View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11521_high_3 (Length: 559)

Name: NF11521_high_3
Description: NF11521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11521_high_3
NF11521_high_3
[»] chr6 (17 HSPs)
chr6 (1-544)||(19264603-19265146)
chr6 (118-228)||(10067719-10067830)
chr6 (118-199)||(9436738-9436820)
chr6 (118-226)||(10219536-10219645)
chr6 (118-226)||(33806649-33806758)
chr6 (118-228)||(515990-516101)
chr6 (121-207)||(34937447-34937534)
chr6 (121-225)||(20565773-20565877)
chr6 (118-205)||(25085083-25085171)
chr6 (121-165)||(34806669-34806713)
chr6 (143-229)||(6524840-6524927)
chr6 (121-226)||(27223680-27223786)
chr6 (122-175)||(9762615-9762668)
chr6 (128-165)||(31315290-31315327)
chr6 (118-197)||(515755-515835)
chr6 (145-228)||(9307488-9307572)
chr6 (121-165)||(28748036-28748080)
[»] chr1 (33 HSPs)
chr1 (363-544)||(44980432-44980613)
chr1 (118-228)||(6727994-6728105)
chr1 (116-225)||(32669976-32670086)
chr1 (117-207)||(42219947-42220037)
chr1 (118-226)||(39162405-39162514)
chr1 (141-229)||(50804262-50804351)
chr1 (118-201)||(14926308-14926392)
chr1 (118-209)||(33747285-33747377)
chr1 (118-224)||(27900620-27900727)
chr1 (118-224)||(30050592-30050699)
chr1 (118-228)||(34177483-34177594)
chr1 (177-227)||(32669783-32669833)
chr1 (116-228)||(31134720-31134833)
chr1 (119-201)||(5529869-5529952)
chr1 (118-228)||(27463722-27463833)
chr1 (118-211)||(19464229-19464323)
chr1 (138-174)||(2261953-2261989)
chr1 (118-220)||(30519042-30519146)
chr1 (116-206)||(9890694-9890785)
chr1 (138-228)||(16192262-16192353)
chr1 (118-165)||(29795258-29795305)
chr1 (136-206)||(38445185-38445256)
chr1 (118-165)||(39329983-39330030)
chr1 (121-168)||(40193067-40193114)
chr1 (118-207)||(5529624-5529714)
chr1 (117-210)||(27900900-27900994)
chr1 (150-206)||(10018722-10018779)
chr1 (119-227)||(27463906-27464015)
chr1 (151-206)||(2998898-2998954)
chr1 (152-208)||(28623875-28623931)
chr1 (181-209)||(33746816-33746844)
chr1 (130-206)||(50155530-50155606)
chr1 (121-165)||(52361961-52362005)
[»] chr2 (21 HSPs)
chr2 (117-231)||(40124258-40124373)
chr2 (118-204)||(7165744-7165831)
chr2 (118-227)||(6788484-6788594)
chr2 (122-212)||(18903171-18903264)
chr2 (118-227)||(20167590-20167700)
chr2 (118-189)||(34883934-34884006)
chr2 (122-220)||(14441108-14441207)
chr2 (121-175)||(19206503-19206557)
chr2 (118-165)||(20966214-20966261)
chr2 (138-210)||(15301604-15301677)
chr2 (120-165)||(17742523-17742568)
chr2 (118-204)||(23359364-23359452)
chr2 (118-165)||(2687157-2687204)
chr2 (120-198)||(20966043-20966122)
chr2 (121-175)||(12676432-12676486)
chr2 (151-204)||(35150369-35150423)
chr2 (116-224)||(18902941-18903049)
chr2 (128-165)||(42657809-42657846)
chr2 (121-204)||(18857990-18858074)
chr2 (118-204)||(20360316-20360404)
chr2 (172-228)||(34549396-34549452)
[»] chr7 (27 HSPs)
chr7 (117-221)||(14669237-14669342)
chr7 (120-230)||(38838646-38838757)
chr7 (136-233)||(8062886-8062984)
chr7 (118-225)||(32996500-32996608)
chr7 (118-227)||(40355068-40355178)
chr7 (118-208)||(12849716-12849807)
chr7 (119-230)||(46720016-46720128)
chr7 (118-230)||(3399874-3399987)
chr7 (119-235)||(5358197-5358314)
chr7 (116-208)||(25688972-25689065)
chr7 (121-227)||(6983273-6983380)
chr7 (118-236)||(34703618-34703736)
chr7 (121-166)||(23457609-23457654)
chr7 (121-166)||(23533114-23533159)
chr7 (120-211)||(1247512-1247603)
chr7 (116-164)||(5197963-5198011)
chr7 (117-165)||(8929512-8929560)
chr7 (153-228)||(18942734-18942810)
chr7 (387-471)||(28809457-28809541)
chr7 (151-230)||(39608612-39608692)
chr7 (118-211)||(10228708-10228808)
chr7 (128-166)||(23474781-23474819)
chr7 (118-211)||(29196767-29196865)
chr7 (108-165)||(46719829-46719886)
chr7 (116-207)||(5362262-5362354)
chr7 (117-220)||(11459008-11459112)
chr7 (119-206)||(37502186-37502274)
[»] chr8 (23 HSPs)
chr8 (119-230)||(4586745-4586857)
chr8 (106-211)||(28929511-28929616)
chr8 (122-165)||(13002958-13003001)
chr8 (117-207)||(6915266-6915354)
chr8 (120-228)||(17488193-17488302)
chr8 (121-165)||(34281395-34281439)
chr8 (115-174)||(41303146-41303205)
chr8 (117-226)||(2987142-2987251)
chr8 (118-211)||(9598069-9598163)
chr8 (119-204)||(6915514-6915599)
chr8 (106-206)||(7574617-7574718)
chr8 (100-225)||(21145615-21145743)
chr8 (116-228)||(21601905-21602017)
chr8 (117-228)||(18080444-18080556)
chr8 (119-206)||(42660068-42660156)
chr8 (118-169)||(8340119-8340170)
chr8 (121-206)||(23357386-23357472)
chr8 (150-227)||(24017897-24017975)
chr8 (118-151)||(2988350-2988383)
chr8 (153-205)||(14532452-14532505)
chr8 (118-211)||(33508432-33508524)
chr8 (121-165)||(10708612-10708656)
chr8 (117-224)||(35855560-35855667)
[»] chr4 (44 HSPs)
chr4 (118-228)||(12034379-12034490)
chr4 (120-229)||(35255463-35255573)
chr4 (120-233)||(56095201-56095315)
chr4 (116-225)||(51151017-51151127)
chr4 (118-207)||(46804773-46804863)
chr4 (116-228)||(11840030-11840143)
chr4 (118-205)||(4215165-4215253)
chr4 (118-200)||(924811-924894)
chr4 (117-211)||(51234243-51234338)
chr4 (118-219)||(35763064-35763166)
chr4 (118-224)||(12163043-12163147)
chr4 (119-225)||(13834508-13834614)
chr4 (118-228)||(17381281-17381392)
chr4 (117-211)||(17381547-17381642)
chr4 (103-201)||(31241238-31241336)
chr4 (118-206)||(971864-971953)
chr4 (123-211)||(12922180-12922269)
chr4 (118-229)||(4161618-4161730)
chr4 (117-228)||(11839765-11839877)
chr4 (118-229)||(13834323-13834435)
chr4 (117-228)||(31903482-31903594)
chr4 (119-206)||(45615621-45615709)
chr4 (126-207)||(20217460-20217541)
chr4 (119-228)||(32934139-32934249)
chr4 (125-230)||(50384345-50384451)
chr4 (117-229)||(1758295-1758408)
chr4 (117-165)||(7616950-7616998)
chr4 (121-228)||(8170962-8171070)
chr4 (118-165)||(8170760-8170807)
chr4 (119-186)||(12163192-12163259)
chr4 (122-165)||(33360875-33360918)
chr4 (121-175)||(2350920-2350974)
chr4 (121-175)||(30888523-30888577)
chr4 (118-207)||(42375231-42375321)
chr4 (155-228)||(46871522-46871596)
chr4 (119-200)||(51226106-51226188)
chr4 (121-205)||(20177280-20177365)
chr4 (121-228)||(1758467-1758574)
chr4 (119-175)||(25855265-25855321)
chr4 (147-202)||(27146438-27146494)
chr4 (122-174)||(27298579-27298631)
chr4 (119-175)||(30623708-30623764)
chr4 (118-201)||(39330929-39331013)
chr4 (118-204)||(40407477-40407565)
[»] chr3 (29 HSPs)
chr3 (116-206)||(30843800-30843891)
chr3 (118-210)||(40619188-40619281)
chr3 (119-225)||(14984407-14984513)
chr3 (118-206)||(621857-621944)
chr3 (116-228)||(43837080-43837193)
chr3 (121-174)||(47944335-47944388)
chr3 (118-225)||(21568531-21568639)
chr3 (118-200)||(38989754-38989837)
chr3 (118-208)||(47944547-47944638)
chr3 (119-211)||(40618887-40618980)
chr3 (177-230)||(41898078-41898131)
chr3 (124-204)||(45681391-45681472)
chr3 (117-192)||(17573185-17573261)
chr3 (138-225)||(26483037-26483125)
chr3 (117-228)||(26499982-26500094)
chr3 (118-204)||(5800176-5800263)
chr3 (118-225)||(23152064-23152166)
chr3 (118-205)||(32537463-32537550)
chr3 (106-203)||(45681143-45681242)
chr3 (121-226)||(257807-257913)
chr3 (96-228)||(4563750-4563884)
chr3 (131-203)||(34480135-34480208)
chr3 (118-174)||(37326825-37326879)
chr3 (118-175)||(43838821-43838878)
chr3 (121-166)||(44380088-44380133)
chr3 (125-184)||(3445716-3445776)
chr3 (117-165)||(43838499-43838547)
chr3 (177-229)||(51889753-51889805)
chr3 (121-224)||(53705953-53706057)
[»] chr5 (28 HSPs)
chr5 (117-211)||(17676791-17676886)
chr5 (122-208)||(27001388-27001475)
chr5 (118-225)||(6217641-6217749)
chr5 (107-234)||(14468760-14468888)
chr5 (103-211)||(32270629-32270738)
chr5 (116-194)||(31949276-31949355)
chr5 (121-226)||(16127049-16127155)
chr5 (117-226)||(8206290-8206400)
chr5 (121-198)||(13200583-13200661)
chr5 (118-226)||(917156-917265)
chr5 (116-165)||(14461768-14461817)
chr5 (118-206)||(30118645-30118734)
chr5 (124-228)||(42420532-42420637)
chr5 (119-175)||(9955314-9955370)
chr5 (118-229)||(26675267-26675379)
chr5 (118-229)||(26946875-26946987)
chr5 (118-174)||(32517871-32517927)
chr5 (118-224)||(28503776-28503883)
chr5 (118-165)||(37853261-37853308)
chr5 (121-175)||(33598337-33598391)
chr5 (119-169)||(35293809-35293859)
chr5 (118-190)||(22579502-22579575)
chr5 (116-228)||(23159026-23159139)
chr5 (106-174)||(463181-463248)
chr5 (175-228)||(2707803-2707858)
chr5 (121-161)||(4438693-4438733)
chr5 (126-174)||(9607154-9607202)
chr5 (118-162)||(39195060-39195104)
[»] scaffold0050 (1 HSPs)
scaffold0050 (116-230)||(81290-81405)
[»] scaffold0384 (1 HSPs)
scaffold0384 (121-198)||(7607-7685)
[»] scaffold0003 (1 HSPs)
scaffold0003 (121-208)||(329037-329125)


Alignment Details
Target: chr6 (Bit Score: 532; Significance: 0; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 532; E-Value: 0
Query Start/End: Original strand, 1 - 544
Target Start/End: Original strand, 19264603 - 19265146
Alignment:
Q  1 ttttaagattttacgccagattatattgtaaaggtgcaaagaaaacatgaaatcttgtcccaacaagtgaaaccagtaactatagtgatggaccaaaatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19264603 ttttaagattttacgccagattatattgtaaaggtgcaaagaaaacatgaaatcttgtcccaacaagtgaaaccagtaactatagtgatggaccaaaatg 19264702  T
Q  101 actactttaacatacgggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagagactattgtgactactcgttaca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19264703 actactttaacatacgggactattttgactaacatagtgcataatcagagactattttaaaatttcgatacattagagactattgtgactactcgttaca 19264802  T
Q  201 cattcaaggacgtaaatgactattaccctattttttcattattgtgattgatatggttaaaatgatattgtagttaggaactgatttgatttgttttgat 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  19264803 cattcaaggacgtaaatgactattaccctattttttcattattgtgattgatatggttaaaatgatattgtagttaggaactgatttgatttgtttcgat 19264902  T
Q  301 tatttttctggtttttcttgagtaaagcataatttgacaatatatcattgattctaggtgtgaacttgtcactgctttcacgtgtcatgtcatcaaggct 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19264903 tatttttctggtttttcttgagtaaagcataatttgacaatatatcattgattctaggtgtgaacttgtcactgctttcacgtgtcatgtcatcgaggct 19265002  T
Q  401 ttctcgcggaacctacaatggcggtcttctgtctaccgaggccggaacaattgctagagtaattgctgatgctaccattaccttggctggatttttgggt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19265003 ttctcgcggaacctacaatggcggtcttctgtctaccgaggccggaacaattgctagagtaattgctgatgctaccattaccttggctggatttttgggt 19265102  T
Q  501 caaagtaggctccttaatgtcaccttgcttccttcactcttcat 544  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  19265103 caaagtaggctccttaatgtcaccttgcttccttcactcttcat 19265146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 118 - 228
Target Start/End: Original strand, 10067719 - 10067830
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||| ||||| | | || ||||||||||||||||||||||||||| |||| |||||||||||||  |||| ||||||||||||| |||  |||    
T  10067719 gactattttgattaacaaaatacacaatcagagactattttaaaatttcgatacattgagagactattgtggttacttgttacacattcaaagactaaaa 10067818  T
Q  217 tgactattaccc 228  Q
    ||||||||||||    
T  10067819 tgactattaccc 10067830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 9436738 - 9436820
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttac 199  Q
    ||||||| ||| |||||||||||| |||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  9436738 gactattctgaataacatagtgcacaatcagtgactattttaaaatttcgatccattgagagactattgtgactactcgttac 9436820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 10219645 - 10219536
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta-gagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||||||||| |||||| ||||||  |||||||| |||||||||  ||||| | |||||||||| |||||||||||||||||| ||||  |||    
T  10219645 gactattttgactaacaaagtgcacaatcaggaactattttgaaatttcgacacattaagggactattgtggctactcgttacacattcagggaccaaaa 10219546  T
Q  217 tgactattac 226  Q
    ||||||||||    
T  10219545 tgactattac 10219536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 33806758 - 33806649
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattaga-gactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||||||||| ||| ||||||||  |||||||||| ||||||||| ||||| | || |||||||||||||| ||||||||||| ||||  |||    
T  33806758 gactattttgactaacaaagtacataatcaatgactattttagaatttcgatacattaaaggattattgtgactactccttacacattcatggactaaaa 33806659  T
Q  217 tgactattac 226  Q
    | ||||||||    
T  33806658 taactattac 33806649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 118 - 228
Target Start/End: Original strand, 515990 - 516101
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta-gagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||||||||  |||||| |||||  |||||||||  ||||||||| ||| | |  ||| |||||||||||||||||||||||| ||||  |||    
T  515990 gactattttgactaacgaagtgcacaatcattgactattttggaatttcgatacatcaagttactgttgtgactactcgttacacattcagggaccaaaa 516089  T
Q  217 tgactattaccc 228  Q
    ||||||||||||    
T  516090 tgactattaccc 516101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 34937534 - 34937447
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagaga-ctattgtgactactcgttacacattcaa 207  Q
    ||||||||||||| ||||||| |||| || | |||||| |||||| ||| ||||  ||| ||||||||||||||||||||||||||||    
T  34937534 tattttgactaacttagtgcacaatcggataatattttgaaatttggatacattgaagaactattgtgactactcgttacacattcaa 34937447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 20565773 - 20565877
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatga 219  Q
    ||||||||||| |  |||| | |||||||||||||||||||| |||||| |||| |  ||||||| |||||||||||| | ||||||||||   ||||||    
T  20565773 tattttgactagcgaagtggacaatcagagactattttaaaaattcgatacattgatggactattatgactactcgttgc-cattcaaggaacaaaatga 20565871  T
Q  220 ctatta 225  Q
    ||||||    
T  20565872 ctatta 20565877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 25085083 - 25085171
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattc 205  Q
    ||||||||||||||||| |||||| ||||| | | ||||||||||||| ||| |||| ||  |||||| ||| ||||| ||||||||||    
T  25085083 gactattttgactaacaaagtgcacaatcaaaaagtattttaaaattttgatacattaaggtactattatgattactccttacacattc 25085171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 34806713 - 34806669
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||    
T  34806713 tattttaactaacaaagtgcataatcagagtctattttaaaattt 34806669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 6524927 - 6524840
Alignment:
Q  143 aatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatgactattaccct 229  Q
    |||||| |||||||||| |||||  || |||| |||||||||| ||||||||  ||||||||||| ||||  ||||| ||||||||||    
T  6524927 aatcagggactattttagaattttaatacattgagagactattatgactacttattacacattcatggaccaaaatggctattaccct 6524840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 27223786 - 27223680
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatga 219  Q
    |||||||| ||||| |||||| ||||| |   |||||| ||||||| || |||| | ||| |||||| |||||||||||||||||||| |||  |||| |    
T  27223786 tattttgattaacagagtgcacaatcaaatgttattttgaaatttcaatacattcaaagattattgttactactcgttacacattcaaagacaaaaataa 27223687  T
Q  220 ctattac 226  Q
    |||||||    
T  27223686 ctattac 27223680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 9762615 - 9762668
Alignment:
Q  122 attttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta 175  Q
    ||||||||||| |||||||| ||||| | ||||||||||||||| ||| |||||    
T  9762615 attttgactaatatagtgcacaatcaaaaactattttaaaattttgatacatta 9762668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 31315290 - 31315327
Alignment:
Q  128 actaacatagtgcataatcagagactattttaaaattt 165  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  31315290 actaacatagtgcacaatcaaagactattttaaaattt 31315327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 515835 - 515755
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgtt 197  Q
    ||||||||  ||||||||||| || ||  || |||||||||||||||| ||| |||| ||| |||||||||||||| ||||    
T  515835 gactatttcaactaacatagtacacaactagggactattttaaaattttgatacattgagatactattgtgactacccgtt 515755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 9307488 - 9307572
Alignment:
Q  145 tcagagactattttaaaatttcgatgcattagag-actattgtgactactcgttacacattcaaggacgtaaatgactattaccc 228  Q
    |||| ||||||||||||||||| || |||| | | || ||| | ||||||||||||||||||| ||||  ||||||||| |||||    
T  9307488 tcagggactattttaaaatttcaatacattggggtaccattataactactcgttacacattcagggactaaaatgactagtaccc 9307572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 28748036 - 28748080
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    |||||||||||||| | | |||||||||| |||||||||||||||    
T  28748036 tattttgactaacaaaattcataatcagatactattttaaaattt 28748080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 3e-31; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 363 - 544
Target Start/End: Complemental strand, 44980613 - 44980432
Alignment:
Q  363 aacttgtcactgctttcacgtgtcatgtcatcaaggctttctcgcggaacctacaatggcggtcttctgtctaccgaggccggaacaattgctagagtaa 462  Q
    ||||| || ||||| |||||||| |||||||||||||||||||| ||||| || ||||| || ||||| ||||| ||||| ||||||||||| ||||| |    
T  44980613 aacttatcgctgctctcacgtgttatgtcatcaaggctttctcgaggaacatataatggagggcttctatctacagaggctggaacaattgcaagagtga 44980514  T
Q  463 ttgctgatgctaccattaccttggctggatttttgggtcaaagtaggctccttaatgtcaccttgcttccttcactcttcat 544  Q
    |||||||||| || |||||| | ||||| |  ||||||   ||||||||||| ||| ||||| |||||||||| ||||||||    
T  44980513 ttgctgatgcaactattacccttgctggctacttgggtgtgagtaggctcctaaatatcaccctgcttccttccctcttcat 44980432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 118 - 228
Target Start/End: Original strand, 6727994 - 6728105
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagag-actattgtgactactcgttacacattcaaggacgtaaa 216  Q
    |||||||||||||||||||||||| |||   ||||||||||  ||||| ||| ||||  || ||||||||||||| |||||||||||||| ||||| |||    
T  6727994 gactattttgactaacatagtgcacaatggaagactattttggaattttgattcattgaaggactattgtgactattcgttacacattcagggacgaaaa 6728093  T
Q  217 tgactattaccc 228  Q
    ||||||| ||||    
T  6728094 tgactatcaccc 6728105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 225
Target Start/End: Original strand, 32669976 - 32670086
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagag-actattgtgactactcgttacacattcaaggacgta 214  Q
    |||||||||||| ||||||||||||| |||| | ||| | ||| |||||||||| ||||  || |||||||||| ||||||||||||||||| |||   |    
T  32669976 gggactattttgcctaacatagtgcacaatccgggacaagtttgaaatttcgatccattgaaggactattgtgaatactcgttacacattcagggatcaa 32670075  T
Q  215 aatgactatta 225  Q
    |||||||||||    
T  32670076 aatgactatta 32670086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 42219947 - 42220037
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagagactattgtgactactcgttacacattcaa 207  Q
    ||||| ||||||||||||| ||||||||||| | ||||||||||||| || || |||||  |||||||||||||| | |||||| ||||||    
T  42219947 ggacttttttgactaacatggtgcataatcaaaaactattttaaaatatcaattcattaaggactattgtgactaattgttacatattcaa 42220037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 226
Target Start/End: Complemental strand, 39162514 - 39162405
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagag-actattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||||||||||| |||  ||||| | |||||||| ||||||| || ||||  || |||||||||| ||||| |||| |||||||||||  |||    
T  39162514 gactattttgactaacataatgcgcaatcaaaaactattttgaaatttcaatacattgaagtactattgtgattactcattacgcattcaaggaccaaaa 39162415  T
Q  217 tgactattac 226  Q
    ||||||||||    
T  39162414 tgactattac 39162405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 50804351 - 50804262
Alignment:
Q  141 ataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatgactattaccct 229  Q
    |||||||  |||||||||||||||| ||  |||| | ||||||||||||| |||||||||||||||||||||  |||| |||||||||||    
T  50804351 ataatcatggactattttaaaattttgacacattcaaagactattgtgaccactcgttacacattcaaggactaaaataactattaccct 50804262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 14926392 - 14926308
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacac 201  Q
    ||||| |||||||||||||||||| ||||||  |||||||||||||||  || |||| ||||||||||||| |||||| ||||||    
T  14926392 gactactttgactaacatagtgcacaatcagtaactattttaaaattttcatacattcagagactattgtgcctactccttacac 14926308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 209
Target Start/End: Complemental strand, 33747377 - 33747285
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagaga-ctattgtgactactcgttacacattcaagg 209  Q
    ||||||||||||||||  |||||| ||||| | ||| |||| |||||||||| ||||  ||| |||||||||||||| |||||||||||||||    
T  33747377 gactattttgactaacgaagtgcagaatcaaatactgttttgaaatttcgatacattgaagaactattgtgactacttgttacacattcaagg 33747285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 27900727 - 27900620
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||||||  | |||||| |||||| |||||||||||||||| ||| |||| |||||||||||| |||| || ||| | ||||||||||  ||     
T  27900727 gactattttgactattagagtgcacaatcagggactattttaaaattttgatacattaagagactattgtaactattctttatatattcaaggaccaaag 27900628  T
Q  217 tgactatt 224  Q
    ||||||||    
T  27900627 tgactatt 27900620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 224
Target Start/End: Original strand, 30050592 - 30050699
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||||||||| | |||||||||| |||||||||| |||||||||| |||| || ||||||| || ||| || ||||| |||||| |||  |||    
T  30050592 gactattttgactaacaaattgcataatcatagactattttgaaatttcgatacattaagggactattttggctaatcattacaaattcaaagaccaaaa 30050691  T
Q  217 tgactatt 224  Q
    | ||||||    
T  30050692 taactatt 30050699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 228
Target Start/End: Original strand, 34177483 - 34177594
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||||||||||| |||| |||||  ||||||||| ||||||| |  |||| |  |||||||||  |||||| ||||||||||| ||||  |||    
T  34177483 gactattttgactaacataatgcacaatcatggactattttgaaatttcaaatcattgaaggactattgtagctactcattacacattcagggaccaaaa 34177582  T
Q  217 tgactattaccc 228  Q
    ||||||||||||    
T  34177583 tgactattaccc 34177594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 32669833 - 32669783
Alignment:
Q  177 agactattgtgactactcgttacacattcaaggacgtaaatgactattacc 227  Q
    |||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  32669833 agactattgtgactactcgttacacattcatggaccaaaatgactattacc 32669783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 31134720 - 31134833
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta-gagactattgtgactactcgttacacattcaaggacgta 214  Q
    ||||||||||||| |||||||||||| |||||   ||| ||||  |||||  || ||||  | |||||| |||||||||||||||||||||| ||||  |    
T  31134720 gggactattttgattaacatagtgcacaatcaatcactcttttggaatttttatacattttgggactatcgtgactactcgttacacattcagggaccaa 31134819  T
Q  215 aatgactattaccc 228  Q
    ||||||||||||||    
T  31134820 aatgactattaccc 31134833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 5529869 - 5529952
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattaga-gactattgtgactactcgttacac 201  Q
    |||||||||||||||| |||||||||| || || ||||||||||||| |||  |||| | || |||| ||||||||||||||||    
T  5529869 actattttgactaacaaagtgcataattagggattattttaaaattttgatatattaaaggattattatgactactcgttacac 5529952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 228
Target Start/End: Complemental strand, 27463833 - 27463722
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||||||||| |||||| ||| ||||||||||||| |||||  || |||| ||||| || ||||||||||  |||||||| ||| |||  |||    
T  27463833 gactattttgactaacaaagtgcaaaattagagactattttagaattttaatacattgagagaataatgtgactacttattacacatccaatgaccaaaa 27463734  T
Q  217 tgactattaccc 228  Q
    | | ||||||||    
T  27463733 taattattaccc 27463722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 19464323 - 19464229
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagag-actattgtgactactcgttacacattcaaggac 211  Q
    ||||||||||||||||  ||||   |||||||||| ||||| |||||| ||| ||||  || ||||||||||||||| |||||||||| ||||||    
T  19464323 gactattttgactaacggagtgttcaatcagagaccatttttaaattttgatacattgaaggactattgtgactacttgttacacatttaaggac 19464229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 2261989 - 2261953
Alignment:
Q  138 tgcataatcagagactattttaaaatttcgatgcatt 174  Q
    |||||||||||||||||||||||||||||||| ||||    
T  2261989 tgcataatcagagactattttaaaatttcgatacatt 2261953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 30519146 - 30519042
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgca-ttagagactattgt-gactactcgttacacattcaaggacgtaa 215  Q
    ||||||||||||  | | |||| | |||||||||||||||| |||||||||| || |||  ||||||||| ||||| | |||||||||||||||||  ||    
T  30519146 gactattttgacatataaagtgtacaatcagagactattttgaaatttcgatacatttaaggactattgtggactatttgttacacattcaaggaccaaa 30519047  T
Q  216 atgac 220  Q
    |||||    
T  30519046 atgac 30519042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 9890694 - 9890785
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattca 206  Q
    ||||||||||||||||||| |||||| |||||    |||||||| |||||  || |||| |||||||||||||| || ||||| ||||||||    
T  9890694 gggactattttgactaacaaagtgcaaaatcatgatctattttagaattttaatacattgagagactattgtgattaatcgttccacattca 9890785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 16192262 - 16192353
Alignment:
Q  138 tgcataatcagagactattttaaaatttcgatgcattagag-actattgtgactactcgttacacattcaaggacgtaaatgactattaccc 228  Q
    |||| ||||||| ||||||||||||||| ||| ||||  || | |||| |||||||| |||||||||||||| ||  |||||||||| ||||    
T  16192262 tgcacaatcagaaactattttaaaattttgatacattgaaggaatattatgactacttgttacacattcaagtactaaaatgactatcaccc 16192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 29795258 - 29795305
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    ||||||||||| |||||||||||| ||||| | |||||||||||||||    
T  29795258 gactattttgattaacatagtgcacaatcaaatactattttaaaattt 29795305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 38445185 - 38445256
Alignment:
Q  136 agtgcataatcagagactattttaaaatttcgatgcattaga-gactattgtgactactcgttacacattca 206  Q
    |||||| ||||| ||||||||||| ||||||||| ||||| | |||||||||||||| | ||| ||||||||    
T  38445185 agtgcacaatcaaagactattttagaatttcgatacattaaaggactattgtgactatttgttgcacattca 38445256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 39330030 - 39329983
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    ||||||||||||||||||| |||||||| || || |||||||||||||    
T  39330030 gactattttgactaacataatgcataattagtgaatattttaaaattt 39329983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 40193067 - 40193114
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcga 168  Q
    ||||||||||||||||||||  ||||| | ||||||||||||||||||    
T  40193067 tattttgactaacatagtgcgcaatcaaaaactattttaaaatttcga 40193114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 207
Target Start/End: Complemental strand, 5529714 - 5529624
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaa 207  Q
    ||||||||||||||||| |  ||| |||||||||||||||||||| || |||  ||| |  ||||| |||||| |||| ||||||||||||    
T  5529714 gactattttgactaacaaatcgcacaatcagagactattttaaaactttgatatattgaaggactactgtgacaactccttacacattcaa 5529624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 27900900 - 27900994
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagag-actattgtgactactcgttacacattcaagga 210  Q
    ||||||||| |||||||  | |||| ||||| ||||||||||||| |||  || ||||  || |||||| ||||||||| |||||||||||||||    
T  27900900 ggactatttcgactaactaattgcacaatcatagactattttaaattttttatacattgaaggactattctgactactcattacacattcaagga 27900994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 10018779 - 10018722
Alignment:
Q  150 gactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattca 206  Q
    |||||||||||||||| ||| |||| | ||||||||||||||||| |||||| |||||    
T  10018779 gactattttaaaattttgatacattgatagactattgtgactactggttacatattca 10018722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 27463906 - 27464015
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaat 217  Q
    ||||||||| |||||  |||||| || ||||||||||||| |||||| ||| |||| |||||||| | ||  ||||| ||||||||| | ||||   |||    
T  27463906 actattttgtctaacgaagtgcacaaccagagactattttgaaattttgatacattgagagactagtatggttactccttacacatttagggaccacaat 27464005  T
Q  218 gactattacc 227  Q
    ||||||||||    
T  27464006 gactattacc 27464015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 2998954 - 2998898
Alignment:
Q  151 actattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattca 206  Q
    ||||||||||||||| ||| |||| | |||||||||||| |||| ||||||||||||    
T  2998954 actattttaaaattttgatacatttacagactattgtgattacttgttacacattca 2998898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 28623875 - 28623931
Alignment:
Q  152 ctattttaaaatttcgatgcattagagactattgtgactactcgttacacattcaag 208  Q
    |||||||||| ||| ||||||| || | | |||||| ||||||||||||||||||||    
T  28623875 ctattttaaagttttgatgcataagggtcaattgtgcctactcgttacacattcaag 28623931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 33746844 - 33746816
Alignment:
Q  181 tattgtgactactcgttacacattcaagg 209  Q
    |||||||||||||||||||||||||||||    
T  33746844 tattgtgactactcgttacacattcaagg 33746816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 206
Target Start/End: Complemental strand, 50155606 - 50155530
Alignment:
Q  130 taacatagtgcataatcagagactattttaaaatttcgatgcattagagactattgtgactactcgttacacattca 206  Q
    ||||| |||| | ||||| | ||||||||||||||| ||| ||||  | |||||| ||||||||| |||||||||||    
T  50155606 taacaaagtgtacaatcaaaaactattttaaaattttgatacattgaaaactattatgactactcattacacattca 50155530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 52362005 - 52361961
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    |||||||| ||| | |||||| |||||||||||||||||||||||    
T  52362005 tattttgaataataaagtgcaaaatcagagactattttaaaattt 52361961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 4e-30; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 40124373 - 40124258
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagag-actattgtgactactcgttacacattcaaggacgtaa 215  Q
    |||||||||||||||||  |||||| |||||||||| |||||||||||||||| |||||  | |||||||||||||||||||||||||||||||||  ||    
T  40124373 ggactattttgactaacggagtgcacaatcagagaccattttaaaatttcgatacattaatggactattgtgactactcgttacacattcaaggaccaaa 40124274  T
Q  216 atgactattaccctat 231  Q
     |||||||||||||||    
T  40124273 gtgactattaccctat 40124258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 7165744 - 7165831
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacatt 204  Q
    ||||||||| ||||| | |||||| |||||||||||||||||||||||  || |||| | ||||||||||||||||||||||||||||    
T  7165744 gactattttaactaataaagtgcaaaatcagagactattttaaaattttaatacattgaaagactattgtgactactcgttacacatt 7165831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 6788484 - 6788594
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||| ||||||||| |||||| ||||||| ||||||||||||||| ||| |||| |  ||||||| |||||| | |||||||||| ||||| | |||    
T  6788484 gactattctgactaacaaagtgcacaatcagaaactattttaaaattttgatacattgaatgactattatgactatttgttacacatttaaggatgaaaa 6788583  T
Q  217 tgactattacc 227  Q
    |||||||||||    
T  6788584 tgactattacc 6788594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 212
Target Start/End: Original strand, 18903171 - 18903264
Alignment:
Q  122 attttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgtt--acacattcaaggacg 212  Q
    ||||||| |||||||||||| ||||||| ||||||||| ||||||||| |||| |  ||||||||||||||||||||  |||||||||||||||    
T  18903171 attttgattaacatagtgcacaatcagaaactattttagaatttcgatacattgaatgactattgtgactactcgttacacacattcaaggacg 18903264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 20167590 - 20167700
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    |||||||||| |||||| |||| | |||||| || ||||||  ||||| |||||||| || |||||||||||||||| |||||||||| || |||  |||    
T  20167590 gactattttgtctaacaaagtgtacaatcagggaatattttgcaattttgatgcattgagtgactattgtgactacttgttacacatttaaagaccaaaa 20167689  T
Q  217 tgactattacc 227  Q
    |||||||||||    
T  20167690 tgactattacc 20167700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 34884006 - 34883934
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgac 189  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||||| ||| |||| || ||||||||||||    
T  34884006 gactattttgactaacagagtgcacaattagagactattttaaaattttgatacattgagggactattgtgac 34883934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 220
Target Start/End: Original strand, 14441108 - 14441207
Alignment:
Q  122 attttgactaacatagtgcataatcagagactattttaaaatttcgatgc-attagagactattgtgactactcgttacacattcaaggacgtaaatgac 220  Q
    ||||||| ||||||| |||||||||| | ||||||||||||||||||| | || ||||| ||||||   ||||| ||||||||||||||| | |||||||    
T  14441108 attttgattaacataatgcataatcatatactattttaaaatttcgatacaatgagagattattgtatttactcattacacattcaaggatgaaaatgac 14441207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 19206503 - 19206557
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta 175  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| ||| |||||    
T  19206503 tattttgactaacaaagtgcataatcagaaactattttaaaattttgatacatta 19206557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 20966214 - 20966261
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  20966214 gactattttgactaacaaagtgcacaatcaaagactattttaaaattt 20966261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 15301604 - 15301677
Alignment:
Q  138 tgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaagga 210  Q
    |||| ||||||||| |||||| |||||||||| |||| |||||| ||||||| || |||||||||||| |||||    
T  15301604 tgcacaatcagagattattttgaaatttcgatacattgagagacgattgtgattagtcgttacacatttaagga 15301677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 17742568 - 17742523
Alignment:
Q  120 ctattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    ||||||| ||||||| |||||| |||||||||||||||||||||||    
T  17742568 ctattttaactaacaaagtgcaaaatcagagactattttaaaattt 17742523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 23359452 - 23359364
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattaga--gactattgtgactactcgttacacatt 204  Q
    |||||||||||||||| |||| || ||||| ||||||| ||| |||||| || || | ||  |||||||||||||| ||||||||||||    
T  23359452 gactattttgactaacgtagtacacaatcatagactatattataatttcaatacaattgaaggactattgtgactattcgttacacatt 23359364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 2687157 - 2687204
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    ||||||||||||||||||| | || ||||| |||||||||||||||||    
T  2687157 gactattttgactaacataatacaaaatcaaagactattttaaaattt 2687204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 120 - 198
Target Start/End: Complemental strand, 20966122 - 20966043
Alignment:
Q  120 ctattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgtta 198  Q
    ||||||||||||||| |||||| ||||| || ||||||||||||||  ||  ||| |||||||||| | |||||||||||    
T  20966122 ctattttgactaacaaagtgcaaaatcataggctattttaaaattttaatagattgagagactattatcactactcgtta 20966043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 12676486 - 12676432
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta 175  Q
    |||||||||||||  |||||| ||||| |||||||||||| |||||||| |||||    
T  12676486 tattttgactaactaagtgcacaatcatagactattttaacatttcgatacatta 12676432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 35150423 - 35150369
Alignment:
Q  151 actattttaaaatttcgatgcatt-agagactattgtgactactcgttacacatt 204  Q
    ||||||||||||||| |||||||| ||||||||||||  ||||| ||||||||||    
T  35150423 actattttaaaattttgatgcattgagagactattgtagctacttgttacacatt 35150369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 18903049 - 18902941
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgta 214  Q
    |||||||||||||| |||| ||  || ||||||  ||||||||| ||||||| | |||| | ||||||| ||| ||| || ||||||||||| ||||| |    
T  18903049 gggactattttgaccaacacagcacacaatcagt-actattttagaatttcggtacattgaaagactatcgtggctaatcattacacattcagggacgaa 18902951  T
Q  215 aatgactatt 224  Q
    ||||||||||    
T  18902950 aatgactatt 18902941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 165
Target Start/End: Complemental strand, 42657846 - 42657809
Alignment:
Q  128 actaacatagtgcataatcagagactattttaaaattt 165  Q
    |||||||||||||||||||||| | |||||||||||||    
T  42657846 actaacatagtgcataatcagatattattttaaaattt 42657809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 204
Target Start/End: Complemental strand, 18858074 - 18857990
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacatt 204  Q
    ||||||||||||||  || || ||||| |  ||||||||||||||||||  ||| | ||||||||| |||||||||||| |||||    
T  18858074 tattttgactaacagtgtacacaatcataatctattttaaaatttcgatatattaaaagactattgcgactactcgttatacatt 18857990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 20360404 - 20360316
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaa-aatttcgatgcatt-agagactattgtgactactcgttacacatt 204  Q
    ||||||||||||||||| |||| | || |||  ||||||||   ||||| |||||||| || ||||||||||||||||||||| |||||    
T  20360404 gactattttgactaacaaagtgtacaaccaggaactatttttgcaattttgatgcattgagtgactattgtgactactcgttagacatt 20360316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 34549452 - 34549396
Alignment:
Q  172 attagagactattgtgactactcgttacacattcaaggacgtaaatgactattaccc 228  Q
    |||||| |||||||||||||||| ||||||||| ||  ||| |||||| ||||||||    
T  34549452 attagaaactattgtgactactcattacacatttaaaaacgaaaatgagtattaccc 34549396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 4e-24; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 117 - 221
Target Start/End: Complemental strand, 14669342 - 14669237
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaa 215  Q
    ||||||||||||||||||||||||| |||||||||||||||| | ||||||||  ||| || || | |||||||||||||||||||||||||||||  ||    
T  14669342 ggactattttgactaacatagtgcacaatcagagactattttgatatttcgattaattgagggattgttgtgactactcgttacacattcaaggaccaaa 14669243  T
Q  216 atgact 221  Q
    ||||||    
T  14669242 atgact 14669237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 38838646 - 38838757
Alignment:
Q  120 ctattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatg 218  Q
    ||||||||||||||| | |||| |||||||||||||||||||||||  || |||| | ||| |||||||||||||||||||||||||| ||||  ||||     
T  38838646 ctattttgactaacaaaatgcaaaatcagagactattttaaaattttaatacattgatagaatattgtgactactcgttacacattcagggaccaaaata 38838745  T
Q  219 actattacccta 230  Q
    | ||||||||||    
T  38838746 attattacccta 38838757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 8062886 - 8062984
Alignment:
Q  136 agtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatgactattaccctattt 233  Q
    |||||| ||||||| |||||||||||||||  || |||| | |||||||||||||||||||||||||||||||||||  |||| ||||||||| |||||    
T  8062886 agtgcaaaatcagatactattttaaaattttaatacattgacagactattgtgactactcgttacacattcaaggaccaaaataactattaccatattt 8062984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 32996500 - 32996608
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||| ||||| |||||| ||||||||||||||||| ||||| |||||||| || ||||||||| |||| || ||| ||||||||||||  |||    
T  32996500 gactattttgattaacaaagtgcacaatcagagactattttagaattttgatgcattgagggactattgtcactattcattagacattcaaggaccaaaa 32996599  T
Q  217 tgactatta 225  Q
    |||| ||||    
T  32996600 tgaccatta 32996608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 227
Target Start/End: Original strand, 40355068 - 40355178
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| |   || |  |||||||   |||||||||||||||||||| |||  |||    
T  40355068 gactattttgactaacatagtgcacaatcagagactattttcaaatttcggtatgttgaacgactattacaactactcgttacacattcaaagaccaaaa 40355167  T
Q  217 tgactattacc 227  Q
    |||||||||||    
T  40355168 tgactattacc 40355178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 12849716 - 12849807
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaag 208  Q
    |||||||| |||||||| |||||| ||||||||||||||||  ||||| ||| |||| | |||||||||||||||||| || ||||||||||    
T  12849716 gactatttcgactaacaaagtgcacaatcagagactattttgtaattttgatacattaaaagactattgtgactactcattgcacattcaag 12849807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 46720016 - 46720128
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaat 217  Q
    |||||||||||||||| |||||| ||||| | || ||||||||||||| || |||| || |||||||||||||||| ||||  |||||| | ||   |||    
T  46720016 actattttgactaacaaagtgcacaatcaaataccattttaaaatttcaatacattgagggactattgtgactacttgttattcattcaggaaccataat 46720115  T
Q  218 gactattacccta 230  Q
    |||||||||||||    
T  46720116 gactattacccta 46720128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 230
Target Start/End: Complemental strand, 3399987 - 3399874
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattaga-gactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||||| ||||| | || ||||||||| |||||| |||||||||| ||||| | || || | |||||| | |||| ||||||||||||  |||    
T  3399987 gactattttgactcacataattcacaatcagagattattttcaaatttcgatacattaaaggagtaatttgactaattgttaaacattcaaggactaaaa 3399888  T
Q  217 tgactattacccta 230  Q
    ||||||||| ||||    
T  3399887 tgactattatccta 3399874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 235
Target Start/End: Complemental strand, 5358314 - 5358197
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaat 217  Q
    |||||||||||||| | ||| || ||||||||||||||||||||||| ||| |||| |  ||||||||| |||| || ||||||||| | ||| | || |    
T  5358314 actattttgactaatagagtacacaatcagagactattttaaaattttgatacattgaaggactattgtaactattcattacacatttagggatgaaagt 5358215  T
Q  218 gactattaccctattttt 235  Q
    |||||||| || ||||||    
T  5358214 gactattatcccattttt 5358197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 208
Target Start/End: Complemental strand, 25689065 - 25688972
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaag 208  Q
    ||||||||||| ||||||| |||||| ||||||| | ||||||| |||||  || |||| |||||||||||||| || || |||||||||||||    
T  25689065 gggactattttaactaacaaagtgcaaaatcagaaattattttagaattttaatacattgagagactattgtgattattcattacacattcaag 25688972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 6983380 - 6983273
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatga 219  Q
    |||||||||||||||| |||| |||| | ||||| |||||||||| ||| |||| |  ||||||||||  ||||| |||||||| || ||||  ||||||    
T  6983380 tattttgactaacataatgcacaatcggggactactttaaaattttgattcattgaaggactattgtggttactctttacacatccatggactaaaatga 6983281  T
Q  220 ctattacc 227  Q
    ||||||||    
T  6983280 ctattacc 6983273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 34703736 - 34703618
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    |||||||||||  |||  |||| | ||| ||||||||||||||||||| ||| |||| |  ||||||||||||||||||||| ||||| | |||   |||    
T  34703736 gactattttgatcaacgaagtgaacaattagagactattttaaaattt-gatacattgatggactattgtgactactcgttatacatttatggatcaaaa 34703638  T
Q  217 tgactattaccctatttttt 236  Q
    |||||||||| |||||||||    
T  34703637 tgactattactctatttttt 34703618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 23457654 - 23457609
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttc 166  Q
    ||||| |||||||||| |||||||||| ||||||||||||||||||    
T  23457654 tatttagactaacataatgcataatcatagactattttaaaatttc 23457609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 23533114 - 23533159
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttc 166  Q
    ||||| |||||||| | |||||||||||||||||||||||||||||    
T  23533114 tatttagactaacaaaatgcataatcagagactattttaaaatttc 23533159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 1247603 - 1247512
Alignment:
Q  120 ctattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta-gagactattgtgactactcgttacacattcaaggac 211  Q
    ||||||||| || || || ||| ||||| |||||||||||||||||  || ||||| || |||||||||||||||||||||| ||||| ||||    
T  1247603 ctattttgattagcaaagcgcaaaatca-agactattttaaaattttaatacattaagaaactattgtgactactcgttacatattcagggac 1247512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 5198011 - 5197963
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaatt 164  Q
    ||||||||||||||||||| |||||| ||| ||| ||||||||||||||    
T  5198011 gggactattttgactaacaaagtgcaaaatgagaaactattttaaaatt 5197963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 8929560 - 8929512
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    |||||||||||||||||| |||||| ||||| | |||||||||||||||    
T  8929560 ggactattttgactaacaaagtgcaaaatcaaaaactattttaaaattt 8929512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 18942810 - 18942734
Alignment:
Q  153 tattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatgactattaccc 228  Q
    ||||||||||||| ||| |||| || ||||||| |||||| || ||||||||||| ||||  |||||||||||||||    
T  18942810 tattttaaaattttgatacattgagtgactattatgactattccttacacattcagggaccaaaatgactattaccc 18942734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 471
Target Start/End: Complemental strand, 28809541 - 28809457
Alignment:
Q  387 atgtcatcaaggctttctcgcggaacctacaatggcggtcttctgtctaccgaggccggaacaattgctagagtaattgctgatg 471  Q
    ||||||||||||||||||||||||||||| || || ||  | ||||| ||||| ||||||||  | ||| |||||||||| ||||    
T  28809541 atgtcatcaaggctttctcgcggaacctataacggaggattactgtcaaccgaagccggaactctagctcgagtaattgcagatg 28809457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 39608612 - 39608692
Alignment:
Q  151 actattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatgactattacccta 230  Q
    ||||||||||||||| ||| |||| | | |||||||| ||||||| ||||||||||||||||  |||||| ||||| ||||    
T  39608612 actattttaaaattttgatacattgaaaaactattgtaactactccttacacattcaaggactaaaatgattattatccta 39608692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 10228808 - 10228708
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-------agagactattgtgactactcgttacacattcaagga 210  Q
    ||||||||||||||||  | |||| ||||| |||||||||| |||||||||| ||||       || || |||||||| |||||||| ||||||||||||    
T  10228808 gactattttgactaacgaattgcacaatcaaagactattttgaaatttcgatacatttacattaagggattattgtgaatactcgttgcacattcaagga 10228709  T
Q  211 c 211  Q
    |    
T  10228708 c 10228708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 23474781 - 23474819
Alignment:
Q  128 actaacatagtgcataatcagagactattttaaaatttc 166  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  23474781 actaacaaaatgcataatcagagactattttaaaatttc 23474819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 29196865 - 29196767
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactat----tttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggac 211  Q
    ||||||||||||||| | ||| || ||| |||||||||    |||||||||| ||| |||| | | ||||||||||||| ||||||||||||| |||||    
T  29196865 gactattttgactaataaagtacacaattagagactatatattttaaaattttgatacattgaaaaactattgtgactattcgttacacattcgaggac 29196767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 46719886 - 46719829
Alignment:
Q  108 taacatacgggactattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    ||||||| | ||||||||||| ||||||| |||| ||||||| |||||||| ||||||    
T  46719886 taacataagagactattttgattaacataatgcacaatcagaaactattttgaaattt 46719829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 207
Target Start/End: Complemental strand, 5362354 - 5362262
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgca-ttagagactattgtgactactcgttacacattcaa 207  Q
    ||||||||||||||||||| | | || |||||   |||||||| |||||||||| || | ||||||| ||||| |||||  ||||||||||||    
T  5362354 gggactattttgactaacaaattacacaatcatgaactattttgaaatttcgatacactaagagactgttgtggctacttattacacattcaa 5362262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 220
Target Start/End: Original strand, 11459008 - 11459112
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattaga-gactattgtgactactcgttacacattcaaggacgtaa 215  Q
    |||||||||||||||||  | |||| |||||  |||||||||  ||||||  | |||| || |||||||| | ||||||||| |||||||| ||||| ||    
T  11459008 ggactattttgactaacggaatgcacaatcaaggactattttgtaatttctctacattggaggactattgcggctactcgttgcacattcagggacgaaa 11459107  T
Q  216 atgac 220  Q
    |||||    
T  11459108 atgac 11459112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 37502274 - 37502186
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattca 206  Q
    |||||||||| ||||||| ||||||||||  || ||||||||||||| |||  ||| | ||| |||||||  || ||||||||||||||    
T  37502274 actattttgattaacataatgcataatcattgattattttaaaattttgatatattaaaagattattgtggttattcgttacacattca 37502186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 4586857 - 4586745
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta-gagactattgtgactactcgttacacattcaaggacgtaaat 217  Q
    |||||||||||||||  |||||| ||||| |||||||||||||||||  || ||||| ||||||||||| |||||||||||||||||||||||   ||||    
T  4586857 actattttgactaacgaagtgcaaaatcatagactattttaaaattttaatacattaagagactattgtaactactcgttacacattcaaggatcaaaat 4586758  T
Q  218 gactattacccta 230  Q
     ||||||||||||    
T  4586757 aactattacccta 4586745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 106 - 211
Target Start/End: Original strand, 28929511 - 28929616
Alignment:
Q  106 tttaacatacgggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagagactattgtgactactcgttacacattc 205  Q
    ||||||||||  ||||||||||||||||  |||||||||||||| |||||| | |||||||||| ||||  | |||||||||  ||||||||||| |||     
T  28929511 tttaacatacatgactattttgactaacgaagtgcataatcagaaactattatgaaatttcgatacatttaaaactattgtggttactcgttacatattt 28929610  T
Q  206 aaggac 211  Q
    ||||||    
T  28929611 aaggac 28929616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 13003001 - 13002958
Alignment:
Q  122 attttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  13003001 attttgactaacatagtgcataatcaaagactattttaaaattt 13002958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 6915354 - 6915266
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaa 207  Q
    |||||||||||||||||| | |||| |||||| |||  |||| ||||||||||||||| ||||||   |||||||||| |||||||||||||    
T  6915354 ggactattttgactaacaaaatgcacaatcagggaccgttttgaaatttcgatgcattgagagac---tgtgactacttgttacacattcaa 6915266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 17488193 - 17488302
Alignment:
Q  120 ctattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatg 218  Q
    |||||||||| |||||| | || |||||  ||||||||| |||||||| | |||| || |||||||||||||||| |||||||||||| |||   |||||    
T  17488193 ctattttgaccaacataattcacaatcaaggactattttgaaatttcgctacattgagggactattgtgactacttgttacacattcagggagcaaaatg 17488292  T
Q  219 actattaccc 228  Q
    ||| ||||||    
T  17488293 actgttaccc 17488302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 34281439 - 34281395
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    |||||||||||||||||||||||||||  ||||||||||||||||    
T  34281439 tattttgactaacatagtgcataatcaaggactattttaaaattt 34281395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 41303146 - 41303205
Alignment:
Q  115 cgggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt 174  Q
    ||||||||||||||||| || ||||||||||||  |||||||||||||||| ||| ||||    
T  41303146 cgggactattttgactagcaaagtgcataatcaatgactattttaaaattttgatacatt 41303205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 2987142 - 2987251
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaa 215  Q
    ||||||||  ||||||||||||    ||||||||||||||||||||||| ||| |||| ||| ||||||||||||| ||||| |||||| | | ||  ||    
T  2987142 ggactattccgactaacatagtttccaatcagagactattttaaaattttgatacattgaga-actattgtgactaatcgtttcacatttaggaaccaaa 2987240  T
Q  216 atgactattac 226  Q
    |||||||||||    
T  2987241 atgactattac 2987251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 9598069 - 9598163
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattaga-gactattgtgactactcgttacacattcaaggac 211  Q
    ||||||||||| |||   |||||||||||| | | |||||||| |||||||||||||| | || ||||||| ||||| | |||||||||||||||    
T  9598069 gactattttgattaatgaagtgcataatcaaaaattattttaagatttcgatgcattaaaggattattgtggctacttgctacacattcaaggac 9598163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 6915514 - 6915599
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagagactattgtgactactcgttacacatt 204  Q
    |||||||||| ||||||| |||| ||||| | | ||||||||||||| ||| |||||  ||||||||||| ||||  |||||||||    
T  6915514 actattttgattaacataatgcacaatcaaaaattattttaaaattttgatacattaaggactattgtgattacttattacacatt 6915599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 206
Target Start/End: Original strand, 7574617 - 7574718
Alignment:
Q  106 tttaacatacgggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacatt 204  Q
    ||||||||| |  |||||||||| |||||||||||| |||||  ||||||||||| ||| |||| | || |||||||||||||  ||||| ||| |||||    
T  7574617 tttaacataggaaactattttgaataacatagtgcacaatcaacgactattttaatattacgatacgttgagagactattgtggttactccttaaacatt 7574716  T
Q  205 ca 206  Q
    ||    
T  7574717 ca 7574718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 100 - 225
Target Start/End: Original strand, 21145615 - 21145743
Alignment:
Q  100 gactactttaacatacgggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagac--tattgtgactactcgt 196  Q
    ||||| ||||||||  | ||||||||||||||||  |  |||||||| |||||||||||  ||||||||| | || | ||||  ||||||| ||||||||    
T  21145615 gactattttaacatcagagactattttgactaacgaaacgcataatctgagactattttggaatttcgatacgttgatagactatattgtggctactcgt 21145714  T
Q  197 tacacattcaaggacgtaaatgactatta 225  Q
    |||||||||| | ||  ||||||||||||    
T  21145715 tacacattcaggaaccaaaatgactatta 21145743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 21602017 - 21601905
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgta 214  Q
    ||||||| |||||||||||  ||||| ||||||||||||||||  ||||| ||| |||| |  |||||||||||||| | |||||| |||| |||||  |    
T  21602017 gggactactttgactaacaacgtgcacaatcagagactattttggaattttgatacattgatggactattgtgactatttgttacatattc-aggaccaa 21601919  T
Q  215 aatgactattaccc 228  Q
    |||||| |||||||    
T  21601918 aatgaccattaccc 21601905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 18080444 - 18080556
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaa 215  Q
    |||||||||| | |||||||||||| ||||| | | |||||| |||||| ||| |||| |||||||||| ||||||| | ||||| |||||| ||   ||    
T  18080444 ggactattttcaataacatagtgcacaatcaaaaaatattttgaaattttgatacattaagagactattttgactaccccttacatattcaatgattaaa 18080543  T
Q  216 atgactattaccc 228  Q
    |||| ||||||||    
T  18080544 atgattattaccc 18080556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 42660068 - 42660156
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattca 206  Q
    |||||||||||||  | |||||||||||| ||||||||||||||| |  || |||| |||||||||| ||||||||  | |||||||||    
T  42660068 actattttgactacgagagtgcataatcaaagactattttaaaatcttaatacattaagagactattctgactacttatgacacattca 42660156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 8340170 - 8340119
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgat 169  Q
    |||||| ||||||||||||||||| ||||| | ||||||||||||| |||||    
T  8340170 gactatcttgactaacatagtgcacaatcaaaaactattttaaaatctcgat 8340119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 23357386 - 23357472
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta-gagactattgtgactactcgttacacattca 206  Q
    |||||||||||||| |||||| ||| |   ||| |||| |||||| ||| ||||| |||| |||||||||||||| |||||||||||    
T  23357386 tattttgactaacagagtgcacaattaagcactcttttgaaatttagatacattaagagattattgtgactactcattacacattca 23357472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 24017975 - 24017897
Alignment:
Q  150 gactattttaaaatttcgatgcattagaga-ctattgtgactactcgttacacattcaaggacgtaaatgactattacc 227  Q
    ||||||||| |||||||||| || || | | ||||| || ||||||||||||||||||| |||  ||||||||||||||    
T  24017975 gactattttcaaatttcgatacactaaaaaactattatgtctactcgttacacattcaatgactgaaatgactattacc 24017897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 151
Target Start/End: Original strand, 2988350 - 2988383
Alignment:
Q  118 gactattttgactaacatagtgcataatcagaga 151  Q
    |||||||||||||||||||||||||||| |||||    
T  2988350 gactattttgactaacatagtgcataattagaga 2988383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 14532452 - 14532505
Alignment:
Q  153 tattttaaaatttcgatgcatta-gagactattgtgactactcgttacacattc 205  Q
    ||||||||||||| |||  |||| ||||||||||||||||||| ||||||||||    
T  14532452 tattttaaaattttgatatattaagagactattgtgactactcattacacattc 14532505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 33508524 - 33508432
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagagactattgtgactactcgttacacattcaaggac 211  Q
    ||||||||||||||| | ||  |||||||||||||||||||  ||||| ||| |||| | ||||||| ||||||||  |||||| || ||||||    
T  33508524 gactattttgactaataaagcacataatcagagactattttggaattttgatacatttg-gactattatgactacttcttacacgtttaaggac 33508432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 10708612 - 10708656
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    |||||||||||||||| |  ||||||| |||||||||||||||||    
T  10708612 tattttgactaacataatatataatcaaagactattttaaaattt 10708656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 224
Target Start/End: Complemental strand, 35855667 - 35855560
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaa 215  Q
    ||||||||||||| |||  ||| ||| || || |||||||||| |||||||||  ||| ||||||||||||| | ||||||||  ||||| |||||| ||    
T  35855667 ggactattttgaccaacggagtacattattagggactattttagaatttcgatatattgagagactattgtggccactcgttatccattc-aggacgaaa 35855569  T
Q  216 atgactatt 224  Q
    |||| ||||    
T  35855568 atgaatatt 35855560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 118 - 228
Target Start/End: Complemental strand, 12034490 - 12034379
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||||||||| |||  | ||||||||||||||||  ||||| ||| |||| || ||||||||||||||||||||| ||||||| ||||  |||    
T  12034490 gactattttgactaacaaagtatacaatcagagactattttgcaattttgatacattgagggactattgtgactactcgttatacattcagggaccaaaa 12034391  T
Q  217 tgactattaccc 228  Q
    ||||||||||||    
T  12034390 tgactattaccc 12034379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 120 - 229
Target Start/End: Original strand, 35255463 - 35255573
Alignment:
Q  120 ctattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatg 218  Q
    ||||||||||||| | |||||| ||||||| |||||||||||||||  || |||| |||||||||||||||||||||||||| ||| | ||||  ||||     
T  35255463 ctattttgactaataaagtgcaaaatcagatactattttaaaattttaatacattgagagactattgtgactactcgttacatatttagggaccaaaata 35255562  T
Q  219 actattaccct 229  Q
    |||||||||||    
T  35255563 actattaccct 35255573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 120 - 233
Target Start/End: Original strand, 56095201 - 56095315
Alignment:
Q  120 ctattttgactaacatagtgcataatcagagactattttaaaatttcgatgc-attagagactattgtgactactcgttacacattcaaggacgtaaatg 218  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||||  || | || ||| |||||||||||||||||||||||||| | ||||  ||||     
T  56095201 ctattttgactaacaaagtgcaaaatcagagacaattttaaaattttaatacaatgagatactattgtgactactcgttacacattaagggaccaaaata 56095300  T
Q  219 actattaccctattt 233  Q
    | |||||||||||||    
T  56095301 attattaccctattt 56095315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 116 - 225
Target Start/End: Original strand, 51151017 - 51151127
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagact-attgtgactactcgttacacattcaaggacgt 213  Q
    |||||||||||||| |||| |||| | |||||||||||||||||||||||  || |||| ||||| | ||||||||||||||||||||||||||||||      
T  51151017 gggactattttgaccaacagagtgaa-aatcagagactattttaaaattttaatacattgagagatttattgtgactactcgttacacattcaaggacca 51151115  T
Q  214 aaatgactatta 225  Q
    |||| |||||||    
T  51151116 aaataactatta 51151127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 207
Target Start/End: Complemental strand, 46804863 - 46804773
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaa 207  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||||| ||| |||| || ||||||||| ||| ||||||||| ||||||    
T  46804863 gactattttgactaacaaagtgtacaatcagagactattttaaaattttgatacattgagggactattgtcactgctcgttacatattcaa 46804773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 11840030 - 11840143
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgta 214  Q
    ||||||||||||| ||||| |||||| |||||| ||||||||| |||||| ||| |||| || | |||||| |||||||| |||| |||||| ||||  |    
T  11840030 gggactattttgattaacaaagtgcacaatcagggactattttgaaattttgatacattgagggcctattgcgactactccttacgcattcagggaccaa 11840129  T
Q  215 aatgactattaccc 228  Q
    ||||||||||||||    
T  11840130 aatgactattaccc 11840143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 4215165 - 4215253
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattc 205  Q
    ||||||||||| ||||  |||||| |||| |||||||||||||||||| ||| |||| || |||||||| |||||||||||||||||||    
T  4215165 gactattttgattaacgaagtgcacaatccgagactattttaaaattttgattcattgagggactattgcgactactcgttacacattc 4215253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 118 - 200
Target Start/End: Original strand, 924811 - 924894
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttaca 200  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||| | | |||| | |||||||| | |||||||||||||    
T  924811 gactattttgactaacataatgcataatcagatactattttaaaattttgctacattgaaagactattattactactcgttaca 924894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 51234338 - 51234243
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattaga-gactattgtgactactcgttacacattcaaggac 211  Q
    |||||||||||||||||||| |||| ||| ||||||||||||||||||| ||| ||||| | || |||||| |||| || ||||||||||| ||||    
T  51234338 ggactattttgactaacataatgcacaatgagagactattttaaaattttgatccattaaaggattattgtaactaatcattacacattcacggac 51234243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 118 - 219
Target Start/End: Complemental strand, 35763166 - 35763064
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattaga-gactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||| ||||| ||||||||||| || ||||||||  ||||| ||| | || || |||||||||||||||||||||||||||||  |||| |||    
T  35763166 gactattttgattaacaaagtgcataatccgatactatttttgaattttgatacgttcgatgactattgtgactactcgttacacattcagagacgaaaa 35763067  T
Q  217 tga 219  Q
    |||    
T  35763066 tga 35763064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 12163147 - 12163043
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagagactattgtgactactcgttacacattcaaggacgtaaat 217  Q
    ||||||||||||||||||| |||||  |||  || |||||| |||||||||| ||||  |||||||||||  ||||||| |||||||||| |||| || |    
T  12163147 gactattttgactaacataatgcat--tcaaggattattttgaaatttcgatacattgaagactattgtggttactcgtaacacattcaatgacgaaact 12163050  T
Q  218 gactatt 224  Q
    |||||||    
T  12163049 gactatt 12163043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 225
Target Start/End: Original strand, 13834508 - 13834614
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaat 217  Q
    ||||||||||||||   |||| | |||||||||||||||||||||||  || |||| | ||||| |||||||||||| |||||||||| ||||| |||||    
T  13834508 actattttgactaatgaagtgtaaaatcagagactattttaaaattttaatacattaaaagactgttgtgactactcattacacattc-aggacctaaat 13834606  T
Q  218 gactatta 225  Q
     |||||||    
T  13834607 aactatta 13834614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 228
Target Start/End: Complemental strand, 17381392 - 17381281
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagag-actattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||||||||| |||| |  |||||||||| |||| |||||| ||| ||||  || ||||||||||||||| | |||||||||| | ||  |||    
T  17381392 gactattttgactaacaaagtggactatcagagacttttttgaaattttgatacattgaaggactattgtgactacttgctacacattcaggaaccaaaa 17381293  T
Q  217 tgactattaccc 228  Q
    ||||||||||||    
T  17381292 tgactattaccc 17381281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 17381547 - 17381642
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggac 211  Q
    |||||||||||| ||||| |||||| |||||| |||||||||  ||||| ||| |||| || |||||||||||||||| ||||| |||||| ||||    
T  17381547 ggactattttgattaacaaagtgcacaatcagggactattttggaattttgatacattgagggactattgtgactacttgttactcattcagggac 17381642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 31241238 - 31241336
Alignment:
Q  103 tactttaacatacgggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagagactattgtgactactcgttacac 201  Q
    |||||||| ||| | || |||||||||||| | |||| ||||| | ||||||||| |||||||| ||||||| | |||||||||  |||||||||||||    
T  31241238 tactttaatatatgtgattattttgactaagaaagtgtataattaaagactatttcaaaatttcaatgcatttgggactattgtagctactcgttacac 31241336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 971953 - 971864
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattca 206  Q
    ||||| ||||||||||| |||||| ||||| |||||||||| |||||| ||| |||| |  |||||||||||| |||||||||| |||||    
T  971953 gactactttgactaacaaagtgcacaatcaaagactattttgaaattttgatacattgaatgactattgtgacaactcgttacaaattca 971864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 12922269 - 12922180
Alignment:
Q  123 ttttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggac 211  Q
    ||||||||||||| ||||| ||||| | |||||||| |||||||||| |||| | | |||||||||||||||  ||||||||||| ||||    
T  12922269 ttttgactaacatcgtgcacaatcaaaaactattttgaaatttcgatacattgaaatactattgtgactacttattacacattcagggac 12922180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 4161730 - 4161618
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagag-actattgtgactactcgttacacattcaaggacgtaaa 216  Q
    |||||||||||| |||| | || |||||||  ||||||||| |||||| ||| ||||  || |||||||||||||||| |||||||||   ||||| ||     
T  4161730 gactattttgaccaacagaatgtataatcaaggactattttgaaattttgatacattgaaggactattgtgactactcattacacatttggggacgaaag 4161631  T
Q  217 tgactattaccct 229  Q
    |||||||||||||    
T  4161630 tgactattaccct 4161618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 11839877 - 11839765
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaa 215  Q
    |||||||||||||||||   ||||| |||| | ||||||||| ||||||||||  ||| || |||||||||| |||||||||||| |||||  |||  ||    
T  11839877 ggactattttgactaacgaggtgcacaatctgggactattttgaaatttcgatatattgagggactattgtggctactcgttacaaattcatagaccaaa 11839778  T
Q  216 atgactattaccc 228  Q
    ||| |||||||||    
T  11839777 atggctattaccc 11839765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 229
Target Start/End: Complemental strand, 13834435 - 13834323
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||||||||| |||||| |||||  |||||||||||||||| |||  ||| || ||||||| ||  ||||| ||||||||||| ||||  |||    
T  13834435 gactattttgactaacaaagtgcacaatcaaggactattttaaaattttgataaattgagggactattatggttactccttacacattcagggaccaaaa 13834336  T
Q  217 tgactattaccct 229  Q
    | | |||||||||    
T  13834335 taattattaccct 13834323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 31903482 - 31903594
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaa 215  Q
    |||||||||||| ||||| ||||||  |||||||||||||||  ||||| ||| | || || ||||||||| |||| ||||||||||||||  |||  ||    
T  31903482 ggactattttgattaacaaagtgcacgatcagagactattttggaattttgatacgttgagggactattgtaactattcgttacacattcagagaccaaa 31903581  T
Q  216 atgactattaccc 228  Q
    ||||| |||||||    
T  31903582 atgaccattaccc 31903594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 45615709 - 45615621
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattca 206  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||  || |||| | ||||| ||||||||| |  |||||||||||    
T  45615709 actattttgactaataaagtgcaaaatcagagactattttaaaattttaatacattgaaagactgttgtgactattaattacacattca 45615621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 20217460 - 20217541
Alignment:
Q  126 tgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaa 207  Q
    |||||||||||| ||  ||||| ||| ||||||||||||| ||| |||| ||||||||||||| |||||||||| ||||||||    
T  20217460 tgactaacatagggcgcaatca-agattattttaaaattttgatacattgagagactattgtggctactcgttatacattcaa 20217541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 228
Target Start/End: Original strand, 32934139 - 32934249
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaat 217  Q
    ||||||||||||| || |||||| ||||| | ||||||||||||||| ||| |||| || ||||||| ||   |||| ||||||||||| ||||  ||||    
T  32934139 actattttgactagcaaagtgcacaatcaaaaactattttaaaattttgatacattgagggactattatggtcactccttacacattcagggaccaaaat 32934238  T
Q  218 gactattaccc 228  Q
    || ||||||||    
T  32934239 gattattaccc 32934249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 230
Target Start/End: Complemental strand, 50384451 - 50384345
Alignment:
Q  125 ttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagag-actattgtgactactcgttacacattcaaggacgtaaatgactat 223  Q
    ||||||||||||||||| |||||||||||||||| ||||||  || |||| | | |||||| || ||| || ||||||||||| | ||  |||||| |||    
T  50384451 ttgactaacatagtgcacaatcagagactattttgaaattttaatacattggggtactattatggctaatcattacacattcaggaaccaaaatgattat 50384352  T
Q  224 tacccta 230  Q
    |||||||    
T  50384351 tacccta 50384345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 1758408 - 1758295
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaa 215  Q
    |||||||||||||||||  ||| || ||| ||| |||||||| |||||| ||| |||| || | ||||| || |||||| |||||||||||||| |  ||    
T  1758408 ggactattttgactaacgaagtacacaataagaaactattttgaaattttgatacattgagtgtctattatggctactccttacacattcaagggccaaa 1758309  T
Q  216 atgactattaccct 229  Q
    ||||| ||||||||    
T  1758308 atgaccattaccct 1758295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 7616950 - 7616998
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    |||||||||||||||||| |||||| ||||| | |||||||||||||||    
T  7616950 ggactattttgactaacaaagtgcaaaatcaaaaactattttaaaattt 7616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 8170962 - 8171070
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatga 219  Q
    |||||||||||||  | |||| |||||||||||||||| ||||||  || |||| || ||||||| ||||||||| |||||||| || ||||  || |||    
T  8170962 tattttgactaacgaattgcaaaatcagagactattttgaaatttttatacattgagggactattatgactactcattacacatccagggaccaaagtga 8171061  T
Q  220 ctattaccc 228  Q
    || ||||||    
T  8171062 ctgttaccc 8171070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 8170807 - 8170760
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    ||||||||||||||||| |||||| ||||| |||||||||| ||||||    
T  8170807 gactattttgactaacaaagtgcacaatcaaagactattttgaaattt 8170760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 12163192 - 12163259
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagagactattgt 186  Q
    ||||| |||||||||||  |||| ||||||||||||||||  ||||||||| ||||  ||||||||||    
T  12163192 actatattgactaacatgatgcacaatcagagactattttggaatttcgatacattgaagactattgt 12163259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 165
Target Start/End: Complemental strand, 33360918 - 33360875
Alignment:
Q  122 attttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||    
T  33360918 atttttactaacatagtgcataatcaaagactattttgaaattt 33360875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 2350974 - 2350920
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta 175  Q
    ||||||||||||||||||||| ||| |  |||||||||||||||| ||| |||||    
T  2350974 tattttgactaacatagtgcacaattatggactattttaaaatttggatacatta 2350920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 30888523 - 30888577
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta 175  Q
    |||||||||||||| |||| ||||||| ||| ||||||||||||| |||| ||||    
T  30888523 tattttgactaacagagtgaataatcaaagattattttaaaattttgatgtatta 30888577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 207
Target Start/End: Original strand, 42375231 - 42375321
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagagact-attgtgactactcgttacacattcaa 207  Q
    ||||||||| ||||||  |||||| ||||| | |||| ||| |||||||||| ||||| ||| | |||||| |||||| ||||||||||||    
T  42375231 gactattttaactaacgaagtgcagaatcaaaaactactttgaaatttcgatacattaaagaattattgtggctactcattacacattcaa 42375321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 46871596 - 46871522
Alignment:
Q  155 ttttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatgactattaccc 228  Q
    |||||||||||| ||  ||| |||||||| | |||||||||||||||||||||| ||   |||||||||||||||    
T  46871596 ttttaaaatttcaatatattgagagactaatctgactactcgttacacattcaatgatcgaaatgactattaccc 46871522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 51226106 - 51226188
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttaca 200  Q
    |||||||||||||||| |||||| |||||   || |||||| ||||||||| |||| | ||||||||||||| ||| ||||||    
T  51226106 actattttgactaacagagtgcacaatcaagaacaattttagaatttcgatacattgaaagactattgtgacaacttgttaca 51226188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 20177365 - 20177280
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta-gagactattgtgactactcgttacacattc 205  Q
    |||||||||||| || ||||| |||||  || |||||| || ||| ||| ||| | || |||||||||||||||||||||||||||    
T  20177365 tattttgactaatatggtgcacaatcaacgattattttgaatttttgatacatcaagaaactattgtgactactcgttacacattc 20177280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 1758467 - 1758574
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatga 219  Q
    |||||||||||| | | || | ||||||| ||||| |||||||||  || |||| |||||||||||||| ||||  ||| ||||||||||||  |||| |    
T  1758467 tattttgactaataaaatgaaaaatcagaaactatcttaaaattttaatacattgagagactattgtgattacttattaaacattcaaggac-caaataa 1758565  T
Q  220 ctattaccc 228  Q
    |||||||||    
T  1758566 ctattaccc 1758574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 25855265 - 25855321
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta 175  Q
    |||||||| | || ||||||||| ||||| |||||||||||||||||| || |||||    
T  25855265 actattttaattatcatagtgcacaatcaaagactattttaaaatttcaatacatta 25855321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 27146438 - 27146494
Alignment:
Q  147 agagactattttaaaatttcgatgcattagag-actattgtgactactcgttacaca 202  Q
    ||||||||||||||||||||||| |||||  | | |||||||| |||||||||||||    
T  27146438 agagactattttaaaatttcgatacattaatgaattattgtgattactcgttacaca 27146494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 27298631 - 27298579
Alignment:
Q  122 attttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt 174  Q
    ||||||||||| ||||| |||||| | ||||||||||||||||| ||| ||||    
T  27298631 attttgactaaaatagtacataattaaagactattttaaaattttgatacatt 27298579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 30623708 - 30623764
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta 175  Q
    |||||||||| ||| | |||||| ||||||||||| ||||||||||| ||| |||||    
T  30623708 actattttgattaagagagtgcacaatcagagactgttttaaaattttgatacatta 30623764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 39331013 - 39330929
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacac 201  Q
    ||||||||| | ||||| |||||||| ||||| ||||||||||||||| |||  ||| || ||||| | ||||||||| ||||||    
T  39331013 gactattttaattaacaaagtgcatagtcagatactattttaaaattttgatatattaagggactaatatgactactcattacac 39330929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 40407565 - 40407477
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagacta-ttttaaaatttcgatgcatt-agagactattgtgactactcgttacacatt 204  Q
    ||||||||||||||||| |||| | ||||| | |||| |||||||||||  || |||| ||| | ||| ||||||||||||||||||||    
T  40407565 gactattttgactaacaaagtgtaaaatcaaacactatttttaaaattttaattcattaagacattatcgtgactactcgttacacatt 40407477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 30843800 - 30843891
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattca 206  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||  ||||| ||| |||| |||||||||||||||||||| |||||||||||    
T  30843800 gggactattttgattaacaaagtgcacaatcagagactattttggaattttgatacattaagagactattgtgactactcattacacattca 30843891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 210
Target Start/End: Original strand, 40619188 - 40619281
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaagga 210  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||| ||| |||| || || || | ||||||||| |||||||||||||||    
T  40619188 gactattttgaataacatagtgcacaatcagagactattttaaaattttgatacattgagggattaatatgactactcattacacattcaagga 40619281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 14984513 - 14984407
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaat 217  Q
    |||||||||||||||  |||||| |||||| || |||||| ||||||||||  ||| || |||||||||||||||||||||||||||| |||||  ||||    
T  14984513 actattttgactaacgaagtgcacaatcagggagtattttgaaatttcgatatattgagggactattgtgactactcgttacacattc-aggaccaaaat 14984415  T
Q  218 gactatta 225  Q
    ||||||||    
T  14984414 gactatta 14984407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 621857 - 621944
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagagactattgtgactactcgttacacattca 206  Q
    ||||||||||||||||| |||||| | | || ||||||||| |||||| ||| |||| ||||||||| ||||||||| |||||||||||    
T  621857 gactattttgactaacaaagtgcacagttagggactattttgaaattttgatacatt-gagactattatgactactcattacacattca 621944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 43837193 - 43837080
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgta 214  Q
    |||||||||||||| ||||| ||||| |||||  || | ||||||||||| | | |||| || ||||||||||| || ||||||||||||||  |||  |    
T  43837193 gggactattttgaccaacatggtgcacaatcatggattgttttaaaattttggtacatttagggactattgtgattattcgttacacattcagtgactaa 43837094  T
Q  215 aatgactattaccc 228  Q
    ||||||||||||||    
T  43837093 aatgactattaccc 43837080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 47944388 - 47944335
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt 174  Q
    |||||||||||||| |||||| ||||| ||||||||||||||||||||| ||||    
T  47944388 tattttgactaacaaagtgcacaatcaaagactattttaaaatttcgatacatt 47944335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 21568531 - 21568639
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||| ||||| ||||||  |||| ||||||||||||| ||| ||| ||||  ||||||||||| |||| || |||||||| || ||||| ||     
T  21568531 gactattttgaataacagagtgcactatcaaagactattttaaatttttgatacattgggagactattgtcactattcattacacatgcagggacgaaag 21568630  T
Q  217 tgactatta 225  Q
    |||||||||    
T  21568631 tgactatta 21568639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 200
Target Start/End: Complemental strand, 38989837 - 38989754
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttaca 200  Q
    |||||||||||| |||||| ||||||||||  |||||||||||||||| ||| |||| |  |||||||||||||| || |||||    
T  38989837 gactattttgacgaacataatgcataatcacggactattttaaaattttgatacattgatggactattgtgactagtcattaca 38989754  T

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Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 47944547 - 47944638
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaag 208  Q
    ||||||||||| ||||  |||||| ||||| |||||||||||||||||| || |||| |  ||| |||||||||| | ||||||||||||||    
T  47944547 gactattttgattaacgaagtgcacaatcaaagactattttaaaatttcaatacattcaaggacaattgtgactattagttacacattcaag 47944638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 40618980 - 40618887
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattaga-gactattgtgactactcgttacacattcaaggac 211  Q
    |||||||||||||||| | |||| |||||  || |||||||||||||  || |||| || |||||||||||||| || ||||| ||||||||||    
T  40618980 actattttgactaacaaattgcacaatcaaggattattttaaaattttcatacatttgaagactattgtgactagtcattacatattcaaggac 40618887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 41898078 - 41898131
Alignment:
Q  177 agactattgtgactactcgttacacattcaaggacgtaaatgactattacccta 230  Q
    |||||||||||| ||||||||||||||||||||||  |||| ||||||| ||||    
T  41898078 agactattgtgattactcgttacacattcaaggaccaaaataactattatccta 41898131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 45681391 - 45681472
Alignment:
Q  124 tttgactaacatagtgcataatcagagactattttaaaatttcgatgca-ttagagactattgtgactactcgttacacatt 204  Q
    |||||||| || ||||||||||||  ||||||||||||||||| || || ||| |||||||||||| ||||| |||| ||||    
T  45681391 tttgactagcaaagtgcataatcaaggactattttaaaatttcaatacatttaaagactattgtgattactcattactcatt 45681472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 17573185 - 17573261
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactac 192  Q
    |||| |||||||||||||| ||||| |||||||||| | ||| |||||||||| |||| | |||||||| |||||||    
T  17573185 ggaccattttgactaacattgtgcacaatcagagaccaatttgaaatttcgatacattgatagactattatgactac 17573261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 225
Target Start/End: Complemental strand, 26483125 - 26483037
Alignment:
Q  138 tgcataatcagagactattttaaaatttcgatgcattaga-gactattgtgactactcgttacacattcaaggacgtaaatgactatta 225  Q
    |||||||||| | ||||||||| ||||| ||| ||||| | |||||||||| |||||||||| ||||  ||||||  ||||||||||||    
T  26483125 tgcataatcaaaaactattttagaattttgatacattaaatgactattgtgtctactcgttatacatctaaggaccaaaatgactatta 26483037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 26499982 - 26500094
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaa 215  Q
    |||||||||||||||| | |||||||||| | ||||| |||||||||||  || |||| ||| |||||| | ||||||  |||||||||||  ||   ||    
T  26499982 ggactattttgactaaaagagtgcataattatagacttttttaaaattttaatacattaagaaactattttaactactaattacacattcagagatcaaa 26500081  T
Q  216 atgactattaccc 228  Q
    |||||||||||||    
T  26500082 atgactattaccc 26500094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 5800263 - 5800176
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagag-actattgtgactactcgttacacatt 204  Q
    ||||||||||||||| |||| ||||||| |  |||||||||||||| || ||  |||  || |||||||||||||||| |||||||||    
T  5800263 gactattttgactaatatagcgcataattaaggactattttaaaatatcaatatattgaagaactattgtgactactcattacacatt 5800176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 225
Target Start/End: Complemental strand, 23152166 - 23152064
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagagactattgtgactactcgttacacattcaaggacgtaaat 217  Q
    |||||| ||| |||||||| |||||||||||| | |||||||||||||     ||| | |||||||||||  |||| |||||||||||| ||||  ||||    
T  23152166 gactatgttggctaacataatgcataatcagataatattttaaaattt-----catgaaagactattgtggttactagttacacattcatggaccaaaat 23152072  T
Q  218 gactatta 225  Q
     |||||||    
T  23152071 aactatta 23152064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 32537463 - 32537550
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagagactattgtgactactcgttacacattc 205  Q
    |||||||||||| |||||||| ||| |||| | |||||||| |||||| | | ||||   ||||||||||||||||||| ||| ||||    
T  32537463 gactattttgacaaacatagttcattatcaaaaactattttgaaattttgttacattgaggactattgtgactactcgtaacagattc 32537550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 45681242 - 45681143
Alignment:
Q  106 tttaacatacgggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagacta-ttgtgactactcgttacacat 203  Q
    ||||||||| | ||||||||||| ||| |||| ||| |||||  ||||||||| |||||| ||| |||| |||||||| ||| |||||||||||| ||||    
T  45681242 tttaacataagagactattttgattaatatagcgcacaatcaaggactattttgaaattttgatacattgagagactatttgagactactcgttaaacat 45681143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 257913 - 257807
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatga 219  Q
    |||||||| ||||| |||||| ||||| |   |||||| ||||||| || |||| | ||| |||||| |||||||||||||||||||| |||  |||| |    
T  257913 tattttgattaacagagtgcacaatcaaatgttattttgaaatttcaatacattcaaagattattgttactactcgttacacattcaaagacaaaaataa 257814  T
Q  220 ctattac 226  Q
    |||||||    
T  257813 ctattac 257807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 228
Target Start/End: Complemental strand, 4563884 - 4563750
Alignment:
Q  96 aaatgactactttaacatacgggactattttgactaacatagtgcataatcaga-gactattttaaaatttcgatgcattagag-actattgtgactact 193  Q
    ||||||||| ||||| ||   ||| |||||||||||||| | |||| ||||| | |||||||||||| |||| ||  |||  || |||||||| ||||||    
T  4563884 aaatgactattttaatatcgaggattattttgactaacaaaatgcacaatcaaaagactattttaaattttcaatatattgaagtactattgttactact 4563785  T
Q  194 cgttacacattcaaggacgtaaatgactattaccc 228  Q
     | |||||||||||||||  || ||||||||||||    
T  4563784 tgctacacattcaaggactaaagtgactattaccc 4563750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 34480135 - 34480208
Alignment:
Q  131 aacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacat 203  Q
    ||||||||||||||||| ||| ||||| |||||||| || |||| ||| |||| ||| |||||| |||||||||    
T  34480135 aacatagtgcataatcaaagattatttcaaaatttcaatacattgagaaactactgtaactacttgttacacat 34480208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 37326825 - 37326879
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt 174  Q
    |||||||||||||||||  ||||| ||||||||||| |||| |||||||||| ||||    
T  37326825 gactattttgactaaca--gtgcacaatcagagacttttttgaaatttcgatacatt 37326879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 43838821 - 43838878
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta 175  Q
    ||||||||||||||||| | |||| |||||  |||||||||||||||| ||| |||||    
T  43838821 gactattttgactaacaaaatgcacaatcaatgactattttaaaattttgatacatta 43838878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 44380133 - 44380088
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttc 166  Q
    |||||||||||||||| | |||||| | ||||||||||||||||||    
T  44380133 tattttgactaacataattcataattaaagactattttaaaatttc 44380088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 3445716 - 3445776
Alignment:
Q  125 ttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactatt 184  Q
    |||||||||||| || | ||||||||||||||||| | |||||||| ||| ||||||||||    
T  3445716 ttgactaacatactgtacaatcagagactattttatagtttcgatgtattgagagactatt 3445776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 43838547 - 43838499
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    |||||||| ||||||||| ||| || ||||| |||||||||||||||||    
T  43838547 ggactattatgactaacaaagtacaaaatcaaagactattttaaaattt 43838499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 51889805 - 51889753
Alignment:
Q  177 agactattgtgactactcgttacacattcaaggacgtaaatgactattaccct 229  Q
    |||||||||||||||||| |||||||||||  ||   ||||||||||||||||    
T  51889805 agactattgtgactactccttacacattcagagatcaaaatgactattaccct 51889753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 53705953 - 53706057
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatga 219  Q
    |||||||||| ||| |||||| ||| |  ||||||||| |||||||||| || | || ||||||| || ||||| |||||||| |||| |||  ||||||    
T  53705953 tattttgactgacaaagtgcacaattatggactattttgaaatttcgatacagtgagggactattttggctacttgttacacaatcaaagaccaaaatga 53706052  T
Q  220 ctatt 224  Q
    |||||    
T  53706053 ctatt 53706057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 4e-18; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 17676791 - 17676886
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggac 211  Q
    ||||| |||||||||||||||| || |||||||||||||||| | ||||||||  ||| || || | |||||||||||||||||||||||||||||    
T  17676791 ggactcttttgactaacatagttcacaatcagagactattttgatatttcgattaattgagggattgttgtgactactcgttacacattcaaggac 17676886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 122 - 208
Target Start/End: Original strand, 27001388 - 27001475
Alignment:
Q  122 attttgactaacatagtgcataatcagagactattttaaaatttcgatgcat-tagagactattgtgactactcgttacacattcaag 208  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||| |||  ||  |||||||||||||||||||| |||||||||||||    
T  27001388 attttgagtaacagagtgcacaatcagagactattttaaaattttgatatatcgagagactattgtgactactcattacacattcaag 27001475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 225
Target Start/End: Original strand, 6217641 - 6217749
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||||||||  ||||||||||||  ||||||||| |||||| ||| |||| || |||||||||| ||| ||| |||||||||| ||||  |||    
T  6217641 gactattttgactaacgaagtgcataatcatggactattttgaaattttgatacattgagggactattgtggctattcgctacacattcatggaccaaaa 6217740  T
Q  217 tgactatta 225  Q
    |||||||||    
T  6217741 tgactatta 6217749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 107 - 234
Target Start/End: Complemental strand, 14468888 - 14468760
Alignment:
Q  107 ttaacatacgggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattagagactattgtgactactcgttacacattca 206  Q
    |||||||| | ||||||||||| |||||||||||| ||| |  ||||||||| |||||||||| ||||   |||||||||  ||| |||||||| |||||    
T  14468888 ttaacataagagactattttgattaacatagtgcacaattaaggactattttgaaatttcgatacattgatgactattgtagctattcgttacatattca 14468789  T
Q  207 aggacgtaaatgactatta-ccctatttt 234  Q
    |||||  | |||||||||| |||||||||    
T  14468788 aggaccaacatgactattatccctatttt 14468760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 32270629 - 32270738
Alignment:
Q  103 tactttaacatacgggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacac 201  Q
    ||||||||| || |||||||||||||||||||||  ||| ||||| ||| |||||| |||||||||| |||| ||| | |||| ||| |||||||||||     
T  32270629 tactttaacgtaagggactattttgactaacatatcgcacaatcatagattattttgaaatttcgatacattgagaaattattatgattactcgttacat 32270728  T
Q  202 attcaaggac 211  Q
    ||||| ||||    
T  32270729 attcagggac 32270738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 31949276 - 31949355
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactc 194  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||  ||  ||| |||||||||||||| |||||    
T  31949276 gggactattttgactaacatagtgcacaatcagagactctcttaaaattttaatatattaagagactattgtgattactc 31949355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 16127155 - 16127049
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaatga 219  Q
    |||||||||||||| | | || |||||  ||||||||| |||||| ||| | || |||||||||||||||||||| ||||||||| | ||||  ||||||    
T  16127155 tattttgactaacaaactacacaatcaaggactattttgaaattttgatactttgagagactattgtgactactccttacacatttagggaccaaaatga 16127056  T
Q  220 ctattac 226  Q
    |||||||    
T  16127055 ctattac 16127049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 8206290 - 8206400
Alignment:
Q  117 ggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcattaga-gactattgtgactactcgttacacattcaaggacgtaa 215  Q
    ||||||||||||||||   |||||| | |||| ||||||| |||||||||||| ||||| | ||||||  ||||||||  |||||||||||| ||   ||    
T  8206290 ggactattttgactaatgaagtgcacattcagggactattataaaatttcgatacattaaaggactatcatgactacttattacacattcaatgatcaaa 8206389  T
Q  216 atgactattac 226  Q
    |||||||||||    
T  8206390 atgactattac 8206400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 198
Target Start/End: Complemental strand, 13200661 - 13200583
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgtta 198  Q
    |||||||||||||||||| |||||| ||  | ||||||||||||| |||  ||| |||||||||| |||||||||||||    
T  13200661 tattttgactaacatagtacataatgaggaattattttaaaatttagatatattaagagactattatgactactcgtta 13200583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 917156 - 917265
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    |||||||||||  || | |||| | ||||| ||||||||||||||||||||| |||| || ||| |||||||||| |  ||||||||||| | ||  |||    
T  917156 gactattttgataaataaagtgtacaatcaaagactattttaaaatttcgatacattgagggacgattgtgactaatatttacacattcaggaaccaaaa 917255  T
Q  217 tgactattac 226  Q
    ||||||||||    
T  917256 tgactattac 917265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 116 - 165
Target Start/End: Original strand, 14461768 - 14461817
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    ||||||||||||||||||  |||| | |||||||||||||||||||||||    
T  14461768 gggactattttgactaacgaagtgtacaatcagagactattttaaaattt 14461817  T

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Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 118 - 206
Target Start/End: Original strand, 30118645 - 30118734
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattca 206  Q
    ||||| ||||||||||| ||  || ||||| |||||||||||||||| | ||||||| || || |||||||||||||  |||||||||||    
T  30118645 gactaatttgactaacaaagaacacaatcaaagactattttaaaattgcaatgcattaagggattattgtgactactacttacacattca 30118734  T

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Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 42420532 - 42420637
Alignment:
Q  124 tttgactaacatagtgcataatcagagactattttaaaatttcgatgca-ttagagactattgtgactactcgttacacattcaaggacgtaaatgacta 222  Q
    ||||||||||| ||| ||||||||   ||||||||||||||| ||| || ||| |||| ||||||||||  |||||||||||||  |||  |||| ||||    
T  42420532 tttgactaacaaagtacataatcacgaactattttaaaattttgatacatttaaagacaattgtgactatacgttacacattcagagaccaaaataacta 42420631  T
Q  223 ttaccc 228  Q
    ||||||    
T  42420632 ttaccc 42420637  T

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Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 9955370 - 9955314
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta 175  Q
    |||||||||||||||||| |||  ||||| | ||||| |||||||||||||||||||    
T  9955370 actattttgactaacataatgccaaatcaaatactatattaaaatttcgatgcatta 9955314  T

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Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 229
Target Start/End: Original strand, 26675267 - 26675379
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||| ||||| | |||| ||||| ||||||||||| ||| | ||| |||| | ||| |||||||| || || ||||||||||||| ||  ||     
T  26675267 gactattttgagtaacagaatgcacaatcaaagactattttagaatattgatacattaaaagattattgtgattagtcattacacattcaagaaccaaag 26675366  T
Q  217 tgactattaccct 229  Q
    |||||||||||||    
T  26675367 tgactattaccct 26675379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 229
Target Start/End: Original strand, 26946875 - 26946987
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||| ||||| | |||| ||||| ||||||||||| ||| | ||| |||| | ||| |||||||| || || ||||||||||||| ||  ||     
T  26946875 gactattttgagtaacagaatgcacaatcaaagactattttagaatattgatacattaaaagattattgtgattagtcattacacattcaagaaccaaag 26946974  T
Q  217 tgactattaccct 229  Q
    |||||||||||||    
T  26946975 tgactattaccct 26946987  T

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Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 32517927 - 32517871
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt 174  Q
    |||||||||||| ||  ||||||| | |||| |||||||||||||||||||||||||    
T  32517927 gactattttgaccaatgtagtgcacagtcagggactattttaaaatttcgatgcatt 32517871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 28503883 - 28503776
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgtaaa 216  Q
    ||||||||||||||||| | |||| ||| | |||||||||||||||||| |  |||| ||| |||||| ||| || || ||||| ||| || |||| |||    
T  28503883 gactattttgactaacagaatgcacaattaaagactattttaaaatttcaactcattaagaaactattatgattattccttacatatttaaagacgaaaa 28503784  T
Q  217 tgactatt 224  Q
    ||||||||    
T  28503783 tgactatt 28503776  T

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Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 37853308 - 37853261
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaattt 165  Q
    ||||||||||||||||| |||||| ||||| ||| |||||||||||||    
T  37853308 gactattttgactaacaaagtgcacaatcaaagattattttaaaattt 37853261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 33598337 - 33598391
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta 175  Q
    |||||||||||| |||||| |||||||  |||||||||||||||| ||| |||||    
T  33598337 tattttgactaatatagtgtataatcaacgactattttaaaattttgatacatta 33598391  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 35293809 - 35293859
Alignment:
Q  119 actattttgactaacatagtgcataatcagagactattttaaaatttcgat 169  Q
    |||||||||||||||| | |||||| |||| ||||||||| ||||||||||    
T  35293809 actattttgactaacacaatgcatactcagtgactattttgaaatttcgat 35293859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 22579502 - 22579575
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgact 190  Q
    ||||||||||| ||||| |||| |||||||| || ||||||||||||| ||| |||| |  |||||||||||||    
T  22579502 gactattttgattaacaaagtgtataatcagggattattttaaaattttgatacattgatggactattgtgact 22579575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 23159139 - 23159026
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgta 214  Q
    ||||||||||| ||||||  | |||| ||||| | ||||||||||||||| ||| |||| |  ||||||| | |||| || ||||||||||| ||||  |    
T  23159139 gggactatttttactaacgaaatgcacaatcaaatactattttaaaattttgatacattgatggactattataactaatcattacacattcagggactaa 23159040  T
Q  215 aatgactattaccc 228  Q
    | ||||||||||||    
T  23159039 agtgactattaccc 23159026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 463248 - 463181
Alignment:
Q  106 tttaacatacgggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt 174  Q
    |||||| || ||||||||||| ||||||||||| || ||||||| ||||||| ||||||| ||| ||||    
T  463248 tttaacgtaagggactattttaactaacatagt-cacaatcagatactatttcaaaattttgatacatt 463181  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 2707803 - 2707858
Alignment:
Q  175 agagactattgtgac--tactcgttacacattcaaggacgtaaatgactattaccc 228  Q
    |||||||||| ||||  ||||||||||||||||| ||||  |||||||||||||||    
T  2707803 agagactattttgacattactcgttacacattcagggaccaaaatgactattaccc 2707858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 4438693 - 4438733
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaa 161  Q
    |||||||||||| |||||||| |||||||| ||||||||||    
T  4438693 tattttgactaatatagtgcacaatcagagtctattttaaa 4438733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 9607202 - 9607154
Alignment:
Q  126 tgactaacatagtgcataatcagagactattttaaaatttcgatgcatt 174  Q
    ||||||||| | |||| ||||||||||||||||||||||| ||| ||||    
T  9607202 tgactaacacattgcaaaatcagagactattttaaaattttgatacatt 9607154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 39195060 - 39195104
Alignment:
Q  118 gactattttgactaacatagtgcataatcagagactattttaaaa 162  Q
    |||||||||||  ||||| ||||| ||||||||||||||||||||    
T  39195060 gactattttgaggaacatggtgcacaatcagagactattttaaaa 39195104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 116 - 230
Target Start/End: Complemental strand, 81405 - 81290
Alignment:
Q  116 gggactattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgttacacattcaaggacgta 214  Q
    ||||||||||||||||||  |||||| ||||| | |||||||| ||||||| || || | ||| ||||||||| |||||| || ||||||||||||   |    
T  81405 gggactattttgactaacgaagtgcacaatcataaactattttgaaatttcaatacaatcagatactattgtggctactcattgcacattcaaggatcaa 81306  T
Q  215 aatgactattacccta 230  Q
    ||||||||||||||||    
T  81305 aatgactattacccta 81290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 7607 - 7685
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatt-agagactattgtgactactcgtta 198  Q
    |||||||||||| ||| |||   |||||||| |||||| ||||||  ||||||| ||| ||||||||||||||||||||    
T  7607 tattttgactaatataatgcgctatcagagattattttgaaattttaatgcattgagaaactattgtgactactcgtta 7685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 329037 - 329125
Alignment:
Q  121 tattttgactaacatagtgcataatcagagactattttaaaatttcgatgcatta-gagactattgtgactactcgttacacattcaag 208  Q
    ||||| |||||||| |||| ||||||||| ||||||||| ||||| ||| ||||| | || |||| | | || ||||||||||||||||    
T  329037 tatttagactaacaaagtgtataatcagaaactattttataattttgatacattaagtgattattttaaatattcgttacacattcaag 329125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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