View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11525_low_9 (Length: 456)
Name: NF11525_low_9
Description: NF11525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11525_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 413; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 16 - 440
Target Start/End: Complemental strand, 45675778 - 45675354
Alignment:
| Q |
16 |
gcaaaaaggaattgatccaaacacacaccaaccattctctgagaacaatgacaatgacacaccaaatattcagattcaaaaaacctctgtgggatccaat |
115 |
Q |
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| T |
45675778 |
gcaaaaaggaattgatccaaacacacaccaaccattctctgagaacaatgacaatgacacaccaaatattcagattcaaaaaacctctgtgggatccaat |
45675679 |
T |
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| Q |
116 |
gaagtgaagaatctatttgatgatacaccaaatccaaattctattccaatggataattgtaattatccccttgaaattaattcaaaaatcaacaactcag |
215 |
Q |
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| T |
45675678 |
gaagtgaagaatctatttgatgatacaccaaatccaaattctattccaatggataattgtaattatccccttgaaattaattcaaaaatcaacaactcgg |
45675579 |
T |
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| Q |
216 |
ttaattgcttcacaccttgtgataatatggttggattaggaggaggatcatatctcaattttcaacaacttaactatggaatcaataacatgactctatc |
315 |
Q |
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| T |
45675578 |
ttaattgcttcataccttgtgataatatggttggattaggaggaggatcatatctcaattttcaacaacttaactatggaatcaataacatgactctatc |
45675479 |
T |
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| Q |
316 |
tcctccaaattccaacagcaacaattcactttgcttcataccaagtactagtggttccacttctacttgctctcaaatgatgtcagaattaaattcttcc |
415 |
Q |
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| T |
45675478 |
tcctccaaattccaacagcaacacttcactttgcttcataccaagtactagtggttccacttctacttgctctcaaatgatgtcagaattaaattcttcc |
45675379 |
T |
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| Q |
416 |
accatgttccattctatgtacacaa |
440 |
Q |
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| T |
45675378 |
accatgttccattctatgtacacaa |
45675354 |
T |
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