View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11523_high_20 (Length: 363)
Name: NF11523_high_20
Description: NF11523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11523_high_20 |
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Alignment Details
Target: chr6 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 18 - 351
Target Start/End: Original strand, 10660782 - 10661115
Alignment:
| Q |
18 |
aaatcatttgcacatgaagcagagttcacaaaatatattgatttacattttcacaaactcatgattaaatccatccacaaatcatgcttcctcaacaaaa |
117 |
Q |
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| T |
10660782 |
aaatcatttgcacatgaagcagacttcacaaaatatattgatttacattttcacaaactcatgattaaatccatccacaaatcatgcttcctcaacaaaa |
10660881 |
T |
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| Q |
118 |
ttaccctccattcttcaaagaaattcctttatcttcagctgcaagaatgtacttaattggcattgaagctgtacattgaactggttagcaacaatatcta |
217 |
Q |
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| T |
10660882 |
ttaccctccattcttcaaagaaattcctttatcttcagctgcaagaatgtacttaattggcattgaagctgtacattgaactggttagcaacaatatcta |
10660981 |
T |
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| Q |
218 |
caaatttaattgctaccgatgtgccgcttctcgaaagaaaaatcttttgaacttgaagttgtgccgatttcatgtctaacgctaaccggcaattcagttg |
317 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10660982 |
caaatttaattgctaccgatgtgtcgcttctcgaaagaaaaatcttttgaacttgaagttgtgccgatttcatgtctaacgctaaccggcaattcagttg |
10661081 |
T |
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| Q |
318 |
tcgaaaatgactcgacaattggtatctcaatctc |
351 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
10661082 |
tcgaaaatgactcgacaattggtatctcaatctc |
10661115 |
T |
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