View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11527_low_2 (Length: 803)

Name: NF11527_low_2
Description: NF11527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11527_low_2
NF11527_low_2
[»] chr3 (3 HSPs)
chr3 (640-786)||(42107348-42107494)
chr3 (222-366)||(52343835-52343979)
chr3 (217-374)||(32516526-32516685)
[»] chr8 (3 HSPs)
chr8 (217-369)||(12677470-12677622)
chr8 (217-369)||(33060978-33061127)
chr8 (291-375)||(25721384-25721468)
[»] chr4 (5 HSPs)
chr4 (226-369)||(32324699-32324842)
chr4 (292-369)||(9369667-9369742)
chr4 (294-369)||(10573384-10573457)
chr4 (286-369)||(6510359-6510442)
chr4 (275-369)||(38714064-38714156)
[»] chr7 (4 HSPs)
chr7 (221-369)||(33999805-33999953)
chr7 (243-369)||(13412989-13413115)
chr7 (259-367)||(15954471-15954579)
chr7 (221-369)||(39709148-39709300)
[»] chr1 (3 HSPs)
chr1 (227-369)||(750070-750212)
chr1 (295-369)||(43411516-43411590)
chr1 (292-369)||(16587803-16587878)
[»] chr2 (2 HSPs)
chr2 (217-346)||(33412656-33412785)
chr2 (227-369)||(16255764-16255906)
[»] chr5 (3 HSPs)
chr5 (227-369)||(36419142-36419284)
chr5 (217-324)||(26103045-26103152)
chr5 (305-374)||(28569654-28569723)
[»] chr6 (3 HSPs)
chr6 (275-367)||(13094725-13094817)
chr6 (285-369)||(2820682-2820764)
chr6 (285-369)||(12691749-12691831)


Alignment Details
Target: chr3 (Bit Score: 131; Significance: 2e-67; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 640 - 786
Target Start/End: Original strand, 42107348 - 42107494
Alignment:
Q  640 tttgtgcactcctcatcttatcatacaatgcagcacattatctgacctcctgcaccatctcaataaacattgatacggcagcaagtgcacgagtatatcg 739  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  42107348 tttgtgcactcctcatcttatcatacaatgcagcacattattcgacctcctgcaccatctcaatagacattgatacggcagcaagtgcacgagtatatca 42107447  T
Q  740 tcgtaataaaaaagtattaatcctcatgaatttgtgattatcaatgt 786  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42107448 tcgtaataaaaaagtattaatcctcatgaatttgtgattatcaatgt 42107494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 222 - 366
Target Start/End: Complemental strand, 52343979 - 52343835
Alignment:
Q  222 tgtaattttctgtaacttttttatggtgctcttttaaaatagcaccctactgatgtatcttggttggtcggtttaccttttgtatgtcttgtgcacggta 321  Q
    |||| |||| |||||||||||||||||||| || |||||||||||||||||| ||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  52343979 tgtagttttttgtaacttttttatggtgctattctaaaatagcaccctactgttgtattttggttggtaggtttaccttttgcatgtcttgtgcacggta 52343880  T
Q  322 aatcgtcattgttcataatatatatctcattttagtttgttcaaa 366  Q
    ||||  ||||||||||||||||| |||||||||||||||||||||    
T  52343879 aatcaccattgttcataatatatgtctcattttagtttgttcaaa 52343835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 217 - 374
Target Start/End: Complemental strand, 32516685 - 32516526
Alignment:
Q  217 tattgtgtaattttctgtaacttttttatggtgctcttttaaaatagcaccctactgatgtatcttggttggtcggtttaccttttgtatgtcttgtgca 316  Q
    ||||||||||| | || |||||| || ||||||||| |||| || | |||||||||  ||||| ||||  ||| ||||||||||||| ||||||| ||||    
T  32516685 tattgtgtaatgtgctctaacttcttgatggtgctcctttagaacaacaccctactcttgtattttggcaggttggtttaccttttgcatgtcttatgca 32516586  T
Q  317 cggtaaatcgtcattgttcata--atatatatctcattttagtttgttcaaaaaagaata 374  Q
    ||  ||||   | ||||| |||  ||||||||||||||||||||| || |||||| ||||    
T  32516585 cgacaaattaaccttgtttataatatatatatctcattttagtttcttaaaaaaataata 32516526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 3e-59; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 217 - 369
Target Start/End: Complemental strand, 12677622 - 12677470
Alignment:
Q  217 tattgtgtaattttctgtaacttttttatggtgctcttttaaaatagcaccctactgatgtatcttggttggtcggtttaccttttgtatgtcttgtgca 316  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||  ||||||||||||  ||||||||||||||| ||||||||||||    
T  12677622 tattgtgtaattttctgtaacttttttatggtgctcttctaaaatagcaccttactactgtatcttggttaatcggtttaccttttgcatgtcttgtgca 12677523  T
Q  317 cggtaaatcgtcattgttcataatatatatctcattttagtttgttcaaaaaa 369  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  12677522 cggtaaatcgccattgttcataatatatatctcattttagtttgttaaaaaaa 12677470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 217 - 369
Target Start/End: Original strand, 33060978 - 33061127
Alignment:
Q  217 tattgtgtaattttctgtaacttttttatggtgctcttttaaaatagcaccctactgatgtatcttggttggtcggtttaccttttgtatgtcttgtgca 316  Q
    ||||||||| |||||||||| |||||   |||||| || |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  33060978 tattgtgtagttttctgtaatttttt---ggtgctattctaaaatagcaccctacagttgtatcttggttggtcggtttaccttttgcatgtcttgtgca 33061074  T
Q  317 cggtaaatcgtcattgttcataatatatatctcattttagtttgttcaaaaaa 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33061075 cggtaaatcgtcattgttcataatatatatctcattttagtttgttcaaaaaa 33061127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 291 - 375
Target Start/End: Original strand, 25721384 - 25721468
Alignment:
Q  291 ggtttaccttttgtatgtcttgtgcacggtaaatcgtcattgttcataatatatatctcattttagtttgttcaaaaaagaatat 375  Q
    ||||| ||||||| ||||||||||||||||||||   | ||||| |||||||| ||||||||||||||||||| ||||| |||||    
T  25721384 ggtttgccttttgcatgtcttgtgcacggtaaattaaccttgtttataatataaatctcattttagtttgttccaaaaaaaatat 25721468  T

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Target: chr4 (Bit Score: 116; Significance: 1e-58; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 226 - 369
Target Start/End: Original strand, 32324699 - 32324842
Alignment:
Q  226 attttctgtaacttttttatggtgctcttttaaaatagcaccctactgatgtatcttggttggtcggtttaccttttgtatgtcttgtgcacggtaaatc 325  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  32324699 attttctgtaacttttttatggtgctattctaaaatagcaccctactgttgtatcttagttggtcggtttaccttttgcatgtcttgtgcacggtaaatc 32324798  T
Q  326 gtcattgttcataatatatatctcattttagtttgttcaaaaaa 369  Q
    || |||||||||||||||||||||||||||||||||| ||||||    
T  32324799 gttattgttcataatatatatctcattttagtttgttaaaaaaa 32324842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 292 - 369
Target Start/End: Complemental strand, 9369742 - 9369667
Alignment:
Q  292 gtttaccttttgtatgtcttgtgcacggtaaatcgtcattgttcataatatatatctcattttagtttgttcaaaaaa 369  Q
    ||||| |||||| |||||||||||||||||||||  | || || ||||||||||  ||||||||||||||||||||||    
T  9369742 gtttatcttttgcatgtcttgtgcacggtaaatcaaccttatttataatatata--tcattttagtttgttcaaaaaa 9369667  T

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Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 294 - 369
Target Start/End: Complemental strand, 10573457 - 10573384
Alignment:
Q  294 ttaccttttgtatgtcttgtgcacggtaaatcgtcattgttcataatatatatctcattttagtttgttcaaaaaa 369  Q
    |||||||||| | ||||| |||||||||||||| | ||||| |||| |||||  ||||||||||||||| ||||||    
T  10573457 ttaccttttgcaagtcttatgcacggtaaatcgaccttgtttataaaatata--tcattttagtttgttaaaaaaa 10573384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 369
Target Start/End: Complemental strand, 6510442 - 6510359
Alignment:
Q  286 tggtcggtttaccttttgtatgtcttgtgcacggtaaatcgtcattgttcataatatatatctcattttagtttgttcaaaaaa 369  Q
    |||| ||||||||||||| ||||||||||||||||||||   | |  || |||| ||||||   ||||||||||||||||||||    
T  6510442 tggttggtttaccttttgcatgtcttgtgcacggtaaattaacctcttttataaaatatatactattttagtttgttcaaaaaa 6510359  T

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Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 275 - 369
Target Start/End: Complemental strand, 38714156 - 38714064
Alignment:
Q  275 tgtatcttggttggtcggtttaccttttgtatgtcttgtgcacggtaaatcgtcattgttcataatatatatctcattttagtttgttcaaaaaa 369  Q
    ||||| ||||| ||| ||||||| ||||| |||||||||||| |||||||   | ||||  |||  |||||||||||||||||||||| ||||||    
T  38714156 tgtatgttggtaggttggtttactttttgcatgtcttgtgcatggtaaattaactttgtctata--atatatctcattttagtttgtttaaaaaa 38714064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 2e-54; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 221 - 369
Target Start/End: Original strand, 33999805 - 33999953
Alignment:
Q  221 gtgtaattttctgtaacttttttatggtgctcttttaaaatagcaccctactgatgtatcttggttggtcggtttaccttttgtatgtcttgtgcacggt 320  Q
    |||||||||||| |||||||||||||||| || |||||||||||||  ||||| ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  33999805 gtgtaattttctataacttttttatggtgttcatttaaaatagcactttactgttgtatcttggttggttggtttaccttttgcatgtcttgtgcacggt 33999904  T
Q  321 aaatcgtcattgttcataatatatatctcattttagtttgttcaaaaaa 369  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  33999905 aaatcgtccttgttcataatatacatctcattttagtttgttcaaaaaa 33999953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 243 - 369
Target Start/End: Original strand, 13412989 - 13413115
Alignment:
Q  243 tatggtgctcttttaaaatagcaccctactgatgtatcttggttggtcggtttaccttttgtatgtcttgtgcacggtaaatcgtcattgttcataatat 342  Q
    |||||||||||| ||||||| |||||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  13412989 tatggtgctcttctaaaatatcaccctactcctgtatcttgattggtcggtttaccttttgcatgtcttgtgcacggtaaatcgccatagttcataatat 13413088  T
Q  343 atatctcattttagtttgttcaaaaaa 369  Q
    ||||||||||||| |||||||||||||    
T  13413089 atatctcattttaatttgttcaaaaaa 13413115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 259 - 367
Target Start/End: Original strand, 15954471 - 15954579
Alignment:
Q  259 aatagcaccctactgatgtatcttggttggtcggtttaccttttgtatgtcttgtgcacggtaaatcgtcattgttcataatatatatctcattttagtt 358  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| ||||||||| |||||||||||||    
T  15954471 aatagcaccctactgttgtattttggttggtcggtttaccttttgcatgtcttgtccacggtaaatcgccattgtttataatatatgtctcattttagtt 15954570  T
Q  359 tgttcaaaa 367  Q
    |||||||||    
T  15954571 tgttcaaaa 15954579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 221 - 369
Target Start/End: Complemental strand, 39709300 - 39709148
Alignment:
Q  221 gtgtaattttctgtaacttttttatggtgctcttttaaaatagcaccctactgatgtatcttggttggtcggttta-ccttttgtatgtcttgtgcacgg 319  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||  |||| |||||| |||||||| |||||| ||||||| || |||| |||||||    
T  39709300 gtgtaattttctataacttttttacggtgctcatttaaaatagcacctgactgttgtatcctggttggttggtttacccttttgcatatcttttgcacgg 39709201  T
Q  320 taaatcgtcattgttc---ataatatatatctcattttagtttgttcaaaaaa 369  Q
    |||||| || ||||||   |||||||| |||||||||||||||||| ||||||    
T  39709200 taaatcttctttgttcataataatatacatctcattttagtttgtttaaaaaa 39709148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 8e-51; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 227 - 369
Target Start/End: Complemental strand, 750212 - 750070
Alignment:
Q  227 ttttctgtaacttttttatggtgctcttttaaaatagcaccctactgatgtatcttggttggtcggtttaccttttgtatgtcttgtgcacggtaaatcg 326  Q
    |||||| |||||||||||||||||||||||||||||||||| || || ||||||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  750212 ttttctataacttttttatggtgctcttttaaaatagcaccttattgttgtatcttggttggttggtttaccttttgcatgtcttgtgcatggtaaatcg 750113  T
Q  327 tcattgttcataatatatatctcattttagtttgttcaaaaaa 369  Q
     ||||||||||||||||||| ||||||||||||||| ||||||    
T  750112 ccattgttcataatatatatatcattttagtttgttaaaaaaa 750070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 295 - 369
Target Start/End: Complemental strand, 43411590 - 43411516
Alignment:
Q  295 taccttttgtatgtcttgtgcacggtaaatcgtcattgttcataatatatatctcattttagtttgttcaaaaaa 369  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43411590 taccttttgcatatcttgtgtacggtaaatcgtcattgttcataatatatatctcattttagtttgttaaaaaaa 43411516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 292 - 369
Target Start/End: Original strand, 16587803 - 16587878
Alignment:
Q  292 gtttaccttttgtatgtcttgtgcacggtaaatcgtcattgttcataatatatatctcattttagtttgttcaaaaaa 369  Q
    |||| ||||||| |||||||||||| ||||||||    ||||| |||  ||||||||||||||| |||||||||||||    
T  16587803 gttttccttttgcatgtcttgtgcagggtaaatcaattttgtttata--atatatctcattttattttgttcaaaaaa 16587878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 3e-50; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 217 - 346
Target Start/End: Original strand, 33412656 - 33412785
Alignment:
Q  217 tattgtgtaattttctgtaacttttttatggtgctcttttaaaatagcaccctactgatgtatcttggttggtcggtttaccttttgtatgtcttgtgca 316  Q
    |||||||||||||| |||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  33412656 tattgtgtaattttatgtaacttttttatggtgctattcaaaaatagcaccctactgttgtatcttggttggtcggtttaccttttgcatgtcttgtgca 33412755  T
Q  317 cggtaaatcgtcattgttcataatatatat 346  Q
    |||||||||| |||||||||||||||||||    
T  33412756 cggtaaatcgccattgttcataatatatat 33412785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 227 - 369
Target Start/End: Original strand, 16255764 - 16255906
Alignment:
Q  227 ttttctgtaacttttttatggtgctcttttaaaatagcaccctactgatgtatcttggttggtcggtttaccttttgtatgtcttgtgcacggtaaatcg 326  Q
    |||| |||||||||||||||||| |  | ||||||||||||||| || ||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  16255764 ttttttgtaacttttttatggtgttactctaaaatagcaccctattgttgtatattggttggtcggtttaccttttgcatgtcttgtgcacggtaaatcg 16255863  T
Q  327 tcattgttcataatatatatctcattttagtttgttcaaaaaa 369  Q
     ||||||| ||||||||| ||||||||||||||||||||||||    
T  16255864 ccattgtttataatatatgtctcattttagtttgttcaaaaaa 16255906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 7e-39; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 227 - 369
Target Start/End: Complemental strand, 36419284 - 36419142
Alignment:
Q  227 ttttctgtaacttttttatggtgctcttttaaaatagcaccctactgatgtatcttggttggtcggtttaccttttgtatgtcttgtgcacggtaaatcg 326  Q
    |||| ||||||||||||| |||| |  | |||| ||||||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||||||||||||    
T  36419284 ttttttgtaacttttttacggtgttactctaaattagcaccctactgttgtattttgattggtcggtttaccttttgcatgtcttgtgcacggtaaatcg 36419185  T
Q  327 tcattgttcataatatatatctcattttagtttgttcaaaaaa 369  Q
     ||||||| ||||||||| |||||||||| |||||||||||||    
T  36419184 ccattgtttataatatatgtctcattttactttgttcaaaaaa 36419142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 217 - 324
Target Start/End: Original strand, 26103045 - 26103152
Alignment:
Q  217 tattgtgtaattttctgtaacttttttatggtgctcttttaaaatagcaccctactgatgtatcttggttggtcggtttaccttttgtatgtcttgtgca 316  Q
    |||||||||||||||| ||||||||| ||||||||| |||| || || ||| ||||| ||||| ||||| ||| || ||||| |||| ||||||||||||    
T  26103045 tattgtgtaattttctttaactttttgatggtgctcctttagaacagaaccttactgttgtattttggtaggttggcttaccctttgcatgtcttgtgca 26103144  T
Q  317 cggtaaat 324  Q
    ||||||||    
T  26103145 cggtaaat 26103152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 305 - 374
Target Start/End: Complemental strand, 28569723 - 28569654
Alignment:
Q  305 atgtcttgtgcacggtaaatcgtcattgttcataatatatatctcattttagtttgttcaaaaaagaata 374  Q
    ||||||||||||||||||||   | ||||| |||||||||||||||||||||||||||||||||| ||||    
T  28569723 atgtcttgtgcacggtaaattaaccttgtttataatatatatctcattttagtttgttcaaaaaaaaata 28569654  T

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Target: chr6 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 275 - 367
Target Start/End: Complemental strand, 13094817 - 13094725
Alignment:
Q  275 tgtatcttggttggtcggtttaccttttgtatgtcttgtgcacggtaaatcgtcattgttcataatatatatctcattttagtttgttcaaaa 367  Q
    ||||| ||||| ||| ||||||||||||| ||||||||| || | |||||   | ||||| ||||||||||||||||||||||||||| ||||    
T  13094817 tgtattttggtaggttggtttaccttttgcatgtcttgttcatgataaattaaccttgtttataatatatatctcattttagtttgttaaaaa 13094725  T

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Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 285 - 369
Target Start/End: Complemental strand, 2820764 - 2820682
Alignment:
Q  285 ttggtcggtttaccttttgtatgtcttgtgcacggtaaatcgtcattgttcataatatatatctcattttagtttgttcaaaaaa 369  Q
    ||||| ||||||||||||| |||||||||||| |||||||   | ||||| ||||||||||  ||||||| ||||||||||||||    
T  2820764 ttggttggtttaccttttgcatgtcttgtgcaaggtaaattcaccttgtttataatatata--tcatttttgtttgttcaaaaaa 2820682  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 285 - 369
Target Start/End: Complemental strand, 12691831 - 12691749
Alignment:
Q  285 ttggtcggtttaccttttgtatgtcttgtgcacggtaaatcgtcattgttcataatatatatctcattttagtttgttcaaaaaa 369  Q
    ||||| ||||||||||||| |||||||||||  ||||||||    ||||| |||  |||||||||||||||||||||| ||||||    
T  12691831 ttggttggtttaccttttgcatgtcttgtgcggggtaaatcaattttgtttata--atatatctcattttagtttgttaaaaaaa 12691749  T

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