View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11521_high_14 (Length: 225)
Name: NF11521_high_14
Description: NF11521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11521_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 14 - 208
Target Start/End: Original strand, 33229741 - 33229935
Alignment:
| Q |
14 |
cacagagactatctatatcatatatatgtaagtgtaactggttcttttttcttgtagggagcataaattatcagattatgaaaaaagtctctctgatgtg |
113 |
Q |
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| T |
33229741 |
cacagagactatctatatcatatatatgtaagtgtaactggttcttttttcttgtagggagcataaattatcagattatgtaaaaagtctctctgatgtg |
33229840 |
T |
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| Q |
114 |
gttaaggagttgaggcgtcatttgaaaagttgtgaactggaaattggtatataaataactacatgtgttctgtggtgcttcttgttacttcaatc |
208 |
Q |
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| T |
33229841 |
gttaaggagttgaggcgtcatttgaaaagttgtgaactggaaattggtatataaataactacatgtgttctgtggtgcttcttgttacttcaatc |
33229935 |
T |
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