View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11521_high_12 (Length: 249)
Name: NF11521_high_12
Description: NF11521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11521_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 28437526 - 28437290
Alignment:
| Q |
1 |
aattgtacaaaccaatcctacaattataatcaaagaaattcctaaaagaattgatatcaaaatgatcaaagtatcatgaccttttctctttttggtttta |
100 |
Q |
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| T |
28437526 |
aattgtacaaaccaatcctacaattataatcacagaaattcctaaaagaattgatatcaaaatgatcaaagtatcatgaccttttctctttttggtttta |
28437427 |
T |
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| Q |
101 |
tcatcatgatcttccttcaaattggagagaggtgatggagaatcaattttcttcatttgggaatttggtatgcaatccccatacatgttgtttgaatcaa |
200 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28437426 |
tcatcgtgatcttccttcaaattggagagaggtgatggagaatcaattttcttcatttgggaatttggtatgcaatccccatacatgttgtttgaatcaa |
28437327 |
T |
|
| Q |
201 |
ttagagaatatccttctagacaagtacacattggcct |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
28437326 |
ttagagaatatccttctagacaagtacacattggcct |
28437290 |
T |
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