View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11521_low_10 (Length: 327)

Name: NF11521_low_10
Description: NF11521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11521_low_10
NF11521_low_10
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-309)||(43098-43406)
[»] chr8 (38 HSPs)
chr8 (202-309)||(13160671-13160779)
chr8 (234-309)||(2626488-2626563)
chr8 (202-303)||(45071240-45071342)
chr8 (202-309)||(12670307-12670414)
chr8 (233-309)||(17823545-17823621)
chr8 (223-309)||(28407385-28407471)
chr8 (211-309)||(39461062-39461162)
chr8 (202-303)||(36720771-36720874)
chr8 (224-298)||(18164840-18164914)
chr8 (235-309)||(20869588-20869662)
chr8 (235-309)||(30454187-30454261)
chr8 (234-299)||(30962864-30962929)
chr8 (202-309)||(35261648-35261757)
chr8 (234-306)||(26954104-26954176)
chr8 (202-308)||(28817683-28817791)
chr8 (234-302)||(20284164-20284232)
chr8 (234-302)||(21070793-21070861)
chr8 (202-309)||(29521742-29521851)
chr8 (233-309)||(7136619-7136695)
chr8 (234-302)||(14018060-14018128)
chr8 (234-309)||(6760791-6760866)
chr8 (237-308)||(24245421-24245491)
chr8 (234-301)||(24365151-24365218)
chr8 (234-303)||(25250497-25250566)
chr8 (202-309)||(44530118-44530227)
chr8 (201-296)||(31457155-31457251)
chr8 (234-302)||(42083790-42083858)
chr8 (223-302)||(44781585-44781665)
chr8 (206-302)||(44742580-44742678)
chr8 (234-303)||(8897855-8897924)
chr8 (202-311)||(12625856-12625968)
chr8 (234-302)||(22598133-22598201)
chr8 (202-292)||(23000276-23000365)
chr8 (235-299)||(35105902-35105966)
chr8 (234-308)||(11748269-11748343)
chr8 (262-302)||(11001069-11001109)
chr8 (234-302)||(26457691-26457759)
chr8 (258-310)||(40607839-40607891)
[»] chr6 (23 HSPs)
chr6 (207-310)||(9161091-9161195)
chr6 (202-309)||(1346933-1347040)
chr6 (202-309)||(1354814-1354921)
chr6 (234-310)||(6024201-6024277)
chr6 (211-309)||(12221983-12222083)
chr6 (234-309)||(3815168-3815243)
chr6 (211-295)||(29355923-29356009)
chr6 (234-302)||(14975171-14975239)
chr6 (234-309)||(8409212-8409287)
chr6 (234-309)||(20400636-20400711)
chr6 (234-309)||(24734602-24734677)
chr6 (235-301)||(2166504-2166570)
chr6 (235-301)||(2178137-2178203)
chr6 (202-302)||(13905036-13905138)
chr6 (246-308)||(8417442-8417504)
chr6 (234-300)||(12063445-12063511)
chr6 (234-308)||(14553482-14553555)
chr6 (211-302)||(12889402-12889495)
chr6 (234-303)||(15866128-15866197)
chr6 (235-300)||(28007604-28007671)
chr6 (234-303)||(24097556-24097625)
chr6 (202-273)||(33138838-33138911)
chr6 (234-300)||(32068074-32068137)
[»] chr2 (44 HSPs)
chr2 (202-309)||(12023976-12024084)
chr2 (202-309)||(25249795-25249903)
chr2 (202-309)||(8455373-8455482)
chr2 (234-310)||(17896227-17896303)
chr2 (202-309)||(11514405-11514514)
chr2 (206-308)||(24200686-24200790)
chr2 (234-309)||(14530287-14530362)
chr2 (211-303)||(7214509-7214603)
chr2 (235-301)||(45235910-45235976)
chr2 (206-309)||(10543667-10543772)
chr2 (235-308)||(23397736-23397809)
chr2 (234-302)||(21377164-21377232)
chr2 (202-309)||(21779318-21779425)
chr2 (202-303)||(17623539-17623642)
chr2 (202-303)||(17667977-17668080)
chr2 (202-303)||(22371032-22371132)
chr2 (234-309)||(25079809-25079884)
chr2 (234-300)||(5841006-5841072)
chr2 (202-302)||(9671156-9671257)
chr2 (224-298)||(17380317-17380391)
chr2 (223-308)||(17705465-17705551)
chr2 (234-303)||(19977805-19977874)
chr2 (241-301)||(99361-99421)
chr2 (202-309)||(27573590-27573698)
chr2 (234-302)||(29419980-29420048)
chr2 (225-300)||(44604832-44604907)
chr2 (234-300)||(5450263-5450329)
chr2 (223-277)||(14444730-14444784)
chr2 (234-302)||(4516442-4516510)
chr2 (234-302)||(33795261-33795329)
chr2 (234-304)||(40416962-40417032)
chr2 (234-303)||(39914397-39914466)
chr2 (203-302)||(44521431-44521532)
chr2 (234-309)||(26684712-26684788)
chr2 (234-293)||(4852305-4852364)
chr2 (238-309)||(14544032-14544103)
chr2 (226-293)||(25641487-25641554)
chr2 (223-303)||(44643497-44643579)
chr2 (234-300)||(17472949-17473015)
chr2 (202-302)||(23145755-23145857)
chr2 (202-302)||(23557545-23557647)
chr2 (202-279)||(10546161-10546241)
chr2 (201-309)||(24860044-24860152)
chr2 (249-293)||(31821447-31821491)
[»] chr5 (31 HSPs)
chr5 (202-309)||(41014288-41014396)
chr5 (211-310)||(27328720-27328821)
chr5 (202-309)||(8170041-8170148)
chr5 (235-308)||(37024646-37024719)
chr5 (202-293)||(22907922-22908014)
chr5 (211-309)||(38879550-38879650)
chr5 (234-309)||(43334171-43334246)
chr5 (202-302)||(2838754-2838856)
chr5 (235-309)||(35710282-35710356)
chr5 (206-302)||(208989-209086)
chr5 (235-300)||(22861758-22861823)
chr5 (202-309)||(24448859-24448968)
chr5 (211-309)||(4619172-4619272)
chr5 (206-308)||(31299602-31299705)
chr5 (202-291)||(32703411-32703500)
chr5 (202-294)||(1850624-1850717)
chr5 (234-302)||(23974756-23974824)
chr5 (234-298)||(34074653-34074717)
chr5 (234-309)||(1565400-1565475)
chr5 (234-301)||(22187262-22187329)
chr5 (234-302)||(28516525-28516593)
chr5 (202-303)||(22600429-22600532)
chr5 (259-302)||(39079882-39079925)
chr5 (224-302)||(39301099-39301178)
chr5 (202-275)||(43574609-43574684)
chr5 (257-295)||(9794473-9794511)
chr5 (249-303)||(17419889-17419943)
chr5 (202-267)||(19143000-19143066)
chr5 (234-279)||(22025542-22025587)
chr5 (262-303)||(31362454-31362495)
chr5 (250-298)||(10634253-10634301)
[»] chr4 (55 HSPs)
chr4 (202-309)||(5648228-5648336)
chr4 (202-309)||(6430683-6430791)
chr4 (202-309)||(14590806-14590916)
chr4 (197-309)||(30639349-30639462)
chr4 (202-309)||(48598882-48598989)
chr4 (234-309)||(54730218-54730293)
chr4 (202-309)||(5306721-5306829)
chr4 (203-309)||(11054206-11054312)
chr4 (202-308)||(47528587-47528693)
chr4 (202-303)||(40915804-40915906)
chr4 (211-309)||(16911531-16911631)
chr4 (202-309)||(20224953-20225060)
chr4 (234-309)||(16408694-16408769)
chr4 (235-297)||(39077886-39077948)
chr4 (234-303)||(44363223-44363292)
chr4 (226-310)||(55830803-55830888)
chr4 (223-302)||(17315378-17315457)
chr4 (234-309)||(21646933-21647008)
chr4 (234-309)||(30352682-30352757)
chr4 (223-302)||(42164228-42164307)
chr4 (202-298)||(17043451-17043549)
chr4 (202-302)||(47441587-47441689)
chr4 (203-299)||(30496380-30496476)
chr4 (223-300)||(32478865-32478942)
chr4 (202-309)||(8473679-8473786)
chr4 (238-302)||(12257688-12257752)
chr4 (202-304)||(47443927-47444035)
chr4 (224-299)||(49938671-49938746)
chr4 (234-300)||(23580299-23580365)
chr4 (206-298)||(54175043-54175137)
chr4 (234-303)||(14983809-14983878)
chr4 (211-310)||(55766532-55766633)
chr4 (238-302)||(487230-487294)
chr4 (202-308)||(37494821-37494929)
chr4 (202-300)||(9832370-9832468)
chr4 (234-309)||(10660373-10660448)
chr4 (234-309)||(10874518-10874593)
chr4 (202-303)||(19027823-19027926)
chr4 (206-303)||(25343162-25343261)
chr4 (251-302)||(50856344-50856395)
chr4 (257-303)||(5313108-5313154)
chr4 (259-309)||(23501762-23501812)
chr4 (234-292)||(25463108-25463166)
chr4 (234-300)||(30690274-30690340)
chr4 (223-293)||(32629348-32629418)
chr4 (234-295)||(7385567-7385628)
chr4 (237-302)||(43035224-43035289)
chr4 (234-302)||(35567146-35567214)
chr4 (235-295)||(41018885-41018945)
chr4 (234-302)||(54640430-54640498)
chr4 (234-302)||(54966997-54967065)
chr4 (202-260)||(7909338-7909397)
chr4 (225-303)||(44357195-44357274)
chr4 (259-301)||(3580952-3580994)
chr4 (202-279)||(29207955-29208032)
[»] chr1 (51 HSPs)
chr1 (202-309)||(32632614-32632722)
chr1 (202-309)||(34725155-34725262)
chr1 (202-301)||(38478339-38478438)
chr1 (202-309)||(47214503-47214610)
chr1 (236-302)||(14617037-14617103)
chr1 (224-309)||(22930148-22930233)
chr1 (204-303)||(41319865-41319966)
chr1 (234-302)||(18724636-18724704)
chr1 (231-303)||(27474279-27474351)
chr1 (202-309)||(45812594-45812701)
chr1 (202-310)||(23768377-23768487)
chr1 (231-309)||(45402087-45402164)
chr1 (202-302)||(11596512-11596613)
chr1 (202-306)||(19414434-19414538)
chr1 (202-301)||(25468320-25468421)
chr1 (211-309)||(18944635-18944735)
chr1 (211-309)||(30395794-30395894)
chr1 (236-303)||(20036218-20036285)
chr1 (206-303)||(27201645-27201744)
chr1 (246-309)||(34714615-34714678)
chr1 (202-303)||(46248010-46248113)
chr1 (206-302)||(17470407-17470505)
chr1 (234-308)||(20004183-20004257)
chr1 (234-308)||(46991797-46991871)
chr1 (234-303)||(6925098-6925167)
chr1 (234-309)||(10668212-10668292)
chr1 (223-302)||(35117847-35117927)
chr1 (231-302)||(33222983-33223054)
chr1 (241-299)||(9939463-9939521)
chr1 (205-301)||(12126897-12126993)
chr1 (234-299)||(22327101-22327166)
chr1 (202-301)||(44485166-44485267)
chr1 (234-302)||(2435878-2435946)
chr1 (234-302)||(2435984-2436052)
chr1 (202-303)||(4430083-4430186)
chr1 (234-309)||(18335379-18335454)
chr1 (234-302)||(25290162-25290232)
chr1 (234-308)||(8197036-8197110)
chr1 (206-267)||(22324927-22324989)
chr1 (202-279)||(35253244-35253321)
chr1 (234-302)||(27136743-27136811)
chr1 (257-309)||(40424734-40424786)
chr1 (238-302)||(50760321-50760385)
chr1 (206-279)||(35005145-35005220)
chr1 (249-303)||(6983915-6983969)
chr1 (202-279)||(31272432-31272510)
chr1 (260-309)||(19932869-19932918)
chr1 (234-279)||(23371146-23371191)
chr1 (234-309)||(18742051-18742127)
chr1 (234-302)||(50811938-50812006)
chr1 (234-302)||(52910216-52910284)
[»] scaffold0005 (1 HSPs)
scaffold0005 (202-309)||(226462-226572)
[»] chr3 (42 HSPs)
chr3 (223-309)||(10870031-10870117)
chr3 (197-309)||(12914087-12914201)
chr3 (202-309)||(26869698-26869806)
chr3 (203-309)||(7696945-7697051)
chr3 (234-309)||(8247780-8247855)
chr3 (202-303)||(22122974-22123075)
chr3 (202-302)||(22609764-22609865)
chr3 (202-309)||(16735432-16735540)
chr3 (234-310)||(26782356-26782432)
chr3 (211-309)||(46421103-46421203)
chr3 (203-309)||(1217081-1217187)
chr3 (224-299)||(5173801-5173876)
chr3 (234-309)||(13730695-13730770)
chr3 (211-299)||(13628858-13628948)
chr3 (202-309)||(40272869-40272978)
chr3 (202-301)||(39203515-39203614)
chr3 (204-310)||(6411881-6411988)
chr3 (234-301)||(34420735-34420802)
chr3 (238-309)||(52926305-52926376)
chr3 (202-302)||(26573125-26573227)
chr3 (211-303)||(29366788-29366882)
chr3 (202-309)||(4495721-4495830)
chr3 (234-298)||(30928238-30928302)
chr3 (234-302)||(35417914-35417982)
chr3 (234-302)||(45620920-45620988)
chr3 (234-302)||(53062036-53062104)
chr3 (234-292)||(516417-516475)
chr3 (234-301)||(9607202-9607269)
chr3 (201-306)||(21796831-21796937)
chr3 (223-289)||(33926094-33926160)
chr3 (206-302)||(53996627-53996725)
chr3 (202-297)||(7942993-7943090)
chr3 (202-277)||(54032616-54032693)
chr3 (234-302)||(19731000-19731068)
chr3 (262-302)||(48667156-48667196)
chr3 (234-301)||(25944468-25944535)
chr3 (256-302)||(31542411-31542457)
chr3 (202-267)||(31592882-31592947)
chr3 (206-289)||(45139539-45139624)
chr3 (202-254)||(47624088-47624141)
chr3 (206-272)||(10795486-10795554)
chr3 (234-302)||(19751576-19751644)
[»] chr7 (57 HSPs)
chr7 (234-309)||(19426980-19427055)
chr7 (235-309)||(47077945-47078019)
chr7 (202-302)||(40463853-40463954)
chr7 (202-309)||(21172066-21172173)
chr7 (211-309)||(43557441-43557541)
chr7 (234-309)||(27629603-27629678)
chr7 (202-309)||(2541076-2541186)
chr7 (202-303)||(33871967-33872069)
chr7 (224-309)||(42495916-42496001)
chr7 (202-309)||(42798638-42798747)
chr7 (202-301)||(10693130-10693229)
chr7 (202-309)||(32758230-32758337)
chr7 (202-309)||(34626265-34626373)
chr7 (231-303)||(39123865-39123937)
chr7 (211-309)||(46354163-46354263)
chr7 (223-309)||(18327003-18327089)
chr7 (202-309)||(11617645-11617754)
chr7 (202-298)||(28078189-28078286)
chr7 (234-303)||(42805499-42805568)
chr7 (234-310)||(22699061-22699137)
chr7 (245-309)||(35334916-35334980)
chr7 (234-302)||(29907393-29907463)
chr7 (202-296)||(42391157-42391251)
chr7 (202-303)||(42476848-42476949)
chr7 (236-301)||(7193062-7193127)
chr7 (202-302)||(19265791-19265892)
chr7 (202-309)||(48735179-48735287)
chr7 (234-302)||(3469270-3469338)
chr7 (202-301)||(6736867-6736967)
chr7 (234-302)||(16341254-16341322)
chr7 (234-302)||(28362236-28362304)
chr7 (234-309)||(7794597-7794672)
chr7 (225-310)||(5180238-5180324)
chr7 (205-274)||(15108457-15108527)
chr7 (202-279)||(31591166-31591243)
chr7 (211-299)||(47716438-47716528)
chr7 (202-302)||(48123541-48123643)
chr7 (234-303)||(7644931-7645000)
chr7 (235-303)||(13805077-13805145)
chr7 (234-309)||(1424001-1424076)
chr7 (213-303)||(22065563-22065654)
chr7 (234-277)||(38262287-38262330)
chr7 (202-302)||(23419731-23419833)
chr7 (234-284)||(35203433-35203483)
chr7 (232-302)||(44123710-44123780)
chr7 (202-277)||(7879639-7879716)
chr7 (234-302)||(14099097-14099165)
chr7 (234-302)||(14409114-14409182)
chr7 (249-309)||(14732928-14732988)
chr7 (223-279)||(32233214-32233270)
chr7 (197-255)||(38604550-38604609)
chr7 (202-299)||(11741774-11741871)
chr7 (202-279)||(18512510-18512588)
chr7 (234-279)||(8491918-8491963)
chr7 (234-279)||(8518727-8518772)
chr7 (224-302)||(12473280-12473359)
chr7 (234-302)||(42101976-42102044)
[»] scaffold0187 (2 HSPs)
scaffold0187 (205-310)||(10110-10215)
scaffold0187 (205-310)||(20438-20543)
[»] scaffold0168 (1 HSPs)
scaffold0168 (202-309)||(30548-30655)
[»] scaffold1176 (1 HSPs)
scaffold1176 (204-310)||(1646-1752)
[»] scaffold0258 (1 HSPs)
scaffold0258 (202-302)||(13081-13182)
[»] scaffold0223 (1 HSPs)
scaffold0223 (202-309)||(11101-11207)
[»] scaffold0057 (3 HSPs)
scaffold0057 (234-309)||(46800-46875)
scaffold0057 (202-309)||(24829-24933)
scaffold0057 (257-301)||(46997-47041)
[»] scaffold0254 (1 HSPs)
scaffold0254 (235-301)||(4134-4200)
[»] scaffold0049 (1 HSPs)
scaffold0049 (234-308)||(58947-59021)
[»] scaffold0036 (1 HSPs)
scaffold0036 (202-308)||(35074-35184)
[»] scaffold0018 (1 HSPs)
scaffold0018 (201-309)||(72923-73027)
[»] scaffold0116 (1 HSPs)
scaffold0116 (231-303)||(8866-8938)
[»] scaffold0024 (1 HSPs)
scaffold0024 (250-301)||(83852-83903)
[»] scaffold0311 (1 HSPs)
scaffold0311 (234-308)||(10780-10854)
[»] scaffold0194 (1 HSPs)
scaffold0194 (249-307)||(24635-24693)


Alignment Details
Target: scaffold0031 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 43406 - 43098
Alignment:
Q  1 atatccgtccatactatgttatgacctgtccactatccataataagctatcgccttgacggtgcaaaatagagtcaaagagggtgtctctcttttatttg 100  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43406 atatctgtccatactatgttacgacctgtccactatccattataagctatcgccttgacggtgcaaaatagagtcaaagagggtgtctctcttttatttg 43307  T
Q  101 attttagtttatctacaaatgaatgaaattaaagagtgtgtctctactatactaaattacttataaaagcacaattcgatgtattgaagctcccgcgtct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||| |||||||     
T  43306 attttagtttatctacaaatgaatgaaattaaagagtgtgtctctactatactaaattacttataaaaggacaattcggtgtactgaagctgccgcgtcc 43207  T
Q  201 taccatttgatgtattgtatgcgccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
     ||||||||||||||||||   | ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| |||||||    
T  43206 caccatttgatgtattgtaaatgtcttactctgtttttacacaagaggctgtttctaggacctgaactcgtgacctttcaatcacatgacaataacttta 43107  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  43106 ccagttgcg 43098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 13160779 - 13160671
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| |  |||||||||||||||||||    
T  13160779 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttctaggacttgaacccgtgaccttacagtcacatgacaacaacttta 13160680  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  13160679 ccagttgcg 13160671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 2626563 - 2626488
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  2626563 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccaattgcg 2626488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 45071342 - 45071240
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| || |||||||| ||||||||| | ||||||||||||||||||||    
T  45071342 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaacttta 45071243  T
Q  301 cca 303  Q
    |||    
T  45071242 cca 45071240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 12670307 - 12670414
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  12670307 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 12670405  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  12670406 ccagttgcg 12670414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 233 - 309
Target Start/End: Complemental strand, 17823621 - 17823545
Alignment:
Q  233 gtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| |||||    
T  17823621 gtttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcg 17823545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 28407471 - 28407385
Alignment:
Q  223 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||||| |||||    
T  28407471 gccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcg 28407385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 39461062 - 39461162
Alignment:
Q  211 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||| || ||||||||||||||| |||||||||| ||||||| ||||||||||| |||||||||||  || ||||||||||||||||||| ||||    
T  39461062 tgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccagttgc 39461161  T
Q  309 g 309  Q
    |    
T  39461162 g 39461162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 36720874 - 36720771
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || ||||||| |||||||| ||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||    
T  36720874 accatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttt 36720775  T
Q  300 acca 303  Q
    ||||    
T  36720774 acca 36720771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 18164840 - 18164914
Alignment:
Q  224 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 298  Q
    |||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||    
T  18164840 ccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactt 18164914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 20869588 - 20869662
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  20869588 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 20869662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 30454187 - 30454261
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  30454187 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 30454261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 30962864 - 30962929
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  30962864 tttttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttt 30962929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 35261757 - 35261648
Alignment:
Q  202 accatttgatgtattgtatgcg-ccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| ||  |||||| |||||||| ||||||||||||||||| ||| ||||||| ||||||||| |  ||||||||||||||||||    
T  35261757 accatttggtgtattgtacgcaaccttaccctgttttttacacaagagactgtttccagggcttgaacccgtgaccttccagtcacatgacaacaacttt 35261658  T
Q  300 accaattgcg 309  Q
    |||| |||||    
T  35261657 accagttgcg 35261648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 26954176 - 26954104
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaatt 306  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||   ||||||||||||||||||||||||||    
T  26954176 tttttacacaagaggctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttaccaatt 26954104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 28817683 - 28817791
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||| | ||||||||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||    
T  28817683 accattgggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttt 28817782  T
Q  300 accaattgc 308  Q
    |||| ||||    
T  28817783 accagttgc 28817791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 20284164 - 20284232
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||| ||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||    
T  20284164 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 20284232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 21070793 - 21070861
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||| ||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||    
T  21070793 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 21070861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 29521742 - 29521851
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || ||||||| |||||||| | ||||||| ||||||| ||||||||||| ||||||||| |  ||||| ||||||||||||    
T  29521742 accatttggtgtattgtacgcagccttaccctgttttttaaacaagaggctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaacttt 29521841  T
Q  300 accaattgcg 309  Q
    | || |||||    
T  29521842 atcagttgcg 29521851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 309
Target Start/End: Original strand, 7136619 - 7136695
Alignment:
Q  233 gtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||||||||  |||||| ||||||||||| | ||||||| |  |||||||||||||||||||||| |||||    
T  7136619 gtttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccagttgcg 7136695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 14018060 - 14018128
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||||||||||||| | ||||||||| | ||||||||| ||||| |||||||||| |||||    
T  14018060 tttttacacaagagactgtttccaagacttgaacccatgacctttcaatcacgtgacaacaacattacc 14018128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 6760866 - 6760791
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||    ||| |||||||||||||||||| |||||    
T  6760866 tttttacacaagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttaccagttgcg 6760791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 24245491 - 24245421
Alignment:
Q  237 ttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||| ||||||| ||||| ||||||||||| |||||||||||  |||||||||||||||||||||| ||||    
T  24245491 ttacataagagac-gtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgc 24245421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 24365151 - 24365218
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    |||||||||||||| ||||||||||| ||||||| |||||| |||   ||||||||||||||||||||    
T  24365151 tttttacacaagaggctgtttctagggcttgaacccgtgacattttagtcacatgacaacaactttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 25250566 - 25250497
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    ||||||||||| || ||||||| |||||||||||  |||||||| |  ||||||||||||||||||||||    
T  25250566 tttttacacaataggctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaactttacca 25250497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 44530227 - 44530118
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || ||||||| |||||||| |||||||||  |||||| | ||||||||| |||||||||    |||||||||| |||||||    
T  44530227 accatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaagacttgaacccgtgaccttctagtcacatgacagcaacttt 44530128  T
Q  300 accaattgcg 309  Q
    |||| |||||    
T  44530127 accagttgcg 44530118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 296
Target Start/End: Complemental strand, 31457251 - 31457155
Alignment:
Q  201 taccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaac 296  Q
    ||||||||||||||||||| || |||||   || ||||||||||||||  |||||  ||||||||||| |||||||||||   ||||||||||||||    
T  31457251 taccatttgatgtattgtacgcagccttttcctatttttacacaagaggttgtttacaggacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 42083790 - 42083858
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||||| || ||||||| ||||||||||| |||||||||||  |||| ||||||||| ||||||    
T  42083790 tttttacacaaaaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaattttacc 42083858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 44781585 - 44781665
Alignment:
Q  223 gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||| |||| |||||||||||||  |||||| ||||||||||| ||||| |||||  |||| ||||||||||||||||    
T  44781585 gccttaccctgtcttttacacaagaggttgtttccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc 44781665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 302
Target Start/End: Original strand, 44742580 - 44742678
Alignment:
Q  206 tttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||| ||||||||| || ||||||| |||||||| ||||| |||| |||||| || |||||||||| ||||||| | |||||  |||||||||||||||    
T  44742580 tttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaactcatgaccttacaatcacgcgacaacaactttacc 44742678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 8897855 - 8897924
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||||||||||| |  |||||| ||||||| ||| ||||||||| |  ||||||||||||||||||||||    
T  8897855 tttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacatgacaacaactttacca 8897924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 311
Target Start/End: Complemental strand, 12625968 - 12625856
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt--acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 298  Q
    |||||||| |||||||||||| | ||||| ||||||||  |||||||||  |||||| ||||||||| | ||||||||     ||||| |||||||||||    
T  12625968 accatttggtgtattgtatgcagtcttaccctgtttttttacacaagaggttgtttccaggacttgagcccgtgacctacaagtcacacgacaacaactt 12625869  T
Q  299 taccaattgcgtg 311  Q
    ||||| |||||||    
T  12625868 taccagttgcgtg 12625856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 22598201 - 22598133
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||||||||  |||||| |||| |||||| |||||||||||  |||  ||||||||||||||||    
T  22598201 tttttacacaagaggttgtttccaggatttgaacccgtgacctttcagtcatgtgacaacaactttacc 22598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 292
Target Start/End: Original strand, 23000276 - 23000365
Alignment:
Q  202 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaa 292  Q
    |||||||| |||||||||||   ||||||  |||||||||||||||| ||||||| |||||||  || |||||||||||  |||||||||||    
T  23000276 accatttggtgtattgtatggaaccttaccgtgtttttacacaagaggctgtttccaggactt--acccgtgacctttcagtcacatgacaa 23000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 35105966 - 35105902
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||   ||| |||||||||||||    
T  35105966 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagccacgtgacaacaacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 11748343 - 11748269
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    |||||||| ||||| ||||||| | ||||||||| |||||| ||||  |||||||||||||| || |||| ||||    
T  11748343 tttttacaaaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaatttcaccagttgc 11748269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 11001069 - 11001109
Alignment:
Q  262 ttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||| || |||||||| ||||||||||||||||||||||    
T  11001069 ttgaacccgcgacctttcaatcacatgacaacaactttacc 11001109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 26457759 - 26457691
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||||||| ||| ||| || ||| ||||| | ||||||||| |||||  |||||||||||||||    
T  26457759 tttttacacaagaaactctttttaagacctgaacccatgacctttcaatcacgcgacaacaactttacc 26457691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 40607839 - 40607891
Alignment:
Q  258 ggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcgt 310  Q
    |||||||||||| |||| || |  | |||||||||||||||||||||||||||    
T  40607839 ggacttgaactcatgacattccagttacatgacaacaactttaccaattgcgt 40607891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 207 - 310
Target Start/End: Complemental strand, 9161195 - 9161091
Alignment:
Q  207 ttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaat 305  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||||| |||||||||||  ||||||||||  ||||||||||||||||||||| ||    
T  9161195 ttgatgtattgtacgcagccttactctgtttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccgat 9161096  T
Q  306 tgcgt 310  Q
    |||||    
T  9161095 tgcgt 9161091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 1347040 - 1346933
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||| | ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  1347040 accatttggtgtattgtacgcagccttaccctgtttt-acacaagtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 1346942  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  1346941 ccagttgcg 1346933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 1354814 - 1354921
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  1354814 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaacttta 1354912  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  1354913 ccagttgcg 1354921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 6024277 - 6024201
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcgt 310  Q
    |||||||||||||| |||||||||||| |||||  ||||||||| | ||||||||||||||||||||||| ||||||    
T  6024277 tttttacacaagaggctgtttctaggatttgaaaccgtgaccttccaatcacatgacaacaactttaccagttgcgt 6024201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 12221983 - 12222083
Alignment:
Q  211 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||| || ||||||| ||||||| |||||||||| ||||||| | ||||||||| |||||||||||  |||||||||||||||||||||| ||||    
T  12221983 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgc 12222082  T
Q  309 g 309  Q
    |    
T  12222083 g 12222083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 3815168 - 3815243
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||||| || ||||||| ||||||||||| |||||| ||||  |||||||||||||||||||||| |||||    
T  3815168 tttttacacaatagtctgtttccaggacttgaacccgtgacatttcagtcacatgacaacaactttaccagttgcg 3815243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 295
Target Start/End: Original strand, 29355923 - 29356009
Alignment:
Q  211 tgtattgtatgc-gccttactctgttt-ttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaa 295  Q
    ||||||||| || ||||||| |||||| ||||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||    
T  29355923 tgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 29356009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 14975171 - 14975239
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||||| ||||||| ||||||||||  ||||||||| |  |||||||||||||||||||||    
T  14975171 tttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttacc 14975239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 8409287 - 8409212
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||||||| | ||||| ||||||||||  |||||||||||  |||||| ||||||||||||||| |||||    
T  8409287 tttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaactttaccagttgcg 8409212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 20400711 - 20400636
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||||||||| |||||| |  ||||||||  ||||||||||  |||||||||||||||| |||||||||||    
T  20400711 tttttacacaagagattgtttccataacttgaacctgtgacctttcagtcacatgacaacaactataccaattgcg 20400636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 24734677 - 24734602
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||||||||  |||||| |||| |||||||  |||||||||  |||||||||||||||||||||| |||||    
T  24734677 tttttacacaagaggttgtttcaaggatttgaacttttgacctttcagtcacatgacaacaactttaccagttgcg 24734602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 2166504 - 2166570
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||  |||||| |||||||||||||    
T  2166504 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2166570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 2178137 - 2178203
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||  |||||| |||||||||||||    
T  2178137 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2178203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 13905036 - 13905138
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| || ||||||||| ||||||| ||||||| ||||||||||   ||||  ||||||||| | |||||||||||  ||||||||||||||||||    
T  13905036 accatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttcagtcacatgacaacaacttt 13905135  T
Q  300 acc 302  Q
    |||    
T  13905136 acc 13905138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 308
Target Start/End: Complemental strand, 8417504 - 8417442
Alignment:
Q  246 agactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    |||||||||| | ||| |||||||||||| ||||  |||||||||||||||||||||| ||||    
T  8417504 agactgtttccatgacctgaactcgtgacatttcagtcacatgacaacaactttaccagttgc 8417442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 12063511 - 12063445
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||| ||||||| || |||||||||||||||| |||||||||||  || ||||| ||||||||||    
T  12063511 tttttatacaagaggctatttctaggacttgaacccgtgacctttcagtctcatgataacaacttta 12063445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 14553555 - 14553482
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    |||||||||||||  || |||| |||||||||||  ||||||||| | |||||||||||||||||||||| ||||    
T  14553555 tttttacacaagaagctatttccaggacttgaacctgtgacctttag-tcacatgacaacaactttaccagttgc 14553482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 12889495 - 12889402
Alignment:
Q  211 tgtattgtatgc-gccttactctgttttta-cacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||| ||||| | ||||||||| |||||||| ||||||  | |||||||||  ||||||||||  |||| ||||||||||||||||    
T  12889495 tgtattgtatgcagccttgccctgtttttaacacaagaggctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttacc 12889402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 15866128 - 15866197
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||||||  ||||| ||||||| |||| |||||| | ||||||||| |||||||| ||||||||||||||    
T  15866128 tttttacttaagaggctgtttccaggaattgaacccatgacctttcaatcacatgccaacaactttacca 15866197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 28007671 - 28007604
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcga--tcacatgacaacaacttta 300  Q
    ||||||||||||| || |||| ||||||||||| ||||||||||  |  |||||||||||||||||||    
T  28007671 ttttacacaagaggctctttccaggacttgaacccgtgaccttttcatgtcacatgacaacaacttta 28007604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 24097625 - 24097556
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||||| ||||||| ||| ||| ||||||| |||||||||||||||  | |||||||| ||| |||||||    
T  24097625 tttttatacaagaggctggttcgaggacttaaactcgtgacctttcagtaacatgacatcaattttacca 24097556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 33138911 - 33138838
Alignment:
Q  202 accatttgatgtattgtatgcg-ccttactctgttttt-acacaagagactgtttctaggacttgaactcgtga 273  Q
    |||||||| ||||||||| ||| ||||||||||||||| | |||||||  |||||| ||||||||||| |||||    
T  33138911 accatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtttccaggacttgaacccgtga 33138838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 32068137 - 32068074
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    ||||||||||||||   ||||| | |||||||||  ||||||||||| |||| ||||||||||||||    
T  32068137 tttttacacaagag---gtttccaagacttgaacatgtgacctttcggtcacgtgacaacaacttta 32068074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 12023976 - 12024084
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  12023976 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 12024075  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  12024076 ccagttgcg 12024084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 25249795 - 25249903
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| |||||| |||||||||||||||||| | ||||||||| ||||||||| |  |||||||||||||||||||    
T  25249795 accatttggtgtattgtacgcagccttaccctgtttgtacacaagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaacaacttta 25249894  T
Q  301 ccaattgcg 309  Q
    |||||||||    
T  25249895 ccaattgcg 25249903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 8455373 - 8455482
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || ||||||| |||| ||||||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||    
T  8455373 accatttggtgtattgtacgcagccttaccctgtgttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttt 8455472  T
Q  300 accaattgcg 309  Q
    |||| |||||    
T  8455473 accagttgcg 8455482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 17896303 - 17896227
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcgt 310  Q
    ||||||||||||||  |||||||||||||||||  |||||||||||| |||||||||||||||||||||| ||||||    
T  17896303 tttttacacaagaggttgtttctaggacttgaatccgtgacctttcggtcacatgacaacaactttaccagttgcgt 17896227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 11514514 - 11514405
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || |||||||| ||||||| ||||||||| ||||||| |||| |||||| ||||||||| |  ||||||||||||||||||    
T  11514514 accatttggtgtattgtacgcagccttactttgttttttacacaagaggctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaacttt 11514415  T
Q  300 accaattgcg 309  Q
    |||| |||||    
T  11514414 accagttgcg 11514405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 308
Target Start/End: Original strand, 24200686 - 24200790
Alignment:
Q  206 tttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||| ||||||||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| |||||| ||||  ||||||||||||||||||||||    
T  24200686 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttacca 24200785  T
Q  304 attgc 308  Q
     ||||    
T  24200786 gttgc 24200790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 14530362 - 14530287
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||| ||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  14530362 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 14530287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 211 - 303
Target Start/End: Complemental strand, 7214603 - 7214509
Alignment:
Q  211 tgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    ||||||||| || ||||||| |||| ||||||||||||||||||||| | ||||||||| | |||||||||  ||||||||||||||||||||||    
T  7214603 tgtattgtacgcagccttaccctgtattttacacaagagactgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttacca 7214509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 301
Target Start/End: Original strand, 45235910 - 45235976
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||  |||||||| |||||||||||    
T  45235910 ttttacagaagagactgtttctaggacttgaactcgtgatctttcagtcacatgagaacaactttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 309
Target Start/End: Complemental strand, 10543772 - 10543667
Alignment:
Q  206 tttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||| ||||||||| || ||||||| |||||||| ||||||||| | ||||| ||||||||||| |||||||||||  ||||||||||||||||||| ||    
T  10543772 tttggtgtattgtacgcagccttaccctgttttttacacaagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttatca 10543673  T
Q  304 attgcg 309  Q
     |||||    
T  10543672 gttgcg 10543667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 308
Target Start/End: Complemental strand, 23397809 - 23397736
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||||||| ||||||| ||||||||||| | |||||||||  |||||||||||||||||||||| ||||    
T  23397809 ttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgc 23397736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 21377164 - 21377232
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||||||||  |||||||| ||||||||||||| |||||||  |||||||||||||||||||||    
T  21377164 tttttacacaagaggatgtttctatgacttgaactcgtaacctttcagtcacatgacaacaactttacc 21377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 21779318 - 21779425
Alignment:
Q  202 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| ||  |||||| ||||||| ||||||||| |||| || ||||||||||| |||||||||||  ||||||||||||||||| |    
T  21779318 accatttggtgtattgtacgcaaccttaccctgtttt-acacaagaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaacttca 21779416  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  21779417 ccagttgcg 21779425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 17623642 - 17623539
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctg-tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || ||||||| ||| ||||||||||||||  |||||| ||||||||||| ||||||||| |  || |||||||||||||||    
T  17623642 accatttggtgtattgtacgcagccttaccctgatttttacacaagaggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaacttt 17623543  T
Q  300 acca 303  Q
    ||||    
T  17623542 acca 17623539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 17668080 - 17667977
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctg-tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || ||||||| ||| ||||||||||||||  | |||| ||||||||||| ||||||||| |  ||||||||||||||||||    
T  17668080 accatttggtgtattgtacgcagccttaccctgatttttacacaagaggttctttccaggacttgaacccgtgaccttccagtcacatgacaacaacttt 17667981  T
Q  300 acca 303  Q
    ||||    
T  17667980 acca 17667977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 22371132 - 22371032
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||||||||  ||| ||||||| ||||||||||| ||||||||  |  |||||||||||||||||||    
T  22371132 accatttggtgtattgtacgcagccttaccctgtttttacac--gaggctgtttccaggacttgaacccgtgacctcccagtcacatgacaacaacttta 22371035  T
Q  301 cca 303  Q
    |||    
T  22371034 cca 22371032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 25079809 - 25079884
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||||||||  |||||||| ||||||||| ||||||||| |  |||||||||||||||||||||| |||||    
T  25079809 tttttacacaagaggttgtttctaagacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcg 25079884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 5841072 - 5841006
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    ||||||||||| || ||||||||||||||||||| ||||||||| |  |||||||||||||||||||    
T  5841072 tttttacacaaaaggctgtttctaggacttgaacccgtgaccttccagtcacatgacaacaacttta 5841006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 9671257 - 9671156
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcga-tcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| |||| |||||| |||||| |||| | ||||||||||||||||||    
T  9671257 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaacttt 9671159  T
Q  300 acc 302  Q
    |||    
T  9671158 acc 9671156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 17380317 - 17380391
Alignment:
Q  224 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 298  Q
    |||||| |||||| ||||||||||  |||||| | ||||||||| |||||||||||| |||||||||||||||||    
T  17380317 ccttaccctgtttatacacaagaggttgtttccaagacttgaacccgtgacctttcggtcacatgacaacaactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 17705551 - 17705465
Alignment:
Q  223 gccttactctgtt-tttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||||||| |||||||||||| | ||||| ||||||||||| |||||||||    |||||||||||||||||||||| ||||    
T  17705551 gccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttaccagttgc 17705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 19977805 - 19977874
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||||||| ||||| ||||||| || |||||||| |||||||||||| ||||||||||||||||| ||||    
T  19977805 tttttacaaaagaggctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaacttcacca 19977874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 99361 - 99421
Alignment:
Q  241 acaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    ||||||| ||||||||||||||||||| |||||||||||  |||| |||||||||||||||    
T  99361 acaagaggctgtttctaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 27573698 - 27573590
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || |||||||  ||||| |||||||||| ||||| |  ||||||||||   |||||||||  |||||||||||||||||||    
T  27573698 accatttggtgtattgtacgcagccttaccatgtttatacacaagaggctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaacttta 27573599  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  27573598 ccagttgcg 27573590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 29419980 - 29420048
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||  |||  ||||||||||||||||    
T  29419980 tttttacacaagaggttgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaactttacc 29420048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 44604907 - 44604832
Alignment:
Q  225 cttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    ||||| |||||||||||||||||  |||||| |||||||||||  |||||||| |  |||||||||||||||||||    
T  44604907 cttaccctgtttttacacaagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaacttta 44604832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 5450329 - 5450263
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    ||||||||||||||  |||||| |||| |||||| |||||||||||  |||||||||||||||||||    
T  5450329 tttttacacaagaggttgtttccaggaattgaacccgtgacctttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 14444784 - 14444730
Alignment:
Q  223 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctt 277  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  14444784 gccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctt 14444730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 4516442 - 4516510
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||||| |||||||||| |||||||   ||||||||||  |||| ||||||||||||||||    
T  4516442 tttttacacaagaggctgtttctagaacttgaatatgtgacctttcagtcacgtgacaacaactttacc 4516510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 33795329 - 33795261
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||| ||||||  ||||||  |||||||||| ||||||||||| ||||| ||||||||||||||||    
T  33795329 tttttacccaagaggttgtttccgggacttgaacccgtgacctttcaatcacgtgacaacaactttacc 33795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 304
Target Start/End: Original strand, 40416962 - 40417032
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaa 304  Q
    |||||| |||||||  |||||| | ||||||||| ||||||||| |  |||||||||||||||||||||||    
T  40416962 tttttatacaagaggttgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttaccaa 40417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 39914397 - 39914466
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    ||||||||||||||  |||||| || |||||| | ||||||||| |  ||||||||||||||||||||||    
T  39914397 tttttacacaagaggttgtttccagtacttgatcccgtgaccttccagtcacatgacaacaactttacca 39914466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 302
Target Start/End: Original strand, 44521431 - 44521532
Alignment:
Q  203 ccatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    ||||||| |||||| ||||| |||||||  |||||| ||||||||||| |||||| | || |||||| |||||||||||  |||| ||| ||||||||||    
T  44521431 ccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagatttgaacgcgtgacctttcagtcacgtgataacaacttta 44521530  T
Q  301 cc 302  Q
    ||    
T  44521531 cc 44521532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 26684712 - 26684788
Alignment:
Q  234 tttttacacaagaga-ctgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||||||||  ||||||  ||||||| |||   ||||||||| ||||||||||||||||||||||| |||||    
T  26684712 tttttacacaagaggtctgttttcaggacttaaacctttgacctttcaatcacatgacaacaactttaccagttgcg 26684788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 4852305 - 4852364
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaac 293  Q
    ||||| |||||||||||||||  ||||||||||| | |||| ||||| ||||||||||||    
T  4852305 ttttttcacaagagactgtttgcaggacttgaacccctgacttttcggtcacatgacaac 4852364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 309
Target Start/End: Complemental strand, 14544103 - 14544032
Alignment:
Q  238 tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||| ||||||| || || || ||  || |||||||  ||||||||||||||||||||||||||||    
T  14544103 tacacaagaggctgtttccagtacctggacctgtaacctttcagtcacatgacaacaactttaccaattgcg 14544032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 293
Target Start/End: Complemental strand, 25641554 - 25641487
Alignment:
Q  226 ttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaac 293  Q
    |||| ||||||| |||||| |  ||||||| ||||||||||| |||||||||||  ||||||||||||    
T  25641554 ttaccctgttttcacacaaaatgctgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 44643579 - 44643497
Alignment:
Q  223 gccttactctgtttttacac--aagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    ||||||||||||||||  ||  ||||| || ||||||| |||||||| |||||||||||  ||||||||  ||||||||||||    
T  44643579 gccttactctgtttttttacggaagaggctctttctagaacttgaacacgtgacctttcagtcacatgatgacaactttacca 44643497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 17473015 - 17472949
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    ||||||||||| || || |||||| ||| ||||| ||||||||||| ||||  ||||||||||||||    
T  17473015 tttttacacaataggctatttctaagacctgaacccgtgacctttcaatcatttgacaacaacttta 17472949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 23145755 - 23145857
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||| ||| ||||||||| || ||||||| ||||||| |||||||||| ||||||  | ||||||||| |||||||||||  ||||   |||||||||||    
T  23145755 accaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctacaacaacttt 23145854  T
Q  300 acc 302  Q
    |||    
T  23145855 acc 23145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 23557545 - 23557647
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||| ||| ||||||||| || ||||||| ||||||| |||||||||| ||||||  | ||||||||| |||||||||||  ||||   |||||||||||    
T  23557545 accaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctacaacaacttt 23557644  T
Q  300 acc 302  Q
    |||    
T  23557645 acc 23557647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 10546241 - 10546161
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt--acacaagagactgtttctaggacttgaactcgtgacctttc 279  Q
    |||||||| ||||||||| || ||||||| ||||||||  | |||||||  |||||| ||||||||||| |||||||||||    
T  10546241 accatttggtgtattgtacgcagccttaccctgtttttttatacaagaggatgtttccaggacttgaacccgtgacctttc 10546161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 309
Target Start/End: Original strand, 24860044 - 24860152
Alignment:
Q  201 taccatttgatgtattgtatgcgccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    ||||||||| ||||||||| ||  | |||  ||||||||||| ||||  |||||| ||| ||| ||| ||| ||||| |  |||||||||||||| ||||    
T  24860044 taccatttggtgtattgtacgcagcctaccatgtttttacaccagaggttgtttccagggcttaaacccgtaaccttccagtcacatgacaacaatttta 24860143  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  24860144 ccagttgcg 24860152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 31821447 - 31821491
Alignment:
Q  249 ctgtttctaggacttgaactcgtgacctttcgatcacatgacaac 293  Q
    ||||||||| |||||||||||||||||||||  |||||| |||||    
T  31821447 ctgtttctacgacttgaactcgtgacctttcagtcacataacaac 31821491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 41014396 - 41014288
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||    
T  41014396 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 41014297  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  41014296 ccagttgcg 41014288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 27328821 - 27328720
Alignment:
Q  211 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||| || ||||||| |||||||| ||||||||||||||||| |||||||||||  ||||||||||  |||||||||||||||||||||||||||    
T  27328821 tgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccaattgc 27328722  T
Q  309 gt 310  Q
    ||    
T  27328721 gt 27328720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 8170041 - 8170148
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||| |||||| || ||||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  8170041 accatttggtgtattgtacgcagccttaccctgtttt-acacaaaaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaacttta 8170139  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  8170140 ccagttgcg 8170148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 308
Target Start/End: Original strand, 37024646 - 37024719
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| ||||    
T  37024646 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgc 37024719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 22907922 - 22908014
Alignment:
Q  202 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaac 293  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||| | |||||||||  |||||| |||||    
T  22907922 accatttggtgtattgtatgcaaccttactctgtttttacacaagaggctgtttcttggacttgaacccttgacctttcagtcacataacaac 22908014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 309
Target Start/End: Complemental strand, 38879650 - 38879550
Alignment:
Q  211 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||| || ||||||| |||||||| | ||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| ||||    
T  38879650 tgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgc 38879551  T
Q  309 g 309  Q
    |    
T  38879550 g 38879550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 43334246 - 43334171
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||| ||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  43334246 tttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 43334171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 2838856 - 2838754
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgaccttt-cgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||  ||||||||  ||||||| |||||||||||| |  ||||||||||||||||||    
T  2838856 accatttggtgtattgtacgcagccttaccctgtttttacacaagatgctgtttctgagacttgacctcgtgacctttacagtcacatgacaacaacttt 2838757  T
Q  300 acc 302  Q
    |||    
T  2838756 acc 2838754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 309
Target Start/End: Complemental strand, 35710356 - 35710282
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||  | |||||||||||||||||||| |||||    
T  35710356 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaactttaccagttgcg 35710282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 302
Target Start/End: Original strand, 208989 - 209086
Alignment:
Q  206 tttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||| ||||||| |||| ||||||| |||||||||||||||||  |||| | |||||||||||| |||||||||   |||||||||||||||||||||    
T  208989 tttggtgtattgaatgcagccttaccctgtttttacacaagaggttgttgccaggacttgaacttgtgaccttttagtcacatgacaacaactttacc 209086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 22861758 - 22861823
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||  |||||||||||||||||||    
T  22861758 ttttacacaagagactgcttctaggacttgaatccgtgacctttcagtcacatgacaacaacttta 22861823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 24448968 - 24448859
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || ||||||| || ||||| |||||| || ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||    
T  24448968 accatttggtgtattgtacgcagccttaccctattttttacacaaaaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttt 24448869  T
Q  300 accaattgcg 309  Q
    |||| |||||    
T  24448868 accagttgcg 24448859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 4619172 - 4619272
Alignment:
Q  211 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||| || ||||||| ||||||| |||||||||| || |||| ||||||||||| ||||||||| |  |||||||||||||||||||||| ||||    
T  4619172 tgtattgtacgcagccttaccctgttttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 4619271  T
Q  309 g 309  Q
    |    
T  4619272 g 4619272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 308
Target Start/End: Complemental strand, 31299705 - 31299602
Alignment:
Q  206 tttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaa 304  Q
    |||||||||||||| || |  |||| ||||||| | ||||||| |||||||||||||||||||| ||||||| |   ||||||||||||||||||||||     
T  31299705 tttgatgtattgtacgcagttttacactgttttaatacaagaggctgtttctaggacttgaactagtgacctgtaagtcacatgacaacaactttaccag 31299606  T
Q  305 ttgc 308  Q
    ||||    
T  31299605 ttgc 31299602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 32703500 - 32703411
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgaca 291  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||    
T  32703500 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 1850717 - 1850624
Alignment:
Q  202 accatttgatgtattgtatgcgcc-ttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaaca 294  Q
    |||||||||||||||||| || || ||| ||||||||||||||||||  | ||||  |||||||||| |||||||||||  |||||||||||||    
T  1850717 accatttgatgtattgtacgcacccttattctgtttttacacaagaggttatttccgggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 23974824 - 23974756
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||||||||  |||||| ||||||||||| ||||||||| |  |||||||||||||||||||||    
T  23974824 tttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 23974756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 298
Target Start/End: Original strand, 34074653 - 34074717
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 298  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||  |||  ||||||||||||    
T  34074653 tttttacacaagaggctgtttctaggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 1565475 - 1565400
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||| ||||||  |||||| ||||||||||| || ||||||||  |||||||||||||||||||||| |||||    
T  1565475 tttttactcaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttaccagttgcg 1565400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 22187329 - 22187262
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    |||||||||||||| ||||||| ||||||| |||  ||||||||||  ||| ||||||||||||||||    
T  22187329 tttttacacaagaggctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttac 22187262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 28516525 - 28516593
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||||||||  |||||| | ||||||||| |||||||||||   ||| ||||||||||||||||    
T  28516525 tttttacacaagaggatgtttccaagacttgaacccgtgacctttcagccacctgacaacaactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 22600532 - 22600429
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| |||||||||  | ||||||| |||| |||||||||| | | |||||| ||||||||||| ||| ||||| |  |||||||| |||||||||    
T  22600532 accatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggacttgaacccgtaaccttccagtcacatgataacaacttt 22600433  T
Q  300 acca 303  Q
    ||||    
T  22600432 acca 22600429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 39079882 - 39079925
Alignment:
Q  259 gacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||| |||||||||||  |||||||||||||||||||||    
T  39079882 gacttgaacccgtgacctttctgtcacatgacaacaactttacc 39079925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 302
Target Start/End: Complemental strand, 39301178 - 39301099
Alignment:
Q  224 ccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||| ||||||| ||||||||||  |||| | | ||||||||| |||||||||||  | |||||||||||||||||||    
T  39301178 ccttaccctgttttatacacaagaggttgttcccaagacttgaacccgtgacctttcagtaacatgacaacaactttacc 39301099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 275
Target Start/End: Complemental strand, 43574684 - 43574609
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacc 275  Q
    |||||||| | ||||||| || ||||||| ||||||| ||||||||||| |||||| ||||||||||| |||||||    
T  43574684 accatttggtatattgtacgcagccttaccctgttttctacacaagagattgtttccaggacttgaacacgtgacc 43574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 9794473 - 9794511
Alignment:
Q  257 aggacttgaactcgtgacctttcgatcacatgacaacaa 295  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  9794473 aggacttgaacccgtgaccttttgatcacatgacaacaa 9794511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 303
Target Start/End: Complemental strand, 17419943 - 17419889
Alignment:
Q  249 ctgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    ||||||| ||||||||||||||| |||||||  |||||| ||||||| |||||||    
T  17419943 ctgtttccaggacttgaactcgtaacctttcagtcacattacaacaattttacca 17419889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 19143000 - 19143066
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaac 267  Q
    |||||||| |||| |||| || ||||||| |||||||||||||||||  |||||| |||||||||||    
T  19143000 accatttggtgtactgtacgcagccttaccctgtttttacacaagaggttgtttccaggacttgaac 19143066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 22025587 - 22025542
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttc 279  Q
    |||||||||||||| ||||||| ||||||||||| | |||||||||    
T  22025587 tttttacacaagaggctgtttccaggacttgaacccatgacctttc 22025542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 31362454 - 31362495
Alignment:
Q  262 ttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||||| ||||||||| | |||||||||||||||||||||||    
T  31362454 ttgaacccgtgaccttccaatcacatgacaacaactttacca 31362495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 10634253 - 10634301
Alignment:
Q  250 tgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 298  Q
    |||||||||||||||||| | |||||||||  |||| ||||||||||||    
T  10634253 tgtttctaggacttgaacccatgacctttcagtcacttgacaacaactt 10634301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 5648336 - 5648228
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||    
T  5648336 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttacagtcacatgacaacaacttta 5648237  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  5648236 ccagttgcg 5648228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 6430683 - 6430791
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| | ||||||||| |||||||||||  |||||||||||||||||||    
T  6430683 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaacttta 6430782  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  6430783 ccagttgcg 6430791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 14590916 - 14590806
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt--acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 298  Q
    ||||||||||||||||||||| ||||||| ||||||||  | ||||||| ||||||||||||||||||  |||||||||||  |||||||||||||||||    
T  14590916 accatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaactt 14590817  T
Q  299 taccaattgcg 309  Q
    ||||| |||||    
T  14590816 taccagttgcg 14590806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 30639462 - 30639349
Alignment:
Q  197 gtcttaccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaa 295  Q
    |||| |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| |||||||||||  ||||||||||  ||||| ||||||||    
T  30639462 gtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagagtctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaa 30639363  T
Q  296 ctttaccaattgcg 309  Q
    |||||||| |||||    
T  30639362 ctttaccagttgcg 30639349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 48598882 - 48598989
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  48598882 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 48598980  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  48598981 ccagttgcg 48598989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 54730293 - 54730218
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| | ||||||||||||||||||||| ||||||    
T  54730293 tttttacacaagaggctgtttctaggacttgaacccgtgaccttttggtcacatgacaacaactttaccgattgcg 54730218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 5306721 - 5306829
Alignment:
Q  202 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| ||  |||||| ||| ||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||| ||||||||    
T  5306721 accatttggtgtattgtacgcaaccttaccctgattttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacatcaacttta 5306820  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  5306821 ccagttgcg 5306829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 203 - 309
Target Start/End: Original strand, 11054206 - 11054312
Alignment:
Q  203 ccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    ||||||| ||||||||| || | ||||| ||||||| ||||||||||||||||  ||||||||||| |||||||||||  ||||||||||||||||||||    
T  11054206 ccatttggtgtattgtacgcagtcttaccctgtttt-acacaagagactgttttcaggacttgaacccgtgacctttcagtcacatgacaacaactttac 11054304  T
Q  302 caattgcg 309  Q
    || |||||    
T  11054305 cagttgcg 11054312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 47528587 - 47528693
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  47528587 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttta 47528685  T
Q  301 ccaattgc 308  Q
    ||| ||||    
T  47528686 ccagttgc 47528693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 40915906 - 40915804
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || |||||||  |||||||||||||||| ||||||| ||||||||||| |||||||||    |||||||||||||||||||    
T  40915906 accatttggtgtattgtacgcagccttaccttgtttttacacaagaggctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaacttta 40915807  T
Q  301 cca 303  Q
    |||    
T  40915806 cca 40915804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 309
Target Start/End: Complemental strand, 16911631 - 16911531
Alignment:
Q  211 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||| || ||||||| ||| ||| |||||||||| ||||||||||||||||||| ||||||||||   |||||||||||||||||||||| ||||    
T  16911631 tgtattgtacgcagccttaccctgatttgtacacaagaggctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgc 16911532  T
Q  309 g 309  Q
    |    
T  16911531 g 16911531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 20225060 - 20224953
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||| |||||||||  |||||| ||||||||||| | |||||||||  |||||||||||||||||||    
T  20225060 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggttgtttccaggacttgaacccatgacctttcagtcacatgacaacaacttta 20224962  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  20224961 ccagttgcg 20224953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 16408694 - 16408769
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||||| |||||    
T  16408694 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcg 16408769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 297
Target Start/End: Original strand, 39077886 - 39077948
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaact 297  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||||    
T  39077886 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 44363223 - 44363292
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||||||||| ||| ||||||  |||||||||||||||||||||||  ||||||||||||||||||||||    
T  44363223 tttttacacacgaggctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttacca 44363292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 310
Target Start/End: Original strand, 55830803 - 55830888
Alignment:
Q  226 ttactctgtttttacacaagagactgtttctaggacttgaactc-gtgacctttcgatcacatgacaacaactttaccaattgcgt 310  Q
    |||| ||||||  ||||||||||||||||| |  |||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  55830803 ttaccctgtttacacacaagagactgtttccaaaacttgaactccgtgaccttccgatcacatgacaacaactttaccagttgcgt 55830888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 17315378 - 17315457
Alignment:
Q  223 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||  ||||||||||||||||  |||||| |||| |||||| |||||||||||  |||||||||||||||||||||    
T  17315378 gccttaccttgtttttacacaagaggttgtttcgaggaattgaacccgtgacctttcagtcacatgacaacaactttacc 17315457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 21647008 - 21646933
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||||||| ||||||| |||||||||||  |||||||| |  |||||||||||||||||||||| |||||    
T  21647008 tttttacacaagaggctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttaccagttgcg 21646933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 30352682 - 30352757
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||||||| ||||||| ||||||  ||| |||||||||||| |||| ||||||||||||||||| |||||    
T  30352682 tttttacacaagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttaccagttgcg 30352757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 42164228 - 42164307
Alignment:
Q  223 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||| |||||||||||||||||  |||||| | ||||||||| |||||||||||  |||||||||||||| ||||||    
T  42164228 gccttaccctgtttttacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc 42164307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 298
Target Start/End: Original strand, 17043451 - 17043549
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 298  Q
    |||||||| ||||||||| || ||||||| |||| ||||||||||||| ||||||| |||||||||||  ||||||||||  |||| ||||||||||||    
T  17043451 accatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 47441587 - 47441689
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctg-tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| |||||||||  | ||||||| ||| |||||||| |||||||||||||| ||||||||||  ||||||||||  |||| |||||||||||||    
T  47441587 accatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctttcagtcacgtgacaacaacttt 47441686  T
Q  300 acc 302  Q
    |||    
T  47441687 acc 47441689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 203 - 299
Target Start/End: Original strand, 30496380 - 30496476
Alignment:
Q  203 ccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    ||||||| |||||||||||| ||||||| | || |||||||||||| ||||||| | ||||||||| |||||||||||  |||| |||||||||||||    
T  30496380 ccatttggtgtattgtatgcagccttaccc-gtgtttacacaagaggctgtttccatgacttgaacacgtgacctttcagtcacgtgacaacaacttt 30496476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 32478865 - 32478942
Alignment:
Q  223 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    ||||||| |||||||||||| ||||  |||||| |||||||||||  ||||||| ||| |||||||||||||||||||    
T  32478865 gccttaccctgtttttacactagaggttgtttccaggacttgaacctgtgacctctcggtcacatgacaacaacttta 32478942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 8473679 - 8473786
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| |||||||||||| ||||||| |||||   ||||||||| ||||||| ||||||||||| ||  ||||| || ||| |||||||||||||||    
T  8473679 accatttggtgtattgtatgcagccttaccctgttaa-acacaagaggctgtttccaggacttgaacccgcaaccttccggtcatatgacaacaacttta 8473777  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  8473778 ccagttgcg 8473786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 302
Target Start/End: Original strand, 12257688 - 12257752
Alignment:
Q  238 tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||  |||||||||||| |||||| ||||||||||| ||||| ||||||||||||||||    
T  12257688 tacacaagacgctgtttctaggatttgaacccgtgacctttcaatcacgtgacaacaactttacc 12257752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 304
Target Start/End: Complemental strand, 47444035 - 47443927
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctt----tcgatcacatgacaacaa 295  Q
    |||||||| ||||||||| || ||||||| |||||||| || |||||| ||||||| ||||||||||| |||||||||    ||| |||||||| |||||    
T  47444035 accatttggtgtattgtacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaacccgtgacctttcggtcggtcacatgagaacaa 47443936  T
Q  296 ctttaccaa 304  Q
    |||||||||    
T  47443935 ctttaccaa 47443927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 49938671 - 49938746
Alignment:
Q  224 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||| | ||||||||||||||| ||||||| |||||||||||  ||||||||||  |||| |||||||||||||    
T  49938671 ccttaccccgtttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaacttt 49938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 23580299 - 23580365
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||||||||| || ||||||| |||||||| |||||||||||  |||| ||||||||||||||    
T  23580299 tttttacacaagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 298
Target Start/End: Complemental strand, 54175137 - 54175043
Alignment:
Q  206 tttgatgtattgtatgc-gccttactctgtttttacacaagagactg-tttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 298  Q
    |||| ||||||||| || ||||||| ||||||||||||||||| ||| |||| ||||||||||  |||||| ||||  |||||||||||||||||    
T  54175137 tttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttttccaggacttgaatccgtgacatttcagtcacatgacaacaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 14983878 - 14983809
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||||||||||||| ||||||| | ||||||||  ||||||||| | |||| ||||||||||||||||||    
T  14983878 tttttacacaagaggctgtttcaaagacttgaatccgtgaccttccaatcatatgacaacaactttacca 14983809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 55766532 - 55766633
Alignment:
Q  211 tgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactc-gtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||| || ||||||| ||||||  |||||||| |||||||| |  |||||||| | |||||||| || |||||||||||||||||||||| ||||    
T  55766532 tgtattgtacgcagccttaccctgtttacacacaagaaactgtttccaaaacttgaaccccgtgaccttccggtcacatgacaacaactttaccagttgc 55766631  T
Q  309 gt 310  Q
    ||    
T  55766632 gt 55766633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 302
Target Start/End: Original strand, 487230 - 487294
Alignment:
Q  238 tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||||  |||||| | ||||||||| |||||||||||  |||||||||||||||||||||    
T  487230 tacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacc 487294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 37494929 - 37494821
Alignment:
Q  202 accatttgatgtattgtatgcg-ccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| | ||||||||||  |||||| |||||||| |||||||||  |||||| |||||||||||  ||||||||||  || |||| ||||||||||    
T  37494929 accatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcgcatggcaacaacttt 37494830  T
Q  300 accaattgc 308  Q
    |||| ||||    
T  37494829 accagttgc 37494821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 300
Target Start/End: Original strand, 9832370 - 9832468
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||  ||||||||||| |||||||||||  ||| || ||||||| ||||    
T  9832370 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgttttcaggacttgaacccgtgacctttcagtcagatcacaacaatttta 9832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 10660448 - 10660373
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||| |||||  |||||| |||||||||||  || |||||||  |||||||||||||||||||||| |||||    
T  10660448 tttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcg 10660373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 10874593 - 10874518
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||| |||||  |||||| |||||||||||  || |||||||  |||||||||||||||||||||| |||||    
T  10874593 tttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccagttgcg 10874518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 19027926 - 19027823
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||| ||| ||||||||| || ||||||| |||||||| ||||||||   |||||| ||||||||||| |||||||||||  |||| ||||||||||| |    
T  19027926 accaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactct 19027827  T
Q  300 acca 303  Q
    ||||    
T  19027826 acca 19027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 303
Target Start/End: Complemental strand, 25343261 - 25343162
Alignment:
Q  206 tttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||| ||||||||| || ||||||| |||||||| |||||||||||| |||| || ||||||||  ||||||| ||  |||| |||||||||||||||||    
T  25343261 tttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacctatcagtcacgtgacaacaactttacca 25343162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 302
Target Start/End: Original strand, 50856344 - 50856395
Alignment:
Q  251 gtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||||||||||| ||||||||||| ||||  ||||||||||||||||    
T  50856344 gtttctaggacttgaacccgtgacctttcaatcatgtgacaacaactttacc 50856395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 5313108 - 5313154
Alignment:
Q  257 aggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||| |||||| ||||||||||| |||||||||||||||||||||||    
T  5313108 aggaattgaacccgtgacctttcaatcacatgacaacaactttacca 5313154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 23501812 - 23501762
Alignment:
Q  259 gacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  23501812 gacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 23501762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 25463166 - 25463108
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaa 292  Q
    ||||||||||||||  |||||| ||||||||||| |||||||||||  |||||||||||    
T  25463166 tttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 30690274 - 30690340
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||||||||| || |||| ||||||||||| |||||||||||  |||| ||||||| ||||||    
T  30690274 tttttacacaagaggctttttccaggacttgaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 32629348 - 32629418
Alignment:
Q  223 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaac 293  Q
    ||||||| ||||||||  ||||||| ||||||| |||| |||||| |||||||||||  ||||||||||||    
T  32629348 gccttaccctgtttttttacaagaggctgtttcgaggatttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 7385567 - 7385628
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaa 295  Q
    |||||||||| ||| ||||||| ||| ||||||| |||||||||||  ||||||||||||||    
T  7385567 tttttacacatgaggctgtttccagggcttgaacccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 302
Target Start/End: Complemental strand, 43035289 - 43035224
Alignment:
Q  237 ttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||  ||||||  |||||||||| |||||||||||  |||| ||||||||||||||||    
T  43035289 ttacacaagaggttgtttcctggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 35567214 - 35567146
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||| | ||||||| | ||||||||| | |||||||||  | |||||||||||||||||||    
T  35567214 tttttacacaagtggctgtttccaagacttgaacccatgacctttcagttacatgacaacaactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 41018885 - 41018945
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaa 295  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||  |||| |||||||||    
T  41018885 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 54640430 - 54640498
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||||| ||||||| | ||||||||| |||||||||||   ||| ||||||||| ||||||    
T  54640430 tttttacacaagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttacc 54640498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 54967065 - 54966997
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||||||||  | |||| || ||||||||  ||||||||||  |||||||||||||||||||||    
T  54967065 tttttacacaagaggttctttccagaacttgaacatgtgacctttcagtcacatgacaacaactttacc 54966997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 7909338 - 7909397
Alignment:
Q  202 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctagga 260  Q
    |||||||| ||||||||| ||  |||||| ||||||||||||||||||||||||| ||||    
T  7909338 accatttggtgtattgtacgcaaccttaccctgtttttacacaagagactgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 44357274 - 44357195
Alignment:
Q  225 cttactctgttt-ttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||||||| ||| |||||||| ||  |||||||||||||||||||| |||||||||  | |||| |||| ||||||||||    
T  44357274 cttactctatttattacacaaaaggttgtttctaggacttgaactcatgacctttcagttacataacaataactttacca 44357195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 301
Target Start/End: Original strand, 3580952 - 3580994
Alignment:
Q  259 gacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    |||||||||||||||| ||||  ||||||||||||||||||||    
T  3580952 gacttgaactcgtgacttttcagtcacatgacaacaactttac 3580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 29207955 - 29208032
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 279  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| |  |||| ||||||||||| |||||||||||    
T  29207955 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggcaatttccaggacttgaacccgtgacctttc 29208032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 32632614 - 32632722
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||  ||| |||||||||||||||    
T  32632614 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaacttta 32632713  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  32632714 ccagttgcg 32632722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 34725155 - 34725262
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||  ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  34725155 accatttagtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 34725253  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  34725254 ccagttgcg 34725262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 38478339 - 38478438
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||  |||||||||||||| ||||    
T  38478339 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagttta 38478437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 47214610 - 47214503
Alignment:
Q  202 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| ||  |||||| ||||||| | ||||||||||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  47214610 accatttggtgtattgtacgcaaccttaccctgttttaa-acaagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 47214512  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  47214511 ccagttgcg 47214503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 236 - 302
Target Start/End: Complemental strand, 14617103 - 14617037
Alignment:
Q  236 tttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||| ||||||| |||||||||||||||||||||||  |||||||||||||||||||||    
T  14617103 tttacacaagaggctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaactttacc 14617037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 22930148 - 22930233
Alignment:
Q  224 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||| |||||||||||||| || ||||||| ||||||||||| | |||||||||  |||||||||||||||||||||| |||||    
T  22930148 ccttaccctgtttttacacaaaaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgcg 22930233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 303
Target Start/End: Original strand, 41319865 - 41319966
Alignment:
Q  204 catttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    |||||| ||||||||| || ||||||| ||||||| |||||||||||||||||| ||||||| |||  ||||||||||  ||||||||||||||||||||    
T  41319865 catttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttaaacctgtgacctttcagtcacatgacaacaactttac 41319964  T
Q  302 ca 303  Q
    ||    
T  41319965 ca 41319966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 18724636 - 18724704
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||    
T  18724636 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 18724704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 27474351 - 27474279
Alignment:
Q  231 ctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    ||||||||||||||||||||||||| | |||||||||  ||||||||||  ||||||||||||||||||||||    
T  27474351 ctgtttttacacaagagactgtttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacca 27474279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 45812594 - 45812701
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| |||||||||||| ||||||| || |||| ||||||||||||||||  |||||||||||  ||||||||||  |||||||||||||||||||    
T  45812594 accatttggtgtattgtatgcagccttaccctctttt-acacaagagactgttttcaggacttgaacctgtgacctttcagtcacatgacaacaacttta 45812692  T
Q  301 ccaattgcg 309  Q
     || |||||    
T  45812693 tcagttgcg 45812701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 202 - 310
Target Start/End: Original strand, 23768377 - 23768487
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || ||||||| ||||||| |||||||||| ||||||| | |||||||||  |||||||| |  ||||||||||||||||||    
T  23768377 accatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccatgacttgaacctgtgaccttacagtcacatgacaacaacttt 23768476  T
Q  300 accaattgcgt 310  Q
    |||| ||||||    
T  23768477 accagttgcgt 23768487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 45402164 - 45402087
Alignment:
Q  231 ctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||||||||||| ||||||| ||||||||||| ||| ||| ||| ||||||||||||||||||||||| |||||    
T  45402164 ctgtttttacacaagaggctgtttccaggacttgaacccgttacc-ttccatcacatgacaacaactttaccagttgcg 45402087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 11596613 - 11596512
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| |||||| || || ||||||| |||||||||||||||||  |||||||||||||||||| |||||| ||||  |||||||||| | ||||||    
T  11596613 accatttggtgtattatacgcagccttaccctgtttttacacaagaggttgtttctaggacttgaacccgtgacatttcagtcacatgacagccacttta 11596514  T
Q  301 cc 302  Q
    ||    
T  11596513 cc 11596512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 19414538 - 19414434
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||  ||||||| ||| ||||| || |||||||||||||||| |||||||||||  ||| |||||||||||||||    
T  19414538 accatttggtgtattgtacgcagccttaacctgtttt-acataagaggctctttctaggacttgaacccgtgacctttcagtcatatgacaacaacttta 19414440  T
Q  301 ccaatt 306  Q
    ||||||    
T  19414439 ccaatt 19414434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 25468320 - 25468421
Alignment:
Q  202 accatttgatgtattgtatgcg-ccttactctg-tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| ||  |||||| ||| ||||||||||||||  |||||| ||||||||||| | ||||||||| |||||||||||||||||||    
T  25468320 accatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttgaacccatgacctttcaatcacatgacaacaacttt 25468419  T
Q  300 ac 301  Q
    ||    
T  25468420 ac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 309
Target Start/End: Complemental strand, 18944735 - 18944635
Alignment:
Q  211 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||| || ||||||| |||||||| ||||||||| ||||||| ||| |||||||  ||||||||||  |||||||||||||||||||||| ||||    
T  18944735 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttaccagttgc 18944636  T
Q  309 g 309  Q
    |    
T  18944635 g 18944635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 30395794 - 30395894
Alignment:
Q  211 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| |||||||||    |||||||||||||||||||||| ||||    
T  30395794 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttaccagttgc 30395893  T
Q  309 g 309  Q
    |    
T  30395894 g 30395894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 20036285 - 20036218
Alignment:
Q  236 tttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    ||||||||||||  |||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  20036285 tttacacaagagtttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 20036218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 303
Target Start/End: Complemental strand, 27201744 - 27201645
Alignment:
Q  206 tttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||| ||||||||| || ||||||| |||||| | ||||||||| ||||||| ||||||||||| | |||||||||  ||||||||||||||||||||||    
T  27201744 tttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacca 27201645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 309
Target Start/End: Complemental strand, 34714678 - 34714615
Alignment:
Q  246 agactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||| | ||||||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  34714678 agactgtttccatgacttgaacccgtgacctttcaatcacatgacaacaactttaccagttgcg 34714615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 46248010 - 46248113
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || | ||||| ||||||| |||||||||| ||||||| | ||||||||| |||||| ||||  ||||||||||||||||||    
T  46248010 accatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaacttt 46248109  T
Q  300 acca 303  Q
    ||||    
T  46248110 acca 46248113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 302
Target Start/End: Original strand, 17470407 - 17470505
Alignment:
Q  206 tttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||| ||||||||| || ||||||| ||||||| |||||||||| ||||||||||||||||||| | ||||| |||  |||| ||||||||||||||||    
T  17470407 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattcagtcacgtgacaacaactttacc 17470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 20004183 - 20004257
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||| |||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||||| ||||    
T  20004183 tttttacacgagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 20004257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 46991871 - 46991797
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||||||||  |||||| ||||||||||| ||||||||| |  |||||||||||||||||||||| ||||    
T  46991871 tttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 46991797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 6925167 - 6925098
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||||||||||||| || |||| ||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  6925167 tttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 6925098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 10668292 - 10668212
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttc-----gatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||      ||||||||||||||||||||||| |||||    
T  10668292 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttaccagttgcg 10668212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 35117847 - 35117927
Alignment:
Q  223 gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||| |||| ||||||||||||| || |||| ||||||||||| |||||||||||  |||| ||||||||||||||||    
T  35117847 gccttaccctgtattttacacaagaggctatttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 33223054 - 33222983
Alignment:
Q  231 ctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||||||||||| ||||||| | ||||| ||  |||||||||||  |||||||||||||||||||||    
T  33223054 ctgtttttacacaagaggctgtttccatgacttaaatccgtgacctttcagtcacatgacaacaactttacc 33222983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 299
Target Start/End: Complemental strand, 9939521 - 9939463
Alignment:
Q  241 acaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||  |||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  9939521 acaagaggttgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttt 9939463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 301
Target Start/End: Original strand, 12126897 - 12126993
Alignment:
Q  205 atttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    ||||| ||||||||| || ||||||| ||||||| ||||||||  ||||||| || |||| ||| ||||||||||| || ||||||||||||||||||    
T  12126897 atttggtgtattgtacgcagccttaccctgtttt-acacaagaagctgtttccagaacttaaacccgtgacctttcaattacatgacaacaactttac 12126993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 22327166 - 22327101
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    ||||||||||||||  |||||| ||||||||||| || ||||||||  ||||||||||||||||||    
T  22327166 tttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttt 22327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 44485166 - 44485267
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || |||||||  ||| ||||||||||| |  |||||| ||||||  ||| ||||||||||| |||||||||||||||||||    
T  44485166 accatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggactataacccgtgacctttcaatcacatgacaacaacttt 44485265  T
Q  300 ac 301  Q
    ||    
T  44485266 ac 44485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 2435878 - 2435946
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||| ||||| ||| ||||||| ||||||||||| |||||||||||  |||| ||||||||||||||||    
T  2435878 ttttcacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2435946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 2435984 - 2436052
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||| |||  |||||| ||||||||||| |||||||||||  |||| ||||||||||||||||    
T  2435984 tttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2436052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 4430083 - 4430186
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || | ||||| ||||||| ||||||||| |||||||  | ||||| ||| ||||||||| |  ||||||||||||||||||    
T  4430083 accatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacatgacaacaacttt 4430182  T
Q  300 acca 303  Q
    ||||    
T  4430183 acca 4430186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 18335379 - 18335454
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||| ||||||||||||||| ||||||| |||| ||||||||||   |||||||||| ||||||| || |||||    
T  18335379 tttttaaacaagagactgtttccaggactttaacttgtgacctttcagacacatgacaaaaactttatcacttgcg 18335454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 25290232 - 25290162
Alignment:
Q  234 tttttacacaagagactgt--ttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||||| ||||  ||| | ||||||||| |||||||||||  |||||||||||||||||||||    
T  25290232 tttttacacaagaggctgtgtttccaagacttgaacacgtgacctttcagtcacatgacaacaactttacc 25290162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 8197110 - 8197036
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    |||||||||||||| |  || | ||||||||||| |||||||||||  ||||||||||||||||| |||| ||||    
T  8197110 tttttacacaagaggcaattaccaggacttgaacccgtgacctttcagtcacatgacaacaacttgaccagttgc 8197036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 267
Target Start/End: Complemental strand, 22324989 - 22324927
Alignment:
Q  206 tttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaac 267  Q
    |||| |||||||||||| ||||||| ||||||||||||||||| ||||||| | |||||||||    
T  22324989 tttggtgtattgtatgcagccttaccctgtttttacacaagaggctgtttccaagacttgaac 22324927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 35253244 - 35253321
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 279  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| ||||| |||||    
T  35253244 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttcgaggacttgaacccgtgatctttc 35253321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 27136743 - 27136811
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||||||||  |||| | || ||||||||||||| |||| | ||||| ||||||||||||||||    
T  27136743 tttttacacaagaggttgttcccagaacttgaactcgtgtccttccaatcacgtgacaacaactttacc 27136811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 40424786 - 40424734
Alignment:
Q  257 aggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||||| |||| ||||||  |||||||||||||||||||||| |||||    
T  40424786 aggacttgaacccgtggcctttcagtcacatgacaacaactttaccagttgcg 40424734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 302
Target Start/End: Original strand, 50760321 - 50760385
Alignment:
Q  238 tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||| ||||||  ||||||||||| |||||||| ||  |||||||||||| ||||||||    
T  50760321 tacacaagaggctgttttcaggacttgaacccgtgacctctcagtcacatgacaactactttacc 50760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 35005220 - 35005145
Alignment:
Q  206 tttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttc 279  Q
    |||| |||||||||||| ||||||| |||||||| ||||||||| ||||||  | ||||||||| |||||||||||    
T  35005220 tttggtgtattgtatgcagccttaccctgttttttacacaagaggctgttttcaagacttgaacccgtgacctttc 35005145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 303
Target Start/End: Original strand, 6983915 - 6983969
Alignment:
Q  249 ctgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    ||||||| |||||||||||  ||||||||||  |||| |||||||||||||||||    
T  6983915 ctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttacca 6983969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 31272432 - 31272510
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 279  Q
    ||||||||||||  |||| || |||||||  ||||||||||||||||  |||||| |||||||||||  ||||||||||    
T  31272432 accatttgatgtgctgtacgcagccttaccatgtttttacacaagaggttgtttccaggacttgaacctgtgacctttc 31272510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 19932869 - 19932918
Alignment:
Q  260 acttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||| | |||||||||  |||||||||||||||||||||| |||||    
T  19932869 acttgaacccatgacctttcagtcacatgacaacaactttaccagttgcg 19932918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 23371191 - 23371146
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttc 279  Q
    ||||||| |||| | ||||||||||||||||||| |||||||||||    
T  23371191 tttttacccaagtggctgtttctaggacttgaacccgtgacctttc 23371146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 18742051 - 18742127
Alignment:
Q  234 tttttacacaagagactgtttct-aggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||| |||| ||||||||||  | || |||||| | |||||||||  |||||||||||||||||||||| |||||    
T  18742051 tttttatacaaaagactgtttcccaagatttgaacccttgacctttcagtcacatgacaacaactttaccagttgcg 18742127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 50812006 - 50811938
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||||  ||||||| ||||| |||   |||||||||||  |||| ||||||||||||||||    
T  50812006 tttttacacaagaagctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttacc 50811938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 52910284 - 52910216
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||  ||||| ||||||| | || ||||||  ||||||||||  |||||||||||||||||||||    
T  52910284 tttttacctaagaggctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaactttacc 52910216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 226462 - 226572
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt--acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 298  Q
    ||||||||||||||||||||| ||||||| ||||||||  | ||||||| ||||||||||||||||||  |||||||||||  |||||||||||||||||    
T  226462 accatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaactt 226561  T
Q  299 taccaattgcg 309  Q
    ||||| |||||    
T  226562 taccagttgcg 226572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 10870031 - 10870117
Alignment:
Q  223 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  10870031 gccttaccctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 10870117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 197 - 309
Target Start/End: Original strand, 12914087 - 12914201
Alignment:
Q  197 gtcttaccatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaaca 294  Q
    |||| |||||||| ||||||||| || ||||||| ||||||| |||||||||| ||||||| |||||||||||| ||||||||||| |||||| ||||||    
T  12914087 gtctcaccatttggtgtattgtacgccgccttaccctgttttttacacaagaggctgtttccaggacttgaacttgtgacctttcggtcacattacaaca 12914186  T
Q  295 actttaccaattgcg 309  Q
    ||||||||| |||||    
T  12914187 actttaccagttgcg 12914201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 26869806 - 26869698
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| |||||||||||| |||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  26869806 accatttggtgtattgtacgcagccttaccctgtttttacaccagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttta 26869707  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  26869706 ccagttgcg 26869698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 203 - 309
Target Start/End: Original strand, 7696945 - 7697051
Alignment:
Q  203 ccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    ||||||| ||||||||| || ||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||||   ||||||||||||||||||||    
T  7696945 ccatttggtgtattgtacgcagccttaccctgtttt-acacaagagactgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttac 7697043  T
Q  302 caattgcg 309  Q
    || |||||    
T  7697044 cagttgcg 7697051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 8247780 - 8247855
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  8247780 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 8247855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 22122974 - 22123075
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||||||||||| ||||||||||| || ||||||||  |||||||||||||| ||||    
T  22122974 accatttggtgtattgtacgcagccttaccctgtttt-acacaagagactgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaattta 22123072  T
Q  301 cca 303  Q
    |||    
T  22123073 cca 22123075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 22609865 - 22609764
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||| | ||||||||| ||| ||||| |  |||||||||||||||||||    
T  22609865 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttccaagacttgaacccgttaccttacagtcacatgacaacaacttta 22609766  T
Q  301 cc 302  Q
    ||    
T  22609765 cc 22609764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 16735540 - 16735432
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||||  ||||||| ||||||| ||||||||||| |||||| || |  |||||||||||||||||||    
T  16735540 accatttggtgtattgtacgcagccttaccctgtttttctacaagaggctgtttcgaggacttgaacccgtgacgttacagtcacatgacaacaacttta 16735441  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  16735440 ccagttgcg 16735432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 26782432 - 26782356
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcgt 310  Q
    ||||||||||||||| |||||| ||||||||||  ||||||||||| ||| |||||||| |||||||||||||||||    
T  26782432 tttttacacaagagattgtttcaaggacttgaatccgtgacctttcaatcgcatgacaataactttaccaattgcgt 26782356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 46421103 - 46421203
Alignment:
Q  211 tgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| ||||||||||   |||||||||||||||||||||| ||||    
T  46421103 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttaagtcacatgacaacaactttaccagttgc 46421202  T
Q  309 g 309  Q
    |    
T  46421203 g 46421203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 309
Target Start/End: Complemental strand, 1217187 - 1217081
Alignment:
Q  203 ccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    ||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  | ||||||| ||||||||||    
T  1217187 ccatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttac 1217089  T
Q  302 caattgcg 309  Q
    || |||||    
T  1217088 cagttgcg 1217081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 5173801 - 5173876
Alignment:
Q  224 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    ||||||| ||||||||||||||||  |||||| ||||||||||| |||||||||||  ||||||||||||||||||    
T  5173801 ccttactttgtttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 5173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 13730695 - 13730770
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||||| |||||    
T  13730695 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcg 13730770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 211 - 299
Target Start/End: Original strand, 13628858 - 13628948
Alignment:
Q  211 tgtattgtatgc-gccttactctgttt-ttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    ||||||||| || ||||||| |||||| ||||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||    
T  13628858 tgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 13628948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 40272869 - 40272978
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||||  |||||| ||||||||||| | ||||||| |  ||||||||||||||||||    
T  40272869 accatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaacttt 40272968  T
Q  300 accaattgcg 309  Q
    |||| |||||    
T  40272969 accagttgcg 40272978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 39203614 - 39203515
Alignment:
Q  202 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| ||  |||||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  39203614 accatttggtgtattgtacgcaaccttaccctgtttt-acacaagaggctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaacttta 39203516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 310
Target Start/End: Original strand, 6411881 - 6411988
Alignment:
Q  204 catttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||| ||||||||| || ||||||| ||||||||||||||||| ||||||  | ||||||||| | |||||| ||  | |||||||||||||||||||    
T  6411881 catttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttacaagacttgaacccatgacctatcagttacatgacaacaactttacc 6411980  T
Q  303 aattgcgt 310  Q
    | ||||||    
T  6411981 agttgcgt 6411988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 34420735 - 34420802
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  |||| |||||||||||||||    
T  34420735 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 52926305 - 52926376
Alignment:
Q  238 tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||| ||||||| ||||||||||| ||||||||| |  |||||||||||||||||||||| |||||    
T  52926305 tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcg 52926376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 26573227 - 26573125
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||| ||| ||||||||| || ||||||| |||||||| ||||| ||| ||||||| ||||||||||| |||||||||||  |||| |||||||||||||    
T  26573227 accaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaacttt 26573128  T
Q  300 acc 302  Q
    |||    
T  26573127 acc 26573125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 303
Target Start/End: Original strand, 29366788 - 29366882
Alignment:
Q  211 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    ||||||||| || ||||||| |||||||| | ||||||| ||||||| ||||||||||| ||||||||||   ||||||||||||||||||||||    
T  29366788 tgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 29366882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 4495721 - 4495830
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||| || || |||  ||||||||||| ||||||||| |  ||||||||||||||||||    
T  4495721 accatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgaccttccagtcacatgacaacaacttt 4495820  T
Q  300 accaattgcg 309  Q
    |||| |||||    
T  4495821 accagttgcg 4495830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 298
Target Start/End: Original strand, 30928238 - 30928302
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 298  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||| |||||    
T  30928238 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaagaactt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 35417982 - 35417914
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||||| ||||||| |||| ||||||||||||||| ||  |||||||| ||||||||||||    
T  35417982 tttttacacaagaggctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttacc 35417914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 45620920 - 45620988
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||||| ||||||| || |||||||| |||||||||||  |||| ||||||||||||||||    
T  45620920 tttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaacaactttacc 45620988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 53062104 - 53062036
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||| ||||| ||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||    
T  53062104 ttttgacacaggaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 516475 - 516417
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaa 292  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||    
T  516475 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 9607269 - 9607202
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    ||||||| |||||| ||||||| |||||||||||   |||||||||  ||||||||||||||||||||    
T  9607269 tttttacgcaagaggctgtttccaggacttgaaccgatgacctttcagtcacatgacaacaactttac 9607202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 21796831 - 21796937
Alignment:
Q  201 taccatttgatgtattgtat-gcgccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    ||||||||||||| |||||  | | ||||| || ||||||||||||||||||||| ||| | ||||||  |||||| |||  |||  |||||||||||||    
T  21796831 taccatttgatgttttgtacagagtcttaccctatttttacacaagagactgtttatagtatttgaacatgtgaccattccctcatgtgacaacaacttt 21796930  T
Q  300 accaatt 306  Q
    |||||||    
T  21796931 accaatt 21796937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 33926160 - 33926094
Alignment:
Q  223 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatga 289  Q
    ||||||| ||||||||||||||||| || |||| ||||||||||| | |||||||||  ||||||||    
T  33926160 gccttaccctgtttttacacaagaggctatttccaggacttgaacccatgacctttcagtcacatga 33926094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 302
Target Start/End: Original strand, 53996627 - 53996725
Alignment:
Q  206 tttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||| ||||||||| || ||||||| ||||||| ||||||||||  |||||| | ||||||||| |||||||||||  ||| |||||||||| ||||||    
T  53996627 tttggtgtattgtaagcagccttaccctgttttttacacaagaggttgtttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttacc 53996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 297
Target Start/End: Complemental strand, 7943090 - 7942993
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaact 297  Q
    |||||||||||||||||| || | ||||| |||||||| | ||||||  ||||||| ||||||||||  ||||||||| |  ||||||||||||||||    
T  7943090 accatttgatgtattgtacgcagtcttaccctgttttttagacaagatgctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 54032616 - 54032693
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctt 277  Q
    |||||| | |||||||||||| ||||||| ||||||| ||||||||||  |||||| ||||||||||| |||||||||    
T  54032616 accattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 54032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 19731068 - 19731000
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||||| || |||| |||||||| |  ||||||||||| ||||| ||||||||| ||||||    
T  19731068 tttttacacaagaggctatttccaggacttgcatccgtgacctttcaatcacgtgacaacaaatttacc 19731000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 48667196 - 48667156
Alignment:
Q  262 ttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  48667196 ttgaactcgtgacctttccatcacatcacaacaactttacc 48667156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 25944535 - 25944468
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    ||||||||| |||| | ||||| ||||||||||| | |||||||||  |||| |||||||||||||||    
T  25944535 tttttacacgagaggcggtttccaggacttgaacccatgacctttcagtcacgtgacaacaactttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 31542457 - 31542411
Alignment:
Q  256 taggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||| ||||| |||||||||||| |||| |||||||||||||||||    
T  31542457 taggatttgaattcgtgacctttcaatcatatgacaacaactttacc 31542411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 31592947 - 31592882
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaac 267  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| |||||||||||    
T  31592947 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaac 31592882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 289
Target Start/End: Original strand, 45139539 - 45139624
Alignment:
Q  206 tttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatga 289  Q
    |||| |||||||||||| ||||||| |||| |||||||||||||  |||||| |  |||||||| |||||||||||  ||||||||    
T  45139539 tttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaacttgaacccgtgacctttcagtcacatga 45139624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 254
Target Start/End: Complemental strand, 47624141 - 47624088
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgttt 254  Q
    |||||||| ||||||||| || ||||||| ||||||||||||||||| ||||||    
T  47624141 accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 272
Target Start/End: Original strand, 10795486 - 10795554
Alignment:
Q  206 tttgatgtattgtatgc-gccttactctgt-ttttacacaagagactgtttctaggacttgaactcgtg 272  Q
    |||| ||||||||| || ||||||| |||| ||||||||||||| ||||||| ||||||||||| ||||    
T  10795486 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 19751644 - 19751576
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||||| || |||| |||||||| |  ||||||||||| ||||| |||||| || ||||||    
T  19751644 tttttacacaagaggctatttccaggacttgcatccgtgacctttcaatcacgtgacaaaaaatttacc 19751576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 19426980 - 19427055
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| |||||    
T  19426980 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttaccagttgcg 19427055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 235 - 309
Target Start/End: Original strand, 47077945 - 47078019
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| |||||    
T  47077945 ttttacacaagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcg 47078019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 40463954 - 40463853
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| |||||| || || ||||||| | ||||||||||||||||||||||||| ||||||||| ||||||||| |  |||||||||||||||||||    
T  40463954 accatttggtgtattatacgcagccttacccagtttttacacaagagactgtttctatgacttgaacccgtgaccttacagtcacatgacaacaacttta 40463855  T
Q  301 cc 302  Q
    ||    
T  40463854 cc 40463853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 21172066 - 21172173
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||||  | |||||||||||||||||    
T  21172066 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaacttta 21172164  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  21172165 ccagttgcg 21172173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 309
Target Start/End: Complemental strand, 43557541 - 43557441
Alignment:
Q  211 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||| || |||||||||||||||| ||||||||| ||||||| ||||||||||| | |||||||||  |||||||||||||||||||||| ||||    
T  43557541 tgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccagttgc 43557442  T
Q  309 g 309  Q
    |    
T  43557441 g 43557441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 27629678 - 27629603
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||| |||||    
T  27629678 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttaccagttgcg 27629603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 2541076 - 2541186
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcga-tcacatgacaacaactt 298  Q
    |||||||| ||||| ||| || ||||||| ||||||| |||||||||| ||||||| ||||||||||| ||||||||||| | |||||||||||||||||    
T  2541076 accatttggtgtatagtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttccagtcacatgacaacaactt 2541175  T
Q  299 taccaattgcg 309  Q
    ||||| |||||    
T  2541176 taccagttgcg 2541186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 33871967 - 33872069
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||  |||||||||||||||||  |||||| ||||||||||| || ||||||||  |||||||||||||||||||    
T  33871967 accatttggtgtattgtacgcagccttatcctgtttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttta 33872066  T
Q  301 cca 303  Q
    |||    
T  33872067 cca 33872069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 42495916 - 42496001
Alignment:
Q  224 ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||| ||||||||| ||||||| ||||||| ||||||||||| |||||||||||  ||| |||||||||||||||||| |||||    
T  42495916 ccttaccctgtttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcg 42496001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 42798747 - 42798638
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || |||||||  ||||||| ||||||||||||||||| | ||||||||| ||||||||| |  ||||||||||||||||||    
T  42798747 accatttggtgtattgtacgcagccttaccttgttttttacacaagagactgtttccaagacttgaacccgtgaccttccagtcacatgacaacaacttt 42798648  T
Q  300 accaattgcg 309  Q
    |||| |||||    
T  42798647 accagttgcg 42798638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 10693130 - 10693229
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| || |||| ||||||||| ||||||| ||||||||||| |||||||||||  |||||||||||||||||||    
T  10693130 accatttggtgtattgtacgcagccttaccctctttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 10693228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 32758337 - 32758230
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| |||||||||  | ||||||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  32758337 accatttggtgtattgtacacagccttaccctgtttt-acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttta 32758239  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  32758238 ccagttgcg 32758230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 34626265 - 34626373
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||| | || ||||||| ||||||||||||| ||| ||||||| ||||||||||   ||| |||||| ||||||||||||||||||||    
T  34626265 accatttggtgtattgaacgcagccttaccctgtttttacacaggaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaacttta 34626364  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  34626365 ccagttgcg 34626373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 39123937 - 39123865
Alignment:
Q  231 ctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    ||||||||||||||||||| ||||||||||||||||| |||| | ||||  ||||||||||||||||||||||    
T  39123937 ctgtttttacacaagagaccgtttctaggacttgaacccgtgtcgtttcagtcacatgacaacaactttacca 39123865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 309
Target Start/End: Complemental strand, 46354263 - 46354163
Alignment:
Q  211 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||| || ||||||| |||||||| |||||||||  |||||| ||||||||||| ||||||||| | ||||||||||||||||||||||| ||||    
T  46354263 tgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccaatcacatgacaacaactttaccagttgc 46354164  T
Q  309 g 309  Q
    |    
T  46354163 g 46354163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 18327089 - 18327003
Alignment:
Q  223 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||| ||||||||||||||||| |||||||  |||||||||| |||||||||    |||||||||||||||||||||| |||||    
T  18327089 gccttaccctgtttttacacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttaccagttgcg 18327003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 11617645 - 11617754
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || | ||||| ||||||| ||||||||||  |||||| |||||||||||  ||||||||||  ||||||||||||||||||    
T  11617645 accatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttt 11617744  T
Q  300 accaattgcg 309  Q
    |||| |||||    
T  11617745 accagttgcg 11617754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 298
Target Start/End: Original strand, 28078189 - 28078286
Alignment:
Q  202 accatttgatgtattgtatgcg-ccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactt 298  Q
    |||||||| ||||||| ||||  |||||| ||||||||  ||| ||||||||||||||||||||||| ||||||||| |  |||||||||||||||||    
T  28078189 accatttggtgtattgcatgcaaccttaccctgtttttttacacgagactgtttctaggacttgaacccgtgaccttacagtcacatgacaacaactt 28078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 42805568 - 42805499
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  42805568 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 42805499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 310
Target Start/End: Original strand, 22699061 - 22699137
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcgt 310  Q
    ||||||||||||||||| |||| ||||||||||| | | |||||||  |||||||||||||||||||||| ||||||    
T  22699061 tttttacacaagagactatttccaggacttgaacccataacctttcagtcacatgacaacaactttaccagttgcgt 22699137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 309
Target Start/End: Original strand, 35334916 - 35334980
Alignment:
Q  245 gagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||||| ||||||||||||||||||||| |  |||||||||||||||||||||| |||||    
T  35334916 gagactgtttccaggacttgaactcgtgaccttccagtcacatgacaacaactttaccagttgcg 35334980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 29907463 - 29907393
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatg--acaacaactttacc 302  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||  |||||||  ||||||||||||||    
T  29907463 tttttacacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgatacaacaactttacc 29907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 296
Target Start/End: Original strand, 42391157 - 42391251
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaac 296  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||||||  ||||||| ||||||||||| |||||||||||  |||||||||||||||    
T  42391157 accatttggtgtattgtacgcagccttaccctgtttt-acacaagaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 42476949 - 42476848
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || |||||||  |||||| ||||||||||||||||| || |||||||  ||||||||||   |||||||||||||||||||    
T  42476949 accatttggtgtattgtacgcagccttaccttgtttt-acacaagagactgtttccagaacttgaatccgtgaccttttagtcacatgacaacaacttta 42476851  T
Q  301 cca 303  Q
    |||    
T  42476850 cca 42476848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 236 - 301
Target Start/End: Complemental strand, 7193127 - 7193062
Alignment:
Q  236 tttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    ||||||||||||  |||||| ||||||||||| |||||||||||  ||||||||||||||||||||    
T  7193127 tttacacaagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaactttac 7193062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 302
Target Start/End: Complemental strand, 19265892 - 19265791
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||||||| || |||||||||||| | |||| || | ||||||||| |||||||||||  |||| ||||||||||||||    
T  19265892 accatttggtgtattgtacgcagccttaccctctttttacacaagcggctgtatccaagacttgaacccgtgacctttcagtcacgtgacaacaacttta 19265793  T
Q  301 cc 302  Q
    ||    
T  19265792 cc 19265791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 48735179 - 48735287
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttcta-ggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || |||||||  |||||| |||||||||  |||||| | |||||||||| |||||||||||  ||||||||||||||||||    
T  48735179 accatttggtgtattgtacgcagccttaccgtgtttt-acacaagaggttgtttccaaggacttgaacccgtgacctttcagtcacatgacaacaacttt 48735277  T
Q  300 accaattgcg 309  Q
    |||| |||||    
T  48735278 accagttgcg 48735287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 3469270 - 3469338
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||||||||| ||||||||||||||||    ||||||||||  |||||||||||||||||||||    
T  3469270 tttttacacaagagaatgtttctaggacttgagtctgtgacctttcagtcacatgacaacaactttacc 3469338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 6736967 - 6736867
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| |||||||||||| | |||||  |||||||| |||||||  |||||  ||||||||||| |||||||||||  || ||||||||||||||||    
T  6736967 accatttggtgtattgtatgcagtcttaccttgtttttatacaagaggttgttttgaggacttgaacccgtgacctttcagtcgcatgacaacaacttta 6736868  T
Q  301 c 301  Q
    |    
T  6736867 c 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 16341322 - 16341254
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||| |  |||||| ||||||||||||    
T  16341322 tttttacacaagaggctgtttctagaacttgaacccgtgacctttcaaatacatgataacaactttacc 16341254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 28362236 - 28362304
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||||| | |||||||||||||||||  ||||||||||   ||||||||||||||||||||    
T  28362236 tttttacacaagaggcagtttctaggacttgaacctgtgacctttcagccacatgacaacaactttacc 28362304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 7794597 - 7794672
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    |||||||| ||||| ||||||| ||||||||||| ||||||||| |  |||||| ||||||||||||||| |||||    
T  7794597 tttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttaccagttgcg 7794672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 310
Target Start/End: Original strand, 5180238 - 5180324
Alignment:
Q  225 cttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcgt 310  Q
    ||||| |||||||| ||||||||| ||||||| || | |||||| | |||||||||  |||||||||||||||||||||| ||||||    
T  5180238 cttaccctgtttttgacacaagaggctgtttccagaagttgaacccttgacctttcagtcacatgacaacaactttaccagttgcgt 5180324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 15108457 - 15108527
Alignment:
Q  205 atttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgac 274  Q
    |||||||||||||||  | |||||||  ||||||||||||||| |||||||| ||||||||||||||||||    
T  15108457 atttgatgtattgtacacagccttaccttgtttttacacaagaaactgtttccaggacttgaactcgtgac 15108527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 31591166 - 31591243
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 279  Q
    |||||||  ||||||||| || ||||||||||||||| |||||||||  |||||| |||||||||||||||||||||||    
T  31591166 accatttattgtattgtacgcagccttactctgtttt-acacaagaggttgtttccaggacttgaactcgtgacctttc 31591243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 299
Target Start/End: Complemental strand, 47716528 - 47716438
Alignment:
Q  211 tgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    ||||||||| || ||||||| |||||||| ||||||||| ||||||| ||||||||||| ||||||||| |  ||||||| ||||||||||    
T  47716528 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttt 47716438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 48123541 - 48123643
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtt-tttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| |||||||||||| |  |||| ||||| |||||||||||| ||||||| ||||||||||| | |||||||||   ||||||| |||||||||    
T  48123541 accatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttcagacacatgataacaacttt 48123640  T
Q  300 acc 302  Q
    |||    
T  48123641 acc 48123643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 7645000 - 7644931
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||  |||| | ||||||| |||||||    
T  7645000 tttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgttacaacaaatttacca 7644931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 13805145 - 13805077
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||||||| |||| || |||| ||||||||||| ||| |||||||  ||||||||||||||||||||||    
T  13805145 ttttacaccagaggctatttccaggacttgaacccgttacctttcagtcacatgacaacaactttacca 13805077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 1424001 - 1424076
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||||| |||||||||| |||| |||||  ||||||||| |  |||||| ||||||||||||||| |||||    
T  1424001 tttttacacaacagactgtttccaggatttgaatccgtgaccttccagtcacataacaacaactttaccagttgcg 1424076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 22065654 - 22065563
Alignment:
Q  213 tattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    |||||||||| || |||| || ||||||||||||||  |||||| |  |||||||||| |||| |||| ||||| |||||||||||||||||    
T  22065654 tattgtatgcagctttaccctatttttacacaagaggttgtttccaaaacttgaactcatgacttttcaatcacgtgacaacaactttacca 22065563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 277
Target Start/End: Original strand, 38262287 - 38262330
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctt 277  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  38262287 tttttacacaagagactgtttccaggacttgaacccgtgacctt 38262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 23419731 - 23419833
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttt-tacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || | ||||| ||||||| |||||||||| ||||||| || ||||||||  |||||||||   |||||||||| |||||||    
T  23419731 accatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccagaacttgaacctgtgaccttttagtcacatgacagcaacttt 23419830  T
Q  300 acc 302  Q
    |||    
T  23419831 acc 23419833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 35203483 - 35203433
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatca 284  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||| ||||    
T  35203483 tttttacacaagagaatgtttccaggacttgaacccgtgacctttcaatca 35203433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 302
Target Start/End: Original strand, 44123710 - 44123780
Alignment:
Q  232 tgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||||||||||| ||||||| || |||||||| ||| | |||||  |||||||||| ||||||||||    
T  44123710 tgtttttacacaagaggctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttacc 44123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 7879716 - 7879639
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctt 277  Q
    |||||||| ||||||||| || |||||||  ||||||| |||||||||| |||||| ||||||||||| |||||||||    
T  7879716 accatttggtgtattgtacgcagccttaccttgttttttacacaagagattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 14099097 - 14099165
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||||| || || |||| ||||||| ||| | |||||||||  |||||||||||||||||||||    
T  14099097 tttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacatgacaacaactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 14409114 - 14409182
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    ||||||||||| || || |||| ||||||| ||| | |||||||||  |||||||||||||||||||||    
T  14409114 tttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacatgacaacaactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 309
Target Start/End: Original strand, 14732928 - 14732988
Alignment:
Q  249 ctgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||| ||||||||||| | |||| ||||  |||||||||||||||||||||| |||||    
T  14732928 ctgtttccaggacttgaacccatgacttttcagtcacatgacaacaactttaccagttgcg 14732988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 32233214 - 32233270
Alignment:
Q  223 gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 279  Q
    ||||||| |||||||||||||||||  |||||| ||||||||||| | |||||||||    
T  32233214 gccttaccctgtttttacacaagaggttgtttccaggacttgaacccatgacctttc 32233270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 38604609 - 38604550
Alignment:
Q  197 gtcttaccatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttc 255  Q
    |||| |||||||| ||||||||| || ||||||| ||||||||||||||||| |||||||    
T  38604609 gtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttc 38604550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 299
Target Start/End: Complemental strand, 11741871 - 11741774
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||||||||| || ||||||| || |||| |||| |||  ||||||  ||||||||||| | |||||||||  ||||||||||||||||||    
T  11741871 accatttggtgtattgtacgcagccttaccctatttt-acactagaagctgttttcaggacttgaacccatgacctttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 279
Target Start/End: Original strand, 18512510 - 18512588
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttc 279  Q
    |||||| | ||||||||| || ||||||| || |||||||||||||   |||||| ||||||||||| |||||||||||    
T  18512510 accattcggtgtattgtacgcagccttaccctatttttacacaagatgttgtttccaggacttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 8491963 - 8491918
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttc 279  Q
    |||||| |||||||||||||| || |||||||||| ||||||||||    
T  8491963 tttttaaacaagagactgtttttaagacttgaacttgtgacctttc 8491918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 8518772 - 8518727
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttc 279  Q
    |||||| |||||||||||||| || |||||||||| ||||||||||    
T  8518772 tttttaaacaagagactgtttttaagacttgaacttgtgacctttc 8518727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 302
Target Start/End: Complemental strand, 12473359 - 12473280
Alignment:
Q  224 ccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttc-gatcacatgacaacaactttacc 302  Q
    |||||| |||||||| |||||||||  |||||  ||||||||||| | ||||||||| ||| |||||||||||||||||||    
T  12473359 ccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttcagat-acatgacaacaactttacc 12473280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 42101976 - 42102044
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||||  ||||| ||||||| ||||||||||||  ||||||| |  |||| ||||||||||||||||    
T  42101976 tttttacggaagaggctgtttccaggacttgaacttttgaccttccagtcacgtgacaacaactttacc 42102044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 310
Target Start/End: Original strand, 10110 - 10215
Alignment:
Q  205 atttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    ||||| ||||||||| || | ||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  10110 atttggtgtattgtacgcagtcttactctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 10208  T
Q  304 attgcgt 310  Q
     ||||||    
T  10209 gttgcgt 10215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 310
Target Start/End: Original strand, 20438 - 20543
Alignment:
Q  205 atttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    ||||| ||||||||| || | ||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  20438 atttggtgtattgtacgcagtcttactctgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 20536  T
Q  304 attgcgt 310  Q
     ||||||    
T  20537 gttgcgt 20543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 30655 - 30548
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || ||| ||| ||||||| ||||||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  30655 accatttggtgtattgtacgcagccctaccctgtttt-acacaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaacttta 30557  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  30556 ccagttgcg 30548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 310
Target Start/End: Original strand, 1646 - 1752
Alignment:
Q  204 catttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacc 302  Q
    |||||| |||||||||||| ||||||  ||||||| |||||||||  |||||  ||||||||||| | |||||||||  |||||||||||||||||||||    
T  1646 catttggtgtattgtatgcagccttatcctgtttt-acacaagaggttgttttcaggacttgaacccatgacctttcagtcacatgacaacaactttacc 1744  T
Q  303 aattgcgt 310  Q
    ||||||||    
T  1745 aattgcgt 1752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 13081 - 13182
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||| | ||||||||| || |||||||  ||||||||| |||||| ||||||| |||||||||||  ||||||||||  |||||||||||||||||||    
T  13081 accattcggtgtattgtacgcagccttaccttgtttttacgcaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaacttta 13180  T
Q  301 cc 302  Q
    ||    
T  13181 cc 13182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 11207 - 11101
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttta 300  Q
    |||||||| ||||||||| || |||||||| |||||| ||||||||| ||||||| ||||||||||| |||||||||||  |||||| | ||||||||||    
T  11207 accatttggtgtattgtaagcagccttactttgtttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat-agaacaacttta 11110  T
Q  301 ccaattgcg 309  Q
    ||| |||||    
T  11109 ccagttgcg 11101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 46875 - 46800
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgcg 309  Q
    ||||||||||||||  |||||| || |||||||| |||||||||    ||||||||||||||||||||||||||||    
T  46875 tttttacacaagaggttgtttccagcacttgaacccgtgaccttctagtcacatgacaacaactttaccaattgcg 46800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 309
Target Start/End: Original strand, 24829 - 24933
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgttttt-acacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaacttt 299  Q
    |||||||| ||| ||||| || ||||||| |||||||| ||||||||| |||||     ||||||||| | |||||||||  ||||||||||||||||||    
T  24829 accatttggtgtgttgtacgcagccttaccctgttttttacacaagaggctgtt-----gacttgaacccatgacctttcagtcacatgacaacaacttt 24923  T
Q  300 accaattgcg 309  Q
    |||| |||||    
T  24924 accagttgcg 24933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 46997 - 47041
Alignment:
Q  257 aggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    |||||||||||||||||||||||  |||| |||||||||||||||    
T  46997 aggacttgaactcgtgacctttcagtcacctgacaacaactttac 47041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 301
Target Start/End: Complemental strand, 4200 - 4134
Alignment:
Q  235 ttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    |||||||||||||  |||||| ||||||||||| |||||||||||  |||||| |||||||||||||    
T  4200 ttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 4134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 59021 - 58947
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    |||||| ||||||| ||||||| ||||||||||| |||||||||||  ||||||||||| || ||||||| ||||    
T  59021 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttaccagttgc 58947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 308
Target Start/End: Original strand, 35074 - 35184
Alignment:
Q  202 accatttgatgtattgtatgc-gccttactctgtttttacac--aagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaa-caact 297  Q
    |||||||| ||||||||| || ||||||| ||||||| ||||  ||||||||||||  ||||||||||| ||||||||| |  |||||||||||  ||||    
T  35074 accatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgaccttacagtcacatgacaataaact 35173  T
Q  298 ttaccaattgc 308  Q
    |||||| ||||    
T  35174 ttaccagttgc 35184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 309
Target Start/End: Original strand, 72923 - 73027
Alignment:
Q  201 taccatttgatgtattgtatgc-gccttactctgttttt-acacaagagact-gtttctaggacttgaactcgtgacctttcgatcacatgacaacaact 297  Q
    ||||||||| ||||||||| || |||||||  ||||||| |||||||||||| ||||||||||||||||| ||||||        |||||||||||||||    
T  72923 taccatttggtgtattgtaggcagccttaccgtgttttttacacaagagacttgtttctaggacttgaacccgtgac-------acacatgacaacaact 73015  T
Q  298 ttaccaattgcg 309  Q
    |||||| |||||    
T  73016 ttaccagttgcg 73027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 8938 - 8866
Alignment:
Q  231 ctgtttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttacca 303  Q
    ||||||||||||||||   |||||| |||| ||||||  |||||||| |  ||||||||||||||||||||||    
T  8938 ctgtttttacacaagaagttgtttccaggaattgaacctgtgaccttacagtcacatgacaacaactttacca 8866  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 83903 - 83852
Alignment:
Q  250 tgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttac 301  Q
    |||||| | ||||||||| |||||||||||  ||||||||||||||||||||    
T  83903 tgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttac 83852  T

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Target: scaffold0311 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 10854 - 10780
Alignment:
Q  234 tttttacacaagagactgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattgc 308  Q
    ||||||||||||||  |||||  ||  ||||||| ||||||||| |  |||||||||||||||||||||| ||||    
T  10854 tttttacacaagaggttgttttcagaccttgaacccgtgaccttccagtcacatgacaacaactttaccagttgc 10780  T

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Target: scaffold0194 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 307
Target Start/End: Complemental strand, 24693 - 24635
Alignment:
Q  249 ctgtttctaggacttgaactcgtgacctttcgatcacatgacaacaactttaccaattg 307  Q
    ||||||| ||||||||||| ||||||||| |  |||| |||||||||||||| ||||||    
T  24693 ctgtttccaggacttgaacccgtgaccttacagtcacttgacaacaactttatcaattg 24635  T

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