View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11520_low_2 (Length: 713)

Name: NF11520_low_2
Description: NF11520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11520_low_2
NF11520_low_2
[»] chr1 (45 HSPs)
chr1 (257-701)||(45294279-45294726)
chr1 (18-163)||(45294727-45294872)
chr1 (196-322)||(32007074-32007203)
chr1 (196-322)||(41808202-41808331)
chr1 (197-322)||(5055788-5055916)
chr1 (197-325)||(48660019-48660150)
chr1 (196-323)||(45813010-45813140)
chr1 (196-322)||(28455874-28456003)
chr1 (196-322)||(29994382-29994511)
chr1 (196-325)||(41761410-41761542)
chr1 (196-269)||(41039302-41039375)
chr1 (196-292)||(39276383-39276479)
chr1 (196-322)||(192415-192544)
chr1 (197-322)||(20748-20876)
chr1 (197-292)||(5943714-5943809)
chr1 (197-292)||(49783740-49783835)
chr1 (197-274)||(35110099-35110176)
chr1 (196-280)||(26032846-26032930)
chr1 (198-320)||(21938944-21939069)
chr1 (198-271)||(35945851-35945924)
chr1 (197-293)||(7059499-7059595)
chr1 (200-272)||(7275734-7275806)
chr1 (200-322)||(2088908-2089033)
chr1 (197-292)||(13109803-13109898)
chr1 (201-271)||(50106200-50106270)
chr1 (196-322)||(11688263-11688392)
chr1 (197-269)||(46447373-46447449)
chr1 (196-323)||(4065960-4066090)
chr1 (197-264)||(778635-778702)
chr1 (233-319)||(29587255-29587344)
chr1 (235-293)||(35224372-35224430)
chr1 (197-290)||(13097339-13097432)
chr1 (198-247)||(32982351-32982400)
chr1 (197-290)||(38817199-38817292)
chr1 (197-277)||(3716410-3716490)
chr1 (198-279)||(26264537-26264618)
chr1 (200-292)||(13183179-13183271)
chr1 (196-251)||(9886891-9886946)
chr1 (218-253)||(16770177-16770212)
chr1 (197-252)||(34305652-34305707)
chr1 (197-247)||(25931157-25931207)
chr1 (200-266)||(39284349-39284415)
chr1 (223-292)||(3716644-3716713)
chr1 (102-143)||(21915027-21915068)
chr1 (91-140)||(26325322-26325371)
[»] chr6 (28 HSPs)
chr6 (196-324)||(33621492-33621623)
chr6 (196-322)||(33704216-33704345)
chr6 (196-292)||(4464160-4464256)
chr6 (197-322)||(28322932-28323060)
chr6 (197-322)||(21000692-21000820)
chr6 (197-323)||(361010-361139)
chr6 (196-323)||(2959148-2959278)
chr6 (197-292)||(19145504-19145598)
chr6 (196-322)||(21037291-21037419)
chr6 (198-322)||(12252023-12252150)
chr6 (196-257)||(35218639-35218700)
chr6 (227-322)||(11572008-11572106)
chr6 (197-281)||(29009650-29009734)
chr6 (197-322)||(24619079-24619207)
chr6 (197-292)||(22576214-22576309)
chr6 (204-292)||(7613336-7613425)
chr6 (197-293)||(16518455-16518549)
chr6 (197-278)||(4610833-4610906)
chr6 (204-250)||(9454732-9454778)
chr6 (205-248)||(10999416-10999459)
chr6 (197-251)||(28592128-28592182)
chr6 (196-308)||(584783-584897)
chr6 (226-271)||(17590391-17590436)
chr6 (197-262)||(32289408-32289473)
chr6 (200-267)||(7014313-7014380)
chr6 (196-250)||(26567522-26567576)
chr6 (197-254)||(11456044-11456101)
chr6 (198-239)||(31963714-31963755)
[»] chr3 (41 HSPs)
chr3 (196-324)||(7824453-7824584)
chr3 (196-324)||(29689481-29689612)
chr3 (196-322)||(54151680-54151809)
chr3 (196-322)||(54158266-54158395)
chr3 (196-322)||(42392804-42392933)
chr3 (196-322)||(43247649-43247778)
chr3 (196-322)||(51665924-51666053)
chr3 (197-322)||(4601425-4601553)
chr3 (203-324)||(55018040-55018164)
chr3 (196-292)||(36228993-36229089)
chr3 (196-292)||(3112994-3113090)
chr3 (200-292)||(9349679-9349771)
chr3 (196-322)||(52500838-52500967)
chr3 (196-292)||(28844537-28844634)
chr3 (198-275)||(40756728-40756805)
chr3 (199-322)||(1778851-1778977)
chr3 (197-324)||(33334606-33334736)
chr3 (197-292)||(475281-475375)
chr3 (196-322)||(41377584-41377708)
chr3 (198-292)||(38257304-38257398)
chr3 (200-267)||(7958627-7958694)
chr3 (197-292)||(32001424-32001519)
chr3 (197-291)||(47635005-47635099)
chr3 (198-322)||(35461480-35461607)
chr3 (197-252)||(55320400-55320455)
chr3 (197-263)||(43775285-43775351)
chr3 (196-292)||(29750654-29750749)
chr3 (206-293)||(448884-448971)
chr3 (197-292)||(27230700-27230794)
chr3 (197-293)||(8137633-8137727)
chr3 (197-292)||(2590810-2590896)
chr3 (63-133)||(42669926-42669996)
chr3 (200-250)||(53182808-53182858)
chr3 (202-267)||(8151406-8151471)
chr3 (197-238)||(47770410-47770451)
chr3 (32-116)||(1167320-1167404)
chr3 (197-240)||(26511903-26511946)
chr3 (197-251)||(50729598-50729652)
chr3 (197-251)||(50783197-50783251)
chr3 (200-241)||(35716997-35717038)
chr3 (197-266)||(51054760-51054829)
[»] chr7 (50 HSPs)
chr7 (196-323)||(25546274-25546404)
chr7 (196-325)||(23358182-23358314)
chr7 (197-324)||(31770532-31770662)
chr7 (196-322)||(4106738-4106867)
chr7 (196-325)||(25112246-25112378)
chr7 (200-323)||(44083939-44084065)
chr7 (196-292)||(47570717-47570813)
chr7 (197-292)||(4107342-4107437)
chr7 (196-322)||(40058238-40058367)
chr7 (196-321)||(47250250-47250378)
chr7 (197-274)||(47557832-47557909)
chr7 (196-325)||(2146633-2146765)
chr7 (196-292)||(38781207-38781303)
chr7 (204-292)||(27229484-27229573)
chr7 (196-292)||(5587313-5587409)
chr7 (196-292)||(5592274-5592370)
chr7 (196-292)||(5772818-5772914)
chr7 (197-324)||(8439076-8439206)
chr7 (197-292)||(11355856-11355951)
chr7 (197-292)||(39513983-39514078)
chr7 (198-292)||(43753754-43753849)
chr7 (196-271)||(48146807-48146882)
chr7 (197-292)||(29484755-29484850)
chr7 (202-322)||(18506281-18506403)
chr7 (197-292)||(4001844-4001937)
chr7 (196-292)||(41183848-41183944)
chr7 (197-322)||(7162790-7162916)
chr7 (197-323)||(10220473-10220601)
chr7 (197-292)||(35309887-35309982)
chr7 (197-274)||(31288224-31288301)
chr7 (197-325)||(32606330-32606461)
chr7 (196-280)||(38033774-38033858)
chr7 (197-293)||(46427392-46427487)
chr7 (197-324)||(48444152-48444282)
chr7 (200-322)||(15634882-15635007)
chr7 (197-292)||(28603044-28603139)
chr7 (196-271)||(43203360-43203435)
chr7 (214-324)||(47960972-47961085)
chr7 (207-257)||(34763510-34763560)
chr7 (196-247)||(19630667-19630718)
chr7 (212-289)||(13887207-13887282)
chr7 (197-307)||(35577876-35577989)
chr7 (197-321)||(42081619-42081743)
chr7 (196-248)||(27915579-27915631)
chr7 (196-267)||(5462949-5463020)
chr7 (197-292)||(43170939-43171034)
chr7 (197-251)||(40657603-40657657)
chr7 (196-264)||(25872824-25872892)
chr7 (196-228)||(47960857-47960889)
chr7 (202-292)||(17753007-17753100)
[»] chr2 (43 HSPs)
chr2 (196-323)||(10639605-10639735)
chr2 (197-322)||(33083554-33083682)
chr2 (197-322)||(19048754-19048882)
chr2 (197-322)||(39831444-39831571)
chr2 (196-323)||(11459714-11459844)
chr2 (196-322)||(26605624-26605753)
chr2 (196-292)||(37197609-37197705)
chr2 (197-323)||(29659218-29659347)
chr2 (197-323)||(39535534-39535663)
chr2 (197-322)||(23839859-23839987)
chr2 (196-325)||(34460366-34460498)
chr2 (200-323)||(11708677-11708803)
chr2 (196-323)||(19537306-19537436)
chr2 (196-323)||(11816549-11816680)
chr2 (196-324)||(19816218-19816349)
chr2 (196-323)||(45125164-45125294)
chr2 (196-322)||(27137917-27138045)
chr2 (196-281)||(4851364-4851449)
chr2 (199-280)||(15782635-15782715)
chr2 (200-292)||(43684102-43684194)
chr2 (197-268)||(7275886-7275957)
chr2 (197-257)||(42578236-42578296)
chr2 (199-264)||(20497592-20497657)
chr2 (197-265)||(33001762-33001830)
chr2 (197-292)||(38440197-38440292)
chr2 (197-271)||(43778468-43778542)
chr2 (197-262)||(44181887-44181952)
chr2 (200-292)||(4800909-4801001)
chr2 (200-292)||(16654396-16654488)
chr2 (197-263)||(42025732-42025799)
chr2 (200-290)||(7349133-7349223)
chr2 (200-292)||(40786212-40786304)
chr2 (225-292)||(38400502-38400569)
chr2 (200-279)||(40825161-40825240)
chr2 (218-267)||(12366786-12366835)
chr2 (197-238)||(13106452-13106493)
chr2 (197-293)||(21312237-21312331)
chr2 (228-268)||(29726072-29726112)
chr2 (196-259)||(34234596-34234657)
chr2 (200-263)||(45201880-45201938)
chr2 (197-262)||(6055004-6055070)
chr2 (255-293)||(8311361-8311399)
chr2 (217-267)||(15072151-15072200)
[»] scaffold1348 (1 HSPs)
scaffold1348 (196-322)||(861-990)
[»] chr8 (42 HSPs)
chr8 (196-322)||(6602517-6602646)
chr8 (196-322)||(6677970-6678099)
chr8 (196-323)||(4530981-4531111)
chr8 (196-322)||(35779496-35779625)
chr8 (196-323)||(32333113-32333243)
chr8 (196-323)||(42192638-42192768)
chr8 (197-322)||(70523-70651)
chr8 (196-324)||(1339-1470)
chr8 (196-324)||(28817254-28817385)
chr8 (196-292)||(1078647-1078743)
chr8 (196-292)||(42885207-42885303)
chr8 (197-324)||(39303307-39303438)
chr8 (198-322)||(40911221-40911347)
chr8 (204-292)||(5385371-5385459)
chr8 (196-322)||(7792661-7792790)
chr8 (200-322)||(7813322-7813447)
chr8 (197-292)||(31969720-31969815)
chr8 (197-322)||(39435282-39435410)
chr8 (197-325)||(6099569-6099700)
chr8 (200-292)||(31532128-31532220)
chr8 (197-271)||(13891144-13891218)
chr8 (197-271)||(45264640-45264714)
chr8 (197-325)||(31695269-31695400)
chr8 (197-323)||(29425356-29425479)
chr8 (197-271)||(33731464-33731538)
chr8 (198-322)||(9292018-9292145)
chr8 (196-322)||(10963241-10963368)
chr8 (197-322)||(12534720-12534846)
chr8 (197-271)||(3822450-3822524)
chr8 (197-259)||(14400781-14400843)
chr8 (227-324)||(18386706-18386806)
chr8 (197-265)||(9775042-9775110)
chr8 (198-292)||(41849233-41849326)
chr8 (197-247)||(42364702-42364752)
chr8 (198-265)||(18752401-18752468)
chr8 (198-293)||(7403696-7403790)
chr8 (198-248)||(20269607-20269657)
chr8 (198-248)||(21056236-21056286)
chr8 (197-280)||(2907060-2907142)
chr8 (200-248)||(40932786-40932834)
chr8 (221-322)||(41753004-41753108)
chr8 (197-271)||(44124080-44124154)
[»] chr4 (54 HSPs)
chr4 (196-322)||(34739280-34739409)
chr4 (197-323)||(1173950-1174079)
chr4 (197-322)||(43139906-43140034)
chr4 (197-324)||(53457822-53457952)
chr4 (196-323)||(11277981-11278107)
chr4 (196-322)||(19849502-19849631)
chr4 (196-322)||(26424857-26424985)
chr4 (196-322)||(45874055-45874184)
chr4 (197-325)||(28798388-28798519)
chr4 (197-323)||(18257328-18257457)
chr4 (196-322)||(54768431-54768560)
chr4 (196-323)||(238457-238587)
chr4 (197-320)||(19225261-19225387)
chr4 (196-314)||(23417482-23417603)
chr4 (198-293)||(55214684-55214779)
chr4 (196-323)||(12735430-12735560)
chr4 (197-292)||(22608018-22608113)
chr4 (206-292)||(39807877-39807963)
chr4 (197-292)||(29581044-29581138)
chr4 (196-292)||(12867874-12867970)
chr4 (197-265)||(33770628-33770696)
chr4 (201-292)||(23710337-23710428)
chr4 (197-280)||(31015027-31015110)
chr4 (232-322)||(32441119-32441212)
chr4 (197-292)||(55400261-55400356)
chr4 (198-323)||(12767086-12767214)
chr4 (197-324)||(19673929-19674059)
chr4 (207-322)||(37134048-37134166)
chr4 (197-264)||(1966611-1966678)
chr4 (197-292)||(2075538-2075633)
chr4 (200-322)||(2864751-2864876)
chr4 (201-324)||(19814103-19814229)
chr4 (197-265)||(37620677-37620745)
chr4 (197-292)||(24417878-24417973)
chr4 (196-251)||(19119204-19119258)
chr4 (221-292)||(22910281-22910352)
chr4 (221-292)||(22968170-22968241)
chr4 (200-255)||(23532117-23532172)
chr4 (197-247)||(44369916-44369965)
chr4 (197-271)||(50033436-50033510)
chr4 (197-255)||(50347329-50347387)
chr4 (196-250)||(52171989-52172043)
chr4 (196-262)||(52768300-52768365)
chr4 (235-319)||(3465755-3465842)
chr4 (212-292)||(49030754-49030833)
chr4 (198-248)||(48822890-48822940)
chr4 (197-250)||(51287676-51287730)
chr4 (197-250)||(16555382-16555435)
chr4 (197-292)||(24517983-24518078)
chr4 (198-248)||(1125964-1126014)
chr4 (198-271)||(2804576-2804647)
chr4 (197-271)||(50035946-50036020)
chr4 (198-259)||(516457-516518)
chr4 (83-132)||(13184786-13184835)
[»] scaffold0119 (2 HSPs)
scaffold0119 (196-322)||(13950-14079)
scaffold0119 (196-322)||(19630-19759)
[»] chr5 (30 HSPs)
chr5 (196-322)||(13203957-13204086)
chr5 (196-322)||(21018223-21018352)
chr5 (196-292)||(31909384-31909480)
chr5 (200-325)||(1191543-1191671)
chr5 (196-323)||(35317696-35317826)
chr5 (196-321)||(4824938-4825066)
chr5 (196-271)||(29265929-29266004)
chr5 (200-292)||(17984745-17984837)
chr5 (196-322)||(12257356-12257485)
chr5 (197-271)||(2971038-2971112)
chr5 (206-323)||(27721430-27721550)
chr5 (200-293)||(6021024-6021117)
chr5 (196-257)||(32143413-32143474)
chr5 (197-318)||(8734000-8734125)
chr5 (221-322)||(9576985-9577089)
chr5 (197-323)||(11124651-11124780)
chr5 (197-292)||(28591350-28591445)
chr5 (200-325)||(40177621-40177749)
chr5 (196-264)||(21112110-21112178)
chr5 (197-292)||(35545966-35546061)
chr5 (197-263)||(23262606-23262672)
chr5 (197-258)||(2786338-2786398)
chr5 (197-238)||(4925673-4925714)
chr5 (198-250)||(3386894-3386946)
chr5 (197-247)||(19181789-19181838)
chr5 (91-140)||(8533813-8533862)
chr5 (197-257)||(17465147-17465205)
chr5 (200-264)||(41580078-41580142)
chr5 (197-280)||(14270569-14270652)
chr5 (196-253)||(28423241-28423298)
[»] scaffold0038 (1 HSPs)
scaffold0038 (197-322)||(114252-114380)
[»] scaffold0044 (1 HSPs)
scaffold0044 (196-322)||(9972-10101)
[»] scaffold0032 (1 HSPs)
scaffold0032 (196-322)||(56481-56610)
[»] scaffold0053 (1 HSPs)
scaffold0053 (197-292)||(22196-22291)
[»] scaffold0352 (1 HSPs)
scaffold0352 (197-266)||(8943-9012)
[»] scaffold0067 (1 HSPs)
scaffold0067 (196-318)||(34822-34948)
[»] scaffold0360 (2 HSPs)
scaffold0360 (198-292)||(14528-14632)
scaffold0360 (218-266)||(14726-14776)
[»] scaffold0178 (1 HSPs)
scaffold0178 (204-276)||(15141-15213)


Alignment Details
Target: chr1 (Bit Score: 352; Significance: 0; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 257 - 701
Target Start/End: Complemental strand, 45294726 - 45294279
Alignment:
Q  257 ttcgaacccgggtcatgatgtccggtcttgcaatttt---atttgctagttgagccaggacttctagacaaaggacatgttctttaacatgctttaacat 353  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||||||||||| || | ||||||||||||||||||||||    
T  45294726 ttcgaacccgggtcatgatgtccggtcttgcaatttcggcatttgctagttgagctaggacttctagacaaatgaaaggttctttaacatgctttaacat 45294627  T
Q  354 gtagaaaataacaagttttgtttttattgatatggcaaggataaaagaagtctttaccattttgtcacgctcttcaatctctttctttccagctttaact 453  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45294626 gtagaaaataactagttttgtttttattgatatggcaaggataaaagaaatctttaccattttgtcacgctcttcaatctctttctttccagctttaact 45294527  T
Q  454 tccaattcacaagcttccttccatctagctacttcttcttctgtctctttgatttcgatcaaaaactcctctaccttttacagttagacnnnnnnnnnnn 553  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||               
T  45294526 tccaattcacaagcttccttccatctagctacttcttcttctgtctctttgatttcaatcaaaaactcctctaccttttacagttagacaaaaaaagaaa 45294427  T
Q  554 nnngctagtgagaaagagaggttttgcaaaagagtgattgtcgcatttattgatcaaataggtgagtacattttgagctaagattctctctctatcttct 653  Q
       ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45294426 aaagctagtgagaaagagaggttttgcaaaagagtgattgtcacatttattgatcaaataggtgagtacattttgagctaagattctctctctatcttct 45294327  T
Q  654 aactccttgatgtagagtttgttttcggcaatctctttggtttgtttc 701  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  45294326 aactccttgatgtagagtttgttttctgcaatctctttggtttgtttc 45294279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 45294872 - 45294727
Alignment:
Q  18 aacatatcattctatcatgtaagcctatattatcaccgctttttaaaaataactgtcacatactcaattcttgttggatgtcgttgtaaaactagtttgc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45294872 aacatatcattctatcatgtaagcctatattatcaccgctttttaaaaataactgtcacatactcaattcttgttggatgtcgttgtaaaactagtttgc 45294773  T
Q  118 actgacaatgcatgtccctttttctcaactacaaaaatgtatataa 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  45294772 actgacaatgcatgtccctttttctcaactacaaaaatgtatataa 45294727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 32007203 - 32007074
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||       
T  32007203 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcgg 32007104  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  32007103 catttgccagttgagctaggacttctagac 32007074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 41808331 - 41808202
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||       
T  41808331 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgcaatttcgg 41808232  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  41808231 catttgccagttgagctaggacttctagac 41808202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 5055788 - 5055916
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||        
T  5055788 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 5055887  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||| || ||||| |||||||||||||    
T  5055888 atttgccagctgagctaggacttctagac 5055916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 48660150 - 48660019
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| | |||||| ||||||||||        
T  48660150 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcataacgtccggccttgcaatttcggc 48660051  T
Q  294 atttgctagttgagccaggacttctagacaaa 325  Q
    |||||| |||||||| ||||||||||||||||    
T  48660050 atttgccagttgagctaggacttctagacaaa 48660019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 45813010 - 45813140
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||       
T  45813010 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgatgtccgaccttgcaatttcgg 45813109  T
Q  293 tatttgctagttgagccaggacttctagaca 323  Q
     |||||  |||||||| ||||||||||||||    
T  45813110 catttgtcagttgagctaggacttctagaca 45813140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 28456003 - 28455874
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||       
T  28456003 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcgg 28455904  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  28455903 catttgccagttgagctaggacttctagac 28455874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 29994382 - 29994511
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| ||| || ||||||||||       
T  29994382 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtctcgggttcgaacccggatcatgacgtctggccttgcaatttcgg 29994481  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  29994482 catttgccagttgagctaggacttctagac 29994511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 196 - 325
Target Start/End: Original strand, 41761410 - 41761542
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||  | |||||| ||||||||||       
T  41761410 ggtcttggatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttgcaatttcgg 41761509  T
Q  293 tatttgctagttgagccaggacttctagacaaa 325  Q
     |||||| |||||| | ||||||||||||||||    
T  41761510 catttgccagttgaactaggacttctagacaaa 41761542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 41039302 - 41039375
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggt 269  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41039302 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggt 41039375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 39276479 - 39276383
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||| |||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||  | |||||| ||||||||||    
T  39276479 ggtcttaaatgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattt 39276383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 192544 - 192415
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt-- 293  Q
    |||||||||||||||||||| || |||||| |||||||||||||||||||||||||| |||||||||| ||| |||  | |||||| |||||||||||      
T  192544 ggtcttagatgaagtggtaatccgctgaaaataaactcacacacaactgtgaggtcctgggttcgaacacggatcacaacgtccggccttgcaattttag 192445  T
Q  294 -atttgctagttgagccaggacttctagac 322  Q
     |||||  |||||||| |||||||||||||    
T  192444 catttgtcagttgagctaggacttctagac 192415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 20876 - 20748
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| |  |||| | ||||||||||        
T  20876 gtcttagatgaagtggtaatccactaaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacggcgtcctgccttgcaatttcggc 20777  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||| |||||||  |||||||||||||    
T  20776 atttgccagttgagttaggacttctagac 20748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 5943809 - 5943714
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||| ||| ||| |||||||||||||||| ||||||||||||||| | |||||||||||||||| || |||||| ||||||||||    
T  5943809 gtcttagatgaagtgataatccattgaaattaaactcacaaacaactgtgaggtcctgagttcgaacccgggtcacgacgtccggccttgcaattt 5943714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 49783835 - 49783740
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||  |||||| || ||  ||||||||||    
T  49783835 gtcttagatgaagtggtaaaccactgaaattaaattcacatacaactgtgaggttccgggttcgaacccgaatcatgacgttcgaccttgcaattt 49783740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 197 - 274
Target Start/End: Original strand, 35110099 - 35110176
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatga 274  Q
    ||||||||||||||||||| || || ||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  35110099 gtcttagatgaagtggtaatcctctcaaattaaactcacacacaactgtaaggtcctgggttcgaacccgggtcatga 35110176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 196 - 280
Target Start/End: Complemental strand, 26032930 - 26032846
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccg 280  Q
    |||||||||||||| ||||| |||||||||||||||||||||| ||||||||||| || ||||||||||||||||| || |||||    
T  26032930 ggtcttagatgaagcggtaatccactgaaattaaactcacacaaaactgtgaggttccaggttcgaacccgggtcacgacgtccg 26032846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 198 - 320
Target Start/End: Complemental strand, 21939069 - 21938944
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---ta 294  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||| || |||||| |||| ||||||  ||||| ||| ||||||    |    
T  21939069 tcttagatgaagtggtaaaccgctgaaattaaactcgcacacaactgtgaggtcctggattcgaatccggatcatgacatccggccttacaatttcggca 21938970  T
Q  295 tttgctagttgagccaggacttctag 320  Q
    ||| | |||||||| |||||||||||    
T  21938969 tttaccagttgagctaggacttctag 21938944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 198 - 271
Target Start/End: Complemental strand, 35945924 - 35945851
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||||| |||||    
T  35945924 tcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggttccgggttcgaacccaggtca 35945851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 197 - 293
Target Start/End: Complemental strand, 7059595 - 7059499
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt 293  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| | | ||||||||||||||| || ||| |  |||||||||||    
T  7059595 gtcttagataaagtggtaatccacttaaattaaactcacacacaactgtgaggtctcagattcgaacccgggtcacgacgtctgaccttgcaatttt 7059499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 7275806 - 7275734
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcat 272  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||| ||| |||||    
T  7275806 ttagatgaagtggtaaaccactgaaattaaactcatacacaactgtgaagttccgggttcgaatccgagtcat 7275734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 200 - 322
Target Start/End: Original strand, 2088908 - 2089033
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tatt 296  Q
    |||||||||||||||| ||||||||||| |||||||| |||| |||||||| | | ||||||||||| |||| |||||| |  ||| ||||||   ||||    
T  2088908 ttagatgaagtggtaatccactgaaattgaactcacatacaattgtgaggttctgagttcgaacccgagtcacgatgtctgaccttacaatttcgatatt 2089007  T
Q  297 tgctagttgagccaggacttctagac 322  Q
    ||| |||||||| |||||||||||||    
T  2089008 tgccagttgagctaggacttctagac 2089033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 13109898 - 13109803
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |  ||||||||  ||||| | || |||||  ||||||||||    
T  13109898 gtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgaggttctaggttcgaattcgggttacgacgtccgaccttgcaattt 13109803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 50106200 - 50106270
Alignment:
Q  201 tagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    |||||||| ||| || ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  50106200 tagatgaaatggcaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtca 50106270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 11688392 - 11688263
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||| ||| |||| |  |||||||| ||||||  | || ||| ||||||||||       
T  11688392 ggtcttggatgaagtggtaatccactgaaaataaactcacacacaactctgaagtcctgaattcgaaccagggtcacaacgttcgggcttgcaatttcga 11688293  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
    ||||||  |||||||| |||||||||||||    
T  11688292 tatttgtcagttgagctaggacttctagac 11688263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 46447373 - 46447449
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaa----ttaaactcacacacaactgtgaggtcccgggttcgaacccgggt 269  Q
    ||||||||||| ||||||| |||||||||    ||||||||||||| ||||||||||||||||||||||||||||||    
T  46447373 gtcttagatgatgtggtaatccactgaaaataattaaactcacacataactgtgaggtcccgggttcgaacccgggt 46447449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 196 - 323
Target Start/End: Complemental strand, 4066090 - 4065960
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||| ||| ||||| | | ||||||||||| |||  | || | ||||||||||||       
T  4066090 ggtcttagatgaagtggtaattcactgaaattaaactcacatacaattgtaaggtctcagattcgaacccggatcacaacgttcagtcttgcaatttcgg 4065991  T
Q  293 tatttgctagttgagccaggacttctagaca 323  Q
    ||||||  |||||||| ||| ||||||||||    
T  4065990 tatttgtcagttgagctaggtcttctagaca 4065960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 778702 - 778635
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacc 264  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||| ||||||  ||||||||||    
T  778702 gtcttagatgaattggtaattcactgaaattaaactcacacacaactgtcaggtcctaggttcgaacc 778635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 319
Target Start/End: Complemental strand, 29587344 - 29587255
Alignment:
Q  233 cacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tatttgctagttgagccaggacttcta 319  Q
    ||||||||| ||||||||||||||||||||||| ||||| || |||||| ||||||||||    |||||| |||||||| ||||||||||    
T  29587344 cacacacaattgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttcggcatttgccagttgagctaggacttcta 29587255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 35224430 - 35224372
Alignment:
Q  235 cacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt 293  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||| |||||| ||||    
T  35224430 cacacaactgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgcattttt 35224372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 290
Target Start/End: Complemental strand, 13097432 - 13097339
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaat 290  Q
    ||||||||||||||||||| ||| | |||||||||||||| ||||||||||||| |  |||| ||| |||||||| || |||||  ||||||||    
T  13097432 gtcttagatgaagtggtaatccaataaaattaaactcacatacaactgtgaggttctaggtttgaatccgggtcacgacgtccgaccttgcaat 13097339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 32982351 - 32982400
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtga 247  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  32982351 tcttagatgaagtagtaaaccactgaaatcaaactcacacacaactgtga 32982400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 290
Target Start/End: Original strand, 38817199 - 38817292
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaat 290  Q
    ||||||||| || |||||||| | | |||||||| |||||||||| ||||||||| ||||||||||| ||| ||| || |||||||||| ||||    
T  38817199 gtcttagataaaatggtaaacaattaaaattaaattcacacacaattgtgaggtctcgggttcgaactcggatcacgacgtccggtctttcaat 38817292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 3716490 - 3716410
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgt 277  Q
    |||| ||||||||||  || ||||| ||| ||||||||||||||||||||||||| | ||||||||| || ||||||||||    
T  3716490 gtctaagatgaagtgacaatccactaaaaataaactcacacacaactgtgaggtctcaggttcgaactcgagtcatgatgt 3716410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 198 - 279
Target Start/End: Original strand, 26264537 - 26264618
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtcc 279  Q
    |||||||||||||| |||  || ||||||||||||||||||||||||||||||  | |||||||| | ||| ||||| ||||    
T  26264537 tcttagatgaagtgataatacattgaaattaaactcacacacaactgtgaggtttcaggttcgaatctgggacatgacgtcc 26264618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 292
Target Start/End: Original strand, 13183179 - 13183271
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||| |||| |  ||||| ||| ||| | | ||||||||  ||||||||||    
T  13183179 ttagatgaagtggtaattcactgaaattaaactcacatacaactgtaaggttctaggttcaaactcggattacgatgtccgaccttgcaattt 13183271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 9886891 - 9886946
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtc 251  Q
    ||||||||||||||||||||  || ||| |||||||||||||| |||||| |||||    
T  9886891 ggtcttagatgaagtggtaattcagtgatattaaactcacacataactgttaggtc 9886946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 253
Target Start/End: Original strand, 16770177 - 16770212
Alignment:
Q  218 cactgaaattaaactcacacacaactgtgaggtccc 253  Q
    |||||||| |||||||||||||||||||||||||||    
T  16770177 cactgaaaataaactcacacacaactgtgaggtccc 16770212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 34305652 - 34305707
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcc 252  Q
    |||||| |||||||||||| ||| |||||||||||| ||| |||||||||| ||||    
T  34305652 gtcttaaatgaagtggtaatccaatgaaattaaacttacaaacaactgtgaagtcc 34305707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 25931157 - 25931207
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtga 247  Q
    |||| |||||||||||||| | | ||||||||||||||||||||| |||||    
T  25931157 gtctcagatgaagtggtaatctattgaaattaaactcacacacaattgtga 25931207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 200 - 266
Target Start/End: Complemental strand, 39284415 - 39284349
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccg 266  Q
    ||||||||| | |||| ||||  |||||||||||||| ||||||||||||||   ||||||||||||    
T  39284415 ttagatgaaatagtaatccacaaaaattaaactcacatacaactgtgaggtcttaggttcgaacccg 39284349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 3716713 - 3716644
Alignment:
Q  223 aaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||||||||||| | | |||  || |||| |||||| || ||| ||||||||||    
T  3716713 aaattaaactcacacacaactgtgaggttctgagtttaaatccggatcatgacgttcggccttgcaattt 3716644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 21915027 - 21915068
Alignment:
Q  102 tgtaaaactagtttgcactgacaatgcatgtccctttttctc 143  Q
    |||||||||||||| |||||||||||||| |||| |||||||    
T  21915027 tgtaaaactagtttacactgacaatgcatatccccttttctc 21915068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 26325322 - 26325371
Alignment:
Q  91 ttggatgtcgttgtaaaactagtttgcactgacaatgcatgtcccttttt 140  Q
    |||| ||||| |||||||||||||| ||| |||||||||| |||||||||    
T  26325322 ttggttgtcggtgtaaaactagtttacaccgacaatgcatatcccttttt 26325371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 7e-48; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 196 - 324
Target Start/End: Complemental strand, 33621623 - 33621492
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||       
T  33621623 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcgg 33621524  T
Q  293 tatttgctagttgagccaggacttctagacaa 324  Q
     |||||| |||||||| |||||||||||||||    
T  33621523 catttgccagttgagctaggacttctagacaa 33621492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 33704345 - 33704216
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||       
T  33704345 ggtcttaaatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcgg 33704246  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  33704245 catttgccagttgagctaggacttctagac 33704216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 4464256 - 4464160
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| ||||||||||    
T  4464256 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccaggttcgaacccggatcatgacgtccggccttgcaattt 4464160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 28323060 - 28322932
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||| |||||| ||| ||||||        
T  28323060 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttcggc 28322961  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||| |||||||| |||||||||||||    
T  28322960 atttgccagttgagctaggacttctagac 28322932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 21000820 - 21000692
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    |||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||| || ||| ||||||||||        
T  21000820 gtctcagatgaagtggtaaaccactgaaattaaacccacacacaattgtgaggtcccgggttcgaacccaggtcatgacgtacggccttgcaatttcggc 21000721  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||| |||||||| |||||||||||||    
T  21000720 atttgccagttgagctaggacttctagac 21000692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 197 - 323
Target Start/End: Complemental strand, 361139 - 361010
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt--- 293  Q
    ||||||||||||||| ||| |||||||||||||||||||| | ||||||||||| ||||||||||||||| |||| ||||| ||| |||||||||||       
T  361139 gtcttagatgaagtgttaatccactgaaattaaactcacatataactgtgaggttccgggttcgaacccgtgtcacgatgttcggccttgcaattttggc 361040  T
Q  294 atttgctagttgagccaggacttctagaca 323  Q
    |||||| || ||||| | ||||||||||||    
T  361039 atttgccagatgagctaagacttctagaca 361010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 196 - 323
Target Start/End: Complemental strand, 2959278 - 2959148
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    ||||| |||||||||||||  |||| |||||||||||||||||||||||||||||| ||||||||||||   |||| ||| ||||| ||||||||||       
T  2959278 ggtctaagatgaagtggtattccacggaaattaaactcacacacaactgtgaggtctcgggttcgaacctaagtcacgatatccggccttgcaatttcgg 2959179  T
Q  293 tatttgctagttgagccaggacttctagaca 323  Q
     ||||||||||||||  ||||||||||||||    
T  2959178 catttgctagttgagttaggacttctagaca 2959148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 19145598 - 19145504
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| ||  ||||||| || |||||| ||||||||||    
T  19145598 gtcttagatgaagtggtaatccactgaaattaaattcacacacaattgtgaggtcccgggttc-aaaacgggtcacgacgtccggccttgcaattt 19145504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 21037419 - 21037291
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||||| |||| |||||||||| ||||  | |||||| ||||||||||       
T  21037419 ggtcttagatgaagtggtaattcactgaaaataaactcacacacaactgtgaggt-ccggattcgaacccgagtcacaacgtccggccttgcaatttcag 21037321  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| || ||||||||||    
T  21037320 catttgccagttgagctagaacttctagac 21037291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 198 - 322
Target Start/End: Complemental strand, 12252150 - 12252023
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---ta 294  Q
    ||||| |||||||||||| ||| | ||||||||||||||||||||| ||||||| ||||||| ||||| ||||| ||  |||||||||||||| |   ||    
T  12252150 tcttaaatgaagtggtaagccattaaaattaaactcacacacaactatgaggtctcgggttcaaaccctggtcacgacatccggtcttgcaatctcggta 12252051  T
Q  295 tttgctagttgagccaggacttctagac 322  Q
    ||||  |||||||| |||||||||||||    
T  12252050 tttgtcagttgagctaggacttctagac 12252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 35218639 - 35218700
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggt 257  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  35218639 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggt 35218700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 11572106 - 11572008
Alignment:
Q  227 taaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tatttgctagttgagccaggacttctagac 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||| || ||| ||||||    ||||| ||||||||| |||||||||||||    
T  11572106 taaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtctggccttacaatttctgcatttgttagttgagctaggacttctagac 11572008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 29009650 - 29009734
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccgg 281  Q
    |||||||||||||||||||  |||| ||| ||||||||||||||||||||||||||| ||||||||  |||||||||| ||||||    
T  29009650 gtcttagatgaagtggtaattcactaaaaataaactcacacacaactgtgaggtcccaggttcgaattcgggtcatgacgtccgg 29009734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 24619079 - 24619207
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt--- 293  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| | ||||||| |||| |||||| ||||||| || || ||| ||| |||||||       
T  24619079 gtcttagatgaagtggtaatcgactgaaattaaactcacacacaattatgaggtcacgggatcgaactcgggtcacgacgttcggccttacaattttgac 24619178  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||  |||||||  |||||||||||||    
T  24619179 atttgtcagttgagttaggacttctagac 24619207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 22576309 - 22576214
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||| ||||||||||  || |||||| ||||||||||| ||||||||||| ||||||||||| | |||||| ||||| || |||| ||||||    
T  22576309 gtcttagaagaagtggtaatacaatgaaatcaaactcacacataactgtgaggttccgggttcgaatctgggtcacgatgttcgatctttcaattt 22576214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 204 - 292
Target Start/End: Complemental strand, 7613425 - 7613336
Alignment:
Q  204 atgaagtggtaaaccactgaaattaaactcacacacaac-tgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||| ||||||||||||||||| ||| | | ||||||||| | |||||||||| | |||| ||| ||||||||||||||||    
T  7613425 atgaagtggtaaatcactgaaattaaactcatacatatcttgtgaggtctcaggttcgaacctgagtcacgatatccggtcttgcaattt 7613336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 293
Target Start/End: Complemental strand, 16518549 - 16518455
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt 293  Q
    |||||||||||| |||||| ||||||||| ||||||||  |||||||||||| ||| |||||||||||| |||||  | |||||  |||||||||||    
T  16518549 gtcttagatgaaatggtaatccactgaaaataaactca--cacaactgtgagctcctgggttcgaacccaggtcacaacgtccgaccttgcaatttt 16518455  T

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Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 197 - 278
Target Start/End: Original strand, 4610833 - 4610906
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtc 278  Q
    |||||| ||||||||||||||||||||| |        ||||||||||||||||||| ||||||||||||||||||||||||    
T  4610833 gtcttaaatgaagtggtaaaccactgaact--------cacacaactgtgaggtcccaggttcgaacccgggtcatgatgtc 4610906  T

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Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 9454732 - 9454778
Alignment:
Q  204 atgaagtggtaaaccactgaaattaaactcacacacaactgtgaggt 250  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||    
T  9454732 atgaagtggtaaaccactgaaattaaactcacatataactgtgaggt 9454778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 205 - 248
Target Start/End: Original strand, 10999416 - 10999459
Alignment:
Q  205 tgaagtggtaaaccactgaaattaaactcacacacaactgtgag 248  Q
    ||||||||||| |||||||||||||||||||| |||||||||||    
T  10999416 tgaagtggtaatccactgaaattaaactcacatacaactgtgag 10999459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 28592128 - 28592182
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtc 251  Q
    ||||||||| || |||||| ||| ||||| |||||||||||||||||||||||||    
T  28592128 gtcttagataaattggtaatccattgaaaataaactcacacacaactgtgaggtc 28592182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 308
Target Start/End: Original strand, 584783 - 584897
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    ||||||| ||||||||| || || ||||||| ||||||||| | || ||||||||||||  |||||| |||||||| || |||| | ||||||||||       
T  584783 ggtcttatatgaagtggcaatcctctgaaatcaaactcacataaaattgtgaggtcccgaattcgaatccgggtcacgacgtcc-gccttgcaatttcgg 584881  T
Q  293 tatttgctagttgagc 308  Q
     |||||||||||||||    
T  584882 catttgctagttgagc 584897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 17590391 - 17590436
Alignment:
Q  226 ttaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||    
T  17590391 ttaaactcacacacaactgtgaggctccgggttcgaacccgagtca 17590436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 262
Target Start/End: Complemental strand, 32289473 - 32289408
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaa 262  Q
    ||||| |||||||||||||  |||||| | |||||| |||||||||||||||||| || |||||||    
T  32289473 gtctttgatgaagtggtaattcactgataataaacttacacacaactgtgaggtctcgagttcgaa 32289408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 267
Target Start/End: Original strand, 7014313 - 7014380
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgg 267  Q
    ||||||||||||||||  ||||||||||||||||||| | || | ||||||  |||||||||| ||||    
T  7014313 ttagatgaagtggtaatacactgaaattaaactcacataaaattatgaggtttcgggttcgaatccgg 7014380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 26567522 - 26567576
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggt 250  Q
    |||||| || |||||||||||||||||||| |||| |||||| ||| ||||||||    
T  26567522 ggtcttggaagaagtggtaaaccactgaaactaaattcacacgcaattgtgaggt 26567576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 11456101 - 11456044
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccg 254  Q
    ||||||||||||||||||| | |||  || ||||||||||||||| | ||||||||||    
T  11456101 gtcttagatgaagtggtaatcgactagaaataaactcacacacaattatgaggtcccg 11456044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 31963714 - 31963755
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacac 239  Q
    ||||| ||||||||| |||||||| |||||||||||||||||    
T  31963714 tcttaaatgaagtggaaaaccacttaaattaaactcacacac 31963755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 4e-43; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 196 - 324
Target Start/End: Original strand, 7824453 - 7824584
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||       
T  7824453 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcgg 7824552  T
Q  293 tatttgctagttgagccaggacttctagacaa 324  Q
     |||||| |||||||| |||||||||||||||    
T  7824553 catttgccagttgagctaggacttctagacaa 7824584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 196 - 324
Target Start/End: Original strand, 29689481 - 29689612
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||       
T  29689481 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcgg 29689580  T
Q  293 tatttgctagttgagccaggacttctagacaa 324  Q
     |||||| |||||||| |||||||||||||||    
T  29689581 catttgccagttgagctaggacttctagacaa 29689612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 54151680 - 54151809
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||       
T  54151680 ggtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcgg 54151779  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  54151780 catttgccagttgagctaggacttctagac 54151809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 54158395 - 54158266
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||       
T  54158395 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaatttcgg 54158296  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  54158295 catttgccagttgagctaggacttctagac 54158266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 42392804 - 42392933
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| |||||  ||||||||||       
T  42392804 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtcccgggttcgagcccggatcatgacgtccgaccttgcaatttcgg 42392903  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  42392904 catttgccagttgagctaggacttctagac 42392933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 43247649 - 43247778
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt-- 293  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  | |||||| |||||||||||      
T  43247649 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcacaacgtccggccttgcaattttgg 43247748  T
Q  294 -atttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  43247749 catttgccagttgagctaggacttctagac 43247778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 51665924 - 51666053
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||| |||||| ||||||||||       
T  51665924 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccaggtcatgacgtccggccttgcaatttcgg 51666023  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  51666024 catttgccagttgagctaggacttctagac 51666053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 4601553 - 4601425
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    |||||||||||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||        
T  4601553 gtcttagatgaactggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 4601454  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||| |||||||| |||||||||||||    
T  4601453 atttgccagttgagctaggacttctagac 4601425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 203 - 324
Target Start/End: Original strand, 55018040 - 55018164
Alignment:
Q  203 gatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt---atttgc 299  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||   ||||||    
T  55018040 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattttgacatttgc 55018139  T
Q  300 tagttgagccaggacttctagacaa 324  Q
     |||||||  |||||||||||||||    
T  55018140 cagttgagttaggacttctagacaa 55018164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 36228993 - 36229089
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||    
T  36228993 ggtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaattt 36229089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 3112994 - 3113090
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||||| | || |||||| ||||||||||    
T  3112994 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggttacgacgtccggccttgcaattt 3113090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 200 - 292
Target Start/End: Original strand, 9349679 - 9349771
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||  ||||||||||    
T  9349679 ttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccgaccttgcaattt 9349771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 52500967 - 52500838
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||||||||||  | ||||||||||||| |||||| |||||| ||| ||||||       
T  52500967 ggtcttagatgaagtggtaatctactgaaaataaactcacacacaactgtgaggtttcaggttcgaacccggatcatgacgtccggccttacaatttcga 52500868  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  52500867 catttgccagttgagctaggacttctagac 52500838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 28844634 - 28844537
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaat-taaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||||||||||| || |||||||||||||||||  | |||||| ||||||||||    
T  28844634 ggtcttagatgaagtggtaatccactgaaaaataaactcacacacaactgtgaggttccaggttcgaacccgggtcacaacgtccggccttgcaattt 28844537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 198 - 275
Target Start/End: Original strand, 40756728 - 40756805
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgat 275  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||| |||| |||||||    
T  40756728 tcttagatgaagtggtaaactactgaaattaaactcacacgcaactgtgaggtctcgggttcgaatccggatcatgat 40756805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 199 - 322
Target Start/End: Complemental strand, 1778977 - 1778851
Alignment:
Q  199 cttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tat 295  Q
    ||||||||||||||||| ||| ||||| |||| ||| |||||| |||||||| ||||||||||||||||||||  |||||||| ||||||||||    ||    
T  1778977 cttagatgaagtggtaatccattgaaaataaattcaaacacaattgtgaggttccgggttcgaacccgggtcacaatgtccggccttgcaatttcggcat 1778878  T
Q  296 ttgctagttgagccaggacttctagac 322  Q
    |||  |||||||| |||||||||||||    
T  1778877 ttgtcagttgagctaggacttctagac 1778851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 197 - 324
Target Start/End: Complemental strand, 33334736 - 33334606
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    |||||| |||||||| ||| | ||||||||||||||||||||||||||||||||||||| ||||||| | |||||  | ||||||  |||||||||        
T  33334736 gtcttatatgaagtgataatctactgaaattaaactcacacacaactgtgaggtcccggattcgaactcaggtcacaacgtccggctttgcaatttcggc 33334637  T
Q  294 atttgctagttgagccaggacttctagacaa 324  Q
    |||||| |||||||| |||||||||||||||    
T  33334636 atttgcaagttgagctaggacttctagacaa 33334606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 475281 - 475375
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||||||||| ||| |||||||||||| |||||| |||||  ||||||||||    
T  475281 gtcttagatgaagtggtaattcactgaa-ttaaactcacacacaactgtgaggttccgagttcgaacccggatcatgacgtccgaccttgcaattt 475375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 41377708 - 41377584
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt-- 293  Q
    |||||||||||||||||||| || |||||| ||||||||||||     ||||||||||||||||||||| || |||||| |||||| ||| |||||||      
T  41377708 ggtcttagatgaagtggtaatccgctgaaaataaactcacaca-----gtgaggtcccgggttcgaacctggatcatgacgtccggccttacaattttgg 41377614  T
Q  294 -atttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  41377613 catttgccagttgagctaggacttctagac 41377584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 198 - 292
Target Start/End: Original strand, 38257304 - 38257398
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||| || |||||||||||||||||||||| |||||||| | |||||||||||| ||||| || |||||  ||||||||||    
T  38257304 tcttagatgaagtggtaatccgctgaaattaaactcacacacaattgtgaggttctgggttcgaacccaggtcacgacgtccgaccttgcaattt 38257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 7958694 - 7958627
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgg 267  Q
    |||||||||||||||| ||||| ||| |||||| ||||| ||||||||||||||||||||||||||||    
T  7958694 ttagatgaagtggtaatccactaaaaataaacttacacataactgtgaggtcccgggttcgaacccgg 7958627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 32001424 - 32001519
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||| || || ||||||||| || ||| ||||| ||| ||| ||||||    
T  32001424 gtcttatatgaagtggtaaatcactgaaaataaactcacacacaactgtgagatctcgagttcgaacctggttcaagatgttcggccttacaattt 32001519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 197 - 291
Target Start/End: Original strand, 47635005 - 47635099
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatt 291  Q
    ||||||||||||||||||| | |||||||||||||| ||||| ||||| ||||||| || ||||||||| |||||  |||||||  |||||||||    
T  47635005 gtcttagatgaagtggtaatcaactgaaattaaacttacacataactgcgaggtcctggattcgaacccaggtcacaatgtccgaccttgcaatt 47635099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 198 - 322
Target Start/End: Original strand, 35461480 - 35461607
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---ta 294  Q
    ||||||||||| || ||| | || |||| |||||||||||||||||||||||| |||||||||||||||| |||  | |||||  ||||||||||    |    
T  35461480 tcttagatgaaatgataatctacagaaaataaactcacacacaactgtgaggttccgggttcgaacccggatcacaacgtccgaccttgcaatttcggca 35461579  T
Q  295 tttgctagttgagccaggacttctagac 322  Q
    ||||| |||||||| || ||||||||||    
T  35461580 tttgccagttgagctagaacttctagac 35461607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 55320400 - 55320455
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcc 252  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||    
T  55320400 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactatgaggtcc 55320455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 43775351 - 43775285
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaac 263  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||||||||| | |||| |||||||    
T  43775351 gtcttagatgaagtggtaatccactgaaattaaactcaaatacaactgtgagattccggattcgaac 43775285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 29750749 - 29750654
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||| |||||| |||| ||||||| ||||| ||||||||| |  ||||||| |||||||| || |||| | ||||||||||    
T  29750749 ggtcttagatgaagtggtaatccactg-aatttaactcacgcacaaatgtgaggtctctagttcgaatccgggtcacgacgtccagccttgcaattt 29750654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 293
Target Start/End: Original strand, 448884 - 448971
Alignment:
Q  206 gaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt 293  Q
    |||||||||| ||||| |||||||||||||| |||||||||||||||  ||||||||  ||| ||| || |||||| ||| |||||||    
T  448884 gaagtggtaatccactaaaattaaactcacaaacaactgtgaggtcctaggttcgaattcggatcacgacgtccggccttacaatttt 448971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 27230794 - 27230700
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||| ||||||||||||||  ||||||||||||| ||||||||||||||||  ||||| ||| ||| || ||||| |||||| || ||||||||||    
T  27230794 gtctgagatgaagtggtaattcactgaaattaaattcacacacaactgtga-atcccgagtttgaatccaggtcacgatgtctggccttgcaattt 27230700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 197 - 293
Target Start/End: Original strand, 8137633 - 8137727
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt 293  Q
    ||||||||| ||||||||| ||| ||||||||||||  ||||||||||||||||  | | ||| ||| |||||||||| |||||  |||||||||||    
T  8137633 gtcttagataaagtggtaagccattgaaattaaact--cacacaactgtgaggtttcagattcaaactcgggtcatgacgtccgaccttgcaatttt 8137727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 2590810 - 2590896
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||||||| ||||||||||||||||||         ||||||||| |||||||||||| | ||| ||||| ||| ||||||||||    
T  2590810 gtcttagatgaagtggtaatccactgaaattaaactca---------gtgaggtccagggttcgaacccagatcacgatgttcggccttgcaattt 2590896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 42669926 - 42669996
Alignment:
Q  63 aaaataactgtcacatactcaattcttgttggatgtcgttgtaaaactagtttgcactgacaatgcatgtc 133  Q
    ||||||||||||| ||||||||||| | |||||||||  |||||||||||||| || || || ||||||||    
T  42669926 aaaataactgtcaaatactcaattcatattggatgtcaatgtaaaactagtttacagtggcagtgcatgtc 42669996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 53182858 - 53182808
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggt 250  Q
    ||||||||||||||||||| || |||||||||||||||| || ||||||||    
T  53182858 ttagatgaagtggtaaacccctaaaattaaactcacacataattgtgaggt 53182808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 8151471 - 8151406
Alignment:
Q  202 agatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgg 267  Q
    |||||||  ||||| ||| |||||||||||| ||||| ||||||||| || |||||||||||||||    
T  8151471 agatgaaccggtaatccattgaaattaaactgacacataactgtgagatctcgggttcgaacccgg 8151406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 47770451 - 47770410
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacaca 238  Q
    ||||||||||||||| ||||||| ||||||||||||||||||    
T  47770451 gtcttagatgaagtgataaaccattgaaattaaactcacaca 47770410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 1167404 - 1167320
Alignment:
Q  32 tcatgtaagcctatattatcaccgctttttaaaaataactgtcacatactcaattcttgttggatgtcgttgtaaaactagtttg 116  Q
    ||||||| | |||| |||| |||||||||| ||||||||| ||| || ||| |||||| ||| |||||  |||||||||||||||    
T  1167404 tcatgtatgtctattttataaccgctttttgaaaataactatcaaatgctccattcttattgtatgtcagtgtaaaactagtttg 1167320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 26511946 - 26511903
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacaca 240  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||    
T  26511946 gtcttagatgaagtattaaaccacttaaattaaactcacacaca 26511903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 50729652 - 50729598
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtc 251  Q
    ||||||||||||||||||| | | |||||||||||||||| | ||||| ||||||    
T  50729652 gtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtc 50729598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 50783197 - 50783251
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtc 251  Q
    ||||||||||||||||||| | | |||||||||||||||| | ||||| ||||||    
T  50783197 gtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtc 50783251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 35717038 - 35716997
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaa 241  Q
    ||||||||||||||||| || | |||||||||||||||||||    
T  35717038 ttagatgaagtggtaaatcattaaaattaaactcacacacaa 35716997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 51054829 - 51054760
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccg 266  Q
    ||||||||||||||||||| ||||| |||||||||| ||| |||| | ||||||   | |||||||||||    
T  51054829 gtcttagatgaagtggtaatccacttaaattaaacttacaaacaattatgaggttttgagttcgaacccg 51054760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 2e-42; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 25546274 - 25546404
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||       
T  25546274 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccggccttgcaatttcgg 25546373  T
Q  293 tatttgctagttgagccaggacttctagaca 323  Q
     |||| | |||||||| ||||||||||||||    
T  25546374 catttaccagttgagctaggacttctagaca 25546404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 196 - 325
Target Start/End: Complemental strand, 23358314 - 23358182
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | || |||||| ||||||||||       
T  23358314 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggttacgacgtccggccttgcaatttcgg 23358215  T
Q  293 tatttgctagttgagccaggacttctagacaaa 325  Q
    ||||||| |||||||| ||||||||||||||||    
T  23358214 tatttgccagttgagctaggacttctagacaaa 23358182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 197 - 324
Target Start/End: Original strand, 31770532 - 31770662
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||        
T  31770532 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacatccggccttgcaatttcggc 31770631  T
Q  294 atttgctagttgagccaggacttctagacaa 324  Q
    |||||| |||||||| |||||||||||||||    
T  31770632 atttgccagttgagctaggacttctagacaa 31770662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 4106867 - 4106738
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||       
T  4106867 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcgg 4106768  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| ||||| || |||||||||||||    
T  4106767 catttgccagttgggctaggacttctagac 4106738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 196 - 325
Target Start/End: Original strand, 25112246 - 25112378
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||||       
T  25112246 ggtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccgaccttgcaatttcgg 25112345  T
Q  293 tatttgctagttgagccaggacttctagacaaa 325  Q
    ||||||| |||||||| ||||||||||||||||    
T  25112346 tatttgccagttgagctaggacttctagacaaa 25112378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 200 - 323
Target Start/End: Complemental strand, 44084065 - 44083939
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt---att 296  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  | |||||| |||||||||||   |||    
T  44084065 ttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggcatt 44083966  T
Q  297 tgctagttgagccaggacttctagaca 323  Q
    ||| |||||||| ||||||||||||||    
T  44083965 tgccagttgagctaggacttctagaca 44083939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 47570717 - 47570813
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||    
T  47570717 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggccttgcaattt 47570813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 4107437 - 4107342
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  4107437 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcgtgacgtccggccttgcaattt 4107342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 40058367 - 40058238
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt-- 293  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||  | |||||| |||||||||||      
T  40058367 ggtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttgg 40058268  T
Q  294 -atttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||  |||||||||||||    
T  40058267 catttgccagttgagttaggacttctagac 40058238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 196 - 321
Target Start/End: Original strand, 47250250 - 47250378
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||  ||| |||| |||||||||||||||||||| |||||| ||||||||||       
T  47250250 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactaagagatcccaggttcgaacccgggtcatgacgtccggccttgcaatttcgg 47250349  T
Q  293 tatttgctagttgagccaggacttctaga 321  Q
     |||||| |||||||| ||||||||||||    
T  47250350 catttgccagttgagctaggacttctaga 47250378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 197 - 274
Target Start/End: Complemental strand, 47557909 - 47557832
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatga 274  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  47557909 gtcttagatgaagtggtaaaccactgaaattaaactcacatacaactgtgaggttccgggttcgaacccgggtcatga 47557832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 196 - 325
Target Start/End: Complemental strand, 2146765 - 2146633
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||  ||||||||||||||||||  | |||||| ||||||||||       
T  2146765 ggtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcttgggttcgaacccgggtcacaacgtccggccttgcaatttcgg 2146666  T
Q  293 tatttgctagttgagccaggacttctagacaaa 325  Q
     |||| | |||||||| ||||||||||||||||    
T  2146665 cattttccagttgagctaggacttctagacaaa 2146633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 38781207 - 38781303
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||  | ||| ||||||||||    
T  38781207 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacgacattcggccttgcaattt 38781303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 204 - 292
Target Start/End: Original strand, 27229484 - 27229573
Alignment:
Q  204 atgaagtggtaaaccactgaaattaaa-ctcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| || |||||| ||||||||||    
T  27229484 atgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaattt 27229573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 5587409 - 5587313
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||| ||||| |||||||||||||||  || |||||||||| |||||||||||||| ||| ||||||||| ||||||||||    
T  5587409 ggtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgcaattt 5587313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 5592370 - 5592274
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||| ||||| |||||||||||||||  || |||||||||| |||||||||||||| ||| ||||||||| ||||||||||    
T  5592370 ggtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgcaattt 5592274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 5772818 - 5772914
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||   ||||||  ||||||||||    
T  5772818 ggtcttaaatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtttcgagttcgaacccgggtcacattgtccgaccttgcaattt 5772914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 197 - 324
Target Start/End: Complemental strand, 8439206 - 8439076
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt--- 293  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||| ||||||||| ||||||||  | |||||  |||||||||||       
T  8439206 gtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcctgggttcgaatccgggtcacaacgtccgaccttgcaattttggc 8439107  T
Q  294 atttgctagttgagccaggacttctagacaa 324  Q
    |||||| |||||| | |||||||||| ||||    
T  8439106 atttgccagttgaactaggacttctaaacaa 8439076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 11355951 - 11355856
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || | |||| | |||||  ||||||||||    
T  11355951 gtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgagatcccgggttcgaatccagatcataacgtccgaccttgcaattt 11355856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 39513983 - 39514078
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||| |||||||||||||| |||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||| || |||||| ||||||||||    
T  39513983 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtaaggtcccgggttcgaactcgggtcacgacgtccggccttgcaattt 39514078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 198 - 292
Target Start/End: Original strand, 43753754 - 43753849
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaa-ctcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||| |||||||||||||| |||||| ||||||||||||| |||||||||||||| ||||| || |||||| ||||||||||    
T  43753754 tcttagatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccggccttgcaattt 43753849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 48146882 - 48146807
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    |||||||||||||||||||| ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  48146882 ggtcttagatgaagtggtaatccaatgaaaattaactcacacacaactgtgaggtcccgggttcgaacccgggtca 48146807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 29484755 - 29484850
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||| |||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||| ||||| | |||||| |||||| ||||||||||    
T  29484755 gtcttatatgaagtgataatccactgaaattaaactcacatacaattgtgaggtcccgggttcaaacccagatcatgacgtccggccttgcaattt 29484850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 202 - 322
Target Start/End: Original strand, 18506281 - 18506403
Alignment:
Q  202 agatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt---atttg 298  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| ||| ||||||| ||||  |||||||||||   ||||     
T  18506281 agatgaagcggtaaaccactgaaattaaactcacacac-actgtgaagtctcgggttcgaactcggatcatgatatccgaccttgcaattttaacatttt 18506379  T
Q  299 ctagttgagccaggacttctagac 322  Q
     |||||| || |||||||||||||    
T  18506380 ttagttgtgctaggacttctagac 18506403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 4001844 - 4001937
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||||||||||| ||||||||||||  |||||| ||| ||||||||| |||||||||||||||| ||  ||||| ||||||||||    
T  4001844 gtcttagatgaagtggtaaaccattgaaattaaact--cacacagctgagaggtcccgagttcgaacccgggtcacgacatccggccttgcaattt 4001937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 41183944 - 41183848
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||| ||| ||||||||| |||||||||||| |||||||||||   |||||||||||| ||||| || |||||| ||||||||||    
T  41183944 ggtcttagatgaagtgataatccactgaaaataaactcacacataactgtgaggtattgggttcgaacccaggtcaagacgtccggccttgcaattt 41183848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 7162790 - 7162916
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||| ||||||||| ||||||  ||||||| |||||||||||| ||||||||||||||||  | |||||| ||| ||||||        
T  7162790 gtcttagatgaagtggtaatccactgaaaataaact--cacacaattgtgaggtcccgagttcgaacccgggtcacaacgtccggccttacaatttcggc 7162887  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||| |||||||| ||||||| |||||    
T  7162888 atttgccagttgagctaggacttttagac 7162916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 197 - 323
Target Start/End: Original strand, 10220473 - 10220601
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt--- 293  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||  ||| ||||||||| | |||||| |||| | ||| |||||||       
T  10220473 gtcttagatgaa-tggtaaaccactgaaattaaactcacacaaaactgtgaggtttcggattcgaacccagatcatgacgtcctgccttacaattttggc 10220571  T
Q  294 atttgctagttgagccaggacttctagaca 323  Q
     ||||| |||||||  ||||||||||||||    
T  10220572 ttttgccagttgagttaggacttctagaca 10220601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 35309982 - 35309887
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||| |||||| |||||| |||||| || ||||| || |||||| ||| ||||||    
T  35309982 gtcttagatgaagtgataaaccactgaaattaaactcgcacacaattgtgagatcccggattcgaaaccaggtcaagacgtccggccttacaattt 35309887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 274
Target Start/End: Original strand, 31288224 - 31288301
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatga 274  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| | || | ||||||||| | ||||||    
T  31288224 gtcttagatgaagtggtaaaccactgaaattaaacttacacacaactgtgagattccagattcgaacccagatcatga 31288301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 32606330 - 32606461
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    |||||||||||| ||||||  ||||||||||||| ||||| | |||||| ||||| |||||||||||| |||||| || |||||| ||||||||||   |    
T  32606330 gtcttagatgaattggtaattcactgaaattaaattcacataaaactgtaaggtctcgggttcgaacctgggtcacgacgtccggccttgcaatttcggt 32606429  T
Q  294 atttgctagttgagccaggacttctagacaaa 325  Q
    |||||  |||||||  || |||||||||||||    
T  32606430 atttgtcagttgagttagaacttctagacaaa 32606461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 196 - 280
Target Start/End: Complemental strand, 38033858 - 38033774
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccg 280  Q
    |||| ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||| || |||||||| |||  |||||||    
T  38033858 ggtcatagatgaagtggtactccactgaaaataaactcacacacaactgtgaggtcccggatttgaacccggatcacaatgtccg 38033774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 197 - 293
Target Start/End: Complemental strand, 46427487 - 46427392
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt 293  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||||||||||| |||| |||||| ||| ||||||| ||||   |||||||||||    
T  46427487 gtcttagtttaagtggtaaac-actgaaattaaactcacacacaactgtgaggttccggattcgaatccgagtcatgacgtccaaccttgcaatttt 46427392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 197 - 324
Target Start/End: Original strand, 48444152 - 48444282
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||||| || | |||||||||||| | ||| || |||| ||||| ||||||        
T  48444152 gtcttagatgaagtggtaattcactgaaattaaacttacacacaactgtgaagtacagggttcgaacccagatcacgacgtccagtcttacaatttcggc 48444251  T
Q  294 atttgctagttgagccaggacttctagacaa 324  Q
    ||||   |||||||| |||||||||||||||    
T  48444252 atttttcagttgagctaggacttctagacaa 48444282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 200 - 322
Target Start/End: Original strand, 15634882 - 15635007
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tatt 296  Q
    |||||||||||||||| | ||||||| ||||||||||||||||||||| || |||| |||||| |||||||| || |||||   || ||||||    |||    
T  15634882 ttagatgaagtggtaatctactgaaaataaactcacacacaactgtgaagttccggtttcgaatccgggtcacgacgtccgactttacaatttcggcatt 15634981  T
Q  297 tgctagttgagccaggacttctagac 322  Q
    |||||||||||| | |||||||||||    
T  15634982 tgctagttgagctatgacttctagac 15635007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 28603139 - 28603044
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||| ||||| ||| ||||||||||| | ||||| || |||||| ||||| ||||    
T  28603139 gtcttagatgaagtggtaatccactgagattaaactcacatacaattgtgaagtctcgggttcgaactcaggtcacgacgtccggccttgcgattt 28603044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 43203435 - 43203360
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    ||||||| ||||||||  || |||||| || ||||||||||||||||||| |||||||||||||||||||||||||    
T  43203435 ggtcttatatgaagtgaaaatccactgtaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtca 43203360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 214 - 324
Target Start/End: Original strand, 47960972 - 47961085
Alignment:
Q  214 aaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt---atttgctagttgagcca 310  Q
    |||||| |||||||||||||||||||||||  |||||||||||||||||||||| |||||| ||| |  |||| ||||||   |||||| |||||||  |    
T  47960972 aaaccattgaaattaaactcacacacaactacgaggtcccgggttcgaacccggttcatgacgtctgaccttgtaattttggcatttgcaagttgagtta 47961071  T
Q  311 ggacttctagacaa 324  Q
     |||||||||||||    
T  47961072 agacttctagacaa 47961085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 34763560 - 34763510
Alignment:
Q  207 aagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggt 257  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34763560 aagtggtaatccactgaaattaaactcacacacaactgtgaggtcccgggt 34763510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 19630667 - 19630718
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtga 247  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  19630667 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 19630718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 13887282 - 13887207
Alignment:
Q  212 gtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaa 289  Q
    |||| |||||||||||||||||| |||  |||||||||| ||||||||||||| |||||| || ||||||||||||||    
T  13887282 gtaatccactgaaattaaactcataca--actgtgaggttccgggttcgaacctgggtcacgacgtccggtcttgcaa 13887207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 197 - 307
Target Start/End: Original strand, 35577876 - 35577989
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt--- 293  Q
    |||||||||||| | |||| ||| |||||||||||| |||||||| ||||| ||| ||||||||||| ||||||| ||  |||| ||||  ||||||       
T  35577876 gtcttagatgaaattgtaatccattgaaattaaacttacacacaattgtgaagtctcgggttcgaactcgggtcacgacatccgatcttaaaattttagc 35577975  T
Q  294 atttgctagttgag 307  Q
    ||||||||||||||    
T  35577976 atttgctagttgag 35577989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 321
Target Start/End: Original strand, 42081619 - 42081743
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt--- 293  Q
    ||||||||| |||||||||  |||||||| ||||||  |||||||||||||||| || ||||||||||||| |||  | || || ||||||||||||       
T  42081619 gtcttagataaagtggtaattcactgaaaataaact--cacacaactgtgaggt-ccaggttcgaacccggatcacaacgttcgatcttgcaattttgac 42081715  T
Q  294 atttgctagttgagccaggacttctaga 321  Q
    |||||| || ||||| ||||||||||||    
T  42081716 atttgccagctgagctaggacttctaga 42081743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 27915579 - 27915631
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgag 248  Q
    ||||||||||||||||||||  || |||||||||||||| |||||||||||||    
T  27915579 ggtcttagatgaagtggtaattcattgaaattaaactcatacacaactgtgag 27915631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 5462949 - 5463020
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgg 267  Q
    ||||| ||||||||||||   ||| |||||||||||||||||||||||||||| || | |||||||| ||||    
T  5462949 ggtctaagatgaagtggttctccattgaaattaaactcacacacaactgtgagatctcaggttcgaatccgg 5463020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 43170939 - 43171034
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||| ||||||| ||| |||||||||||||||| ||||||| || ||| | | || ||||| |||| | || |||||| ||||||||||    
T  43170939 gtcttagatgacgtggtaatccattgaaattaaactcacatacaactgggaagtctccgatttgaacctgggttacgacgtccggccttgcaattt 43171034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 40657657 - 40657603
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtc 251  Q
    ||||||||||||||| ||| ||||||||||||||||| |||| |||| |||||||    
T  40657657 gtcttagatgaagtgataatccactgaaattaaactcgcacataactatgaggtc 40657603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 25872892 - 25872824
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacc 264  Q
    ||||||||||||||||||||| ||| |||| |||||||| |||||| ||| |||||   ||||||||||    
T  25872892 ggtcttagatgaagtggtaaatcacagaaaataaactcatacacaattgtaaggtcataggttcgaacc 25872824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 228
Target Start/End: Original strand, 47960857 - 47960889
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaatta 228  Q
    |||||||||||||||||||||||||||||||||    
T  47960857 ggtcttagatgaagtggtaaaccactgaaatta 47960889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 292
Target Start/End: Complemental strand, 17753100 - 17753007
Alignment:
Q  202 agatgaagtggtaaaccactgaaattaaactcacacacaac---tgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||| ||||||  || ||||||| ||||||||||||||   ||||||||||||| || |||||||  ||||||| | || |||||||||||    
T  17753100 agatgaattggtaattcattgaaatttaactcacacacaacaattgtgaggtcccggatttgaacccgaatcatgatattcgatcttgcaattt 17753007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 2e-42; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 10639605 - 10639735
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||       
T  10639605 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcgg 10639704  T
Q  293 tatttgctagttgagccaggacttctagaca 323  Q
     |||||| |||||||| ||||||||||||||    
T  10639705 catttgccagttgagctaggacttctagaca 10639735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 33083554 - 33083682
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||        
T  33083554 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 33083653  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||| |||||||| |||||||||||||    
T  33083654 atttgccagttgagctaggacttctagac 33083682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 19048882 - 19048754
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||| |||||| ||| ||||||        
T  19048882 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttcggc 19048783  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||| |||||||| |||||||||||||    
T  19048782 atttgccagttgagctaggacttctagac 19048754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 39831444 - 39831571
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| |||||| ||||||||||   |    
T  39831444 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtccc-ggttcgaacccggatcatgacgtccggccttgcaatttcggt 39831542  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||| |||||||| ||||||| |||||    
T  39831543 atttgccagttgagctaggacttatagac 39831571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 196 - 323
Target Start/End: Complemental strand, 11459844 - 11459714
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||       
T  11459844 ggtcttagatgaagtggtaatccattgaaaataaacacacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccgaccttgcaatttcgg 11459745  T
Q  293 tatttgctagttgagccaggacttctagaca 323  Q
     |||||| |||||||| ||||||||||||||    
T  11459744 catttgccagttgagctaggacttctagaca 11459714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 26605753 - 26605624
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||       
T  26605753 ggtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcgg 26605654  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  26605653 catttgccagttgagctaggacttctagac 26605624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 37197609 - 37197705
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||| | ||||||||||    
T  37197609 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccagccttgcaattt 37197705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 197 - 323
Target Start/End: Original strand, 29659218 - 29659347
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt--- 293  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||  ||||||||||||||||||  |||| ||| ||| |||||||       
T  29659218 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcatgggttcgaacccgggtcacaatgttcggccttacaattttggc 29659317  T
Q  294 atttgctagttgagccaggacttctagaca 323  Q
    |||||| |||||||| ||||||||||||||    
T  29659318 atttgccagttgagctaggacttctagaca 29659347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 197 - 323
Target Start/End: Original strand, 39535534 - 39535663
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||| || || |||||||||||||| | |||||||||||||||||||||||||||||||| || |||||| ||||||||||        
T  39535534 gtcttagatgaagtggtaatccgctcaaattaaactcacataaaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcgac 39535633  T
Q  294 atttgctagttgagccaggacttctagaca 323  Q
    ||||||||||||||  ||||||||||||||    
T  39535634 atttgctagttgagttaggacttctagaca 39535663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 23839987 - 23839859
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt--- 293  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||  | |||||| |||||||||||       
T  23839987 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccaggttcgaacccaggtcacaacgtccggccttgcaattttggc 23839888  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||| |||||||  |||||||||||||    
T  23839887 atttgccagttgagttaggacttctagac 23839859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 196 - 325
Target Start/End: Complemental strand, 34460498 - 34460366
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| | ||||||||||||||||||  | |||||| ||||||||||       
T  34460498 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttctgggttcgaacccgggtcacaacgtccggccttgcaatttcgg 34460399  T
Q  293 tatttgctagttgagccaggacttctagacaaa 325  Q
     |||||  |||||||| ||||||||||||||||    
T  34460398 catttgtcagttgagctaggacttctagacaaa 34460366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 200 - 323
Target Start/End: Complemental strand, 11708803 - 11708677
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tatt 296  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||  | |||||| ||| ||||||    |||    
T  11708803 ttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttacaatttcggcatt 11708704  T
Q  297 tgctagttgagccaggacttctagaca 323  Q
    ||| |||||||| ||||||||||||||    
T  11708703 tgccagttgagctaggacttctagaca 11708677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 196 - 323
Target Start/End: Complemental strand, 19537436 - 19537306
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| |||||||||||||||| |||  | |||||| ||||||||||       
T  19537436 ggtcttagatgaagtggtaatccactgaaaataaacacacacacaactgtgaggttccgggttcgaacccggatcacaacgtccggccttgcaatttcgg 19537337  T
Q  293 tatttgctagttgagccaggacttctagaca 323  Q
     |||||| |||||| | ||||||||||||||    
T  19537336 catttgccagttgaactaggacttctagaca 19537306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 11816549 - 11816680
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaa-ctcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt-- 292  Q
    |||||||||||||||||||| |||||||||||||| |||||| ||||||||||||| |||||||||||||| ||||| || |||||  ||||||||||      
T  11816549 ggtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccgaccttgcaatttcg 11816648  T
Q  293 -tatttgctagttgagccaggacttctagaca 323  Q
      |||||| |||||||| ||||||||| ||||    
T  11816649 gcatttgccagttgagctaggacttctggaca 11816680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 196 - 324
Target Start/End: Complemental strand, 19816349 - 19816218
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    ||||||||||||||| |||| | ||||||| |||||||| ||||||||| ||||| |||||||| |||||||||||  | |||||| ||||||||||       
T  19816349 ggtcttagatgaagttgtaatctactgaaaataaactcatacacaactgcgaggttccgggttcaaacccgggtcacaacgtccggccttgcaatttcgg 19816250  T
Q  293 tatttgctagttgagccaggacttctagacaa 324  Q
    ||||||| |||||||| |||||||||||||||    
T  19816249 tatttgccagttgagctaggacttctagacaa 19816218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 45125164 - 45125294
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||| ||||||||||  ||||  | |||||| ||| ||||||       
T  45125164 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgagttcgaacccaagtcacaacgtccggccttacaatttcgg 45125263  T
Q  293 tatttgctagttgagccaggacttctagaca 323  Q
     |||||| |||||||| ||||||||||||||    
T  45125264 catttgccagttgagctaggacttctagaca 45125294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 27137917 - 27138045
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| |||||||||||||||||||| | |||||| ||||||||||||||||||| ||||| ||||| ||| ||| ||||||       
T  27137917 ggtcttagatgaagtggtaatccactgaaattaaactcacataaaactgtaaggtcccgggttcgaacccaggtcacgatgttcggcctt-caatttcag 27138015  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||  |||||||| |||||||||||||    
T  27138016 catttgtcagttgagctaggacttctagac 27138045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 196 - 281
Target Start/End: Complemental strand, 4851449 - 4851364
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccgg 281  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||| ||| || ||||||    
T  4851449 ggtcttggatgaagtggtaatccactaaaattaaactcacacacaactgtgaggtcccgggtttgaacccggatcacgacgtccgg 4851364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 15782715 - 15782635
Alignment:
Q  199 cttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccg 280  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||||||||||||| |||||    
T  15782715 cttagatgaagtggtaaaccactgaaattaaactcccacac-actgtaaggtctcgggttcgaacccgggtcatgacgtccg 15782635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 200 - 292
Target Start/End: Complemental strand, 43684194 - 43684102
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||| ||| ||||| |||||||||||| || |||| ||||||||||||||||||  |||||| ||||||| ||||||||||    
T  43684194 ttagatgaagtggtaatccagtgaaaataaactcacacataattgtggggtcccgggttcgaacccatgtcatggtgtccggccttgcaattt 43684102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 197 - 268
Target Start/End: Original strand, 7275886 - 7275957
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccggg 268  Q
    ||||||||||||||||||| ||| | |||||||| | |||||||||||||||||||||||||||||||||||    
T  7275886 gtcttagatgaagtggtaatccattaaaattaaatttacacacaactgtgaggtcccgggttcgaacccggg 7275957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 42578296 - 42578236
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggt 257  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||    
T  42578296 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtaccgggt 42578236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 20497592 - 20497657
Alignment:
Q  199 cttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacc 264  Q
    |||||||||||||||||||||||||||| ||||||||| |||| |||||||| ||||||| |||||    
T  20497592 cttagatgaagtggtaaaccactgaaataaaactcacatacaattgtgaggttccgggtttgaacc 20497657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 33001830 - 33001762
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaaccc 265  Q
    |||||||||||| |||||| |||||||||||||||||||| | ||||||||||||| | ||||||||||    
T  33001830 gtcttagatgaaatggtaatccactgaaattaaactcacatataactgtgaggtcctgtgttcgaaccc 33001762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 38440197 - 38440292
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||||||| ||||| |||||||||||||||| | ||  |||||| | |||||| | |||||||| || |||||| ||||||||||    
T  38440197 gtcttagatgaagtggtaatccactaaaattaaactcacacatagctaggaggtctcaggttcggatccgggtcacgacgtccggccttgcaattt 38440292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 43778468 - 43778542
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||   ||||||||||| |||||    
T  43778468 gtcttagatgaagtggtaatccaatgaaaataaactcacacacaactgtgaagtcttaggttcgaacccaggtca 43778542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 44181887 - 44181952
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaa 262  Q
    ||||||||| ||||| ||| ||||||||| |||||||||||||||||||||| |||||| ||||||    
T  44181887 gtcttagattaagtgataatccactgaaaataaactcacacacaactgtgagatcccggattcgaa 44181952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 200 - 292
Target Start/End: Complemental strand, 4801001 - 4800909
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||||  ||||| ||||||||||||||| ||| | ||||| |||||||||||| | ||||| || |||| | ||||||||||    
T  4801001 ttagatgaagtggtaattcactggaattaaactcacacataaccgcgaggttccgggttcgaactcaggtcacgacgtccagccttgcaattt 4800909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 200 - 292
Target Start/End: Complemental strand, 16654488 - 16654396
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||| || ||  |||| ||| |||||||||||||||||||||||| |||||||||||| ||| ||| |  |||||| ||||||||||    
T  16654488 ttagatgaaggggcaattcactaaaaataaactcacacacaactgtgaggttccgggttcgaactcggatcacggcgtccggccttgcaattt 16654396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 42025799 - 42025732
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaa-actcacacacaactgtgaggtcccgggttcgaac 263  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||| |||||||| | ||||||||||    
T  42025799 gtcttagatgaagtggtagtccactgaaattaagactcacacacaattgtgaggttctgggttcgaac 42025732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 200 - 290
Target Start/End: Complemental strand, 7349223 - 7349133
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaat 290  Q
    |||||||||||||| | ||||| |||||||||||||||| |  ||||||||| ||| ||||||| ||| ||| || |||||| ||||||||    
T  7349223 ttagatgaagtggtgatccactaaaattaaactcacacatagttgtgaggtctcggattcgaactcggatcacgacgtccggccttgcaat 7349133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 292
Target Start/End: Original strand, 40786212 - 40786304
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||| |||||| |||  |||| ||||||||||||||| |||||| ||||||   |||||||||| |||||| || |||||| ||||||||||    
T  40786212 ttagaagaagtgataattcactaaaattaaactcacactcaactgcgaggtcttaggttcgaaccagggtcacgacgtccggccttgcaattt 40786304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 225 - 292
Target Start/End: Complemental strand, 38400569 - 38400502
Alignment:
Q  225 attaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||| ||||||||| |||||||| || ||||||||| ||||| || ||||| |||||||||||    
T  38400569 attaaactcgcacacaactatgaggtcctggattcgaaccctggtcacgacgtccgatcttgcaattt 38400502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 200 - 279
Target Start/End: Original strand, 40825161 - 40825240
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtcc 279  Q
    |||||||||||| ||| ||| ||||| |||||||||||||| |||  || || ||| |||||||||||||||||| ||||    
T  40825161 ttagatgaagtgataatccattgaaaataaactcacacacacctggaagatctcggattcgaacccgggtcatgacgtcc 40825240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 12366835 - 12366786
Alignment:
Q  218 cactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgg 267  Q
    |||||| |||||||||||||||||||||||||| ||||||| ||| ||||    
T  12366835 cactgatattaaactcacacacaactgtgaggttccgggtttgaatccgg 12366786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 13106493 - 13106452
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacaca 238  Q
    |||||||||||||||||||| ||||||||| |||||||||||    
T  13106493 gtcttagatgaagtggtaaatcactgaaataaaactcacaca 13106452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 293
Target Start/End: Complemental strand, 21312331 - 21312237
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt 293  Q
    |||||||||||||||||||  |||| ||| ||||||||  ||||| ||||||||||| ||||||| ||| | |||  | |||||||||| |||||||    
T  21312331 gtcttagatgaagtggtaattcactaaaaataaactca--cacaattgtgaggtcccaggttcgatcccagatcacaacgtccggtcttacaatttt 21312237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 29726112 - 29726072
Alignment:
Q  228 aaactcacacacaactgtgaggtcccgggttcgaacccggg 268  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  29726112 aaactcagacacaactgcgaggtcccgggttcgaacccggg 29726072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 34234657 - 34234596
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttc 259  Q
    |||||||||||||||||| | | ||||||||||||||||  ||||||| ||||||| |||||||    
T  34234657 ggtcttagatgaagtggtgatctactgaaattaaactca--cacaactatgaggtctcgggttc 34234596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 45201880 - 45201938
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaac 263  Q
    ||||||||||||| ||||||||||||     |||||||||||||||||||| ||| ||||||||    
T  45201880 ttagatgaagtggcaaaccactgaaa-----ctcacacacaactgtgaggttccgagttcgaac 45201938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 6055004 - 6055070
Alignment:
Q  197 gtcttagatgaagt-ggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaa 262  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||||| || |||||||| | |||||||    
T  6055004 gtcttagataaagtaggtaatccactaaaattaaactcacacacagctatgaggtcctgagttcgaa 6055070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 293
Target Start/End: Complemental strand, 8311399 - 8311361
Alignment:
Q  255 ggttcgaacccgggtcatgatgtccggtcttgcaatttt 293  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  8311399 ggttcgaacctgggtcatgatgtccgatcttgcaatttt 8311361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 15072200 - 15072151
Alignment:
Q  217 ccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgg 267  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||| ||||    
T  15072200 ccactgaaattaaacacacacacaa-tatgaggtcccgggttcgaatccgg 15072151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 861 - 990
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||       
T  861 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcgg 960  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  961 catttgccagttgagctaggacttctagac 990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 6e-42; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 6602517 - 6602646
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||       
T  6602517 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcgg 6602616  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  6602617 catttgccagttgagctaggacttctagac 6602646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 6677970 - 6678099
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||       
T  6677970 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcgg 6678069  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  6678070 catttgccagttgagctaggacttctagac 6678099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 4530981 - 4531111
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||||||||||       
T  4530981 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacagctgtgaggtcccgggttcgaacccgggtcatgacgtccagccttgcaatttcgg 4531080  T
Q  293 tatttgctagttgagccaggacttctagaca 323  Q
     |||||| | |||||| ||||||||||||||    
T  4531081 catttgccaattgagctaggacttctagaca 4531111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 35779496 - 35779625
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt-- 293  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  | |||||| |||||||||||      
T  35779496 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttgg 35779595  T
Q  294 -atttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  35779596 catttgccagttgagctaggacttctagac 35779625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 196 - 323
Target Start/End: Complemental strand, 32333243 - 32333113
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||       
T  32333243 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcgg 32333144  T
Q  293 tatttgctagttgagccaggacttctagaca 323  Q
     |||||| |||||||| ||||||||||||||    
T  32333143 catttgccagttgagctaggacttctagaca 32333113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 42192638 - 42192768
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||| |||||| ||||||||||       
T  42192638 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggtcatgacgtccggccttgcaatttcgg 42192737  T
Q  293 tatttgctagttgagccaggacttctagaca 323  Q
     |||||| |||||||| ||||||||||||||    
T  42192738 catttgccagttgagctaggacttctagaca 42192768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 70523 - 70651
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||||||||||        
T  70523 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcaaacccgggtcatgacgtccgaccttgcaatttcggc 70622  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||| |||||||| |||||||||||||    
T  70623 atttgccagttgagctaggacttctagac 70651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 196 - 324
Target Start/End: Original strand, 1339 - 1470
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt-- 293  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||  | |||||| |||||||||||      
T  1339 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccagggtcacaacgtccggccttgcaattttgg 1438  T
Q  294 -atttgctagttgagccaggacttctagacaa 324  Q
     |||||| |||||||| || ||||||||||||    
T  1439 catttgccagttgagctagaacttctagacaa 1470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 196 - 324
Target Start/End: Complemental strand, 28817385 - 28817254
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||  | |||||| ||||||||||       
T  28817385 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcacaacgtccggccttgcaatttcgg 28817286  T
Q  293 tatttgctagttgagccaggacttctagacaa 324  Q
     |||||| |||||||| |||||||||||||||    
T  28817285 catttgccagttgagctaggacttctagacaa 28817254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 1078647 - 1078743
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  1078647 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacctgggtcatgacgtccggccttgcaattt 1078743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 42885303 - 42885207
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||    
T  42885303 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggccttgcaattt 42885207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 197 - 324
Target Start/End: Complemental strand, 39303438 - 39303307
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaa-ctcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| |||||  ||||||| |||||| ||||||||||       
T  39303438 gtcttagatgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtctcgggttcaaacccatgtcatgacgtccggccttgcaatttcgg 39303339  T
Q  293 tatttgctagttgagccaggacttctagacaa 324  Q
     |||||| |||||||| ||||||||| |||||    
T  39303338 catttgccagttgagctaggacttcttgacaa 39303307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 198 - 322
Target Start/End: Complemental strand, 40911347 - 40911221
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---ta 294  Q
    |||||||||||||||||| ||||||||||||||||||||||||  ||||||||||| ||||||||||||||||| || |||||| ||||||||||    |    
T  40911347 tcttagatgaagtggtaagccactgaaattaaactcacacacagttgtgaggtccc-ggttcgaacccgggtcacgacgtccggccttgcaatttcggca 40911249  T
Q  295 tttgctagttgagccaggacttctagac 322  Q
    ||||| |||||||| || ||||||||||    
T  40911248 tttgccagttgagctagcacttctagac 40911221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 204 - 292
Target Start/End: Complemental strand, 5385459 - 5385371
Alignment:
Q  204 atgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||| | ||||||||||    
T  5385459 atgaagtggtaaatcactgaaattaaactcacacacaactgtgaggtcccgggttcgaacctgggtcacgacgtccagccttgcaattt 5385371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 7792790 - 7792661
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||  | |||| | ||||||||||       
T  7792790 ggtcttagatgaagtagtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgagtcacaacgtccagccttgcaatttcgg 7792691  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  7792690 catttgccagttgagctaggacttctagac 7792661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 200 - 322
Target Start/End: Complemental strand, 7813447 - 7813322
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tatt 296  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||  |  ||||| ||||||||||    |||    
T  7813447 ttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgagtcacaacatccggccttgcaatttcagcatt 7813348  T
Q  297 tgctagttgagccaggacttctagac 322  Q
    |||  ||||||| |||||||||||||    
T  7813347 tgccggttgagctaggacttctagac 7813322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 31969720 - 31969815
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||| |||||| ||| || |||| |||||    
T  31969720 gtcttagatgaagtggtaaaccactgaaattaaattcacacacaactttgaggtcccgtgttcgaacccggatcatgacgtctggccttgaaattt 31969815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 39435410 - 39435282
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt--- 293  Q
    |||||||||||||| |||| ||||  ||||||||||||||||||||||||||||| ||||||||||||| | |||||| |||||  |||||||||||       
T  39435410 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtctcgggttcgaacccagatcatgacgtccgaccttgcaattttgac 39435311  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||| |||||||| || ||||||||||    
T  39435310 atttgccagttgagctagaacttctagac 39435282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 197 - 325
Target Start/End: Complemental strand, 6099700 - 6099569
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||||||||| ||| ||||||||| | ||| ||||||||  ||||||||||| |||||||||| |||||| ||||||||||        
T  6099700 gtcttagatgaagtggtaaaccactaaaactaaactcacgcgcaattgtgaggtttcgggttcgaactcgggtcatgacgtccggccttgcaatttcgac 6099601  T
Q  294 atttgctagttgagccaggacttctagacaaa 325  Q
    |||||| |||||| | ||||||||||||||||    
T  6099600 atttgcaagttgaactaggacttctagacaaa 6099569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 200 - 292
Target Start/End: Original strand, 31532128 - 31532220
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| || ||||||||  | |||||| ||||||||||    
T  31532128 ttagatgaagtggtaatccactgaaattaaactcacacacaactgtgaggtccccggttcaaatccgggtcacaacgtccggccttgcaattt 31532220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 13891218 - 13891144
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||| ||||    
T  13891218 gtcttagatgaagtggtaaaccactgaaaataaactcacacacaactgtgaggtcctaggttcgaacccgagtca 13891144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 45264640 - 45264714
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    |||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  45264640 gtcttagaggaagtggtaatccactgaaattaaactcacacaaaactgtgaggtcccgggttcgaacccgagtca 45264714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 31695269 - 31695400
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt--- 293  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||| |||  ||||||  |||   |||||||||||       
T  31695269 gtcttagatgaagtggtaaaccattgaaattaaactcacacacaattgtgaggtcccaggttcgaatccgaatcatgacatccaaccttgcaattttgac 31695368  T
Q  294 atttgctagttgagccaggacttctagacaaa 325  Q
    || ||| |||||||| || |||||||||||||    
T  31695369 atgtgccagttgagctagaacttctagacaaa 31695400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 197 - 323
Target Start/End: Complemental strand, 29425479 - 29425356
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt--- 293  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| || ||| |||||||      |||||||||||| |||||| |||||||||||       
T  29425479 gtcttagatgaagtggtaatccactgaaattaaactcacacacaattgcgagatcccggg------cccgggtcatgacgtccggccttgcaattttggc 29425386  T
Q  294 atttgctagttgagccaggacttctagaca 323  Q
    |||||| | |||||| ||||||||||||||    
T  29425385 atttgccaattgagctaggacttctagaca 29425356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 197 - 271
Target Start/End: Original strand, 33731464 - 33731538
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  33731464 gtcttagaagaagtggtaaaccactaaaattaaactcacacacaactgggaggtcccgagtttgaacccgggtca 33731538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 198 - 322
Target Start/End: Complemental strand, 9292145 - 9292018
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---ta 294  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |||||||  |||||||  | ||||||  || ||||||    |    
T  9292145 tcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaagtcccgagttcgaattcgggtcacaacgtccggctttacaatttcgaca 9292046  T
Q  295 tttgctagttgagccaggacttctagac 322  Q
    ||||| |||||||| |||||||||||||    
T  9292045 tttgccagttgagctaggacttctagac 9292018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 10963241 - 10963368
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||| || |||  | || ||| |||| |||||       
T  10963241 ggtcttagatgaagtggtaatccactgaaaataaact--cacacaactgtgaggtcccgggttcgaacctggatcacaacgttcggccttgtaatttcgg 10963338  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  10963339 catttgccagttgagctaggacttctagac 10963368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 12534720 - 12534846
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||| | ||||||| ||||||||| ||  |||||||| ||| |||||||||||||| ||| || |||||| ||||||||||        
T  12534720 gtcttagatgaagtggtaatctactgaaaataaactcacgca--actgtgagatcctgggttcgaacccggatcacgacgtccggccttgcaatttcggc 12534817  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||| |||||||| |||||||||||||    
T  12534818 atttgccagttgagctaggacttctagac 12534846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 3822524 - 3822450
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    |||||||| ||||||||||  |||| |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  3822524 gtcttagaagaagtggtaattcactaaaattaaactcacacacaactgtgagatcctgggttcgaacccgggtca 3822450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 14400843 - 14400781
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttc 259  Q
    |||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||||||||    
T  14400843 gtcttagatgaagtggtaaaccacttgaattaaactcactcacaattgtgaggtcccgggttc 14400781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 227 - 324
Target Start/End: Complemental strand, 18386806 - 18386706
Alignment:
Q  227 taaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tatttgctagttgagccaggacttctagaca 323  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||  ||||  ||||||||||    |||||  |||||||| || |||||||||||    
T  18386806 taaactcacacacaactgtgaggtcccgggttcgaacccgagtcatgacatccgaccttgcaatttcagcatttgtcagttgagctagaacttctagaca 18386707  T
Q  324 a 324  Q
    |    
T  18386706 a 18386706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 9775042 - 9775110
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaaccc 265  Q
    |||||||||||||| |||| ||| | |||||||||||||||| ||||||||||| ||||||||||||||    
T  9775042 gtcttagatgaagttgtaatccattcaaattaaactcacacataactgtgaggttccgggttcgaaccc 9775110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 198 - 292
Target Start/End: Original strand, 41849233 - 41849326
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||| |||||| | |||||||||||||||||||||||| ||||||| |||| ||||||||| | ||| || |||||  ||||||||||    
T  41849233 tcttagatgaaatggtaatc-actgaaattaaactcacacacaacagtgaggttccggattcgaacccagatcacgacgtccgaccttgcaattt 41849326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 42364702 - 42364752
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtga 247  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  42364702 gtcttagataaagtggtaaactactgaaattaaactcacacacaactgtga 42364752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 18752468 - 18752401
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaaccc 265  Q
    ||||| ||||||||  || ||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  18752468 tcttanatgaagtgtcaatccactgaaattaaacccacacacaactgtaaggttccgggttcgaaccc 18752401  T

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Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 198 - 293
Target Start/End: Original strand, 7403696 - 7403790
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt 293  Q
    |||||||||||||||||| | ||||||||||| |||||| |||||||||| ||| ||| ||||||| || |||| || |||||  ||| |||||||    
T  7403696 tcttagatgaagtggtaatc-actgaaattaagctcacaaacaactgtgatgtctcggattcgaactcgagtcacgacgtccgaccttacaatttt 7403790  T

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Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 20269657 - 20269607
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgag 248  Q
    ||||||||||| |||||| ||| ||||| ||||||||||||||||||||||    
T  20269657 tcttagatgaaatggtaatccattgaaaataaactcacacacaactgtgag 20269607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 21056286 - 21056236
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgag 248  Q
    ||||||||||| |||||| ||| ||||| ||||||||||||||||||||||    
T  21056286 tcttagatgaaatggtaatccattgaaaataaactcacacacaactgtgag 21056236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 280
Target Start/End: Complemental strand, 2907142 - 2907060
Alignment:
Q  197 gtcttagatgaagtggtaaaccact-gaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccg 280  Q
    |||||||| |||||||||| ||||| |||||||||||| || |  ||||||||||||||||||| ||||||| ||| || |||||    
T  2907142 gtcttagacgaagtggtaatccacttgaaattaaactcccata--actgtgaggtcccgggttcaaacccggatcacgacgtccg 2907060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 40932834 - 40932786
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgag 248  Q
    |||||||||||||||| | ||| |||||||| |||||||||||||||||    
T  40932834 ttagatgaagtggtaatctactaaaattaaagtcacacacaactgtgag 40932786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 322
Target Start/End: Original strand, 41753004 - 41753108
Alignment:
Q  221 tgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tatttgctagttgagccaggacttc 317  Q
    |||||||||||| ||||||||||||||| |   |||||||||  ||| ||| ||  ||||||||||||||||    |||||  |||||||| ||||||||    
T  41753004 tgaaattaaacttacacacaactgtgagattttgggttcgaattcggatcacgacatccggtcttgcaatttcgacatttgtcagttgagctaggacttc 41753103  T
Q  318 tagac 322  Q
    |||||    
T  41753104 tagac 41753108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 44124154 - 44124080
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    |||||| ||||||| ||||  || |||||||||||| |||||||||||||| ||| | ||||||||  |||||||    
T  44124154 gtcttatatgaagtagtaattcaatgaaattaaacttacacacaactgtgaagtctcaggttcgaattcgggtca 44124080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 6e-42; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 34739409 - 34739280
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||       
T  34739409 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcgg 34739310  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  34739309 catttgccagttgagctaggacttctagac 34739280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 197 - 323
Target Start/End: Complemental strand, 1174079 - 1173950
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||        
T  1174079 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccggccttgcaatttcggc 1173980  T
Q  294 atttgctagttgagccaggacttctagaca 323  Q
    |||||| |||||||| ||||||||||||||    
T  1173979 atttgccagttgagctaggacttctagaca 1173950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 197 - 322
Target Start/End: Original strand, 43139906 - 43140034
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||        
T  43139906 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 43140005  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||| |||||||| || ||||||||||    
T  43140006 atttgccagttgagctagaacttctagac 43140034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 197 - 324
Target Start/End: Complemental strand, 53457952 - 53457822
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||  ||||||||||        
T  53457952 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccgaccttgcaatttcggc 53457853  T
Q  294 atttgctagttgagccaggacttctagacaa 324  Q
    |||||| |||||||| |||||||||||||||    
T  53457852 atttgccagttgagctaggacttctagacaa 53457822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 196 - 323
Target Start/End: Complemental strand, 11278107 - 11277981
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||||||||||||||||| ||||||||||       
T  11278107 ggtcttagatgaagtggtaaaccactgaaattaaactcaca----actgtgaggtcccgggtttgaacccgggtcatgatgtccggccttgcaatttcgg 11278012  T
Q  293 tatttgctagttgagccaggacttctagaca 323  Q
     |||||| |||||||| ||||||||||||||    
T  11278011 catttgccagttgagctaggacttctagaca 11277981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 19849502 - 19849631
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||| ||||||||||       
T  19849502 ggtcttagatgaagtggtaaaccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcgg 19849601  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  19849602 catttgccagttgagctaggacttctagac 19849631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 26424857 - 26424985
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||       
T  26424857 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtcc-gccttgcaatttcgg 26424955  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  26424956 catttgccagttgagctaggacttctagac 26424985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 45874184 - 45874055
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt-- 293  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  | |||||| |||||||||||      
T  45874184 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttgg 45874085  T
Q  294 -atttgctagttgagccaggacttctagac 322  Q
     |||||  |||||||| |||||||||||||    
T  45874084 catttgtcagttgagctaggacttctagac 45874055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 28798388 - 28798519
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| || |||||| ||||||||||        
T  28798388 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcggc 28798487  T
Q  294 atttgctagttgagccaggacttctagacaaa 325  Q
    |||||| |||||| | ||||||||||||||||    
T  28798488 atttgccagttgaactaggacttctagacaaa 28798519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 197 - 323
Target Start/End: Complemental strand, 18257457 - 18257328
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||| |||||||||| |||||| |||||| ||||||||||        
T  18257457 gtcttagatgaagtggtaatccactgaaaataaactcacgcacaactgtgaggtcccgggctcgaacccggatcatgacgtccggccttgcaatttcggc 18257358  T
Q  294 atttgctagttgagccaggacttctagaca 323  Q
    |||||| |||||||| ||||||||||||||    
T  18257357 atttgccagttgagctaggacttctagaca 18257328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 54768431 - 54768560
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| |||||||||  |||||| |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||       
T  54768431 ggtcttagatgaagtggtaatccactgaaaaaaaactcgcacacaactgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgcaatttcgg 54768530  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  54768531 catttgccagttgagctaggacttctagac 54768560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 238457 - 238587
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||  |||| | ||||||||||       
T  238457 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccagccttgcaatttcgg 238556  T
Q  293 tatttgctagttgagccaggacttctagaca 323  Q
     |||||  |||||||| ||||||||||||||    
T  238557 catttgacagttgagctaggacttctagaca 238587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 197 - 320
Target Start/End: Complemental strand, 19225387 - 19225261
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||  || ||||||        
T  19225387 gtcttagatgaagtggtaaaccactgaaactaaactcacgcacaattgtgaggtcccgggttcgaacccggatcatgacgtccggctttacaatttcggc 19225288  T
Q  294 atttgctagttgagccaggacttctag 320  Q
    |||||| |||||||| |||||||||||    
T  19225287 atttgccagttgagctaggacttctag 19225261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 196 - 314
Target Start/End: Original strand, 23417482 - 23417603
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt-- 293  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||  | |||||| |||||||||||      
T  23417482 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaagtcccgggttcgaacccgggtcacaacgtccggccttgcaattttgg 23417581  T
Q  294 -atttgctagttgagccaggac 314  Q
     |||||| |||||||| |||||    
T  23417582 catttgccagttgagctaggac 23417603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 198 - 293
Target Start/End: Complemental strand, 55214779 - 55214684
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt 293  Q
    |||||||| ||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| || |||||| |||||||||||    
T  55214779 tcttagataaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttt 55214684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 196 - 323
Target Start/End: Complemental strand, 12735560 - 12735430
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt-- 293  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||  | ||| || ||| |||||||      
T  12735560 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtctggccttacaattttgg 12735461  T
Q  294 -atttgctagttgagccaggacttctagaca 323  Q
     |||||  |||||||| || |||||||||||    
T  12735460 catttgtcagttgagctagtacttctagaca 12735430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 22608113 - 22608018
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||| ||||||||| |||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  22608113 gtctcagatgaagtagtaatccattgaaattaaactcagacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattt 22608018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 206 - 292
Target Start/End: Complemental strand, 39807963 - 39807877
Alignment:
Q  206 gaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||| || ||||||||||    
T  39807963 gaagtggtaatccactgaaattaaactcacacacaactgtgaggtcccgagttcgaactcgggtcacgatgtctggccttgcaattt 39807877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 29581044 - 29581138
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||| || |||||| ||||||||||    
T  29581044 gtcttagatgaagtggtaatccact-aaattaaactcacacacaactgtgaggtctcgggttcgaacctaggtcacgacgtccggccttgcaattt 29581138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 12867970 - 12867874
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||||||||||| |||| ||||||||| ||||||| || |||||  ||||||||||    
T  12867970 ggtcttagatgaagtggtaatccactgaaaataaactcactcacaactgtgagatcccaggttcgaactcgggtcacgacgtccgaccttgcaattt 12867874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 33770696 - 33770628
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaaccc 265  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  33770696 gtcttagatgaagcggtaaaccactgaaattaaactcacacacaactatgaagtcccgggttcgaaccc 33770628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 23710337 - 23710428
Alignment:
Q  201 tagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||| |||||||||||||||||||||  ||||||||||| || |||||||| |||||||| || |||||| ||||||||||    
T  23710337 tagatgaagtggtaatccactgaaattaaactcacacgtaactgtgaggttccaggttcgaatccgggtcacgacgtccggccttgcaattt 23710428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 197 - 280
Target Start/End: Complemental strand, 31015110 - 31015027
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccg 280  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |  ||||||||||  ||||||||||||    
T  31015110 gtcttagatgaagtggtaaagcactgaaattaaactcacacacaactgtgaggttctgaattcgaacccgaatcatgatgtccg 31015027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 232 - 322
Target Start/End: Original strand, 32441119 - 32441212
Alignment:
Q  232 tcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tatttgctagttgagccaggacttctagac 322  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||    |||||| |||||||| |||||||||||||    
T  32441119 tcacgcacaactgtgaggtcccgggttcgaacccgggtcatgatgtctggccttgcaatttcgacatttgccagttgagctaggacttctagac 32441212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 55400356 - 55400261
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||||| |||||| ||| ||||||| |||| |||||| |||||| ||||||||||    
T  55400356 gtcttagatgaagtggtaatccactgaaaataaactcacatacaactatgaggttccgagttcgaatccggatcatgacgtccggccttgcaattt 55400261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 198 - 323
Target Start/End: Complemental strand, 12767214 - 12767086
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---ta 294  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||||||||||  ||| ||||||||| | |||||| ||||| |||| ||||||    |    
T  12767214 tcttagatgaagcagtaaaccagtgaaattaaactcacacacaactgtgaggtttcggattcgaacccagatcatgacgtccgatcttacaatttcggca 12767115  T
Q  295 tttgctagttgagccaggacttctagaca 323  Q
    ||| | |||||||| ||||||||||||||    
T  12767114 tttaccagttgagctaggacttctagaca 12767086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 197 - 324
Target Start/End: Original strand, 19673929 - 19674059
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    |||||| |||||||||||| ||||||||||||||||| |||| || ||||||||||||||||||||||| |||||  | || ||| ||||||||||        
T  19673929 gtcttaaatgaagtggtaatccactgaaattaaactcgcacataattgtgaggtcccgggttcgaacccaggtcacaacgttcggccttgcaatttctac 19674028  T
Q  294 atttgctagttgagccaggacttctagacaa 324  Q
    |||| | |||||||| | |||||||||||||    
T  19674029 atttaccagttgagctaagacttctagacaa 19674059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 207 - 322
Target Start/End: Complemental strand, 37134166 - 37134048
Alignment:
Q  207 aagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tatttgctagt 303  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| ||||||  ||||  |||| |||||    |||||| |||    
T  37134166 aagtggtaaaccactgaaattaaactcacacacaactgtgaagtttcgggttcgaacccggatcatgacatccgaccttgtaatttcagcatttgccagt 37134067  T
Q  304 tgagccaggacttctagac 322  Q
    ||| | |||||||||||||    
T  37134066 tgaactaggacttctagac 37134048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 1966678 - 1966611
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacc 264  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  1966678 gtcttagatgaagttgtaatccactgaaattaaactcacacacaactgtgaggtcccgaattcgaacc 1966611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 2075633 - 2075538
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||| ||||| |||| || |||||||||||||||||| ||||||||||||||||||||||||||   |||||| |||||  ||||||||||    
T  2075633 gtcttagataaagtgataaatcattgaaattaaactcacacataactgtgaggtcccgggttcgaacccaaatcatgacgtccgcccttgcaattt 2075538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 200 - 322
Target Start/End: Original strand, 2864751 - 2864876
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tatt 296  Q
    |||||||||||||||||||  ||||||||| ||||||||||||| |||||| |  ||||||||||||||||| || |||| | ||||||||||    |||    
T  2864751 ttagatgaagtggtaaacctttgaaattaagctcacacacaactctgaggttctaggttcgaacccgggtcacgacgtcccgccttgcaatttaggcatt 2864850  T
Q  297 tgctagttgagccaggacttctagac 322  Q
    ||| |||||||  |||||||||||||    
T  2864851 tgccagttgagttaggacttctagac 2864876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 201 - 324
Target Start/End: Complemental strand, 19814229 - 19814103
Alignment:
Q  201 tagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tattt 297  Q
    ||||||||||||||| | |||||||||||||||||||| || ||||||||||| |||| |||||| ||||| || |||||| ||| ||||||    ||||    
T  19814229 tagatgaagtggtaatcaactgaaattaaactcacacataattgtgaggtcccaggtttgaacccaggtcacgacgtccggccttacaatttctgcattt 19814130  T
Q  298 gctagttgagccaggacttctagacaa 324  Q
    || |||||||| | |||||||| ||||    
T  19814129 gccagttgagctaagacttctaaacaa 19814103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 37620745 - 37620677
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaaccc 265  Q
    ||||| ||||||||||||| |||||||||||||||||||||| | ||||||  ||||||||||||||||    
T  37620745 gtctttgatgaagtggtaatccactgaaattaaactcacacaaacctgtgatatcccgggttcgaaccc 37620677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 24417878 - 24417973
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||| || |||||||||| ||||| ||||||||||||  ||||||||||||||| ||| ||||||||||||||| || |||  | ||||||||||    
T  24417878 gtcttggaagaagtggtaatccactaaaattaaactcatccacaactgtgaggtctcggattcgaacccgggtcacgacgtcgtgccttgcaattt 24417973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 19119258 - 19119204
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtc 251  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||    
T  19119258 ggtcttagatggagtagtaaaccactgaaattaaactcacacac-actgtgaggtc 19119204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 22910281 - 22910352
Alignment:
Q  221 tgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||| | ||||||||||||| |||| ||||||||||||||||| || |||||  ||||||||||    
T  22910281 tgaaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaattt 22910352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 221 - 292
Target Start/End: Complemental strand, 22968241 - 22968170
Alignment:
Q  221 tgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||| | ||||||||||||| |||| ||||||||||||||||| || |||||  ||||||||||    
T  22968241 tgaaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaattt 22968170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 23532172 - 23532117
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgg 255  Q
    ||||| ||||||||||  |||||||||||||||||||||||||||||| |||||||    
T  23532172 ttagaagaagtggtaattcactgaaattaaactcacacacaactgtgaagtcccgg 23532117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 44369916 - 44369965
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtga 247  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  44369916 gtcttagatga-gcggtaaaccactgaaattaaactcacacacaactgtga 44369965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 50033510 - 50033436
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    |||||| ||||||||||||  || |||||||||||| |||||||||||||| ||| |  ||||||||||||||||    
T  50033510 gtcttatatgaagtggtaattcattgaaattaaacttacacacaactgtgatgtctcatgttcgaacccgggtca 50033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 50347329 - 50347387
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgg 255  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||| | |||||||    
T  50347329 gtcttagatgaggtggtaatccactgaaattaaactcacacacatctgtaatgtcccgg 50347387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 52171989 - 52172043
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggt 250  Q
    ||||||| || ||||||||| ||||||||||||||||||||||||| ||||||||    
T  52171989 ggtcttaaataaagtggtaatccactgaaattaaactcacacacaattgtgaggt 52172043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 52768300 - 52768365
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaa 262  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||||||||||| |||  ||||||||    
T  52768300 ggtcttagatgaa-tggtaatccattgaaattaaactcacacacaactgtgagatccttggttcgaa 52768365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 3465842 - 3465755
Alignment:
Q  235 cacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tatttgctagttgagccaggacttcta 319  Q
    ||||||||| |||||||||| ||||||||| || |||  | |||||| ||||||||||   |||||||||||||||| ||||||||||    
T  3465842 cacacaactatgaggtcccgagttcgaacctggatcacaacgtccggccttgcaatttcgatatttgctagttgagctaggacttcta 3465755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 292
Target Start/End: Original strand, 49030754 - 49030833
Alignment:
Q  212 gtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||| |||||||| |||||||||||||||||| |||||| || ||||||||| ||| ||| || |||||| ||||||||||    
T  49030754 gtaatccactgaagttaaactcacacacaactatgaggttcc-ggttcgaactcggatcacgacgtccggccttgcaattt 49030833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 48822940 - 48822890
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgag 248  Q
    ||||| |||||||||||| | | ||||||||||||||||||||||||||||    
T  48822940 tcttaaatgaagtggtaatctattgaaattaaactcacacacaactgtgag 48822890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 51287730 - 51287676
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaa-ctcacacacaactgtgaggt 250  Q
    |||||||||||| ||||||  ||||||||||||| ||||||||||||||||||||    
T  51287730 gtcttagatgaaatggtaattcactgaaattaaaactcacacacaactgtgaggt 51287676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 16555435 - 16555382
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggt 250  Q
    |||||||||||||||||||  || | |||||||| |||||||||||||||||||    
T  16555435 gtcttagatgaagtggtaattcattaaaattaaattcacacacaactgtgaggt 16555382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 24517983 - 24518078
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||| |||| |||||||||  || | |||||||||||||||| || |||||| |  ||||||||||| |||||||  | |||||||||| ||||||    
T  24517983 gtctgagattaagtggtaattcattaaaattaaactcacacataattgtgagatttcgggttcgaacacgggtcacaacgtccggtcttacaattt 24518078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 1126014 - 1125964
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgag 248  Q
    ||||||||||||||||||   | |||||||||||||| |||||||||||||    
T  1126014 tcttagatgaagtggtaatttattgaaattaaactcatacacaactgtgag 1125964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 198 - 271
Target Start/End: Complemental strand, 2804647 - 2804576
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    ||||| |||||||||||| ||||| |||||||||||||| | |||  | ||||||  |||||||||||||||||    
T  2804647 tcttaaatgaagtggtaatccacttaaattaaactcacataaaac--taaggtcctaggttcgaacccgggtca 2804576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 50036020 - 50035946
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    |||||| ||||||| ||||  || |||||||||||| |||||||||||||| ||| | ||||||||  |||||||    
T  50036020 gtcttatatgaagtagtaattcaatgaaattaaacttacacacaactgtgaagtctcaggttcgaattcgggtca 50035946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 516457 - 516518
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttc 259  Q
    ||||||||||||  |||| |||| |||| ||||||||||||||| |||||| ||| ||||||    
T  516457 tcttagatgaagctgtaatccaccgaaaataaactcacacacaattgtgagatcctgggttc 516518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 13184786 - 13184835
Alignment:
Q  83 aattcttgttggatgtcgttgtaaaactagtttgcactgacaatgcatgt 132  Q
    ||||||| |||||  || ||||||||||||||| ||||||||||||||||    
T  13184786 aattcttattggacatcattgtaaaactagtttacactgacaatgcatgt 13184835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 80; Significance: 4e-37; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 13950 - 14079
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||  | |||||| ||||||||||       
T  13950 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgcaatttcgg 14049  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
    ||||||| |||||||| |||||||||||||    
T  14050 tatttgccagttgagctaggacttctagac 14079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 19630 - 19759
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||  | |||||| ||||||||||       
T  19630 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgcaatttcgg 19729  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
    ||||||| |||||||| |||||||||||||    
T  19730 tatttgccagttgagctaggacttctagac 19759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 4e-37; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 13204086 - 13203957
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||       
T  13204086 ggtcttagatgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcgg 13203987  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  13203986 catttgccagttgagctaggacttctagac 13203957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 21018352 - 21018223
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt-- 293  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  | |||||| || ||||||||      
T  21018352 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggcctcgcaattttgg 21018253  T
Q  294 -atttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  21018252 catttgccagttgagctaggacttctagac 21018223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 31909384 - 31909480
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||    
T  31909384 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtctggccttgcaattt 31909480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 200 - 325
Target Start/End: Original strand, 1191543 - 1191671
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatt---ttatt 296  Q
    ||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || |||||| |||||||||   | |||    
T  1191543 ttagatgaagttgtaagccactgaaattaaactcacacacaattgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcgtcatt 1191642  T
Q  297 tgctagttgagccaggacttctagacaaa 325  Q
    ||| |||||||| ||||||||||||||||    
T  1191643 tgccagttgagctaggacttctagacaaa 1191671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 35317696 - 35317826
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| | |||||  ||||||||||       
T  35317696 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaccccaggtcataacgtccgaccttgcaatttcgg 35317795  T
Q  293 tatttgctagttgagccaggacttctagaca 323  Q
     |||||| |||||||| ||||||||||||||    
T  35317796 catttgccagttgagctaggacttctagaca 35317826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 196 - 321
Target Start/End: Original strand, 4824938 - 4825066
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||| ||||| ||||||  | |||||| ||||||||||       
T  4824938 ggtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggtttgaacctgggtcacaacgtccggccttgcaatttcgg 4825037  T
Q  293 tatttgctagttgagccaggacttctaga 321  Q
     |||||| |||||||| ||||||||||||    
T  4825038 catttgccagttgagctaggacttctaga 4825066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 196 - 271
Target Start/End: Complemental strand, 29266004 - 29265929
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  29266004 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtca 29265929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 200 - 292
Target Start/End: Original strand, 17984745 - 17984837
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||||||||||| ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| || ||||  |||||||||||    
T  17984745 ttagatgaagtgataagccactaaaattaaactcacacacaactgtgaggttccgggttcgaacccgagtcaggacgtccaatcttgcaattt 17984837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 12257485 - 12257356
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||| |||||||||||| |||||  | ||| || ||| ||||||       
T  12257485 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaattatgaggtcctgggttcgaacccaggtcacaacgtctggccttacaatttcgg 12257386  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  12257385 catttgccagttgagctaggacttctagac 12257356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 2971112 - 2971038
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtca 271  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||| | |||||||||||||||||    
T  2971112 gtcttagatgaagtggtaatccaccgaaaataaactcacacacaactgtgaggtctcaggttcgaacccgggtca 2971038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 206 - 323
Target Start/End: Complemental strand, 27721550 - 27721430
Alignment:
Q  206 gaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tatttgctag 302  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||||||||||| ||||||||||| || |||||   |||||||||    |||| | ||    
T  27721550 gaagtggtaatccactgaaattaaattcacatacaactgtgaggtcccgggttcaaacccgggtcacgacgtccgactttgcaatttcggcattttccag 27721451  T
Q  303 ttgagccaggacttctagaca 323  Q
    |||||| ||||||||||||||    
T  27721450 ttgagctaggacttctagaca 27721430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 200 - 293
Target Start/End: Complemental strand, 6021117 - 6021024
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt 293  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||  | ||| || |||||||||||    
T  6021117 ttagataaagtggtaatccactgaaaataaactcacacacaactgagaggtcccgggttcgaatccgggtcacaacgtcaggccttgcaatttt 6021024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 32143413 - 32143474
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggt 257  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  32143413 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggt 32143474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 197 - 318
Target Start/End: Complemental strand, 8734125 - 8734000
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaa-ctcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    ||||||||||||||||||| |||||||| ||||| |||||  ||||||||||||| |||||||||||||  ||||| || |||||| ||||||||||       
T  8734125 gtcttagatgaagtggtaatccactgaagttaaaactcacgtacaactgtgaggttccgggttcgaacctaggtcacgacgtccggccttgcaatttcag 8734026  T
Q  293 tatttgctagttgagccaggacttct 318  Q
     |||||| |||||||| |||||||||    
T  8734025 catttgccagttgagctaggacttct 8734000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 221 - 322
Target Start/End: Original strand, 9576985 - 9577089
Alignment:
Q  221 tgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tatttgctagttgagccaggacttc 317  Q
    |||||||||||||||| ||||||||||||| | |||||||||||| |||||||| ||| || ||||||||||    |||||| |||||||| ||||||||    
T  9576985 tgaaattaaactcacatacaactgtgaggttctgggttcgaacccaggtcatgacgtctggccttgcaatttcagcatttgccagttgagctaggacttc 9577084  T
Q  318 tagac 322  Q
    |||||    
T  9577085 tagac 9577089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 197 - 323
Target Start/End: Complemental strand, 11124780 - 11124651
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaatttt--- 293  Q
    ||||||||||||||||||| ||||| ||||||||| |||| | || | |||||| | ||||||||| |  ||||| || |||||| |||||||||||       
T  11124780 gtcttagatgaagtggtaatccactcaaattaaacccacataaaattatgaggttctgggttcgaatcaaggtcacgacgtccggccttgcaattttgac 11124681  T
Q  294 atttgctagttgagccaggacttctagaca 323  Q
    |||||| |||||||| ||||||||||||||    
T  11124680 atttgccagttgagctaggacttctagaca 11124651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 28591350 - 28591445
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||||||||||  | |||| ||||||| ||||  | |||||| ||||||||||    
T  28591350 gtctaagatgaagtggtaaaccactgacattaaactcatacacaactgtgaggtttcaggtttgaacccgagtcactacgtccggccttgcaattt 28591445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 200 - 325
Target Start/End: Complemental strand, 40177749 - 40177621
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---tatt 296  Q
    |||||||||||||||| ||||||||| |||||||||||||||| |||| || ||||||| ||| || |||||  | |||||| ||||||||||    |||    
T  40177749 ttagatgaagtggtaatccactgaaaataaactcacacacaacggtgaagttccgggttggaatccaggtcacaacgtccggccttgcaatttcgacatt 40177650  T
Q  297 tgctagttgagccaggacttctagacaaa 325  Q
    ||  |||| ||| ||||||||||||||||    
T  40177649 tgtcagttaagctaggacttctagacaaa 40177621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 21112178 - 21112110
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacc 264  Q
    |||||||||||| ||||||| ||||||||| |||||||| |||||||| ||||||||| ||||||||||    
T  21112178 ggtcttagatgatgtggtaatccactgaaaataaactcaaacacaactttgaggtcccaggttcgaacc 21112110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 35546061 - 35545966
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||| ||| ||||| ||||||||| |||| |||||||||||||||| ||||||||  ||| ||| || || |||| |||||||||    
T  35546061 gtcttagatgaagtgataatccacttaaattaaacccacatacaactgtgaggtcccaggttcgaattcggatcacgacgttcggttttgcaattt 35545966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 23262672 - 23262606
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaac 263  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| |  |||||||||    
T  23262672 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggttctaggttcgaac 23262606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 2786398 - 2786338
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggtt 258  Q
    ||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||| ||||    
T  2786398 gtcttagatgaagtggtaatccactgaa-ttaaactcatacacaactgtgaggtcccaggtt 2786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 4925714 - 4925673
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacaca 238  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  4925714 gtcttagatgaagtggtaaaccactgaaattaaacttacaca 4925673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 3386894 - 3386946
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggt 250  Q
    ||||||| |||||||||| |||||||||||||| |||||||||||| ||||||    
T  3386894 tcttagaagaagtggtaatccactgaaattaaattcacacacaactttgaggt 3386946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 19181838 - 19181789
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtga 247  Q
    |||||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  19181838 gtcttaaatgaagtg-taatccactgaaattaaactcacacacaactgtga 19181789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 8533862 - 8533813
Alignment:
Q  91 ttggatgtcgttgtaaaactagtttgcactgacaatgcatgtcccttttt 140  Q
    |||| ||||| |||||||||||||| |||||||||||||| |||||||||    
T  8533862 ttggttgtcggtgtaaaactagtttacactgacaatgcatatcccttttt 8533813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 17465205 - 17465147
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggt 257  Q
    ||||||||||||||||||| ||||||||||||||||   ||| || |||||||||||||||    
T  17465205 gtcttagatgaagtggtaatccactgaaattaaact--tacaaaattgtgaggtcccgggt 17465147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 41580078 - 41580142
Alignment:
Q  200 ttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacc 264  Q
    |||||||||||||||| ||| | |||||||||  |||||||||||||||||  ||| ||||||||    
T  41580078 ttagatgaagtggtaatccattaaaattaaacctacacacaactgtgaggtttcggattcgaacc 41580142  T

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Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 280
Target Start/End: Complemental strand, 14270652 - 14270569
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccg 280  Q
    ||||||||||||||| ||| ||||||||| |||||| | |||||||| |||| || |||||| |||  ||||||| || |||||    
T  14270652 gtcttagatgaagtgataatccactgaaaataaacttaaacacaactatgagatctcgggttggaatacgggtcacgacgtccg 14270569  T

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Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 28423241 - 28423298
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtccc 253  Q
    ||||||||||||| ||||||   | |||||| |||||||||||||| |||||||||||    
T  28423241 ggtcttagatgaaatggtaatatagtgaaataaaactcacacacaattgtgaggtccc 28423298  T

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Target: scaffold0038 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 114380 - 114252
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt---t 293  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||| |||||| ||| ||||||        
T  114380 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttcggc 114281  T
Q  294 atttgctagttgagccaggacttctagac 322  Q
    |||||| |||||||| |||||||||||||    
T  114280 atttgccagttgagctaggacttctagac 114252  T

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Target: scaffold0044 (Bit Score: 76; Significance: 9e-35; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 196 - 322
Target Start/End: Original strand, 9972 - 10101
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||| | || |||||| ||||||||||       
T  9972 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactatgaggtcccgggttcgaacccgggttacgacgtccggccttgcaatttcgg 10071  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  10072 catttgccagttgagctaggacttctagac 10101  T

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Target: scaffold0032 (Bit Score: 76; Significance: 9e-35; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 56610 - 56481
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt--- 292  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||  | |||||  ||||||||||       
T  56610 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccgaccttgcaatttcgg 56511  T
Q  293 tatttgctagttgagccaggacttctagac 322  Q
     |||||| |||||||| |||||||||||||    
T  56510 catttgccagttgagctaggacttctagac 56481  T

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Target: scaffold0053 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 22291 - 22196
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt 292  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||| || |||||| ||| ||||||    
T  22291 gtcttagatgaagtggtaatccactgaaattaaactcacacgcaactgtgaggtcccgggctcgaacccgggtcacgacgtccggccttacaattt 22196  T

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Target: scaffold0352 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 8943 - 9012
Alignment:
Q  197 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccg 266  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||    
T  8943 gtcttagatgaagtggtaaatcactgaaattaaactcacacacaactgtgaggtcctaggttcgaacccg 9012  T

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Target: scaffold0067 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 196 - 318
Target Start/End: Complemental strand, 34948 - 34822
Alignment:
Q  196 ggtcttagatgaagtggtaaaccactgaaatt-aaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgcaattt-- 292  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||| || |||||||||  |||| || |||||| ||||||||||      
T  34948 ggtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgcgaggtcctggattcgaacccatgtcacgacgtccggccttgcaatttcg 34849  T
Q  293 -tatttgctagttgagccaggacttct 318  Q
      |||||| |||||||| |||||||||    
T  34848 gcatttgccagttgagctaggacttct 34822  T

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Target: scaffold0360 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 292
Target Start/End: Complemental strand, 14632 - 14528
Alignment:
Q  198 tcttagatgaagtggtaaaccactgaaattaaactcacacacaa----------ctgtgaggtcccgggttcgaacccgggtcatgatgtccggtcttgc 287  Q
    |||||||| ||||||||| ||||||||||||||||||||||||           |||||||||||||||||||||||||| ||| || |||||| |||||    
T  14632 tcttagattaagtggtaatccactgaaattaaactcacacacacatctgtgactctgtgaggtcccgggttcgaacccggatcacgacgtccggccttgc 14533  T
Q  288 aattt 292  Q
    |||||    
T  14532 aattt 14528  T

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Target: scaffold0360; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 14776 - 14726
Alignment:
Q  218 cactgaaattaaactca--cacacaactgtgaggtcccgggttcgaacccg 266  Q
    |||||||||||||||||  ||||||| |||||||| |||||||||||||||    
T  14776 cactgaaattaaactcagacacacaattgtgaggttccgggttcgaacccg 14726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 276
Target Start/End: Original strand, 15141 - 15213
Alignment:
Q  204 atgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgatg 276  Q
    |||||||||||| |||||||||||||||| ||||  ||||||||| |||| |||| |||  || |||||||||    
T  15141 atgaagtggtaagccactgaaattaaacttacacgtaactgtgagatccccggtttgaattcgagtcatgatg 15213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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