View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11527_high_42 (Length: 207)
Name: NF11527_high_42
Description: NF11527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11527_high_42 |
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Alignment Details
Target: chr1 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 50126860 - 50127034
Alignment:
| Q |
19 |
tccttttatagtgcagggatttaattgtctcagaaatggtagaccagatcaagattatctcaaatatagatggaaaccttttgcctgtgatcttccaagg |
118 |
Q |
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| T |
50126860 |
tccttttatagtgcagggatttaattgtctcagaaatgggagaccagatcaagattatctcaaatatagatggaaaccttttgcctgtgatcttccaagg |
50126959 |
T |
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| Q |
119 |
taattatatatttatttagacaaaaaacttgttataacctaaacttttaatatattgtccttgttgttttcttct |
193 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||| |
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| T |
50126960 |
taattatatatttatttagacaaaaaacttgttataacctagacttttaatatactgtcctagttgttttcttct |
50127034 |
T |
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