaaaaataaaatgaaataataaatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 7146961  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    || |||||||||| ||||||||||||||||||||||||||| ||||    
T  7146960 tactgcaatttcttcaaaatggacatgtattttgaaacggaaggag 7146915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 40918861 - 40919004
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||  | ||||||| |||||||||||||||||||||||||||||||    
T  40918861 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacaca--tgttttcataaaaaataacaaaatttatttggtttcttggt 40918958  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  40918959 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 40919004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 30999663 - 30999791
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    ||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30999663 aataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 30999760  T
Q  115 tctccaaaatggacatgtattttgaaacgga 145  Q
    |||||||||| ||||||||||||||||||||    
T  30999761 tctccaaaattgacatgtattttgaaacgga 30999791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 36068215 - 36068082
Alignment:
Q  17 taaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 116  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||| ||||| |    
T  36068215 taaaatgaaataattaatgattaagggtattatagaaaacacacatatattttcattaaaaataacaaaatttatttggttttttggttagtacaattcc 36068116  T
Q  117 tccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||    
T  36068115 tccaaaatggacatgtattttgaaacggagggag 36068082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 27035133 - 27034999
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||| |||| ||||||||||||||||||| |||||||    
T  27035133 aatagaatgaaataataaatggttaagggtattatagaaa-cacagacataatttcatcaaaaataaaaaaaattatttggtttcttggttactgcaatt 27035035  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||    
T  27035034 tctccaaaatggacatgtattttgaaacggagggag 27034999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 20546420 - 20546562
Alignment:
Q  6 agagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtt 105  Q
    ||||| || |||| ||||||||||||||| ||||||||||| ||| ||||||||||  || |||||||||||||||||||||||||||  ||||||| ||    
T  20546420 agagaaaaaaatataatgaaataataaattgttaagggtatcatataaaacacaca--taatttcatcaaaaataacaaaatttatttaatttcttgatt 20546517  T
Q  106 agtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
      |||||||||| |||||||||||| |||||||||| ||||||||    
T  20546518 gttgcaatttcttcaaaatggacatatattttgaaatggagggag 20546562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 28562554 - 28562426
Alignment:
Q  20 aatgaaataataaatggttaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctc 118  Q
    |||||||| |||||||  |||||||||||||||||| | |||| | | ||||||||||||| |||| ||||||||| || ||||||  ||| |||||||     
T  28562554 aatgaaatcataaatgagtaagggtattatagaaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttctt 28562455  T
Q  119 caaaatggacatgtattttgaaacggagg 147  Q
    ||||||||||| |||||||||||||||||    
T  28562454 caaaatggacaagtattttgaaacggagg 28562426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 28326797 - 28326883
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||| ||||||||||||||| |||||| ||||||| |||||   ||||||| |||||||||||||||||||||||||||| |||||||||    
T  28326797 aatagaatgaaataataaatagttaagagtattattgaaaa---acacataatttcatcaaaaataacaaaatttatttgatttcttggt 28326883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 13881094 - 13881174
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatag-aaaacacacacatattttcatcaaaaataacaaaatttatttg 94  Q
    |||| |||||||||||||||| ||||||||||||||| |||| || |||| | ||||||||||||||||||||||||||||    
T  13881094 aatataatgaaataataaatgattaagggtattatagaaaaaaacgcacacaatttcatcaaaaataacaaaatttatttg 13881174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 151
Target Start/End: Complemental strand, 35866751 - 35866615
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||| |||||||||||| ||||||||||||||||||| ||||| | | |||||| ||||||||||| |||||| |  |||||||||   |  ||||    
T  35866751 aatagaataaaataataaatgtttaagggtattatagaaaaaacacaaagaatttcatgaaaaataacaacatttatctaatttcttggtatatataatt 35866652  T
Q  115 tctccaaaatggacatgtattttgaaacggagggagc 151  Q
    |||  |||||||||| ||||| ||||||||| |||||    
T  35866651 tctttaaaatggacaagtattgtgaaacggaaggagc 35866615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 8697898 - 8697949
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8697898 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggag 8697949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 41307961 - 41308012
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41307961 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggag 41308012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 45278701 - 45278752
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45278701 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggag 45278752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 10646645 - 10646597
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagg 147  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10646645 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagg 10646597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 40486453 - 40486504
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  40486453 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggag 40486504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 37510403 - 37510314
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||||||||||| |||||| ||||||||||||| ||||| | | | | | ||| || |||||||||||||||||||| ||||||||||    
T  37510403 aataaaatgaaatattaaatgattaagggtattattgaaaaaatagaaagaattttattaaaaataacaaaatttatttagtttcttggt 37510314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 28568051 - 28567924
Alignment:
Q  20 aatgaaataataaatggttaagggtattatag-aaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctc 118  Q
    ||||||||||||||| |   |||||||||||| |||| ||||| | | |||||| |||||| |||| ||||||||| ||  |||||  ||| |||||||     
T  28568051 aatgaaataataaat-gagcagggtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttctt 28567953  T
Q  119 caaaatggacatgtattttgaaacggagg 147  Q
    ||||||||||| |||||||||||||||||    
T  28567952 caaaatggacaagtattttgaaacggagg 28567924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 28575644 - 28575517
Alignment:
Q  20 aatgaaataataaatggttaagggtattatag-aaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctc 118  Q
    ||||||||||||||| |   |||||||||||| |||| ||||| | | |||||| |||||| |||| ||||||||| ||  |||||  ||| |||||||     
T  28575644 aatgaaataataaat-gagcagggtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttctt 28575546  T
Q  119 caaaatggacatgtattttgaaacggagg 147  Q
    ||||||||||| |||||||||||||||||    
T  28575545 caaaatggacaagtattttgaaacggagg 28575517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 10181002 - 10181074
Alignment:
Q  20 aatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 93  Q
    ||||||||||||||||||||| ||||||||| |||| ||| || || ||| || ||||||||||||||||||||    
T  10181002 aatgaaataataaatggttaacggtattata-aaaaaacaaacgtaattttataaaaaataacaaaatttattt 10181074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 30906828 - 30906917
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacac--acatattttcatcaaaaataacaaaatttatttggtttcttg 102  Q
    |||| ||| ||||||||||||||||||| | | |||||||| | ||  ||| | |||||| ||||||||||||||||||||| |||||||    
T  30906828 aatagaattaaataataaatggttaaggttttcatagaaaaaaaactcacaaaatttcataaaaaataacaaaatttatttgatttcttg 30906917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 41305803 - 41305768
Alignment:
Q  111 aatttctccaaaatggacatgtattttgaaacggag 146  Q
    |||||||| |||||||||||||||||||||||||||    
T  41305803 aatttctctaaaatggacatgtattttgaaacggag 41305768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 27563999 - 27564075
Alignment:
Q  23 gaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 101  Q
    |||||||||||| ||||||||| ||||| |||| | ||||||| | |||| ||||||||||||| ||||||| ||||||    
T  27563999 gaaataataaattgttaagggtgttata-aaaaaaaacacataatctcat-aaaaataacaaaaattatttgatttctt 27564075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 40058341 - 40058296
Alignment:
Q  114 ttctccaaaatggacatgtattttgaaacggagggagcagtagttt 159  Q
    ||||| |||||||||| ||||| |||||||||||||| ||||||||    
T  40058341 ttctctaaaatggacaagtattatgaaacggagggagtagtagttt 40058296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 30268530 - 30268602
Alignment:
Q  20 aatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 92  Q
    ||||| ||||||||| ||||  |||||||||||||| | ||| ||| || || ||||| ||||||||||||||    
T  30268530 aatgagataataaatagttagcggtattatagaaaaaagacaaataattccaccaaaagtaacaaaatttatt 30268602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 152
Target Start/End: Complemental strand, 42587276 - 42587248
Alignment:
Q  124 tggacatgtattttgaaacggagggagca 152  Q
    |||||||||||||||||||||||||||||    
T  42587276 tggacatgtattttgaaacggagggagca 42587248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 45278053 - 45278021
Alignment:
Q  111 aatttctccaaaatggacatgtattttgaaacg 143  Q
    |||||||| ||||||||||||||||||||||||    
T  45278053 aatttctctaaaatggacatgtattttgaaacg 45278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 13364990 - 13364845
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13364990 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 13364891  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  13364890 tagtgcaatttctccaaaatgaacatgtattttgaaacggagggag 13364845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 199002 - 198857
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  199002 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggt 198903  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
     |||||||||||||||||||||||||||||||||||||||||||||    
T  198902 cagtgcaatttctccaaaatggacatgtattttgaaacggagggag 198857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 46694240 - 46694385
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  46694240 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgat 46694339  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  46694340 tagtgcaatttctccaaaaaggacatgtattttgaaacggagggag 46694385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 29375282 - 29375140
Alignment:
Q  8 agagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttag 107  Q
    |||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  29375282 agagaaaaaaaaaaagaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataagaaaatttatttggtttcttggttac 29375183  T
Q  108 tgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29375182 tgcaatttctccaaaatggacatgtattttgaaacggagggag 29375140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 3383223 - 3383078
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3383223 gagagaaaaaaataaaatgaaataataaatgtttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 3383124  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    || ||||||||||||||||||||||| |||||||||||||| ||||    
T  3383123 tactgcaatttctccaaaatggacatatattttgaaacggaaggag 3383078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 19241810 - 19241943
Alignment:
Q  17 taaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 116  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19241810 taaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttc 19241909  T
Q  117 tccaaaatggacatgtattttgaaacggagggag 150  Q
     |||||||||||||||||||||||||||||||||    
T  19241910 accaaaatggacatgtattttgaaacggagggag 19241943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 36881427 - 36881284
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||  |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  36881427 gagagaaaaaaataaaatgaaataataaataattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttggtttcttggt 36881330  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  36881329 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 36881284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 23088061 - 23088206
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23088061 gagagaaaaaaataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 23088160  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||| |||||| ||||| ||||||||||| |||||||    
T  23088161 tagtgcaatttcttcaaaatagacatatattttgaaacagagggag 23088206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 43750274 - 43750139
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | |||||    
T  43750274 aatagaatgaaataataaatggttaagtgtattatagaaaacacacatataatttcatcaaaaataacaaaatttatttggtttcttggttactccaatt 43750175  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||| ||||||    
T  43750174 tctccaaaatggacatgtattttgaaacgaagggag 43750139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 48 - 145
Target Start/End: Original strand, 32835129 - 32835226
Alignment:
Q  48 atagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacgga 145  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32835129 atagaaaacacacacataatttcatcaaaaataacaaaatttatttgttttcttggttattgcaatttctccaaaatggacatgtattttgaaacgga 32835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 13702890 - 13702771
Alignment:
Q  31 aaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacat 130  Q
    |||||||||| |||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | |||    
T  13702890 aaatggttaaaggtattatagaaaacaaacatataatttcatcaaaaatatcaaaatttatttggtttcttggttactgcaatttctccaaaataggcat 13702791  T
Q  131 gtattttgaaacggagggag 150  Q
    ||||||| ||| ||| ||||    
T  13702790 gtattttaaaatggatggag 13702771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 27707363 - 27707439
Alignment:
Q  74 aaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  27707363 aaaaataacaaaatttatttggtttcttggttactgcaatttctccaaaatggacatgtatttcgaaacggagggag 27707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 37781069 - 37780996
Alignment:
Q  20 aatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 93  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| | ||||||||||||||| |||||||||||    
T  37781069 aatgaaataataaatggttaatagtattatagaaaaaacacacagaatttcatcaaaaataataaaatttattt 37780996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 12094635 - 12094584
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12094635 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggag 12094584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 19897067 - 19897152
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttct 100  Q
    |||| |||||||||||||| |  |||||||||||||||||| ||||| | | |||||| ||||||||||||||||||||| |||||    
T  19897067 aatagaatgaaataataaaagagtaagggtattatagaaaaaacacaaagaatttcataaaaaataacaaaatttatttgatttct 19897152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 19911562 - 19911511
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  19911562 cttggttactgcaatttctccaaaatgaacatgtattttgaaacggagggag 19911511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 37293522 - 37293439
Alignment:
Q  67 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||||| |||| ||||||||| || ||||||  ||| ||||||| ||||||||||| ||||| ||||||||||||||    
T  37293522 tttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaaatggacaagtattgtgaaacggagggag 37293439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 44277455 - 44277506
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  44277455 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggag 44277506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 1455297 - 1455374
Alignment:
Q  24 aaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 101  Q
    |||||||||||||| ||| | ||||||||| | ||||| ||| ||| |||||||||||||||||||||||| ||||||    
T  1455297 aaataataaatggtgaagagaattatagaagaaacacaaataattttatcaaaaataacaaaatttatttgatttctt 1455374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 38805298 - 38805242
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagcagta 155  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||||||| ||||    
T  38805298 cttggttactgcaatttctctaaaatggacatgtattttaaaacggagggagtagta 38805242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 48820444 - 48820512
Alignment:
Q  67 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatt 135  Q
    |||||||||||||||||||||||||||||||| |||| ||  | ||||||||||||||  |||||||||    
T  48820444 tttcatcaaaaataacaaaatttatttggtttattggataccgtaatttctccaaaataaacatgtatt 48820512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 27707119 - 27707177
Alignment:
Q  6 agagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacat 64  Q
    ||||| || ||||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  27707119 agagaaaaaaataaaaagaaataataaatggttaaggatattatagaaaacacatacat 27707177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 53559750 - 53559880
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    ||||||||||||||||||| || ||||| |||  || | || ||||| | | |||||||||||||||||| ||||||||| ||||||| |  ||| ||||    
T  53559750 aataaaatgaaataataaacgggtaaggatatcgtaaataaaacacagagaatttcatcaaaaataacaacatttatttgttttcttgatatgtgtaatt 53559849  T
Q  115 tctccaaaatggacatgtattttgaaacgga 145  Q
    ||| |||||   ||| ||||| |||||||||    
T  53559850 tcttcaaaagcaacaagtattgtgaaacgga 53559880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 48963223 - 48963158
Alignment:
Q  83 aaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||| ||||||| ||| ||||||||  ||||||||||||||| || ||||||||||||||||||||||    
T  48963223 aaaaattatttgatttattggttag--caatttctccaaaatagatatgtattttgaaacggagggag 48963158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 19912174 - 19912213
Alignment:
Q  111 aatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  19912174 aatttctctaaaatggacatgtattttgaaacggagggag 19912213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 38806341 - 38806380
Alignment:
Q  111 aatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  38806341 aatttctctaaaatggacatgtattttgaaacggagggag 38806380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 44522567 - 44522491
Alignment:
Q  24 aaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 102  Q
    |||||||||||||||||  ||||||||||||  | ||||||  |||||| |||||||| |||||||||||| |||||||    
T  44522567 aaataataaatggttaaaagtattatagaaa--aaacacatgatttcataaaaaataataaaatttatttgatttcttg 44522491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 24064361 - 24064283
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 93  Q
    |||| ||| ||||||||||||| |||||||||||||||||| |||||   | ||| || ||| ||||||||||||||||    
T  24064361 aatagaataaaataataaatgggtaagggtattatagaaaaaacacagtgaattttataaaatataacaaaatttattt 24064283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 54086690 - 54086577
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||||||||||||| ||  |||||||||||||||||| | ||| | | ||||||||| ||| |||| ||||||||| || |||||   ||| ||||    
T  54086690 aatagaatgaaataataa-tgagtaagggtattatagaaaaaatacaaagaatttcatcaataatgacaacatttatttgattccttggcatgtgtaatt 54086592  T
Q  115 tctccaaaatggaca 129  Q
    ||| |||||||||||    
T  54086591 tcttcaaaatggaca 54086577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 12095423 - 12095472
Alignment:
Q  111 aatttctccaaaatggacatgtattttgaaacggagggagcagtagttta 160  Q
    |||||||| ||||||||||| ||||||||||||||||||| ||| |||||    
T  12095423 aatttctctaaaatggacatatattttgaaacggagggagtagttgttta 12095472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 4235803 - 4235760
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacg 143  Q
    |||||||||||||||||||||||||  ||||||||||||||||||    
T  4235803 cttggttagtgcaatttctccaaaa-cgacatgtattttgaaacg 4235760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 26105178 - 26105079
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattat-agaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgg 103  Q
    |||||| || |||| |||||||||||||||||||||||||||| | | |||||||| | | |   |||| ||||||||||||||||||||| ||| ||||    
T  26105178 gagagaaaaaaatataatgaaataataaatggttaagggtattgtaaaaaaacaca-aaaaaaaatcattaaaaataacaaaatttatttgatttattgg 26105080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 18356007 - 18356134
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| |||||||| |||||||  |||||||||||||||||| ||||| | | ||||| ||||| | |||| || |||||  || |||||   ||| ||||    
T  18356007 aatagaatgaaatgataaatgagtaagggtattatagaaaaaacacaaagaatttcaccaaaactgacaacatgtatttaattccttggcatgtgtaatt 18356106  T
Q  115 tctccaaaatggacatgtattttgaaac 142  Q
    | | ||||||||| ||||||| ||||||    
T  18356107 ttttcaaaatggatatgtattgtgaaac 18356134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 44276816 - 44276781
Alignment:
Q  111 aatttctccaaaatggacatgtattttgaaacggag 146  Q
    |||||||| |||||||||||||||||||||||||||    
T  44276816 aatttctctaaaatggacatgtattttgaaacggag 44276781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 52805166 - 52805244
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 93  Q
    |||| ||| ||||||||||||  |||| ||||||||||||| |  || | | ||||||||||||| |||||||||||||    
T  52805166 aatataataaaataataaatgtgtaagagtattatagaaaaaatgcaaacaatttcatcaaaaatgacaaaatttattt 52805244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 4226759 - 4226716
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacg 143  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||    
T  4226759 cttggttactgcaatttctccaaaa-cgacatgtattttgaaacg 4226716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 45591 - 45456
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 114  Q
    |||| ||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45591 aatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttggtgcaatt 45492  T
Q  115 tctccaaaatggacatgtattttgaaacggagggag 150  Q
    ||||||||||| ||||||||||||||||||||||||    
T  45491 tctccaaaatgaacatgtattttgaaacggagggag 45456  T

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Target: scaffold1770 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 309 - 172
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        |||    
T  309 gagagaaaaaaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttattt--------ggt 218  T
Q  105 tagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    || ||||||||||||||| |||| ||||||||||||||||||||||    
T  217 tactgcaatttctccaaagtggatatgtattttgaaacggagggag 172  T

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Target: scaffold0062 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 395 - 525
Alignment:
Q  5 gagagagaagaataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 104  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||| ||||||||||  || ||| |||||||||||||||||||||||| ||| ||| |    
T  395 gagagagaaaaatagaatgaaataataaatgattaagggtattataaaaaacacaca--taattttatcaaaaataacaaaatttatttgattttttgat 492  T
Q  105 tagtgcaatttctccaaaatggacatgtatttt 137  Q
    || ||||||||| |||||||| |||||||||||    
T  493 tactgcaatttcgccaaaatgaacatgtatttt 525  T

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Target: scaffold0056 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 70961 - 70874
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 102  Q
    |||| ||||||||||||||||||||||||| ||| |||||| ||||||| | |||||||||||||||||||||||||||| |||||||    
T  70961 aatagaatgaaataataaatggttaagggtgttacagaaaaaacacacagaatttcatcaaaaataacaaaatttatttgatttcttg 70874  T

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Target: scaffold0257 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 23520 - 23469
Alignment:
Q  99 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggag 150  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23520 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggag 23469  T

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Target: scaffold0257; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 23872 - 23920
Alignment:
Q  111 aatttctccaaaatggacatgtattttgaaacggagggagcagtagttt 159  Q
    |||||||| |||||||||||||||||||||||||| |||| | ||||||    
T  23872 aatttctctaaaatggacatgtattttgaaacggatggagtaatagttt 23920  T

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Target: scaffold0025 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 65303 - 65375
Alignment:
Q  15 aataaaatgaaataataaatggttaagggtattatag-aaaacacacacatattttcatcaaaaataacaaaa 86  Q
    |||| |||||||||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||| ||||    
T  65303 aatagaatgaaataataaatggttaagggtattatagaaaaaaacacatataatttcatcaaaaataataaaa 65375  T

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Target: scaffold0076 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 15465 - 15551
Alignment:
Q  20 aatgaaataataaatggttaagggtattataga------aaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 101  Q
    ||||||||||||||||||||||||||| |||||      ||| | ||| | |||||||||||||||||| ||||||||||| ||||||    
T  15465 aatgaaataataaatggttaagggtataatagaaagaagaaaaaaacatagattttcatcaaaaataac-aaatttatttgatttctt 15551  T

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