View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11527_low_22 (Length: 322)
Name: NF11527_low_22
Description: NF11527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11527_low_22 |
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Alignment Details
Target: chr4 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 11 - 307
Target Start/End: Original strand, 37347568 - 37347864
Alignment:
| Q |
11 |
ttaacattttagacatttgtatataaatattatttaatgtgtgtacatagaattttccagtaagatgaaataacgtgtatgtcaagatgacacgcctcct |
110 |
Q |
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| T |
37347568 |
ttaacattttagacatttgtatataaatattatttaatgtgtgtacatagaattttccagtaagatgaaataacgcgtatatcaagatgacacgccacct |
37347667 |
T |
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| Q |
111 |
gtttaagaattgaaaacacatcttcatcctaaaaacaagttaaaaccacatggaagtagttttgactttgactttttaatttgacaatcaacttcccttc |
210 |
Q |
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| T |
37347668 |
gtttaagaattgaaaacacatcttcatcctaaaaacaagttaaaaccacatggaagtagttttgactttgattttttaatttcacaatcaacttcccttc |
37347767 |
T |
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| Q |
211 |
atagttttaattcaaccagatttgaattttgccatttaagattacaaacaagcattgtgaaaatagtatgttagtgattgggatttgggaagttagt |
307 |
Q |
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| T |
37347768 |
atagttttaattcaaccagatttgaattttgccatttaagattacaaacaagcattgtgaaaatagtatgttagtgattgggatttgggaagttagt |
37347864 |
T |
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