View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11525_low_12 (Length: 404)
Name: NF11525_low_12
Description: NF11525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11525_low_12 |
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Alignment Details
Target: chr3 (Bit Score: 345; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 15 - 387
Target Start/End: Original strand, 32133702 - 32134074
Alignment:
| Q |
15 |
ataggttttccatgtgatataagacactcatgaacttgttatctgagtttttctttctgcatctgctagtggatcaagctaaggaatacgggaattgcaa |
114 |
Q |
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| T |
32133702 |
ataggttttccatgtgatataagacactcatgaacttgttatctgagtttttctttctgcatctgcttgtggatcaagctaaggaatacgggaattgcaa |
32133801 |
T |
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| Q |
115 |
aaaataaattgccctgaagaccagctcagcagtaggattacaatcaaactatttttatgattttacaataattgtctttcttaatagacaatgtttctaa |
214 |
Q |
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||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
32133802 |
aaaataaattgccctgaagaccaaatcagcagtaggattataatcaaactatttttatgatttttcaataattgtctttcttaatagacaatgtttctaa |
32133901 |
T |
|
| Q |
215 |
atataagaattaccattcatagcaatcttcatcctaccataaagccttcaaaatattgcaacattttaagactaacagtgtgtgtgtaaaattaaataat |
314 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
32133902 |
ctataagaattaccattcatagcaatcttcatcctaccataaagccttcaaaatattgcaacattttaagactaacagtgtgtgtgtaaaattaaaaaat |
32134001 |
T |
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| Q |
315 |
acaccaaaatcagtacaccgagtattgtagaccttttcttgatccctatacaccaattcccaatagtttaaaa |
387 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32134002 |
acaccaaaatcagtacaccgagtattgtagaccttttcttgatccctatacaccaattcccaatagtttaaaa |
32134074 |
T |
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