View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11528_high_4 (Length: 258)

Name: NF11528_high_4
Description: NF11528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11528_high_4
NF11528_high_4
[»] chr8 (31 HSPs)
chr8 (1-258)||(21395795-21396052)
chr8 (1-258)||(21790288-21790545)
chr8 (1-258)||(21389265-21389522)
chr8 (1-152)||(21778697-21778848)
chr8 (5-157)||(31971309-31971463)
chr8 (1-157)||(16199559-16199716)
chr8 (5-157)||(45130911-45131065)
chr8 (143-256)||(17353752-17353865)
chr8 (5-155)||(21918915-21919069)
chr8 (143-258)||(19899286-19899401)
chr8 (5-157)||(20536260-20536416)
chr8 (5-157)||(18879150-18879300)
chr8 (100-258)||(16184877-16185034)
chr8 (143-258)||(19983284-19983399)
chr8 (8-157)||(28648957-28649110)
chr8 (162-258)||(19976655-19976751)
chr8 (5-157)||(22626788-22626943)
chr8 (143-258)||(21161871-21161986)
chr8 (143-258)||(24755912-24756027)
chr8 (5-157)||(18818322-18818478)
chr8 (143-251)||(21168541-21168649)
chr8 (90-256)||(23776649-23776816)
chr8 (7-157)||(22875119-22875273)
chr8 (88-157)||(25363053-25363123)
chr8 (5-140)||(16092272-16092411)
chr8 (5-157)||(7372830-7372978)
chr8 (5-157)||(21923841-21923997)
chr8 (143-228)||(377469-377554)
chr8 (25-157)||(23648628-23648761)
chr8 (143-231)||(17926547-17926635)
chr8 (1-69)||(20498611-20498681)
[»] scaffold0351 (1 HSPs)
scaffold0351 (4-157)||(16334-16487)
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-157)||(1338-1494)
scaffold0106 (1-157)||(7315-7471)
[»] chr2 (24 HSPs)
chr2 (1-157)||(20309157-20309313)
chr2 (38-258)||(40622021-40622244)
chr2 (5-157)||(38029-38183)
chr2 (144-258)||(23038227-23038341)
chr2 (4-213)||(23103254-23103465)
chr2 (87-258)||(22740773-22740945)
chr2 (144-258)||(23019519-23019633)
chr2 (5-170)||(23285917-23286082)
chr2 (87-256)||(22758530-22758700)
chr2 (5-157)||(22731147-22731303)
chr2 (27-157)||(22738093-22738224)
chr2 (1-157)||(298727-298887)
chr2 (102-258)||(22798939-22799094)
chr2 (32-170)||(23654286-23654425)
chr2 (5-157)||(23076494-23076650)
chr2 (5-157)||(23660075-23660230)
chr2 (5-152)||(23060565-23060716)
chr2 (27-157)||(22337192-22337323)
chr2 (148-258)||(45677968-45678078)
chr2 (210-258)||(23101043-23101091)
chr2 (1-69)||(7735-7805)
chr2 (143-258)||(21918129-21918244)
chr2 (5-65)||(22105461-22105524)
chr2 (143-231)||(25963557-25963645)
[»] chr7 (22 HSPs)
chr7 (4-157)||(27847746-27847899)
chr7 (1-157)||(40443440-40443597)
chr7 (50-258)||(17137876-17138083)
chr7 (50-258)||(12187113-12187320)
chr7 (87-258)||(18154649-18154821)
chr7 (5-157)||(12698883-12699040)
chr7 (143-258)||(9703458-9703573)
chr7 (5-157)||(9509241-9509397)
chr7 (100-258)||(24054618-24054775)
chr7 (5-170)||(26212048-26212217)
chr7 (1-157)||(16386160-16386320)
chr7 (87-258)||(19649297-19649469)
chr7 (5-157)||(10589091-10589246)
chr7 (8-157)||(18456326-18456478)
chr7 (162-258)||(11880463-11880559)
chr7 (8-140)||(38227536-38227671)
chr7 (147-258)||(12321555-12321666)
chr7 (5-140)||(3564294-3564433)
chr7 (5-70)||(2530139-2530205)
chr7 (5-69)||(48273441-48273508)
chr7 (1-69)||(2280121-2280191)
chr7 (5-65)||(13647377-13647440)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-258)||(174815-175073)
scaffold0021 (44-157)||(124679-124793)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-157)||(51631-51787)
[»] chr4 (29 HSPs)
chr4 (1-157)||(17046536-17046692)
chr4 (1-157)||(14053215-14053373)
chr4 (38-258)||(15121616-15121834)
chr4 (5-170)||(12902809-12902978)
chr4 (143-258)||(13569703-13569818)
chr4 (5-170)||(7088929-7089098)
chr4 (143-258)||(23843669-23843784)
chr4 (5-157)||(44052881-44053037)
chr4 (90-258)||(15093911-15094079)
chr4 (27-157)||(22636512-22636642)
chr4 (143-258)||(44675823-44675938)
chr4 (5-157)||(23374272-23374428)
chr4 (8-157)||(16270149-16270301)
chr4 (5-157)||(16377436-16377590)
chr4 (143-258)||(12570212-12570327)
chr4 (8-157)||(16239883-16240035)
chr4 (5-133)||(7798826-7798958)
chr4 (78-157)||(3096772-3096851)
chr4 (5-157)||(14038700-14038856)
chr4 (88-153)||(17047989-17048055)
chr4 (5-70)||(43256161-43256227)
chr4 (189-258)||(15124967-15125036)
chr4 (1-69)||(13853-13923)
chr4 (143-258)||(16356766-16356881)
chr4 (5-71)||(52873367-52873436)
chr4 (144-258)||(16348478-16348592)
chr4 (144-258)||(16487891-16488005)
chr4 (8-157)||(7893758-7893908)
chr4 (5-69)||(54798756-54798823)
[»] scaffold0598 (1 HSPs)
scaffold0598 (4-157)||(965-1118)
[»] chr6 (29 HSPs)
chr6 (1-157)||(16920546-16920702)
chr6 (1-157)||(22831552-22831710)
chr6 (1-158)||(11185554-11185711)
chr6 (1-124)||(35245635-35245758)
chr6 (143-258)||(19873313-19873428)
chr6 (5-157)||(20360873-20361029)
chr6 (143-258)||(19863171-19863286)
chr6 (87-258)||(25641996-25642168)
chr6 (5-157)||(20638196-20638352)
chr6 (100-258)||(22438951-22439108)
chr6 (143-258)||(22334704-22334819)
chr6 (143-258)||(22432443-22432558)
chr6 (5-157)||(29060592-29060748)
chr6 (4-157)||(20593824-20593981)
chr6 (27-157)||(25629268-25629399)
chr6 (25-258)||(15041363-15041596)
chr6 (5-157)||(18409740-18409896)
chr6 (174-258)||(16924692-16924776)
chr6 (174-258)||(31164660-31164744)
chr6 (143-258)||(15894242-15894357)
chr6 (5-71)||(16496296-16496365)
chr6 (143-258)||(18907299-18907414)
chr6 (5-70)||(27415942-27416008)
chr6 (5-157)||(19303454-19303609)
chr6 (143-258)||(21739835-21739950)
chr6 (11-157)||(22780140-22780290)
chr6 (5-71)||(20076752-20076817)
chr6 (143-258)||(21834703-21834818)
chr6 (5-153)||(17287713-17287865)
[»] chr5 (32 HSPs)
chr5 (1-258)||(37723952-37724210)
chr5 (50-258)||(22032415-22032622)
chr5 (50-258)||(18769817-18770024)
chr5 (5-157)||(21292883-21293038)
chr5 (50-258)||(23572178-23572385)
chr5 (143-258)||(26704257-26704372)
chr5 (143-258)||(26973990-26974105)
chr5 (5-152)||(8286760-8286912)
chr5 (90-256)||(21873387-21873553)
chr5 (143-258)||(23501158-23501273)
chr5 (5-157)||(23390409-23390565)
chr5 (143-255)||(23201559-23201672)
chr5 (144-255)||(14079340-14079451)
chr5 (8-157)||(24493624-24493776)
chr5 (5-170)||(22075071-22075240)
chr5 (5-157)||(9078004-9078160)
chr5 (5-157)||(24529272-24529428)
chr5 (5-157)||(25431446-25431602)
chr5 (163-258)||(23512318-23512413)
chr5 (5-157)||(25421584-25421740)
chr5 (8-157)||(13025366-13025518)
chr5 (8-157)||(13095550-13095702)
chr5 (5-71)||(21729064-21729133)
chr5 (5-71)||(21808389-21808458)
chr5 (5-70)||(18356367-18356433)
chr5 (5-70)||(20910800-20910866)
chr5 (87-170)||(22107273-22107357)
chr5 (10-69)||(22412241-22412302)
chr5 (27-150)||(1096544-1096668)
chr5 (5-71)||(18418633-18418699)
chr5 (1-68)||(20026942-20027013)
chr5 (5-52)||(21997553-21997603)
[»] scaffold0718 (1 HSPs)
scaffold0718 (1-157)||(5044-5200)
[»] scaffold0215 (1 HSPs)
scaffold0215 (38-258)||(26911-27129)
[»] chr1 (25 HSPs)
chr1 (1-157)||(38801304-38801460)
chr1 (87-258)||(21714684-21714856)
chr1 (88-255)||(48603652-48603820)
chr1 (8-170)||(27250629-27250795)
chr1 (143-258)||(20091286-20091401)
chr1 (143-258)||(42865024-42865139)
chr1 (27-157)||(22354485-22354616)
chr1 (5-170)||(21026732-21026901)
chr1 (25-258)||(22468509-22468742)
chr1 (5-157)||(50210126-50210282)
chr1 (25-256)||(21787857-21788088)
chr1 (5-153)||(22532321-22532473)
chr1 (5-157)||(34509832-34509988)
chr1 (143-258)||(6152046-6152161)
chr1 (25-157)||(20135262-20135395)
chr1 (143-258)||(18181934-18182049)
chr1 (1-69)||(21896258-21896328)
chr1 (143-254)||(22831195-22831306)
chr1 (1-69)||(21861572-21861642)
chr1 (5-70)||(33797573-33797639)
chr1 (78-157)||(22356087-22356168)
chr1 (78-157)||(22357773-22357854)
chr1 (144-228)||(21022830-21022914)
chr1 (1-101)||(35261051-35261150)
chr1 (5-52)||(20847173-20847223)
[»] scaffold0456 (1 HSPs)
scaffold0456 (1-157)||(10339-10495)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-157)||(47044-47200)
[»] scaffold0427 (1 HSPs)
scaffold0427 (5-157)||(13549-13703)
[»] scaffold0113 (1 HSPs)
scaffold0113 (5-157)||(32119-32272)
[»] scaffold0114 (2 HSPs)
scaffold0114 (8-157)||(15378-15529)
scaffold0114 (38-208)||(7378-7546)
[»] scaffold0358 (2 HSPs)
scaffold0358 (5-157)||(4764-4919)
scaffold0358 (27-157)||(13-143)
[»] scaffold0004 (1 HSPs)
scaffold0004 (87-258)||(69930-70102)
[»] scaffold1124 (1 HSPs)
scaffold1124 (50-255)||(1975-2179)
[»] scaffold0210 (2 HSPs)
scaffold0210 (50-258)||(21619-21826)
scaffold0210 (50-258)||(29511-29718)
[»] scaffold0131 (1 HSPs)
scaffold0131 (87-255)||(36592-36761)
[»] scaffold0139 (1 HSPs)
scaffold0139 (87-258)||(20117-20289)
[»] chr3 (30 HSPs)
chr3 (5-157)||(20698349-20698504)
chr3 (50-258)||(856234-856441)
chr3 (143-258)||(17524965-17525080)
chr3 (5-157)||(12399261-12399417)
chr3 (9-157)||(13442330-13442482)
chr3 (5-157)||(17487908-17488064)
chr3 (88-207)||(14179570-14179690)
chr3 (5-157)||(14972906-14973062)
chr3 (172-258)||(15877641-15877727)
chr3 (5-157)||(17499390-17499546)
chr3 (100-258)||(23408581-23408738)
chr3 (5-157)||(14576746-14576901)
chr3 (5-157)||(18438586-18438742)
chr3 (8-157)||(24153122-24153274)
chr3 (143-231)||(23077318-23077406)
chr3 (144-258)||(14878318-14878433)
chr3 (5-157)||(26686939-26687095)
chr3 (5-157)||(43840984-43841140)
chr3 (5-156)||(25476299-25476454)
chr3 (5-157)||(42386462-42386619)
chr3 (144-258)||(15060483-15060597)
chr3 (8-156)||(23083275-23083427)
chr3 (27-157)||(40213634-40213765)
chr3 (144-228)||(15051707-15051791)
chr3 (143-250)||(11862981-11863088)
chr3 (143-258)||(12496445-12496560)
chr3 (5-157)||(11424676-11424828)
chr3 (88-157)||(16796685-16796755)
chr3 (5-50)||(14572641-14572688)
chr3 (144-228)||(16909941-16910025)
[»] scaffold0029 (1 HSPs)
scaffold0029 (50-202)||(12857-13008)
[»] scaffold0101 (1 HSPs)
scaffold0101 (143-258)||(8770-8885)
[»] scaffold0403 (1 HSPs)
scaffold0403 (5-157)||(4901-5057)
[»] scaffold0193 (1 HSPs)
scaffold0193 (5-157)||(13263-13419)
[»] scaffold0043 (1 HSPs)
scaffold0043 (143-258)||(18431-18546)
[»] scaffold0261 (1 HSPs)
scaffold0261 (162-258)||(1550-1646)
[»] scaffold0031 (2 HSPs)
scaffold0031 (162-258)||(65606-65702)
scaffold0031 (27-71)||(128827-128871)
[»] scaffold0292 (2 HSPs)
scaffold0292 (8-157)||(3525-3678)
scaffold0292 (11-150)||(401-543)
[»] scaffold1842 (1 HSPs)
scaffold1842 (5-170)||(949-1117)
[»] scaffold0011 (2 HSPs)
scaffold0011 (5-170)||(167879-168047)
scaffold0011 (5-157)||(51965-52121)
[»] scaffold0297 (1 HSPs)
scaffold0297 (143-255)||(15485-15597)
[»] scaffold1895 (1 HSPs)
scaffold1895 (143-258)||(1040-1155)
[»] scaffold0555 (1 HSPs)
scaffold0555 (143-258)||(773-888)
[»] scaffold0309 (1 HSPs)
scaffold0309 (12-165)||(6669-6826)
[»] scaffold0102 (1 HSPs)
scaffold0102 (143-258)||(48273-48388)
[»] scaffold0023 (2 HSPs)
scaffold0023 (143-258)||(38292-38407)
scaffold0023 (143-255)||(23483-23594)
[»] scaffold0490 (1 HSPs)
scaffold0490 (5-157)||(2004-2160)
[»] scaffold0016 (1 HSPs)
scaffold0016 (5-157)||(1903-2059)
[»] scaffold0042 (2 HSPs)
scaffold0042 (5-157)||(24214-24372)
scaffold0042 (143-258)||(34723-34838)
[»] scaffold0174 (1 HSPs)
scaffold0174 (143-258)||(18266-18381)
[»] scaffold0149 (2 HSPs)
scaffold0149 (143-258)||(3933-4047)
scaffold0149 (143-258)||(8364-8478)
[»] scaffold0647 (1 HSPs)
scaffold0647 (5-152)||(6039-6190)
[»] scaffold0145 (2 HSPs)
scaffold0145 (8-157)||(32997-33149)
scaffold0145 (8-157)||(38816-38968)
[»] scaffold0096 (1 HSPs)
scaffold0096 (90-258)||(16162-16330)
[»] scaffold0081 (3 HSPs)
scaffold0081 (143-258)||(14863-14978)
scaffold0081 (143-258)||(23878-23993)
scaffold0081 (143-258)||(39302-39417)
[»] scaffold0540 (1 HSPs)
scaffold0540 (5-153)||(3068-3219)
[»] scaffold0141 (1 HSPs)
scaffold0141 (5-157)||(39529-39684)
[»] scaffold0049 (1 HSPs)
scaffold0049 (5-157)||(75128-75283)
[»] scaffold0671 (1 HSPs)
scaffold0671 (143-258)||(6294-6409)
[»] scaffold0231 (1 HSPs)
scaffold0231 (27-165)||(22959-23098)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-170)||(20959-21132)
[»] scaffold0035 (1 HSPs)
scaffold0035 (143-258)||(46540-46655)
[»] scaffold0908 (1 HSPs)
scaffold0908 (5-153)||(3103-3255)
[»] scaffold0175 (1 HSPs)
scaffold0175 (2-170)||(13141-13313)
[»] scaffold0122 (2 HSPs)
scaffold0122 (5-157)||(25978-26134)
scaffold0122 (5-69)||(44709-44776)
[»] scaffold0324 (1 HSPs)
scaffold0324 (193-258)||(15642-15707)
[»] scaffold0121 (1 HSPs)
scaffold0121 (5-157)||(8446-8601)
[»] scaffold0311 (1 HSPs)
scaffold0311 (143-258)||(6891-7006)
[»] scaffold0228 (3 HSPs)
scaffold0228 (27-157)||(4584-4715)
scaffold0228 (27-157)||(12166-12297)
scaffold0228 (27-157)||(22118-22249)
[»] scaffold0003 (2 HSPs)
scaffold0003 (10-157)||(339863-340012)
scaffold0003 (5-70)||(71353-71419)
[»] scaffold0056 (2 HSPs)
scaffold0056 (5-157)||(17128-17286)
scaffold0056 (143-258)||(13890-14005)
[»] scaffold0198 (1 HSPs)
scaffold0198 (102-202)||(23995-24094)
[»] scaffold0026 (2 HSPs)
scaffold0026 (8-157)||(25951-26103)
scaffold0026 (8-157)||(39913-40065)
[»] scaffold0217 (1 HSPs)
scaffold0217 (5-154)||(16516-16669)
[»] scaffold0130 (1 HSPs)
scaffold0130 (31-153)||(27911-28034)
[»] scaffold0111 (1 HSPs)
scaffold0111 (143-258)||(32626-32740)
[»] scaffold0484 (1 HSPs)
scaffold0484 (88-157)||(1052-1122)
[»] scaffold0327 (1 HSPs)
scaffold0327 (27-140)||(3460-3574)
[»] scaffold0120 (2 HSPs)
scaffold0120 (5-127)||(32901-33025)
scaffold0120 (5-127)||(45980-46104)
[»] scaffold0107 (1 HSPs)
scaffold0107 (5-70)||(15417-15483)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-69)||(12617-12687)
[»] scaffold0080 (2 HSPs)
scaffold0080 (143-202)||(18525-18584)
scaffold0080 (8-157)||(39968-40120)
[»] scaffold0037 (1 HSPs)
scaffold0037 (143-258)||(21382-21497)
[»] scaffold1296 (1 HSPs)
scaffold1296 (144-258)||(582-696)
[»] scaffold0395 (1 HSPs)
scaffold0395 (12-152)||(881-1021)
[»] scaffold0425 (1 HSPs)
scaffold0425 (143-255)||(348-460)
[»] scaffold0046 (1 HSPs)
scaffold0046 (5-72)||(28466-28536)
[»] scaffold2014 (1 HSPs)
scaffold2014 (1-69)||(1081-1151)
[»] scaffold0621 (1 HSPs)
scaffold0621 (1-69)||(8515-8585)
[»] scaffold0412 (1 HSPs)
scaffold0412 (143-258)||(6229-6344)
[»] scaffold0235 (1 HSPs)
scaffold0235 (5-67)||(11447-11512)
[»] scaffold0220 (1 HSPs)
scaffold0220 (143-258)||(4746-4861)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-69)||(53551-53621)
[»] scaffold0165 (2 HSPs)
scaffold0165 (116-157)||(3648-3689)
scaffold0165 (116-157)||(7712-7753)


Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 21396052 - 21395795
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21396052 aacaaacaacaacataggcagtatacaacagcatgagataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgcat 21395953  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtcca 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  21395952 aaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 21395853  T
Q  201 tctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21395852 tctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 21395795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 21790545 - 21790288
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21790545 aacaaacaacaacataggcagtatacaacagcatgagataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgcat 21790446  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtcca 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  21790445 aaacattataacacttcataatcaataacaacatatcttattcagcttcacagattacaattaacttcttatataggtctcattactacccaagggtcca 21790346  T
Q  201 tctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21790345 tctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 21790288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 21389522 - 21389265
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21389522 aacaaacaacaacataggtagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgcat 21389423  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtcca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| |||||||||| | ||||||||||||    
T  21389422 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacatattacaattaacttcatatattggtctcattactacccaagggtcca 21389323  T
Q  201 tctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21389322 tctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 21389265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 21778848 - 21778697
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21778848 aacaaacaacaacataggtagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgcat 21778749  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcaca 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21778748 aaacattataacacttcataatcaacaacaacatatcttattcagcttcaca 21778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 31971309 - 31971463
Alignment:
Q  5 aacagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataa 102  Q
    ||||||||||||||||||||||||  || ||||||||||| ||||||| | |||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  31971309 aacagcaacataggcagtatacaaaacaacatgacataataatatcaattccaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataa 31971408  T
Q  103 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||| ||| |||||||||||||||||||||||||| || ||||||||||||    
T  31971409 acattatatcacatcataatcaacaacaacatatcttatacatcttcacagatta 31971463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16199716 - 16199559
Alignment:
Q  1 aacaaacagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgca 99  Q
    ||||||||||||||||| |||||| ||| || ||||||||||| ||||||| ||||||||||| |||||||| | ||||||| |||||||||||||||||    
T  16199716 aacaaacagcaacatagacagtattcaaacaacatgacataataatatcaatttcaattcatctacatcttaggtatacaaatattcttcaagtaatgca 16199617  T
Q  100 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||  || |||||||||||||||||||||||||| |||||||||||||||    
T  16199616 taaacattatattacatcataatcaacaacaacatatcttatacagcttcacagatta 16199559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 45131065 - 45130911
Alignment:
Q  5 aacagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaa-ttcatcaacatcttatgcatacaaacattcttcaagtaatgcataa 102  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||||| ||||| ||||||||||||||| | ||||||  ||||||||||||||||||||    
T  45131065 aacagcaacataggcagtaaacaaacagcatgacataataatatcaatttcaaattcatcaacatcttaggtatacaattattcttcaagtaatgcataa 45130966  T
Q  103 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||| ||| ||||||||| |||||||| ||||||| |||||||||||||||    
T  45130965 acattatatcacatcataatcatcaacaacaaatcttatacagcttcacagatta 45130911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 17353865 - 17353752
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||  ||| |||||||||| |||||| | ||||||||    
T  17353865 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacacaaatcgcaatatcctcact 17353766  T
Q  243 tgcactcagttctg 256  Q
    ||||||||||||||    
T  17353765 tgcactcagttctg 17353752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 21919069 - 21918915
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaa-cattcttcaagtaatgcat 100  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||   || ||||  ||||||||||||||||||    
T  21919069 aacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataattcttcaagtaatgcat 21918970  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagat 155  Q
    |||||||||| ||| ||||||||| || ||||| ||||||  |||||||||||||    
T  21918969 aaacattatatcacatcataatcagcagcaacacatcttaaacagcttcacagat 21918915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 19899286 - 19899401
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||||||||| ||||||| ||||| | |||||||||||||||||||| |||| |||||||||||||||||   ||||||||    
T  19899286 cagcttcacagattgcagttaacttcttaaataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 19899385  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  19899386 tgcactcagttctgga 19899401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 20536260 - 20536416
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||| ||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| |    
T  20536260 aacagaaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcaca 20536359  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||| ||| ||||| ||||||  || ||||||||||||    
T  20536360 taacattatatcacatcataatcgacatcaacacatcttaaacaacttcacagatta 20536416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 18879300 - 18879150
Alignment:
Q  5 aacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 103  Q
    |||||||||||||||||||||||| | ||  ||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||  | ||    
T  18879300 aacagcaacataggcagtatacaaaaaca--acataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgctcataa 18879203  T
Q  104 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||| ||| |||||||||||| || || |||||| ||||||||||||||||    
T  18879202 cattatatcacatcataatcaacatcagcacatctta-tcagcttcacagatta 18879150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 258
Target Start/End: Original strand, 16184877 - 16185034
Alignment:
Q  100 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtcc 199  Q
    ||||||||| | ||| | ||||||||||  ||||| || ||| |||||||||||||| ||  |||| ||||||||||||| ||||| | |||| ||||||    
T  16184877 taaacattaaatcacattataatcaacattaacatctcatat-cagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtcc 16184975  T
Q  200 atctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    ||||||||| |||| ||||||||||| |||||   |||| ||||||| |||||||||||    
T  16184976 atctctaatcaaattatgcgacacaggtcgcaacatcctaacttgcattcagttctgga 16185034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 19983284 - 19983399
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||||||||| ||||||| ||||| | |||| || |||||||||||| |||| |||||||||||||||||   |||||| |    
T  19983284 cagcttcacagattgcagttaacttcttaaataggtcacattactacccagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcatt 19983383  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||| ||||    
T  19983384 tgcactcagttttgga 19983399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 28649110 - 28648957
Alignment:
Q  8 agcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 103  Q
    |||||||||||||||||||   |||||||||||||||| ||||||||| ||| ||| ||||||||||   |||||  |||  |||||||||||  || ||    
T  28649110 agcaacataggcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaattatacattcataattcaagtaatgtgtataa 28649011  T
Q  104 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||| ||| |||||||||||| ||||| ||||||  |||||||||| ||||    
T  28649010 cattatatcacatcataatcaacatcaacacatcttaaacagcttcacatatta 28648957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 19976655 - 19976751
Alignment:
Q  162 taacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    |||||||||| ||||||| ||||| | || | || |||||||||||| |||| |||||||||||||||||   ||||||||||||||||||||||||    
T  19976655 taacttcttaaataggtcacattactacctagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctgga 19976751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 22626788 - 22626943
Alignment:
Q  5 aacagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata- 101  Q
    ||||||||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || ||||||||||||  ||     
T  22626788 aacagcaacataggcagtatacaaaacaacatgacataataatatcaaatacaaatcaacaacatcttaaatattcaattatacttcaagtaatgtgtat 22626887  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||| ||| |||| |||| || ||||| ||||||  |||||||||||||||    
T  22626888 aacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagatta 22626943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 21161986 - 21161871
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  ||||||||| |||||||   |||| | ||||| |||||||||||||| |||  || ||||||||||||||   ||||||||    
T  21161986 cagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaactatacgacacagatcgcaacatcctcact 21161887  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  21161886 tgcactcagttctgga 21161871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 24755912 - 24756027
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||| || |||||||||| ||||| | |||||||||||||||||||  || | ||||||||||| |||||   | ||||||    
T  24755912 cagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcact 24756011  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  24756012 tgcactcagttctgga 24756027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 18818478 - 18818322
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||| |  || ||| || |||||||   || |||  || |||||||||||||| |    
T  18818478 aacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaagtcaacatcatcttaaatattcaattatacttcaagtaatgcaca 18818379  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  18818378 taacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 18818322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 251
Target Start/End: Complemental strand, 21168649 - 21168541
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  ||||||||| |||||||   |||| | ||||| |||||||||||||| |||  |||||||||||||||||   ||||||||    
T  21168649 cagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaactatgcgacacagatcgcaacatcctcact 21168550  T
Q  243 tgcactcag 251  Q
    |||||||||    
T  21168549 tgcactcag 21168541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 256
Target Start/End: Complemental strand, 23776816 - 23776649
Alignment:
Q  90 aagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattg 188  Q
    |||||||||| | |||||||||  || ||||| |||||| |||||| || ||  |||||||||| ||| ||  |||||||||||||||||| ||||| |     
T  23776816 aagtaatgcacataacattatataacatcatattcaacatcaacatttcataa-cagcttcacaaattgcagttaacttcttatataggtcacattacta 23776718  T
Q  189 cccaagggtccatctctaattaaatcatgcgacacaga-tcgcattttcctcacttgcactcagttctg 256  Q
    || ||| ||||||||||||  |||| |||||||||||| ||||| | ||||  ||||||||||||||||    
T  23776717 cctaagtgtccatctctaaccaaattatgcgacacagattcgcaatatcctagcttgcactcagttctg 23776649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 157
Target Start/End: Original strand, 22875119 - 22875273
Alignment:
Q  7 cagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 103  Q
    |||||||| |||||||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || ||    
T  22875119 cagcaacacaggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcgtataa 22875218  T
Q  104 cattataacacttcataatcaacaacaacatatctt-attcagcttcacagatta 157  Q
    ||||||| ||| |||||||||||| ||||| ||||| |  |||||||||||||||    
T  22875219 cattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagatta 22875273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 25363123 - 25363053
Alignment:
Q  88 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  |||||||||||||||    
T  25363123 tcaagtaatgcataaaacattataccacatcataatcaacaacaacacatcttaaacagcttcacagatta 25363053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 16092411 - 16092272
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||||||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  || ||||||||| ||    
T  16092411 aacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataatttaagtaatgcgta 16092312  T
Q  102 -aacattataacacttcataatcaacaacaacatatctta 140  Q
     ||||||||| ||| |||||||||||| ||||| ||||||    
T  16092311 taacattatatcacatcataatcaacatcaacacatctta 16092272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 7372830 - 7372978
Alignment:
Q  5 aacagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||   |||||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||       
T  7372830 aacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgc--- 7372926  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
        ||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  7372927 ----ttatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 7372978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 21923997 - 21923841
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||||||||||||||||| |||||   || |||||||| || ||||||| | ||| ||| ||||||||||   || |||  || |||||||||||||| |    
T  21923997 aacagcaacataggcagtctacaaaaacaacatgacatgataatatcaattgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgcaca 21923898  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||| ||||    | |||||||||||||||||| ||||||  |||||||||||||||    
T  21923897 taaccttattttgcatcataatcaacaacaacacatcttaaacagcttcacagatta 21923841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 377469 - 377554
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatc 228  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| | || ||||||||||| ||||| || ||| || |||||||||    
T  377469 cagcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccctaatcaattcaagcaacacagatc 377554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 23648628 - 23648761
Alignment:
Q  25 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatc 123  Q
    |||||| ||||||||||| ||||||  | |||| || ||||||||||   || |||  |  |||||||||||||| | ||||||||| ||| ||||||||    
T  23648628 acaacaacatgacataataatatcatttgcaatacaacaacatcttaaatattcaataaaacttcaagtaatgcacacaacattatatcacatcataatc 23648727  T
Q  124 aacaacaacatatcttattcagcttcacagatta 157  Q
    |||| ||||| ||||||  |||||| ||||||||    
T  23648728 aacatcaacacatcttaaacagcttaacagatta 23648761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 17926635 - 17926547
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgca 231  Q
    |||||||||||||| ||| |||| ||||| ||||||| ||||| | || ||||||||| | ||||| || | |||||| ||||||||||    
T  17926635 cagcttcacagatttcaattaacatcttaaataggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgca 17926547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 20498611 - 20498681
Alignment:
Q  1 aacaaacagcaacataggcagta--tacaacagcatgacataattatatcaaattcaattcatcaacatct 69  Q
    |||||||||||||||||||||||  || || ||||||| ||||  ||||||||| ||| ||||||||||||    
T  20498611 aacaaacagcaacataggcagtatgtaaaatagcatgatataacaatatcaaatgcaagtcatcaacatct 20498681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 16334 - 16487
Alignment:
Q  4 aaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  16334 aaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatattatgtatacaaacattcttcaagtaatgcataaa 16433  T
Q  104 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16434 cattataacacatcataatcaacaacaacatatcttattcagcttcacagatta 16487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 141; Significance: 5e-74; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 1338 - 1494
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1338 aacaaacagcaacataggcagtgtacaacatcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgcat 1437  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1438 aaacattataacacttcataatcaacaacaacatatcttattcagcttcatagatta 1494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 7315 - 7471
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    |||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7315 aacaaacaacaacataggcagtatacaacaacatgaaataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgcat 7414  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7415 aaacattataacacttcataatcaacaacaacatatcttattcagcttcatagatta 7471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 5e-74; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 20309157 - 20309313
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  20309157 aacaaatagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcat 20309256  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20309257 aaacattataacacatcataatcaacaacaacatatcttattcagcttcacagatta 20309313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 40622244 - 40622021
Alignment:
Q  38 ataattatatcaaattcaattcatcaacatcttatgcataca-----aacattcttcaagtaatgcataaacattataacacttcataatcaacaacaac 132  Q
    ||||||||||||| |||||||||||||||||||||| |||||     || ||||||||||||||||||||||||||||| || ||||||||||||  |||    
T  40622244 ataattatatcaa-ttcaattcatcaacatcttatgtatacagtacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaac 40622146  T
Q  133 atatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcat 232  Q
    || || ||  |||||||||||||| ||  |||||||||||||||||||||||| | |||||||||||||||||||  |||  |||||| ||||||||||     
T  40622145 atctcataa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaaacaaaatatgcgaaacagatcgcaa 40622047  T
Q  233 tttcctcacttgcactcagttctgga 258  Q
    | ||||||||||||||||||||||||    
T  40622046 tatcctcacttgcactcagttctgga 40622021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 38183 - 38029
Alignment:
Q  5 aacagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataa 102  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||||| ||| |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  38183 aacagcaacataggcagtatacaaaacagcatgacataataatatcaatttcgattcatcatcatcttatgtatacaaacattcttcaagtaatgcataa 38084  T
Q  103 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||| ||| ||||||||||||||||||| |||||| |||||||| ||||||    
T  38083 acattatatcacatcataatcaacaacaacatgtcttatacagcttcagagatta 38029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 144 - 258
Target Start/End: Original strand, 23038227 - 23038341
Alignment:
Q  144 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcactt 243  Q
    ||||||||||||| || |||||||||||||||||||||| || | |||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  23038227 agcttcacagattgcagataacttcttatataggtctcaatactacccaagggtccatctctaatcaaatcatgcgacacagatcgcaatttcctcactt 23038326  T
Q  244 gcactcagttctgga 258  Q
    |||||||||||||||    
T  23038327 gcactcagttctgga 23038341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 213
Target Start/End: Complemental strand, 23103465 - 23103254
Alignment:
Q  4 aaacagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgca--t 100  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |  ||| ||  |||  ||||||| |||||  |    
T  23103465 aaacagcaacataggcagtatacaaacagcatgacatgattatatcaaattcaattcatcaacatctcaatcattcattcataattcaagtcatgcaatt 23103366  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtcca 200  Q
    |||||||||| ||| ||| |  |||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||||||||||| | || |||||||||    
T  23103365 aaacattatatcacatcaaatccaacactaacatctcata-acagcttcacagattgcagttaacttcttatataggtctcattactaccaaagggtcca 23103267  T
Q  201 tctctaattaaat 213  Q
    |||||||| ||||    
T  23103266 tctctaatcaaat 23103254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 258
Target Start/End: Complemental strand, 22740945 - 22740773
Alignment:
Q  87 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 184  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  || ||||| ||||| ||  |||||||||||||||||||||||    
T  22740945 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-caacttcaaagattgcagttaacttcttatataggtctcatt 22740847  T
Q  185 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    | | |||||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  22740846 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgga 22740773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 258
Target Start/End: Complemental strand, 23019633 - 23019519
Alignment:
Q  144 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcactt 243  Q
    ||||||||| ||| |||||||||||||||||||||| ||||| | |||||||||||| |||||||||||| ||||||||||||||||| | |||| ||||    
T  23019633 agcttcacaaattgcaaataacttcttatataggtcacattactacccaagggtccaactctaattaaattatgcgacacagatcgcaatatcctgactt 23019534  T
Q  244 gcactcagttctgga 258  Q
    |||||||||||||||    
T  23019533 gcactcagttctgga 23019519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 23285917 - 23286082
Alignment:
Q  5 aacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa- 103  Q
    |||||||||||||||||||||||| | || |||||||| ||||||| | ||||||||||||||||||   || ||||  ||||||||||||||||||||     
T  23285917 aacagcaacataggcagtatacaaaaaca-gacataataatatcaattgcaattcatcaacatcttaaatattcaaatgttcttcaagtaatgcataaaa 23286015  T
Q  104 cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 170  Q
    ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  23286016 cattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacatctt 23286082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 256
Target Start/End: Complemental strand, 22758700 - 22758530
Alignment:
Q  87 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 184  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  |||||||| ||||| ||  ||| |||||||||||||||||||    
T  22758700 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-cagcttcatagattgcagttaatttcttatataggtctcatt 22758602  T
Q  185 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctg 256  Q
    | | |||||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||    
T  22758601 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctg 22758530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 22731303 - 22731147
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||||||||||||||||| |||||   |||||||||||||| ||||||| | |||||||||||||| |||   || |||| ||||||||||||||||| |    
T  22731303 aacagcaacataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatattaaatattcaaatattcttcaagtaatgcaca 22731204  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  22731203 taacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 22731147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 22738224 - 22738093
Alignment:
Q  27 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 125  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| | ||||||||| ||| ||||||||||    
T  22738224 aacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcacataacattatatcacatcataatcaa 22738125  T
Q  126 caacaacatatcttattcagcttcacagatta 157  Q
    || ||||| ||||||  |||||||||||||||    
T  22738124 catcaacacatcttaaacagcttcacagatta 22738093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 298887 - 298727
Alignment:
Q  1 aacaaacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatg 97  Q
    ||||||||||||||||||||||||||||   ||||||||||||| |||||||| | ||||||| ||||||||||   || |||| | |  ||||||||||    
T  298887 aacaaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattcaaataattctcaagtaatg 298788  T
Q  98 cat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||| |||||||||| ||| ||||||| || ||||||| ||||||| |||||||||| ||||    
T  298787 cataaaacattatatcacatcataattaataacaacacatcttatacagcttcacatatta 298727  T

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Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 258
Target Start/End: Complemental strand, 22799094 - 22798939
Alignment:
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccat 201  Q
    ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||| ||| ||  |||||||||||||||||| ||||| | |||| ||||||||    
T  22799094 aacattatatcacatcatattcaacattaacatttcataa-cagcttcacaaattgcagttaacttcttatataggtcacattactacccaggggtccat 22798996  T
Q  202 ctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    ||||||| |||| ||||||||||||||||| | |||| ||||||||| |||||||||    
T  22798995 ctctaatcaaattatgcgacacagatcgcaatatcctaacttgcacttagttctgga 22798939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 23654425 - 23654286
Alignment:
Q  32 catgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa-cattataacacttcataatcaacaaca 130  Q
    ||||||||||| ||||||| | ||||||||||||||||||   || |||  |||  |||||||||||||||| ||||||| ||| ||||||| |||||||    
T  23654425 catgacataataatatcaattgcaattcatcaacatcttaaatattcaagtattactcaagtaatgcataaaacattatatcacatcataattaacaaca 23654326  T
Q  131 acatatcttattcagcttcacagattacaaataacttctt 170  Q
    ||| ||||||  ||||||||||||||| || |||| ||||    
T  23654325 acacatcttaaacagcttcacagattataattaacctctt 23654286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 23076494 - 23076650
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| ||| ||||||   || |||  || |||||||||||||| |    
T  23076494 aacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacaatatcttaaatattcaattatacttcaagtaatgcaca 23076593  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| ||||| | ||||  |||||||||||||||    
T  23076594 taacattatatcacatcataatcaacatcaacacagcttaaacagcttcacagatta 23076650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 23660075 - 23660230
Alignment:
Q  5 aacagcaacataggcagtatac--aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata- 101  Q
    ||||||||||||||||||||||  ||||| |||||||||| ||||||||| ||| ||| ||||||||||   || ||| |||   ||||||||||| ||     
T  23660075 aacagcaacataggcagtatacgaaacaggatgacataataatatcaaatgcaaatcaacaacatcttaaatattcaatcataactcaagtaatgcgtat 23660174  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||| ||| |||||||||||| ||||| ||||||  |||||| ||| ||||    
T  23660175 aacattatatcacatcataatcaacatcaacacatcttaaacagctttacaaatta 23660230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 23060565 - 23060716
Alignment:
Q  5 aacagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||   |||| ||||||||||| ||||||| | ||| ||| ||||||||||   ||  ||  || |||||||||||||| |    
T  23060565 aacagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatattaaattatacttcaagtaatgcaca 23060664  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcaca 152  Q
     ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||    
T  23060665 taacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca 23060716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 22337192 - 22337323
Alignment:
Q  27 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 125  Q
    |||||||||||||||| ||||||||| |||  || |||||||| |   |||||  |||  |||||||||||| || ||||||||| ||| ||||||||||    
T  22337192 aacagcatgacataataatatcaaatgcaagacaacaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaa 22337291  T
Q  126 caacaacatatcttattcagcttcacagatta 157  Q
    || ||||||||||||  || ||||||| ||||    
T  22337292 catcaacatatcttaaacaacttcacaaatta 22337323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 258
Target Start/End: Complemental strand, 45678078 - 45677968
Alignment:
Q  148 tcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcac 247  Q
    ||||||||| ||| |||| || |||||||||| ||||| | || ||| ||||||| ||||| || |||||||||||||||| ||   | |||| ||||||    
T  45678078 tcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaactcatgcgacacagatcacaacattctcaattgcac 45677979  T
Q  248 tcagttctgga 258  Q
    |||||||||||    
T  45677978 tcagttctgga 45677968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 23101091 - 23101043
Alignment:
Q  210 aaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| ||||    
T  23101091 aaatcatgcgacatagatcgcattatcctcacttgcactcagttttgga 23101043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 7805 - 7735
Alignment:
Q  1 aacaaacagcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 69  Q
    ||||||||||||||||||||||||  | |||| ||||| ||||  ||||||||| ||| ||||||||||||    
T  7805 aacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 7735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 21918244 - 21918129
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||| ||||| ||||||| ||||| | || ||||||||| |  |||| || | |||||| ||||||||||   |||| |||    
T  21918244 cagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtccaaccataatcaatttatgcgaaacagatcgcaacatcctaact 21918145  T
Q  243 tgcactcagttctgga 258  Q
    |||| |||||||||||    
T  21918144 tgcattcagttctgga 21918129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 22105461 - 22105524
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 65  Q
    |||||||||||||||||||| |||   |||||||||||||| ||||||||| ||| ||| ||||    
T  22105461 aacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaac 22105524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 25963645 - 25963557
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgca 231  Q
    |||||||||||||| ||| |||| ||||| ||||||| ||||| | || ||||||||| | ||||| || | ||| || ||||||||||    
T  25963645 cagcttcacagatttcaattaacatcttaaataggtcacattactacctaagggtccaaccctaatcaacttatgagaaacagatcgca 25963557  T

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Target: chr7 (Bit Score: 134; Significance: 8e-70; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 27847899 - 27847746
Alignment:
Q  4 aaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa 103  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27847899 aaacagcaacataggcagtgtacaacagtatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgcataaa 27847800  T
Q  104 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  27847799 cattatcacacatcataatcaacaacaacatatcttattcagcttcacagatta 27847746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 40443440 - 40443597
Alignment:
Q  1 aacaaacagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgca 99  Q
    |||||||||||||||| |||||| |||| |||||||||||||| ||||||| |||||||||||||||||||| | ||||||| |||||||||||||||||    
T  40443440 aacaaacagcaacatacgcagtaaacaaacagcatgacataataatatcaatttcaattcatcaacatcttaggtatacaaatattcttcaagtaatgca 40443539  T
Q  100 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||||    
T  40443540 taaacattatatcacatcataatcaacaacgacatatcttatacagcttcacagatta 40443597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 50 - 258
Target Start/End: Complemental strand, 17138083 - 17137876
Alignment:
Q  50 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 149  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || ||||| ||||||  ||||| || || ||||||||    
T  17138083 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagcttc 17137985  T
Q  150 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 249  Q
    ||||||| ||  |||||||||||||||||||||||| | || ||||||||||| ||||| || ||| || ||||||||| ||   | |||||||||||||    
T  17137984 acagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactc 17137885  T
Q  250 agttctgga 258  Q
    |||||||||    
T  17137884 agttctgga 17137876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 258
Target Start/End: Original strand, 12187113 - 12187320
Alignment:
Q  50 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 149  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || ||||| |||||   ||||| ||||| ||||||||    
T  12187113 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaactcaaacatctctta-tcagcttc 12187211  T
Q  150 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 249  Q
    ||||||| ||  |||||||||||||||||||||||| | || || |||||||||||||| || ||| || ||| | ||| |  | | |||||||||||||    
T  12187212 acagattgcagttaacttcttatataggtctcattactacctaatggtccatctctaatcaattcaagcaacatatatcactatattctcacttgcactc 12187311  T
Q  250 agttctgga 258  Q
    |||||||||    
T  12187312 agttctgga 12187320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 258
Target Start/End: Complemental strand, 18154821 - 18154649
Alignment:
Q  87 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 184  Q
    |||||||||||||  ||||||||||| | | ||||| ||||||  ||||| || ||  |||||||||| ||| ||  |||||||||||||||||||||||    
T  18154821 ttcaagtaatgcaattaaacattatatcgcatcatattcaacattaacatctcataa-cagcttcacatattgcagttaacttcttatataggtctcatt 18154723  T
Q  185 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    | | ||||| ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18154722 actacccaatggtccatctttaatcaaatcatgcgacacagatcgcatttccctcacttgcactcagttctgga 18154649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 12698883 - 12699040
Alignment:
Q  5 aacagcaacataggcagtatacaa----cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    ||||||||||||||||||||||||    |||||||||||||| ||||||| | ||||||||||||||||||   || |||| |||||||||||||||||     
T  12698883 aacagcaacataggcagtatacaaaacacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcac 12698982  T
Q  101 a-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    | ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  12698983 ataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 12699040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 9703458 - 9703573
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| | |||||||||||||||||||| |||| ||||||||| ||||||| | ||||||||    
T  9703458 cagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaattatgcgacacggatcgcaatatcctcact 9703557  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  9703558 tgcactcagttctgga 9703573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 9509241 - 9509397
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||| ||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| |    
T  9509241 aacagtaacataggcagtatacaataacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcaca 9509340  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     |||| |||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  9509341 taacactatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 9509397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 100 - 258
Target Start/End: Original strand, 24054618 - 24054775
Alignment:
Q  100 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtcc 199  Q
    ||||||| ||| ||| ||||||||||||  ||||| || ||  |||||||||||||| ||  ||||| |||||||||||||||||| | |||||||||||    
T  24054618 taaacatcatatcacatcataatcaacactaacatctcataa-cagcttcacagattgcagttaactccttatataggtctcattactacccaagggtcc 24054716  T
Q  200 atctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    |||||||||  ||| ||||||||||||||||| | | ||||||| ||||||||||||||    
T  24054717 atctctaatcgaattatgcgacacagatcgcaatattctcactttcactcagttctgga 24054775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 26212048 - 26212217
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat- 100  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||   || |||| | |  |||||||||||||     
T  26212048 aacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataattctcaagtaatgcata 26212147  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 170  Q
    |||||||||| ||| | |||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  26212148 aaacattatatcacattataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 26212217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16386320 - 16386160
Alignment:
Q  1 aacaaacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatg 97  Q
    |||||||| | |||||||||||||||||   ||||||||||||| |||||||| |  | |||||||||||||||   || |||||| |  ||||||||||    
T  16386320 aacaaacaacgacataggcagtatacaaaatcagcatgacataaatatatcaattgtatttcatcaacatcttaaatattcaaacaattctcaagtaatg 16386221  T
Q  98 cataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||| |||||||  || |||||||||||||||||| ||||||  |||||||||||||||    
T  16386220 cataaaacattatattacatcataatcaacaacaacacatcttaaacagcttcacagatta 16386160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 258
Target Start/End: Complemental strand, 19649469 - 19649297
Alignment:
Q  87 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 184  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  |||||  ||||  | |||||||||||| ||  |||||||| || ||||||||| |    
T  19649469 ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatcacttaa-ctgcttcacagattgcagttaacttctaatttaggtctcaat 19649371  T
Q  185 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    | | |||||||||||||||||||| |||| ||||||||||||||||| | ||||||||| ||||| ||||||||    
T  19649370 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttacactcggttctgga 19649297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 10589091 - 10589246
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||||||||||| |||||||||||   || ||||||||||| ||||||| | ||||||| |||||||||     | |||| |||||||||| ||||||||    
T  10589091 aacagcaacatatgcagtatacaaaaacaacatgacataatcatatcaattgcaattcaacaacatcttcaatgttcaaatattcttcaagcaatgcata 10589190  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||| ||| ||||||||| |||||||| ||||||   ||||||||||||||    
T  10589191 aacattatatcacatcataatcagcaacaacacatcttaaatagcttcacagatta 10589246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 18456478 - 18456326
Alignment:
Q  8 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 104  Q
    |||||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || |||||||||||||| | |||    
T  18456478 agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgcacataac 18456379  T
Q  105 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  18456378 attatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 18456326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 11880463 - 11880559
Alignment:
Q  162 taacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    |||| ||||||||||||| ||||| | |||||||||||||||| ||| |||| |||||||||| ||||||   ||||||||||||||||||||||||    
T  11880463 taacatcttatataggtcacattactacccaagggtccatctcaaatcaaattatgcgacacatatcgcaacatcctcacttgcactcagttctgga 11880559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 38227536 - 38227671
Alignment:
Q  8 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 104  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || |||||| ||||| | | | |    
T  38227536 agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaattaatgtacatatc 38227635  T
Q  105 attataacacttcataatcaacaacaacatatctta 140  Q
    |||||| ||| || ||||||||| ||||||||||||    
T  38227636 attatatcacatcttaatcaacatcaacatatctta 38227671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 258
Target Start/End: Complemental strand, 12321666 - 12321555
Alignment:
Q  147 ttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgca 246  Q
    |||||||||| ||  |||| ||||||||||||| ||||| | || ||| ||||||| ||||| || ||||||||||||||||||    | |||| |||||    
T  12321666 ttcacagattgcagttaacatcttatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgctacattctcatttgca 12321567  T
Q  247 ctcagttctgga 258  Q
    ||||||||||||    
T  12321566 ctcagttctgga 12321555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 3564433 - 3564294
Alignment:
Q  5 aacagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||   |||| ||||||||||| |||||||||  || ||| |||||||| |   |||||  |||  |||||||||||| ||    
T  3564433 aacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgtaagtcaacaacatctcaattatacattcataattcaagtaatgcgta 3564334  T
Q  102 -aacattataacacttcataatcaacaacaacatatctta 140  Q
     ||||||| | ||| |||||||||||| ||||| ||||||    
T  3564333 taacattagatcacatcataatcaacatcaacacatctta 3564294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 2530205 - 2530139
Alignment:
Q  5 aacagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 70  Q
    ||||||||||||||||  |||||| || ||||||||||| ||||||| ||||||||| |||||||||    
T  2530205 aacagcaacataggcaacatacaaacaacatgacataataatatcaatttcaattcaacaacatctt 2530139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 48273441 - 48273508
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatct 69  Q
    |||||||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||    
T  48273441 aacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 48273508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2280191 - 2280121
Alignment:
Q  1 aacaaacagcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 69  Q
    |||||||| |||||||||||||||  | |||||||||| ||||| ||||||||| ||| ||| ||||||||    
T  2280191 aacaaacaacaacataggcagtatgcaaaacagcatgatataataatatcaaatgcaaatcaacaacatct 2280121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 13647377 - 13647440
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaac 65  Q
    |||||||||||||||||||| |||   |||||||||||||| ||||||||| ||| ||| ||||    
T  13647377 aacagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaac 13647440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 174815 - 175073
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgca- 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |  ||| ||  |||  |||||||||||||     
T  174815 aacaaacagcaacataggcagtatacaacagcatgacatgattatatcaaattcaattcaacaacatctcaatcattcattcataattcaagtaatgcaa 174914  T
Q  100 -taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtc 198  Q
     ||||||||||| ||| ||||| ||||||  ||||| || || | ||||||||||||| ||  |||||||||||||||||||||||| | || |||||||    
T  174915 ctaaacattatatcacgtcatattcaacactaacatctcataat-agcttcacagatttcagttaacttcttatataggtctcattactaccaaagggtc 175013  T
Q  199 catctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  175014 catctctaatcaaatcatgcgacacagatcgcattttcctcacttggactcggttctgga 175073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 157
Target Start/End: Original strand, 124679 - 124793
Alignment:
Q  44 atatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaacaacaacatatcttatt 142  Q
    ||||||| | |||||||||||| | |||   || |||| ||||||||||||||||||| ||||||||| ||| |||||||||||| ||||| ||||||      
T  124679 atatcaattgcaattcatcaacgttttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaa 124778  T
Q  143 cagcttcacagatta 157  Q
    |||||||||||||||    
T  124779 cagcttcacagatta 124793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 51631 - 51787
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||| || ||||||| |||||||    
T  51631 aacaaacagcaacataggcagtatacaacatcatgacataattataacaaattcaattcatcaacatcttatgtatacaaatatccttcaagaaatgcat 51730  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51731 aaacattataacacttcatattcaacaacaacatatcttattcagcttcacagatta 51787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 7e-67; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 17046536 - 17046692
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  17046536 aacaaacagcaacataggtagtatagaacaacatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgtat 17046635  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  17046636 aaacattataacacatcttaatcaacaacaacatatcttattcagcttcacagatta 17046692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 14053373 - 14053215
Alignment:
Q  1 aacaaacagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacat-cttatgcatacaaacattcttcaagtaatgc 98  Q
    |||||||| || ||||| |||||||||| |||||||||||||| ||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  14053373 aacaaacaacagcatagacagtatacaaacagcatgacataataatatcaatttcaattcatcaacattcttatgcatacaaatattcttcaagtaatgc 14053274  T
Q  99 ataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||| ||| |||||||||||||||||||||||||| | |||||||||||||    
T  14053273 ataaacattatatcacatcataatcaacaacaacatatcttatacggcttcacagatta 14053215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 15121834 - 15121616
Alignment:
Q  38 ataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatc 137  Q
    ||||||||||||| |||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || |||||||||||   ||||| ||    
T  15121834 ataattatatcaa-ttcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactcaaacatctc 15121736  T
Q  138 ttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcc 237  Q
     || ||||| ||||||||| ||  |||||||||||||||||||||||| | || || ||||||| |||||  || | || ||||||||||||||   | |    
T  15121735 ata-tcagcctcacagattgcagttaacttcttatataggtctcattactacctaatggtccatgtctaaacaagttattcgacacagatcgcaaagttc 15121637  T
Q  238 tcacttgcactcagttctgga 258  Q
    ||||||||||||| |||||||    
T  15121636 tcacttgcactcaattctgga 15121616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 12902809 - 12902978
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||| |  |||||||||||||||||   || |||| ||| |||||||||||||||    
T  12902809 aacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgtaattcatcaacatcttaaatattcaaatattattcaagtaatgcata 12902908  T
Q  102 aa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 170  Q
    || ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  12902909 aaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 12902978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 13569703 - 13569818
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| | |||||||||||||||||||| |||| ||||||||| ||||||| | ||||||||    
T  13569703 cagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaattatgcgacacggatcgcaatatcctcact 13569802  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  13569803 tgcactcagttctgga 13569818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 7088929 - 7089098
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat- 100  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||| ||||||||||||||     
T  7088929 aacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttacatattcaaatattattcaagtaatgcata 7089028  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 170  Q
    |||||||||| ||| ||||||| | |||||||| ||||||  || |||||||||||| || |||| ||||    
T  7089029 aaacattatatcacatcataattagcaacaacacatcttaaacaacttcacagattataattaacctctt 7089098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 23843669 - 23843784
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||| ||||||||||||| |||||   |||||||||||||||||||| |||| |||||||||||||||||   ||||||||    
T  23843669 cagcttcacagattgcagttaacatcttatataggtcacattaccacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 23843768  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  23843769 tgcactcagttctgga 23843784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 44052881 - 44053037
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||| |||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||  |    
T  44052881 aacatcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgctca 44052980  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| || || ||||||  |||||||||||||||    
T  44052981 taacattatatcacatcataatcaacatcagcacatcttaaacagcttcacagatta 44053037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 90 - 258
Target Start/End: Original strand, 15093911 - 15094079
Alignment:
Q  90 aagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattg 188  Q
    |||||||||| | ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||| ||||| ||  |||||||||||||||||| ||||| |     
T  15093911 aagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcagagattgcagttaacttcttatataggtcacattacta 15094009  T
Q  189 cccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
     ||||||||||||||||||| |||| ||||||||||||||||| | |||| |||||||||||||| ||||    
T  15094010 accaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctaacttgcactcagttttgga 15094079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 22636512 - 22636642
Alignment:
Q  27 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 125  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||||| ||||||||| ||| |||||||| |    
T  22636512 aacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcatataacattatatcacatcataatcga 22636611  T
Q  126 caacaacatatcttattcagcttcacagatta 157  Q
    || ||||| ||||||  |||||||||||||||    
T  22636612 catcaacacatctta-acagcttcacagatta 22636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 44675823 - 44675938
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||||||||| ||||||| ||||| | || | ||||||||||||||| |||| |||||||||||||||||   ||||||||    
T  44675823 cagcttcacagattgcagttaacttcttaaataggtcacattactacctaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 44675922  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  44675923 tgcactcagttctgga 44675938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 23374428 - 23374272
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat- 100  Q
    ||||||||||||||||||||||||   ||||||||||||| |||||||| | ||||||| ||||||||||   || |||| | |  |||||||||||||     
T  23374428 aacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatattcaaataattctcaagtaatgcata 23374329  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||| ||| |||||||||||||||||| ||||||   ||||||| ||||||    
T  23374328 aaacattatatcacatcataatcaacaacaacagatcttaaaaagcttcagagatta 23374272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 16270301 - 16270149
Alignment:
Q  8 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 104  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||| ||| | | ||||||||||   || |||  || |||||||||||||| | |||    
T  16270301 agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattcaattatacttcaagtaatgcacataac 16270202  T
Q  105 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  16270201 attatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 16270149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 16377590 - 16377436
Alignment:
Q  5 aacagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-a 102  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || |    
T  16377590 aacagcaacataggcagtatacaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacattcataattcaagtaatgcgtata 16377491  T
Q  103 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||| ||| |||||||||||| ||||  ||||||  ||||| |||||||||    
T  16377490 acattatatcacatcataatcaacatcaacgcatcttaaacagctccacagatta 16377436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 12570212 - 12570327
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||| || |||||||||| ||||| | |||||||||||||||||||  || | ||||||||||| |||||   | ||||||    
T  12570212 cagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcact 12570311  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  12570312 tgcactcagttctgga 12570327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 16240035 - 16239883
Alignment:
Q  8 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 104  Q
    ||||| |||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || ||| |||||||||| | |||    
T  16240035 agcaaaataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatactttaagtaatgcaaataac 16239936  T
Q  105 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||| ||  |||||||||||| ||||| ||||||  ||||||| |||||||    
T  16239935 attatatcatatcataatcaacatcaacacatcttaaacagcttcgcagatta 16239883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 133
Target Start/End: Original strand, 7798826 - 7798958
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||| | ||| ||||||||||||||   || |||  || |||||||||||||| |    
T  7798826 aacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcatcaacatcttaaatattcaattatacttcaagtaatgcaca 7798925  T
Q  102 -aacattataacacttcataatcaacaacaaca 133  Q
     |||||| || |||  ||||||||||| |||||    
T  7798926 taacattgtatcacaacataatcaacatcaaca 7798958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 3096772 - 3096851
Alignment:
Q  78 caaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||| ||||||||||||||||||||||||| || | | ||||||||| |||||||| ||||||  |||||||||| ||||    
T  3096772 caaatattcttcaagtaatgcataaacattgtatctcatcataatcagcaacaacacatcttaaacagcttcacatatta 3096851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 14038700 - 14038856
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||||||||| | |||||||||||   || |||| |||||| ||||||||| ||| ||| |||||||| |   |||||  |||  ||||||||||||| |    
T  14038700 aacagcaacacatgcagtatacaaaaacaacatggcataataatatcaaatgcaagtcaacaacatctcaattatacattcatatttcaagtaatgcaca 14038799  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| ||||| || |||  |||||||||||||||    
T  14038800 taacattatatcacatcataatcaacatcaacacatgttaaacagcttcacagatta 14038856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 153
Target Start/End: Complemental strand, 17048055 - 17047989
Alignment:
Q  88 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacag 153  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  |||||||||||    
T  17048055 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacag 17047989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 43256227 - 43256161
Alignment:
Q  5 aacagcaacataggcagtatac-aacagcatgacataattatatcaaattcaattcatcaacatctt 70  Q
    ||||||||||||||||| |||| |||| ||||||||||| ||||||| ||||||||| |||||||||    
T  43256227 aacagcaacataggcagcataccaacaacatgacataataatatcaatttcaattcaacaacatctt 43256161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 15125036 - 15124967
Alignment:
Q  189 cccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    |||| ||||||| ||||||  |||| |||||||||| |||| | | ||||||||||||||||||||||||    
T  15125036 cccaggggtccaactctaaacaaattatgcgacacatatcgaaatatcctcacttgcactcagttctgga 15124967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 13923 - 13853
Alignment:
Q  1 aacaaacagcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 69  Q
    ||||||||||||||||||||||||  | |||| ||||| ||||  ||||||||| ||| ||||||||||||    
T  13923 aacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 13853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 16356881 - 16356766
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||| ||||| ||||||| ||||| | || ||||||||| | ||||| || | |||||| ||||||||||   | || |||    
T  16356881 cagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaact 16356782  T
Q  243 tgcactcagttctgga 258  Q
    |||| |||||||||||    
T  16356781 tgcattcagttctgga 16356766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 52873436 - 52873367
Alignment:
Q  5 aacagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatctta 71  Q
    ||||||||||||||||||||||   |||||||||||||||| ||||||| | ||| ||| || |||||||    
T  52873436 aacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatctta 52873367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 258
Target Start/End: Complemental strand, 16348592 - 16348478
Alignment:
Q  144 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcactt 243  Q
    ||||||||||||| ||  |||| ||||| ||||||| ||||| | || ||||||||| | ||||| || | |||||| ||||||||||   | || ||||    
T  16348592 agcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaactt 16348493  T
Q  244 gcactcagttctgga 258  Q
    ||| |||||||||||    
T  16348492 gcattcagttctgga 16348478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 258
Target Start/End: Complemental strand, 16488005 - 16487891
Alignment:
Q  144 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcactt 243  Q
    ||||||||||||  ||| |||| ||||| ||||| | ||||| | || ||||||||||| | ||| || | |||||| ||||||||||   |||| ||||    
T  16488005 agcttcacagatctcaattaacatcttaaataggacacattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaactt 16487906  T
Q  244 gcactcagttctgga 258  Q
    ||| |||||||||||    
T  16487905 gcattcagttctgga 16487891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 7893758 - 7893908
Alignment:
Q  8 agcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 103  Q
    |||||||||||||||||||   |||||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||| | |     
T  7893758 agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacatac 7893857  T
Q  104 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||  ||| |||||||   || ||||| ||||||  |||||||||||||||    
T  7893858 cattatttcacatcataat---cagcaacacatcttaaacagcttcacagatta 7893908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 54798823 - 54798756
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatct 69  Q
    |||||||||| | |||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||    
T  54798823 aacagcaacacaagcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 54798756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 4 - 157
Target Start/End: Complemental strand, 1118 - 965
Alignment:
Q  4 aaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa 103  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  1118 aaacatcaacataggcagtatacaacatcatgacataattatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaa 1019  T
Q  104 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||||||||||||    
T  1018 cattataacacatcataatcaacaacaacatattttatacagcttcacagatta 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 1e-59; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16920702 - 16920546
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    ||||||||||| |||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||    
T  16920702 aacaaacagcagcataggcagtatacaacatcatgacataagtatatcaaattccattcatcaacatcttatgtatacaaatattcttcaagtaatgcat 16920603  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  16920602 aaacattataccacatcataatcaacaacaacttatcttattcagcttcatagatta 16920546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 22831552 - 22831710
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatctta--tgcatacaaacattcttcaagtaatgc 98  Q
    |||||||||||||||||||| | | ||||  ||||||||||| ||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  22831552 aacaaacagcaacataggcactgttcaacgacatgacataatcatatcaaattcaattcatcaacatcttagatgtatacaaacattcttcaagtaatgc 22831651  T
Q  99 ataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22831652 ataaacattataacacatcataatcaacaacaacatatcttattcagcttcacagatta 22831710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 11185554 - 11185711
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    |||||||| ||||||  ||||| ||||||| |||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  11185554 aacaaacaacaacatgtgcagtgtacaacaacatgacataattatatcaaattcaattcatcagcatcttttgtatacaaacattcttcaagtaatgcat 11185653  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattac 158  Q
    |||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  11185654 aaactttataacacttcataatcagcaacaacatatcttattcatcttcacagattac 11185711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 35245635 - 35245758
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  35245635 aacaaacaccaacataggcagtatacaacaacatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcat 35245734  T
Q  101 aaacattataacacttcataatca 124  Q
    || ||||||| ||| |||||||||    
T  35245735 aatcattatatcacatcataatca 35245758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 19873313 - 19873428
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||||||||||||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||||| | |||| |||    
T  19873313 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaataaaatgatgcgacacagatcgcaatatccttact 19873412  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  19873413 tgcactcagttctgga 19873428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 20361029 - 20360873
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||| ||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| |||||||||||||||||||    
T  20361029 aacagcaacataggcagcatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcata 20360930  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||||||||| ||||||  |||||||||| ||||    
T  20360929 taacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatatta 20360873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 19863171 - 19863286
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||||||||||||||||||||||| | |||||||||||||||||||| |||| ||| ||||||||||||| | |||| |||    
T  19863171 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaatgatgtgacacagatcgcaatatccttact 19863270  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  19863271 tgcactcagttctgga 19863286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 87 - 258
Target Start/End: Complemental strand, 25642168 - 25641996
Alignment:
Q  87 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 184  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  || ||||| ||||| ||  |||||||||||||||||||||||    
T  25642168 ttcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataa-caacttcaaagattgcagttaacttcttatataggtctcatt 25642070  T
Q  185 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    | | |||||||||||||||||||| |||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  25642069 actacccaagggtccatctctaatcaaattatgcgacacagttcgcaatatcctcacttgcactcagttctgga 25641996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 20638352 - 20638196
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||| |||||||||||||||||||   || ||||||||||| ||||||| | ||||| |||||||||||    || ||||||||||||||||||||||||    
T  20638352 aacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaatttatcaacatctttaatattcaaacattcttcaagtaatgcata 20638253  T
Q  102 aa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    || | ||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  20638252 aaacgttatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 20638196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 100 - 258
Target Start/End: Original strand, 22438951 - 22439108
Alignment:
Q  100 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtcc 199  Q
    ||||| ||||| ||| ||||||||||||  ||||| || ||  |||||||||||||| ||  ||||||||||||||| |||||||| | |||||||||||    
T  22438951 taaactttatatcacatcataatcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatatagatctcattactacccaagggtcc 22439049  T
Q  200 atctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    ||||| |||  ||| ||||||||||||||||| | | ||||||||||||||||| ||||    
T  22439050 atctcaaatcgaattatgcgacacagatcgcaatattctcacttgcactcagttgtgga 22439108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 22334819 - 22334704
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||| ||||||| ||  |||||||||||||||||||||||  | |||| ||||||| ||||||| |||| ||||||||||||||||| | ||||||||    
T  22334819 cagctttacagattgcagttaacttcttatataggtctcattgctacccaggggtccaactctaatcaaattatgcgacacagatcgcaatatcctcact 22334720  T
Q  243 tgcactcagttctgga 258  Q
    |||| |||||||||||    
T  22334719 tgcattcagttctgga 22334704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 22432443 - 22432558
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    ||||||||||||||  |  |||||||||||||||||||||||| | |||||||||||||||| ||| |||| ||| ||||||||||||| | | || |||    
T  22432443 cagcttcacagattgtagttaacttcttatataggtctcattactacccaagggtccatctcaaatcaaataatgagacacagatcgcaatatactaact 22432542  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  22432543 tgcactcagttctgga 22432558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 29060592 - 29060748
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   || ||||||||||| ||||||||| ||| ||| |||||||| | | |||||  |||  ||||||||||||| |    
T  29060592 aacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattcataattcaagtaatgcaca 29060691  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| | | |||||||||||| ||||| ||||||  |||||||||||||||    
T  29060692 taacattatatctcatcataatcaacatcaacacatcttaaacagcttcacagatta 29060748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 20593824 - 20593981
Alignment:
Q  4 aaacagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    ||||||||||| | |||||||||   |||||||||||||||| ||||||||| ||| ||| |||||||| |   |||||| |||   ||||||||||| |    
T  20593824 aaacagcaacacatgcagtatacgaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacaatcataaatcaagtaatgcgt 20593923  T
Q  101 a-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    | |||| |||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  20593924 ataacaatatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 20593981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 25629399 - 25629268
Alignment:
Q  27 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 125  Q
    |||||||||||||||  ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || ||||||||| ||| ||||||||||    
T  25629399 aacagcatgacataacaatatcaaatgcaagtcaacaacatctcaattatacattcataattcaagtaatgcgtataacattatatcacatcataatcaa 25629300  T
Q  126 caacaacatatcttattcagcttcacagatta 157  Q
    || ||||| ||||||  |||||||||||||||    
T  25629299 catcaacacatcttaaacagcttcacagatta 25629268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 258
Target Start/End: Complemental strand, 15041596 - 15041363
Alignment:
Q  25 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaa-acattcttcaagtaatgcataaacattataacacttcataatc 123  Q
    ||||||||||||||| || ||||||||| |||||||  ||||||||| | || ||| | | ||| ||||||||||| | |||||| | ||  || ||||     
T  15041596 acaacagcatgacattataatatcaaatgcaattcaataacatcttaagtattcaataaaatct-caagtaatgcacatacattaaaccaaatcttaatt 15041498  T
Q  124 aacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacac 223  Q
    | || ||||| ||||||  |||||| |||||||  |  |||| || |   |||||||||||| | |||| ||||||||||||||| ||| ||||||| ||    
T  15041497 atcatcaacacatcttaaacagctttacagattgtatctaacatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatac 15041398  T
Q  224 agatcgcattttcctcacttgcactcagttctgga 258  Q
    ||||||| ||   |||||||||||||| |||||||    
T  15041397 agatcgcgttaaactcacttgcactcaattctgga 15041363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 18409896 - 18409740
Alignment:
Q  5 aacagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||||||||| |||||||||||   |||| ||||||||||| ||||||||| ||| ||| |||||||| |  ||| ||  |||  ||||| |||| ||||    
T  18409896 aacagcaacacaggcagtatacgaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaatcatccattcataattcaaataatacata 18409797  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||| ||||    
T  18409796 taacattatatcacatcataatcaacatcaacacatcttaaacagcttcacatatta 18409740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 16924776 - 16924692
Alignment:
Q  174 taggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    |||||||||||| | |||| |||||||   ||||| ||| ||||||||||||||||||||   ||||||||||||||||||||||    
T  16924776 taggtctcattactacccaggggtccactcctaatcaaagcatgcgacacagatcgcattaaactcacttgcactcagttctgga 16924692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 31164744 - 31164660
Alignment:
Q  174 taggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    ||||||||| || | |||| ||||||||||||||| ||| |||||||||||| |||||||   |||||||||||||| |||||||    
T  31164744 taggtctcactactacccaggggtccatctctaatcaaaacatgcgacacaggtcgcattaaactcacttgcactcaattctgga 31164660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 15894357 - 15894242
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    ||||||||||||||  |  |||| || |||||||||| ||||| | |||||||||||||||||||  || | |||||||||||  ||||   | ||||||    
T  15894357 cagcttcacagattgtagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggacgcaaagttctcact 15894258  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  15894257 tgcactcagttctgga 15894242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 16496296 - 16496365
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatctta 71  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||    
T  16496296 aacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 16496365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 18907299 - 18907414
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||| ||| ||  |||| ||||| ||||||| ||||| | || ||||||||||| ||||| || |||||||||||||||||||   | |||| |    
T  18907299 cagcttcacatattgcagttaacatcttaaataggtcacattactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacattctcatt 18907398  T
Q  243 tgcactcagttctgga 258  Q
    ||||||| ||||||||    
T  18907399 tgcactctgttctgga 18907414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 27416008 - 27415942
Alignment:
Q  5 aacagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 70  Q
    ||||||||||||||||| |||||| ||||||||||||||  |||||| ||||||||| |||||||||    
T  27416008 aacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatctt 27415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 19303609 - 19303454
Alignment:
Q  5 aacagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata- 101  Q
    |||| ||||| ||| |||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  ||||||||||| | |     
T  19303609 aacaacaacacaggaagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaattatacattcatatttcaagtaatgtacat 19303510  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||| ||| |||||||||||| ||||| |||||   |||||||||||||||    
T  19303509 aacattatatcacatcataatcaacatcaacacatcttcaacagcttcacagatta 19303454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 21739950 - 21739835
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||| |||| || |||||||||| ||||| | || ||| ||||||| ||||  || ||||| |||||||||||||   | |||| |    
T  21739950 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaactcatgtgacacagatcgcaacattctcaat 21739851  T
Q  243 tgcactcagttctgga 258  Q
    || |||||||||||||    
T  21739850 tgtactcagttctgga 21739835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 22780290 - 22780140
Alignment:
Q  11 aacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacat 106  Q
    |||||||||| |||||||   |||| ||||||||| ||||||| | ||| ||| || |||||||   || |||  || ||||||||||||||   |||||    
T  22780290 aacataggcaatatacaaaaacagcttgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacgcaacat 22780191  T
Q  107 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  22780190 tatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 22780140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 20076752 - 20076817
Alignment:
Q  5 aacagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatctta 71  Q
    ||||||||||||||||||| ||||  |||||||||||||| ||||||||| |||   ||||||||||||    
T  20076752 aacagcaacataggcagtaaacaaaacagcatgacataataatatcaaatgcaa---atcaacatctta 20076817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 21834818 - 21834703
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||| ||||| |||||||  |||| | |  ||||||||||| ||||| || | |||||| ||||||||||   |||| |||    
T  21834818 cagcttcacagatttcagttaacatcttaaataggtcagattactactgaagggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaact 21834719  T
Q  243 tgcactcagttctgga 258  Q
    |||| |||||||||||    
T  21834718 tgcattcagttctgga 21834703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 17287865 - 17287713
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||||||||||||| |||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||| |    
T  17287865 aacagcaacataggtagtatacaaacacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcaca 17287766  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacag 153  Q
     ||||||||  ||   ||||||||||  ||||| ||||||  |||||||||||    
T  17287765 taacattatgtcataacataatcaacctcaacacatcttaaacagcttcacag 17287713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 1e-59; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 37723952 - 37724210
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgca- 99  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |  ||| ||  |||  |||||||||||||     
T  37723952 aacagacagcaacataggcagtatacaacagcatgacatgattatatcaaattaaattcatcaacatctcaatcattcattcataattcaagtaatgcaa 37724051  T
Q  100 -taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtc 198  Q
     ||||||||||| ||| ||||| ||||||  ||||| ||  |  |||||||||||||| ||  ||||||||||||||||||||| || | || |||||||    
T  37724052 ttaaacattatatcacatcatattcaacactaacatctcaaaa-cagcttcacagattgcagttaacttcttatataggtctcaatactaccgaagggtc 37724150  T
Q  199 catctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    |||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  37724151 catctctaatcaaattatgcgacacagatcgcaatctcctcacttgcactcagttctgga 37724210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 50 - 258
Target Start/End: Original strand, 22032415 - 22032622
Alignment:
Q  50 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 149  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || ||||| ||||||  ||||| || || ||||||||    
T  22032415 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcgta-tcagcttc 22032513  T
Q  150 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 249  Q
    ||||||| ||  |||||||||||||||||||||||| | || ||||||||||||||||| || ||| || ||||| ||| ||   | |||||||||||||    
T  22032514 acagattgcagttaacttcttatataggtctcattactacctaagggtccatctctaatcaattcaagcaacacatatcacaacattctcacttgcactc 22032613  T
Q  250 agttctgga 258  Q
    |||||||||    
T  22032614 agttctgga 22032622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 258
Target Start/End: Complemental strand, 18770024 - 18769817
Alignment:
Q  50 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 149  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || ||||| ||||||  ||||| || || ||||||||    
T  18770024 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacacaaacatctcata-tcagcttc 18769926  T
Q  150 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 249  Q
    ||||||| ||  |||||||||||||||||||||||| | || ||||||||||| ||||| || ||| || ||||||||| |    | ||||||||| |||    
T  18769925 acagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcactacattctcacttgcgctc 18769826  T
Q  250 agttctgga 258  Q
    |||||||||    
T  18769825 agttctgga 18769817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 21293038 - 21292883
Alignment:
Q  5 aacagcaacataggcagtatacaa-cagcatgacataattatatcaa-attcaa-ttcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||||| |||||| ||||||||||||||| | ||||||  |||||||||||||||||||    
T  21293038 aacagcaacataggcagtaaacaaacagtatgacataataatatcaatattcaaattcatcaacatcttaggtatacaattattcttcaagtaatgcata 21292939  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||| ||| ||||||||| |||||||||||||||| || ||||||||||||    
T  21292938 aacattatatcacatcataatcatcaacaacatatcttatacaacttcacagatta 21292883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 258
Target Start/End: Original strand, 23572178 - 23572385
Alignment:
Q  50 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 149  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || |||||||||||   ||||| || || ||| ||||    
T  23572178 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactcaaacatctcata-tcaacttc 23572276  T
Q  150 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 249  Q
    ||| ||| ||  |||||||||||||||||||||||| | || ||||||||||| ||||| || ||| || ||  ||||| ||   | |||||||||||||    
T  23572277 acaaattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacttagatcacaacattctcacttgcactc 23572376  T
Q  250 agttctgga 258  Q
    |||||||||    
T  23572377 agttctgga 23572385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 26704257 - 26704372
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||||||||||||| ||||||||| | |||||||||||||| ||||| ||||||||||||||||||| ||||||||| |||    
T  26704257 cagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttact 26704356  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  26704357 tgcactcagttctgga 26704372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 26973990 - 26974105
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||||||||||||| ||||||||| | |||||||||||||| ||||| ||||||||||||||||||| ||||||||| |||    
T  26973990 cagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttact 26974089  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  26974090 tgcactcagttctgga 26974105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 8286912 - 8286760
Alignment:
Q  5 aacagcaacataggcagtatacaa----cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    ||||||||||||||||||||||||    |||||||||||||| ||||||| | ||||||||||||||||||   |  ||||||||||||||||||||||     
T  8286912 aacagcaacataggcagtatacaaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaataatcaaacattcttcaagtaatgcac 8286813  T
Q  101 a-aacattataacacttcataatcaacaacaacatatcttattcagcttcaca 152  Q
    | ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||    
T  8286812 ataacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca 8286760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 256
Target Start/End: Original strand, 21873387 - 21873553
Alignment:
Q  90 aagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattg 188  Q
    |||||||||| | ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||||| ||||| |     
T  21873387 aagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcacattacta 21873485  T
Q  189 cccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctg 256  Q
    ||||||||| |||||||||| |||| |||||||||||||| || | |||| |||||||||||||||||    
T  21873486 cccaagggttcatctctaatcaaattatgcgacacagatctcaatatcctaacttgcactcagttctg 21873553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 23501273 - 23501158
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||| |||||||||||||||||||||||| | |||||||||||||||||||| || | || ||||||||||||||   | ||||||    
T  23501273 cagcttcacagattgcaattaacttcttatataggtctcattactacccaagggtccatctctaatcaacttatacgacacagatcgcaacattctcact 23501174  T
Q  243 tgcactcagttctgga 258  Q
    | ||||||||||||||    
T  23501173 ttcactcagttctgga 23501158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 23390565 - 23390409
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||| ||||||||||   || ||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| |    
T  23390565 aacagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcaca 23390466  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| ||||| ||||||   ||||||||||||||    
T  23390465 taacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagatta 23390409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 143 - 255
Target Start/End: Original strand, 23201559 - 23201672
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgccc-aagggtccatctctaattaaatcatgcgacacagatcgcattttcctcac 241  Q
    |||||||||||||| ||  ||||||||| |||||||||||||| | ||| ||||||||||||||||  |||| ||||||||||||||||| | |||||||    
T  23201559 cagcttcacagattgcagttaacttcttctataggtctcattactaccccaagggtccatctctaaacaaattatgcgacacagatcgcaatatcctcac 23201658  T
Q  242 ttgcactcagttct 255  Q
    ||||||||||||||    
T  23201659 ttgcactcagttct 23201672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 255
Target Start/End: Original strand, 14079340 - 14079451
Alignment:
Q  144 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcactt 243  Q
    ||||||||||||| ||  |||||||||| ||||||| ||||| | |||| ||||||||||||||| |||| |||||||||||||||||   |||||||||    
T  14079340 agcttcacagattgcagttaacttcttaaataggtcacattactacccaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcactt 14079439  T
Q  244 gcactcagttct 255  Q
    ||||||||||||    
T  14079440 gcactcagttct 14079451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 24493624 - 24493776
Alignment:
Q  8 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 104  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || |||||||| ||||| | |||    
T  24493624 agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtgatgcacataac 24493723  T
Q  105 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||| ||| |||||||||||| ||||||||||||   ||||||||||||||    
T  24493724 attatatcacatcataatcaacatcaacatatcttaaatagcttcacagatta 24493776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 22075071 - 22075240
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||||||||||||| |||||||||   || ||||||||||| ||||||| | ||||||| ||||||||||   || |||| | |  ||||||||||||||    
T  22075071 aacagcaacataggaagtatacaaaatcaacatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataattctcaagtaatgcata 22075170  T
Q  102 aa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 170  Q
    || ||||||| ||| |||||||||||||||||| ||||||  |||||||||| |||| || |||| ||||    
T  22075171 aaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacatattataattaacctctt 22075240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 9078004 - 9078160
Alignment:
Q  5 aacagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||   |||||||||||||||| ||||||| | ||| ||| |||||||| |   |||||  |||   ||||||||||| ||    
T  9078004 aacagcaacataggcagtatacgaaaacagcatgacataataatatcaagtgcaagtcaacaacatctcaattatacattcataactcaagtaatgcgta 9078103  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  9078104 taacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 9078160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 24529272 - 24529428
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||| |||||||||||||||||||   || ||||||||||| ||||||||| ||| ||| ||||||||||   |||||  |||   ||||||||||| ||    
T  24529272 aacaacaacataggcagtatacaaaaacaacatgacataatgatatcaaatgcaagtcaacaacatcttaattatacattcatatctcaagtaatgctta 24529371  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| ||||| |||||| ||||| ||||||  |||||||||||||||    
T  24529372 taacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagatta 24529428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 25431446 - 25431602
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   || ||||||||||| ||||||| | ||| ||| ||||||||||    | |||  || |||||||||||||| |    
T  25431446 aacagcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatgttcaattatacttcaagtaatgcaca 25431545  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| ||||  ||||||  |||||||||||||||    
T  25431546 taacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagatta 25431602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 258
Target Start/End: Original strand, 23512318 - 23512413
Alignment:
Q  163 aacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    |||||||||||||||||  | || | |||||||||||| ||||||| |||| |||||||||||||||||   |||| || ||||||||||||||||    
T  23512318 aacttcttatataggtcataatactacccaagggtccacctctaatcaaattatgcgacacagatcgcaacatcctaacatgcactcagttctgga 23512413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 25421584 - 25421740
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||| |||||||||||||||||||   || ||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||| |    
T  25421584 aacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaagtcaacagcatcttaaatattcaattatacttcaagtaatgcaca 25421683  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| ||||  ||||||  |||||||||||||||    
T  25421684 taacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacagatta 25421740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 13025366 - 13025518
Alignment:
Q  8 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 104  Q
    |||||||||||||||||||||  |||||||||||| | ||||||||| ||| ||| ||||||||||   || |||  || |||||| ||||| | | |||    
T  13025366 agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaaataatgtacataac 13025465  T
Q  105 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||| ||| || ||||||||| ||||||||||||  || ||||||| ||||    
T  13025466 attatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatatta 13025518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 13095550 - 13095702
Alignment:
Q  8 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 104  Q
    |||||||||||||||||||||  |||||||||||| | ||||||||| ||| ||| ||||||||||   || |||  || |||||| ||||| | | |||    
T  13095550 agcaacataggcagtatacaaaacagcatgacatattgatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaaataatgtacataac 13095649  T
Q  105 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||| ||| || ||||||||| ||||||||||||  || ||||||| ||||    
T  13095650 attatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatatta 13095702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 21729133 - 21729064
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatctta 71  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||    
T  21729133 aacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 21729064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 21808458 - 21808389
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatctta 71  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||| ||||||||||    
T  21808458 aacagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatctta 21808389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 18356367 - 18356433
Alignment:
Q  5 aacagcaacataggcagtatac-aacagcatgacataattatatcaaattcaattcatcaacatctt 70  Q
    ||||||||||||||||| |||| |||||||||| ||||| ||||||| ||||||||| |||||||||    
T  18356367 aacagcaacataggcagcatacaaacagcatgatataataatatcaatttcaattcaacaacatctt 18356433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 20910866 - 20910800
Alignment:
Q  5 aacagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 70  Q
    ||||||||||||| ||| |||||| |||||||||||||| ||||||| ||||||||| |||||||||    
T  20910866 aacagcaacatagacagcatacaaacagcatgacataataatatcaatttcaattcaacaacatctt 20910800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 22107357 - 22107273
Alignment:
Q  87 ttcaagtaatgcataa-acattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 170  Q
    |||||||||||||||| | |||||| ||| |||||||||||||||||| | ||||  ||||||||||||||| || |||| ||||    
T  22107357 ttcaagtaatgcataatatattatatcacatcataatcaacaacaacacaccttaaacagcttcacagattataattaacctctt 22107273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 22412241 - 22412302
Alignment:
Q  10 caacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 69  Q
    |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||    
T  22412241 caacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 22412302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 1096544 - 1096668
Alignment:
Q  27 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 125  Q
    |||| ||| ||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  ||||||||||||||| ||||||||| ||| ||||||||||    
T  1096544 aacaacataacataataatatcaaatgcaaatcaacaacatctcacatatacattcataattcaagtaatgcatataacattatatcacatcataatcaa 1096643  T
Q  126 caacaacatatcttattcagcttca 150  Q
    || ||||  ||||||  ||||||||    
T  1096644 catcaacgcatcttaaacagcttca 1096668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 18418633 - 18418699
Alignment:
Q  5 aacagcaacataggcagtatac-aacagcatgacataattatatcaaattcaattcatcaacatctta 71  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||||  | ||||||| ||||||||||    
T  18418633 aacatcaacataggcagtatacaaacagcatgacataataatatcatttgcaattca-caacatctta 18418699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 20027013 - 20026942
Alignment:
Q  1 aacaaacagcaacataggcagtat--acaacag--catgacataattatatcaaattcaattcatcaacatc 68  Q
    ||||||||||||||||||||||||  | |||||  ||||| ||||| ||||||||| ||||||| |||||||    
T  20027013 aacaaacagcaacataggcagtatccaaaacagttcatgatataataatatcaaatgcaattcaacaacatc 20026942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 21997603 - 21997553
Alignment:
Q  5 aacagcaacataggcagtatac---aacagcatgacataattatatcaaat 52  Q
    ||||||||||||||||||||||   |||| ||||||||||| |||||||||    
T  21997603 aacagcaacataggcagtatacaaaaacaacatgacataataatatcaaat 21997553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 5200 - 5044
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    |||||||| ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  5200 aacaaacatcaacataggtattatacaacatcatgacataattatatcaaattcaattcatcaacatcttatgtatacaaacattcttcaagtaatgtat 5101  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||||| || |||||||||||||||||| |||||||| |||||| ||||    
T  5100 aaacattataacacatcttaatcaacaacaacatattttattcagtttcacatatta 5044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 26911 - 27129
Alignment:
Q  38 ataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatc 137  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||||||||  ||||| ||    
T  26911 ataattatatcaa-ttcaattcatcaacatcttatgtatacaaatattcttcaagtaatgcataaacattataatacatcataatcaacacaaacatctc 27009  T
Q  138 ttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcc 237  Q
     ||  |||||||||||||| ||  |||||||||||||| ||||||||| | |||||||||||||||||||  |||  || ||| |||||||||| | |||    
T  27010 ata-acagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatctctaaacaaaatattcgaaacagatcgcaatatcc 27108  T
Q  238 tcacttgcactcagttctgga 258  Q
    |||||||||||||||||||||    
T  27109 tcacttgcactcagttctgga 27129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 3e-57; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 38801460 - 38801304
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||  ||||||||||||||||||    
T  38801460 aacaaacagcaacataggcagtgtgcaacagcaagacataattatatcaaattcaattcatcaacatattatatatacaattattcttcaagtaatgcat 38801361  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  38801360 aaacattataacacatcgtaatcaacaacaacatatcttattcagcttcacaaatta 38801304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 87 - 258
Target Start/End: Original strand, 21714684 - 21714856
Alignment:
Q  87 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 184  Q
    |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||||||||||    
T  21714684 ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatataggtctcatt 21714782  T
Q  185 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    | | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21714783 actacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 21714856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 88 - 255
Target Start/End: Original strand, 48603652 - 48603820
Alignment:
Q  88 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattat 186  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||||||||||||||||| || ||     
T  48603652 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatac 48603751  T
Q  187 tgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttct 255  Q
    | || | ||||||||||||||| || |||||| ||||||||||||   |||| ||||||||||||||||    
T  48603752 tacctaggggtccatctctaatcaattcatgcaacacagatcgcaacatcctaacttgcactcagttct 48603820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 27250795 - 27250629
Alignment:
Q  8 agcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat-aaa 103  Q
    |||||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||| |||||||||||||| |||    
T  27250795 agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgcataaaa 27250696  T
Q  104 cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 170  Q
    ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||| ||||    
T  27250695 cattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 27250629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 20091401 - 20091286
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||||||||| ||||||||||||| | |||||||||||||||| ||| |||| ||||||||||||||||| | |||||| |    
T  20091401 cagcttcacagattgcagttaacttcttaaataggtctcattactacccaagggtccatctcaaatcaaattatgcgacacagatcgcaatatcctcatt 20091302  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  20091301 tgcactcagttctgga 20091286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 42865139 - 42865024
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| | |||||||||||||||||||| |||| |||||||||||||||||   ||||||||    
T  42865139 cagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcact 42865040  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  42865039 tgcactcagttctgga 42865024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 22354616 - 22354485
Alignment:
Q  27 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 125  Q
    |||||||||||||||  ||||||| | ||||||||||||||||||   || |||| ||||||||||||||| ||| ||||||||| ||| ||||||||||    
T  22354616 aacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgtatataacattatatcacatcataatcaa 22354517  T
Q  126 caacaacatatcttattcagcttcacagatta 157  Q
    || ||||| ||||||  |||||||||||||||    
T  22354516 catcaacacatcttaaacagcttcacagatta 22354485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 21026732 - 21026901
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||||||| |||||||||||||||   ||||||||| ||| |||||||| | ||||||| ||||||||||   || |||| | |  ||||||||||||||    
T  21026732 aacagcaatataggcagtatacaaaatcagcatgacgtaaatatatcaattgcaattcaacaacatcttaaatattcaaataattctcaagtaatgcata 21026831  T
Q  102 aa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 170  Q
    || ||||||| ||| |||||||||||| ||||| ||||||  ||||||||||||||| || |||| ||||    
T  21026832 aaacattatatcacatcataatcaacagcaacacatcttaaacagcttcacagattataattaacctctt 21026901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 258
Target Start/End: Complemental strand, 22468742 - 22468509
Alignment:
Q  25 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatc 123  Q
    ||||||||||||||| || ||||||| | ||||||| ||||||||||   || |||  ||   |||||||||||| | ||||||||| ||| |||||||     
T  22468742 acaacagcatgacatcataatatcaattgcaattcaacaacatcttaattattcaataatatctcaagtaatgcacataacattatatcacatcataatt 22468643  T
Q  124 aacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacac 223  Q
    | || || || ||||||  ||||||||||||||| || || |  |||  | |||||||| || | ||||||||||||||||||||  ||| |||||||||    
T  22468642 a-catcagcacatcttaaacagcttcacagattataattaccaacttcaaaaggtctcaatactacccaagggtccatctctaatcgaattatgcgacac 22468544  T
Q  224 agatcgcattttcctcacttgcactcagttctgga 258  Q
    | |||||| |  |||||||||||||||||||||||    
T  22468543 atatcgcaataccctcacttgcactcagttctgga 22468509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 50210282 - 50210126
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   || ||||||||||| ||||||||| ||| ||| |||||||| | | |||||  |||  |||||||||||| |     
T  50210282 aacagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattcataattcaagtaatgcgtt 50210183  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  50210182 taacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 50210126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 256
Target Start/End: Complemental strand, 21788088 - 21787857
Alignment:
Q  25 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacat-tcttcaagtaatgcata-aacattataacacttcataat 122  Q
    ||||||||||||| |  | ||||||| |||| |||| ||||||||||  ||| |||  || |||| |||||||||| | |||||||||  || |||||||    
T  21788088 acaacagcatgacttcgtaatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacattatataacatcataat 21787990  T
Q  123 caacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgaca 222  Q
    ||||| |||||| || ||  ||||| || ||||| ||  |||||||||||||||||  ||||| | |||||||||||||||||||  || | ||||||||    
T  21787989 caacatcaacatttcataa-cagctgcatagattgcagttaacttcttatataggttacattactacccaagggtccatctctaaacaagttatgcgaca 21787891  T
Q  223 cagatcgcattttcctcacttgcactcagttctg 256  Q
    ||| |||||  || ||||||||||||||||||||    
T  21787890 caggtcgcaaatttctcacttgcactcagttctg 21787857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 22532321 - 22532473
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||| | | ||||||| ||||||||||   || ||  |||  ||||||||||||| |    
T  22532321 aacagcaacataggcagtatacaaaaacagcatgacataataatatccattgcaattcaacaacatcttaaatattcattcataattcaagtaatgcaca 22532420  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacag 153  Q
     ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||    
T  22532421 taacattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 22532473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 34509832 - 34509988
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||||   |||||  |||   ||||||||||| ||    
T  34509832 aacagcaacataggcagtatacaaaaacagcatgacataatgatatcaaatgcaagtcaacaacatcttaattatacattcatatctcaagtaatgctta 34509931  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| ||||| |||||| ||||| ||||||  |||||||| ||||||    
T  34509932 taacattatatcacatcatattcaacatcaacacatcttaaacagcttcaaagatta 34509988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 6152046 - 6152161
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||| |||| || |||||||||| ||||| | || ||| ||||||| ||||| || |||||||||||||||||||   |||| ||     
T  6152046 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgcaacatcctaaca 6152145  T
Q  243 tgcactcagttctgga 258  Q
    |||| |||||||||||    
T  6152146 tgcattcagttctgga 6152161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 20135262 - 20135395
Alignment:
Q  25 acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatc 123  Q
    |||||| ||||||||||| ||||||  | ||||||| |||||||||| | || |||  |  |||||||||||||||| ||||||||| ||  |||||||     
T  20135262 acaacatcatgacataataatatcatgtgcaattcaacaacatcttaagtattcaataaaacttcaagtaatgcatacaacattatatcatatcataatg 20135361  T
Q  124 aacaacaacatatcttattcagcttcacagatta 157  Q
    |||| ||||| ||||||  |||||||||||||||    
T  20135362 aacatcaacacatcttaaacagcttcacagatta 20135395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 18182049 - 18181934
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    ||||||||||| || ||  |||||||||||| | ||| ||||| | || ||| ||||||| ||||| || | |||||||||||||||||   |||| |||    
T  18182049 cagcttcacagtttgcagttaacttcttatacaagtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaact 18181950  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  18181949 tgcactcagttctgga 18181934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21896328 - 21896258
Alignment:
Q  1 aacaaacagcaacataggcagtatac--aacagcatgacataattatatcaaattcaattcatcaacatct 69  Q
    ||||||||||||||||||||||||||  |||||||||| ||||  ||||||||| ||| ||||||||||||    
T  21896328 aacaaacagcaacataggcagtatacaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 21896258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 254
Target Start/End: Complemental strand, 22831306 - 22831195
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||| |||| || |||||||||| ||||| | || ||| ||||||| ||||  || |||||||||||||||||||   | |||| |    
T  22831306 cagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaagtcatgcgacacagatcgcaacattctcaat 22831207  T
Q  243 tgcactcagttc 254  Q
    ||||||||||||    
T  22831206 tgcactcagttc 22831195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21861642 - 21861572
Alignment:
Q  1 aacaaacagcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 69  Q
    ||||||||||||||||||||||||  | |||||||||| ||||  ||||||||| ||| ||||||||||||    
T  21861642 aacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 21861572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 33797573 - 33797639
Alignment:
Q  5 aacagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 70  Q
    |||||||||||| |||| |||||| || ||||||||||| ||||||| ||||||||| |||||||||    
T  33797573 aacagcaacatatgcagcatacaaacaacatgacataataatatcaatttcaattcaacaacatctt 33797639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 22356168 - 22356087
Alignment:
Q  78 caaacattcttcaagtaatgcata-aacattataacacttcataatcaa-caacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||||||||||||| | ||||||||| ||| |||||||||| || ||||| ||||||   ||||||||||||||    
T  22356168 caaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagatta 22356087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 22357854 - 22357773
Alignment:
Q  78 caaacattcttcaagtaatgcata-aacattataacacttcataatcaa-caacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||||||||||||| | ||||||||| ||| |||||||||| || ||||| ||||||   ||||||||||||||    
T  22357854 caaacattcttcaagtaatgcacataacattatatcacatcataatcaatcatcaacacatcttaaatagcttcacagatta 22357773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 21022830 - 21022914
Alignment:
Q  144 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatc 228  Q
    ||||||||||||| ||  |||| ||||||||||||| ||||| | || |||||||||||  |||| |||||| || |||||||||    
T  21022830 agcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccttaatcaaatcaagcaacacagatc 21022914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 35261150 - 35261051
Alignment:
Q  1 aacaaacagcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgc 98  Q
    ||||||||||||||||||||||||  | |||||||||| ||||  ||||||||| |||   |||||||||| |  ||| || ||||  ||||||||||||    
T  35261150 aacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaa---atcaacatctcaaacattcatacataattcaagtaatgc 35261054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 20847223 - 20847173
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaat 52  Q
    ||||||||||||||||||| ||||   ||||||||||||| ||||||||||    
T  20847223 aacagcaacataggcagtacacaaaatcagcatgacataaatatatcaaat 20847173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 10495 - 10339
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| | ||||||| ||||||||||||||||||    
T  10495 aacaaacagcaacataggcagtatacaacagcatgacataataatatcaatttcaattcaacaacatcttaagtatacaaatattcttcaagtaatgcat 10396  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    || ||||||| ||| ||||||||| |||| ||||||||||| |||||||||||||||    
T  10395 aatcattatatcacatcataatcatcaacgacatatcttatacagcttcacagatta 10339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 47044 - 47200
Alignment:
Q  1 aacaaacagcaacataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    |||||||| ||||||||||||| |||| |||||||||||||| ||||||| |||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  47044 aacaaacaacaacataggcagtttacagcagcatgacataataatatcaatttcaattcatcaacatcttatgtatacaaatattctccaagtaatgcat 47143  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||| ||| |||||| || |||||||||||||||| |||||||||||||||    
T  47144 aaacattatatcacatcataaacatcaacaacatatcttatacagcttcacagatta 47200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 13549 - 13703
Alignment:
Q  5 aacagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataa 102  Q
    ||||||||||||||||||||||||  || |||||||| || ||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  13549 aacagcaacataggcagtatacaaaacaacatgacatgataatatcaatttcgattcatcaacatcttatgtatacaaacattcttcaagtaatgcataa 13648  T
Q  103 acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||| ||| |||||||||||||| ||||||||||| |||||||||||||||    
T  13649 acattatatcacatcataatcaacaacgacatatcttatacagcttcacagatta 13703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 32119 - 32272
Alignment:
Q  5 aacagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa 103  Q
    ||||||||||||||||||| |||| || ||||||||||| ||||||| |||||||||||||||||||| | ||||||| |||||||||||||||||||||    
T  32119 aacagcaacataggcagtaaacaaacaacatgacataataatatcaatttcaattcatcaacatcttaggtatacaaatattcttcaagtaatgcataaa 32218  T
Q  104 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||| ||| |||||||||||||| ||||||||||| |||||||||||||||    
T  32219 cattatatcacatcataatcaacaacgacatatcttatacagcttcacagatta 32272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 15529 - 15378
Alignment:
Q  8 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaaca 105  Q
    |||||||||||||||||||||  || ||||||||||| ||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |    
T  15529 agcaacataggcagtatacaaaacaacatgacataataatatcaatttcaattcatcaacatcttatgtataaaaatattcttcaagtaatgcataaata 15430  T
Q  106 ttataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||| ||| ||||||||| |||||||||||||||| |||||||||||||||    
T  15429 ttatatcacatcataatcatcaacaacatatcttatacagcttcacagatta 15378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 7378 - 7546
Alignment:
Q  38 ataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatc 137  Q
    ||||||||| |||||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || ||||| |||||   ||||| ||    
T  7378 ataattata-caaattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcatattcaacgcaaacatctc 7476  T
Q  138 ttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaat 208  Q
     || |||| |||| ||||| ||  |||||||||||||||||||||||| | || ||||||||||| |||||    
T  7477 ata-tcagtttcatagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaat 7546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 4764 - 4919
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||| |||||||||||||||||||   ||||||||||||| || ||||| | ||||||||||| |||||||| ||||||| ||||||||||||| |||||    
T  4764 aacaacaacataggcagtatacaaaaacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaaatattcttcaagtaaggcata 4863  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||| ||| |||||||||||||||||||||||||| || ||||||||||||    
T  4864 aacattatatcacatcataatcaacaacaacatatcttatacaacttcacagatta 4919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 13 - 143
Alignment:
Q  27 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaac 126  Q
    ||||||||||||||| || ||||| | ||||||||||| |||||||| ||||||| ||||||||||||| |||||||||||||| ||| |||||||||||    
T  13 aacagcatgacataaatacatcaattgcaattcatcaaaatcttatgtatacaaatattcttcaagtaaggcataaacattatatcacatcataatcaac 112  T
Q  127 aacaacatatcttattcagcttcacagatta 157  Q
    ||||||||||||||| || ||||||||||||    
T  113 aacaacatatcttatacaacttcacagatta 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 87 - 258
Target Start/End: Original strand, 69930 - 70102
Alignment:
Q  87 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 184  Q
    |||||||||||||  ||| ||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||||||||||||||||    
T  69930 ttcaagtaatgcaattaatcattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttatataggtctcatt 70028  T
Q  185 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    | | |||||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  70029 actacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgga 70102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 50 - 255
Target Start/End: Original strand, 1975 - 2179
Alignment:
Q  50 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 149  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| || |||||  ||||   ||||| || || ||||||||    
T  1975 aattcaattcatcaacatcttatgtatacaattattcttcaagtaatgcataaacattataatacatcatatccaacgcaaacatctcata-tcagcttc 2073  T
Q  150 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 249  Q
    ||||||| ||  |||||||||||||||||||||||| | || ||||||||||| ||||| || ||| || |||||||||  |   | |||||||||||||    
T  2074 acagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcataacattctcacttgcactc 2173  T
Q  250 agttct 255  Q
    ||||||    
T  2174 agttct 2179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 258
Target Start/End: Complemental strand, 21826 - 21619
Alignment:
Q  50 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 149  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || || |||||||||  ||||| || ||  |||||||    
T  21826 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttc 21728  T
Q  150 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 249  Q
    ||||||| ||  |||| ||||||||||||||||||| | || ||||||||||| ||||  || ||| || ||||||||| ||   | |||||||||||||    
T  21727 acagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactc 21628  T
Q  250 agttctgga 258  Q
    |||||||||    
T  21627 agttctgga 21619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 258
Target Start/End: Complemental strand, 29718 - 29511
Alignment:
Q  50 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 149  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || || |||||||||  ||||| || ||  |||||||    
T  29718 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcttaatcaacacaaacatctcata-acagcttc 29620  T
Q  150 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 249  Q
    ||||||| ||  |||| ||||||||||||||||||| | || ||||||||||| ||||  || ||| || ||||||||| ||   | |||||||||||||    
T  29619 acagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactc 29520  T
Q  250 agttctgga 258  Q
    |||||||||    
T  29519 agttctgga 29511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 255
Target Start/End: Original strand, 36592 - 36761
Alignment:
Q  87 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 184  Q
    |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||||| ||||||||||||    
T  36592 ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttcttaaataggtctcatt 36690  T
Q  185 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttct 255  Q
    | | ||||||||||| |||||||  |||||||||||||||||||| |||||||||||||||||||||||||    
T  36691 actacccaagggtccttctctaaacaaatcatgcgacacagatcgtattttcctcacttgcactcagttct 36761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 258
Target Start/End: Original strand, 20117 - 20289
Alignment:
Q  87 ttcaagtaatgca--taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcatt 184  Q
    |||||||||||||  ||||||||||| ||| ||||| ||||||  ||||| || ||  ||||||||||| || ||  |||||||||||||||||||||||    
T  20117 ttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataa-cagcttcacaggttgcagttaacttcttatataggtctcatt 20215  T
Q  185 attgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    | | |||||||||||||| ||||| ||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  20216 actacccaagggtccatccctaatcaaatcatgcgacacagattacattatcctcacttgcactcagttctgga 20289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 20698504 - 20698349
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   ||||||||| |||| ||||||| | |||||||||||||||||||  || |||| |||||||||||||||||||    
T  20698504 aacagcaacataggcagtatacaaaaacagcatgacgtaataatatcaattgcaattcatcaacatcttatatattcaaatattcttcaagtaatgcata 20698405  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||| ||| |||||||||||  ||||| |||||   |||||||||||||||    
T  20698404 aacattatatcacatcataatcaacttcaacacatcttgaacagcttcacagatta 20698349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 258
Target Start/End: Original strand, 856234 - 856441
Alignment:
Q  50 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 149  Q
    ||||||||||| |||||||||||| ||||||  | |||||||||||| |||||||||||||| || ||||| || |||  ||||| || |||  ||||||    
T  856234 aattcaattcaacaacatcttatgtatacaattaatcttcaagtaatacataaacattataatacatcatattcgacacaaacatctcatata-agcttc 856332  T
Q  150 acagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactc 249  Q
    ||||||| ||  |||||||||||||||||||||||| | || ||||||||||| ||||| || ||| || ||||||||| ||   | |||||||||||||    
T  856333 acagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactc 856432  T
Q  250 agttctgga 258  Q
    |||||||||    
T  856433 agttctgga 856441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 17525080 - 17524965
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| | |||||||||||||||||||| |||| ||||||||||||||||| | ||||||||    
T  17525080 cagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcact 17524981  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||| ||||    
T  17524980 tgcactcagttttgga 17524965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 12399261 - 12399417
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||||| ||||||| ||||||||||   || |||| | |  ||||||||||||||    
T  12399261 aacagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaaatattcaaataattctcaagtaatgcata 12399360  T
Q  102 a-acattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    | |||||||| ||| |||||||||||||||||| ||||||   ||||||||||||||    
T  12399361 agacattatatcacatcataatcaacaacaacacatcttaaatagcttcacagatta 12399417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 13442330 - 13442482
Alignment:
Q  9 gcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 104  Q
    ||||||||||||||||||||   || ||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| | |||    
T  13442330 gcaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcacataac 13442429  T
Q  105 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  13442430 attatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 13442482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 17487908 - 17488064
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||||||| |||| ||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| |||||||||||||||||||    
T  17487908 aacagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcata 17488007  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| ||||| ||||||  ||| |||||||||||    
T  17488008 taacattatatcacatcataatcaacatcaacacatcttaaacagattcacagatta 17488064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 207
Target Start/End: Original strand, 14179570 - 14179690
Alignment:
Q  88 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattat 186  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  ||||||||||||||| || |||||||||||||||||| || ||     
T  14179570 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatac 14179669  T
Q  187 tgcccaagggtccatctctaa 207  Q
    | |||| ||||||||||||||    
T  14179670 tacccaggggtccatctctaa 14179690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 14972906 - 14973062
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||||||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| |||||||| ||  |||||  |||  |||||||||||||||    
T  14972906 aacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacatctcatatatacattcataattcaagtaatgcata 14973005  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  14973006 taacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 14973062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 172 - 258
Target Start/End: Complemental strand, 15877727 - 15877641
Alignment:
Q  172 tataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    |||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||||| | ||||||||||||||||||||||||    
T  15877727 tataggtctcattactacccaagggtccatctctaatcaaattatgcgacactgatcgcaatatcctcacttgcactcagttctgga 15877641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 17499390 - 17499546
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||||||| |||| ||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| |||||||||||||||||||    
T  17499390 aacagcaaaatagacagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcata 17499489  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| ||| |||||||| ||||| ||||||  ||| |||||| ||||    
T  17499490 taacattatatcacatcaaaatcaacatcaacacatcttaaacagattcacaaatta 17499546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 100 - 258
Target Start/End: Original strand, 23408581 - 23408738
Alignment:
Q  100 taaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtcc 199  Q
    ||||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  |||||||| | ||||||  || || | |||||||||||    
T  23408581 taaacattatatcacatcatattcaacactaacatctcataa-cagcttcacagattgcagttaacttctaaaataggtaacaatactacccaagggtcc 23408679  T
Q  200 atctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    ||||||||| |||| ||||||||||||||||| | |||||||||||||| |||||||||    
T  23408680 atctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactaagttctgga 23408738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 14576901 - 14576746
Alignment:
Q  5 aacagcaacataggcagtata--caacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata- 101  Q
    ||||||||||||| |||||||  ||||||||||||||||| ||||||| | ||| ||| ||||||||||   || |||  || ||||||||||||||||     
T  14576901 aacagcaacatagacagtataaacaacagcatgacataataatatcaattgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgcatat 14576802  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||| ||| |||||||||||| ||||| ||||||  || ||||||||||||    
T  14576801 aacattatatcacatcataatcaacatcaacacatcttaaacaacttcacagatta 14576746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 18438586 - 18438742
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   |||||||| ||||| ||||||||| ||| ||| ||||||||| |  |||||  |||   ||||||||||||||    
T  18438586 aacagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaacaacatcttttttatacattcatatctcaagtaatgcata 18438685  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| ||||| |||||| ||||| ||||||  |||||||||||||||    
T  18438686 taacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagatta 18438742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 24153274 - 24153122
Alignment:
Q  8 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 104  Q
    ||||||||||| |||||||||  |||||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || |||||| ||||||| | |||    
T  24153274 agcaacataggtagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaaataatgcacataac 24153175  T
Q  105 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    || ||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  24153174 ataatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 24153122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 23077406 - 23077318
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgca 231  Q
    |||||||||| ||||||   ||||||| ||||||||||||||| | || ||||||||||||||||| |||| |||||||||||||||||    
T  23077406 cagcttcacaaattacagtaaacttctcatataggtctcattactacctaagggtccatctctaatcaaattatgcgacacagatcgca 23077318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 258
Target Start/End: Complemental strand, 14878433 - 14878318
Alignment:
Q  144 agcttcacagattacaaataacttcttatataggtctcattattgcccaaggg-tccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    ||||||||||||| ||  |||||||||||||| ||| ||||| | || | ||| |||||||||||| |||| ||||||||||||||||| | |||||| |    
T  14878433 agcttcacagattgcagttaacttcttatataagtcacattactacctagggggtccatctctaatcaaattatgcgacacagatcgcaatatcctcaat 14878334  T
Q  243 tgcactcagttctgga 258  Q
     |||||| ||||||||    
T  14878333 cgcactcggttctgga 14878318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 26686939 - 26687095
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||| |||||||||||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || | |  || |||||||||||||| |    
T  26686939 aacaacaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattccattatacttcaagtaatgcaca 26687038  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  26687039 taacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 26687095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 43840984 - 43841140
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||| |||||||| ||||||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||| |    
T  43840984 aacaacaacatagacagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcaca 43841083  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  43841084 taacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 43841140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 25476454 - 25476299
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||||||||| ||| |||||||||   |||||||||||||| ||||||||| ||| ||| |||||||| | | |||||  |||  ||||||||||||  |    
T  25476454 aacagcaacacaggtagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattcataattcaagtaatgcgca 25476355  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatt 156  Q
     ||||||||| ||| |||| |||| || ||||| ||||||  ||||||||||||||    
T  25476354 taacattatatcacatcattatcatcatcaacacatcttaaacagcttcacagatt 25476299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 42386462 - 42386619
Alignment:
Q  5 aacagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||   |||||||||||||||  ||||||||| ||| ||| |||||||| |   || ||  |||  |||||| ||||||||    
T  42386462 aacagcaacataggcagtatacaaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaaatattcattcataattcaagcaatgcata 42386561  T
Q  102 -aacattataacacttcataatcaacaacaacatatctt-attcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| ||| | ||||| |  |||||||||||||||    
T  42386562 taacattatatcacatcataatcaacatcaaaacatcttaaaacagcttcacagatta 42386619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 258
Target Start/End: Original strand, 15060483 - 15060597
Alignment:
Q  144 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcactt 243  Q
    ||||||||||||| ||  || | ||||||||||||| || || | || ||||||||||| ||||| || |||||||||||||||||||   |||| ||||    
T  15060483 agcttcacagattgcagttaccatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacatcctaactt 15060582  T
Q  244 gcactcagttctgga 258  Q
    ||| ||||| |||||    
T  15060583 gcaatcagtcctgga 15060597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 23083427 - 23083275
Alignment:
Q  8 agcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 103  Q
    |||||||||||||||||||   ||||| |||||||||| ||||||| | ||| ||| ||||||||||   || |||   | |||| ||||||||| | ||    
T  23083427 agcaacataggcagtatacaaaaacagaatgacataataatatcaattgcaagtcaacaacatcttaaatattcaattttacttctagtaatgcacataa 23083328  T
Q  104 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatt 156  Q
    ||||||| ||| |||||||||| | ||||| ||||||  ||||||||||||||    
T  23083327 cattatatcacatcataatcaatatcaacacatcttaaacagcttcacagatt 23083275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 40213765 - 40213634
Alignment:
Q  27 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 125  Q
    |||| ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  | |||||||||| || ||||||||| ||| ||||||||||    
T  40213765 aacatcatgacataataatatcaaatgcaagtcaacaacatctcaattatacattcataatccaagtaatgcgtataacattatatcacatcataatcaa 40213666  T
Q  126 caacaacatatcttattcagcttcacagatta 157  Q
    || ||||| ||||||  |||||| ||||||||    
T  40213665 catcaacacatcttaaacagctttacagatta 40213634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 15051707 - 15051791
Alignment:
Q  144 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatc 228  Q
    ||||||||| ||| ||  |||| ||||||||||||| || || | || ||||||||||| ||||| || ||||||||||||||||    
T  15051707 agcttcacaaattgcagttaacatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatc 15051791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 11862981 - 11863088
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| |||||||| ||||| ||||||| ||||| | || |||||||||   ||||| || | || ||| ||||||||||   |||| |||    
T  11862981 cagcttcacagatttcaaataacatcttaaataggtcacattaatacctaagggtccaatcctaatcaatttatacgaaacagatcgcaacatcctaact 11863080  T
Q  243 tgcactca 250  Q
    ||||||||    
T  11863081 tgcactca 11863088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 12496445 - 12496560
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||| ||||| ||||||| ||||| | || ||||||||| | ||||| || | |||||| ||||||||||   | || |||    
T  12496445 cagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaact 12496544  T
Q  243 tgcactcagttctgga 258  Q
    |||| |||||||||||    
T  12496545 tgcattcagttctgga 12496560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 11424828 - 11424676
Alignment:
Q  5 aacagcaacataggcagtatac--aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata- 101  Q
    ||||||||||||||||||||||  |||||||||||||||  |||||||   |||   |||||||||| |   || ||  |||  |||||||||||| ||     
T  11424828 aacagcaacataggcagtatacaaaacagcatgacataacaatatcaatagcaa---atcaacatctcaattatgcattcataattcaagtaatgcgtat 11424732  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||| ||| |||||| ||||  ||||| ||||||  |||||||||||||||    
T  11424731 aacattatatcacatcataaacaacttcaacacatcttaaacagcttcacagatta 11424676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 16796685 - 16796755
Alignment:
Q  88 tcaagtaatgcat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||||||| |||||||||| ||| |||||||||| ||||||| ||||||  || ||||||| ||||    
T  16796685 tcaagtaatgcataaaacattatatcacatcataatcaaaaacaacacatcttaaacaacttcacatatta 16796755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 14572641 - 14572688
Alignment:
Q  5 aacagcaacataggcagtatac--aacagcatgacataattatatcaa 50  Q
    ||||||||||||| ||||||||  |||||||||||||||| |||||||    
T  14572641 aacagcaacatagacagtatacaaaacagcatgacataataatatcaa 14572688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 16909941 - 16910025
Alignment:
Q  144 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatc 228  Q
    ||||||||||||| ||  |||| |||| |||||||| ||||| | || ||||||||||| ||||| || ||| || |||||||||    
T  16909941 agcttcacagattgcagttaacatcttgtataggtcacattactacctaagggtccatccctaatcaattcaagcaacacagatc 16910025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 202
Target Start/End: Original strand, 12857 - 13008
Alignment:
Q  50 aattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaacattataacacttcataatcaacaacaacatatcttattcagcttc 149  Q
    |||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||| || |||||||||||  |||||| || |||| ||||||    
T  12857 aattcaattcatcaacatcttatgtatacaattaatcttcaagtaatgcataaacattataatacatcataatcaactccaacatctcatatt-agcttc 12955  T
Q  150 acagattacaaataacttcttatataggtctcattattgcccaagggtccatc 202  Q
    ||| ||| ||  |||||||||||||||||||||||| | || |||||||||||    
T  12956 acaaattgcagttaacttcttatataggtctcattactacctaagggtccatc 13008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 8885 - 8770
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||||||  |||||||||||||||||||||||| | ||||||||||||||||||||  ||| ||||||||||| ||||| | ||||||||    
T  8885 cagcttcacagattacagttaacttcttatataggtctcattactacccaagggtccatctctaatcgaattatgcgacacaggtcgcaatatcctcact 8786  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  8785 tgcactcagttctgga 8770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 4901 - 5057
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||||| ||||||| |||||||||| | || |||| | |  ||||||||||||||    
T  4901 aacagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaagtattcaaataattctcaagtaatgcata 5000  T
Q  102 aa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    || ||||||| ||| |||||||||||||||||| ||||||  |||||||||||||||    
T  5001 aaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagatta 5057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 13263 - 13419
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| |||||||||||||||||||    
T  13263 aacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcata 13362  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||| ||||    
T  13363 taacattatatcacatcataatcaacatcaacacatcttaaacagcttcacaaatta 13419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 18431 - 18546
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| | |||||||||||||||||||| |||| |||||||||| |||||| | ||||||||    
T  18431 cagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacatatcgcaatatcctcact 18530  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  18531 tgcactcagttctgga 18546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 1550 - 1646
Alignment:
Q  162 taacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    ||||||||||||||||||||| || | |||||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  1550 taacttcttatataggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgga 1646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 65702 - 65606
Alignment:
Q  162 taacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    |||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||||| |||||||| | ||||||||||||||||||||||||    
T  65702 taacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacaaagatcgcaatatcctcacttgcactcagttctgga 65606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 128827 - 128871
Alignment:
Q  27 aacagcatgacataattatatcaaattcaattcatcaacatctta 71  Q
    |||||||||||||||| ||||||||| ||| ||| ||||||||||    
T  128827 aacagcatgacataataatatcaaatgcaagtcaacaacatctta 128871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 3525 - 3678
Alignment:
Q  8 agcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aa 103  Q
    |||||||||||||||||||||   |||||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| | ||    
T  3525 agcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcaaataa 3624  T
Q  104 cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  3625 cattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 3678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 401 - 543
Alignment:
Q  11 aacataggcagtatacaaca--gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacatt 107  Q
    |||||||||||||||||| |  ||||||| |||| ||||||| |  || ||| ||||||||||   || | |  || |||||||||||||| | ||||||    
T  401 aacataggcagtatacaaaatagcatgacgtaataatatcaattggaagtcaacaacatcttaaatattcgattatacttcaagtaatgcacataacatt 500  T
Q  108 ataacacttcataatcaacaacaacatatcttattcagcttca 150  Q
    ||| ||| |||||||||||| ||||| ||||||  ||||||||    
T  501 atatcacatcataatcaacatcaacacatcttaaacagcttca 543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 1117 - 949
Alignment:
Q  5 aacagcaacataggcagtatacaaca---gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||| ||||||||||||||||||| |   |||||||||||| ||||||| | ||||||||||||||||||   || |||| ||| |||||||||||||||    
T  1117 aacaacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgcata 1018  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 170  Q
    ||||||||| ||| ||||||||||| | |||| ||||||  |||||||| |||||| || |||| ||||    
T  1017 aacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctctt 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 168047 - 167879
Alignment:
Q  5 aacagcaacataggcagtatacaaca---gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||| ||||||||||||||||||| |   |||||||||||| ||||||| | ||||||||||||||||||   || |||| ||| |||||||||||||||    
T  168047 aacaacaacataggcagtatacaaaaatagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattattcaagtaatgcata 167948  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 170  Q
    ||||||||| ||| ||||||||||| | |||| ||||||  |||||||| |||||| || |||| ||||    
T  167947 aacattatatcacatcataatcaaccaaaacacatcttaaacagcttcaaagattataattaacctctt 167879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 51965 - 52121
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||||||||||||||| |||||||   |||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||| |    
T  51965 aacagcaacataggcaatatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcaca 52064  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| |||  ||||||| ||| ||||| ||||||  |||||||||||||||    
T  52065 taacattatatcacaacataatctacatcaacacatcttaaacagcttcacagatta 52121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 143 - 255
Target Start/End: Complemental strand, 15597 - 15485
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||||||||||||||||||||||| | |||||||||||||||||||| |||| | |||||||||||| || | ||||||||    
T  15597 cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattaagcgacacagatcacaatatcctcact 15498  T
Q  243 tgcactcagttct 255  Q
    |||||| ||||||    
T  15497 tgcactaagttct 15485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 1155 - 1040
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    ||||||||| |||| ||  ||||||||||||||||||  |||| | ||||||| |||||||||||| |||| ||||||||||||||||| | ||||||||    
T  1155 cagcttcactgattgcagttaacttcttatataggtcatattactacccaaggatccatctctaatcaaattatgcgacacagatcgcaatatcctcact 1056  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  1055 tgcactcagttctgga 1040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 773 - 888
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||||||||| ||||||||||||| | || ||||||||||||||||| |||| ||||||||||||||||| | |||||| |    
T  773 cagcttcacagattgcagttaacttcttaaataggtctcattactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcatt 872  T
Q  243 tgcactcagttctgga 258  Q
    | ||||||||||||||    
T  873 tacactcagttctgga 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 165
Target Start/End: Original strand, 6669 - 6826
Alignment:
Q  12 acataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcataaa-catt 107  Q
    |||||||||||||||||   || ||||||||||| |||||||   ||||||| ||||||||||   || |||||||| ||||||||||||||||| | ||    
T  6669 acataggcagtatacaaaatcaacatgacataatgatatcaatagcaattcaacaacatcttaaatattcaaacattattcaagtaatgcataaaacgtt 6768  T
Q  108 ataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataac 165  Q
    ||| ||| |||||||||||||||||||||| ||| |||||| |||||||| |||||||    
T  6769 atatcacatcataatcaacaacaacatatcatatacagctttacagattataaataac 6826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 48388 - 48273
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||| ||| ||  |||||||||||||||||||||||| | |||||||||||||||||||| |||| ||| ||||||||||||| | | || |||    
T  48388 cagcttcacatattgcatttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgtgacacagatcgcaatattcttact 48289  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  48288 tgcactcagttctgga 48273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 38407 - 38292
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||| |||||||||||||||||| ||||| | |||||||||||| ||||||| |||| |||||||||||||||||   | ||||||    
T  38407 cagcttcacagattgcaactaacttcttatataggtcacattactacccaagggtccaactctaatcaaattatgcgacacagatcgcaaagttctcact 38308  T
Q  243 tgcactcagttctgga 258  Q
    |||||| |||||||||    
T  38307 tgcacttagttctgga 38292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 255
Target Start/End: Complemental strand, 23594 - 23483
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||| ||||||||| |||||||| ||||| | |||||||||||| |  |||| |||| |||||||| ||||||||   | ||||||    
T  23594 cagcttcacagattgcaactaacttctt-tataggtcacattactacccaagggtccaacattaatcaaattatgcgacaaagatcgcaaagttctcact 23496  T
Q  243 tgcactcagttct 255  Q
    |||||||||||||    
T  23495 tgcactcagttct 23483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 2004 - 2160
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat- 100  Q
    |||||| |||||||||||||||||   || ||||||||||| ||||||| | ||||||| ||||||||||   || |||||||| ||||||||||||||     
T  2004 aacagcgacataggcagtatacaaaatcaacatgacataatgatatcaattgcaattcaacaacatcttaaatattcaaacattattcaagtaatgcata 2103  T
Q  101 aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||| | | |||||||||||||||||||||| ||| |||||| ||| ||||    
T  2104 aaacattatatctcatcataatcaacaacaacatatcatatacagctttacatatta 2160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 1903 - 2059
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||| ||||||||||   || ||||||||||| ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| |    
T  1903 aacagcaacatagacagtatacaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcaca 2002  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| ||||| ||||||   ||||||||||||||    
T  2003 taacattatatcacatcataatcaacatcaacacatcttaaatagcttcacagatta 2059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 24372 - 24214
Alignment:
Q  5 aacagcaacataggcagtatacaa----cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcat 100  Q
    ||||||||||||||||||||||||    |||||||||||||  ||||||| | ||||||||||||||||||   || |||| |||||||||||||||||     
T  24372 aacagcaacataggcagtatacaaaacacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcac 24273  T
Q  101 a-aacattataacacttcataa-tcaacaacaacatatcttattcagcttcacagatta 157  Q
    | ||||||||| ||| |||||| |||||| ||||| ||||||  |||||||||||||||    
T  24272 ataacattatatcacatcataattcaacatcaacacatcttaaacagcttcacagatta 24214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 34838 - 34723
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| | |||||||||||||||||||  || | ||| |||| || ||||| | | ||||||    
T  34838 cagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaaacaagttatgtgacaaaggtcgcaatgttctcact 34739  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  34738 tgcactcagttctgga 34723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 18381 - 18266
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    ||||||||||||||  |  |||||||||| ||||||| ||||| | |||| ||||||||||||||| |||| |||||||||| |||||| | ||||||||    
T  18381 cagcttcacagattgtagttaacttcttaaataggtcacattactacccaggggtccatctctaatcaaattatgcgacacaaatcgcaatatcctcact 18282  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  18281 tgcactcagttctgga 18266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 3933 - 4047
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||| |||  ||||||||||||| ||||| | |||||||||||||||||||| |||| |||||| ||||||||||   ||||||||    
T  3933 cagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctctaatcaaat-atgcgatacagatcgcaacatcctcact 4031  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  4032 tgcactcagttctgga 4047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 8364 - 8478
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||| |||  ||||||||||||| ||||| | |||||||||||||||||||| |||| |||||| ||||||||||   ||||||||    
T  8364 cagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctctaatcaaat-atgcgatacagatcgcaacatcctcact 8462  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  8463 tgcactcagttctgga 8478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 6190 - 6039
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||| ||||||||| |||||||||   ||||||||||| || ||||||| | ||||||||||||||||||   || |||| ||||||||||||||||| |    
T  6190 aacaacaacataggtagtatacaaaaacagcatgacatgataatatcaattgcaattcatcaacatcttaaatattcaaatattcttcaagtaatgcaca 6091  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcaca 152  Q
     ||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||    
T  6090 taacattatatcacatcataatcaacatcaacacatcttaaacagcttcaca 6039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 32997 - 33149
Alignment:
Q  8 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 104  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||| ||| | | ||||||||||   || |||  || |||||||||||||| | |||    
T  32997 agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattcaattatacttcaagtaatgcacataac 33096  T
Q  105 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  33097 attatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 33149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 38816 - 38968
Alignment:
Q  8 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 104  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||| ||| | | ||||||||||   || |||  || |||||||||||||| | |||    
T  38816 agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaaataaacaacatcttaaatattcaattatacttcaagtaatgcacataac 38915  T
Q  105 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  38916 attatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 38968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 258
Target Start/End: Complemental strand, 16330 - 16162
Alignment:
Q  90 aagtaatgcata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattg 188  Q
    |||||||||| | ||||||||| ||| ||||| ||||||  ||||| || ||  |||||||||||||| ||  ||||||||||||||||||  |||| |     
T  16330 aagtaatgcacataacattatatcacatcatattcaacattaacatttcataa-cagcttcacagattgcagttaacttcttatataggtcatattacta 16232  T
Q  189 cccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    |||||||||||| ||||||| |||| |||||||||||||||||    ||||||||||||||| |||||||    
T  16231 cccaagggtccacctctaatcaaattatgcgacacagatcgcaacaacctcacttgcactcaattctgga 16162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 14863 - 14978
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  ||||||||| ||||||| |||||| | |||| | ||||||||||||| |||| ||||||||||||| ||| | ||||||||    
T  14863 cagcttcacagattgcagttaacttcttgtataggtttcattactacccaggagtccatctctaatcaaattatgcgacacagattgcagtatcctcact 14962  T
Q  243 tgcactcagttctgga 258  Q
     |||||||||||||||    
T  14963 ggcactcagttctgga 14978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 23878 - 23993
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  ||||||||| ||||||| |||||| | |||| | |||||||||| || |||| ||||||||||||| ||| | ||||||||    
T  23878 cagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcact 23977  T
Q  243 tgcactcagttctgga 258  Q
     |||||||||||||||    
T  23978 ggcactcagttctgga 23993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 39302 - 39417
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  ||||||||| ||||||| |||||| | |||| | |||||||||| || |||| ||||||||||||| ||| | ||||||||    
T  39302 cagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcact 39401  T
Q  243 tgcactcagttctgga 258  Q
     |||||||||||||||    
T  39402 ggcactcagttctgga 39417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 3219 - 3068
Alignment:
Q  5 aacagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata- 101  Q
    ||||||||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||||||     
T  3219 aacagcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcatat 3120  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacag 153  Q
    ||||||||| ||| |||||||||||| ||||  ||||||  |||||||||||    
T  3119 aacattatatcacatcataatcaacatcaacgcatcttaaacagcttcacag 3068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 39529 - 39684
Alignment:
Q  5 aacagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata- 101  Q
    |||| |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  ||||||||||||| |     
T  39529 aacaacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcacat 39628  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  39629 aacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 39684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 75283 - 75128
Alignment:
Q  5 aacagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata- 101  Q
    |||| |||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  ||||||||||||| |     
T  75283 aacaacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcacat 75184  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  75183 aacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 75128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 6294 - 6409
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  ||||||||| ||||||| || ||| | |||| || |||||||||||| |||| |||||||||||||||||   ||||||||    
T  6294 cagcttcacagattgcagttaacttcttgtataggtttctttactacccagggatccatctctaatcaaattatgcgacacagatcgcaacatcctcact 6393  T
Q  243 tgcactcagttctgga 258  Q
    ||||| ||||||||||    
T  6394 tgcacacagttctgga 6409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 22959 - 23098
Alignment:
Q  27 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 125  Q
    |||||||||||||||| ||||||||| ||| ||| ||||||||||   || |||  || |||||||||||||| | ||||||||| ||| || |||||||    
T  22959 aacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcgtaatcaa 23058  T
Q  126 caacaacatatcttattcagcttcacagattacaaataac 165  Q
    || ||||| ||||||  ||||||||||||||| |||||||    
T  23059 catcaacacatcttaaacagcttcacagattataaataac 23098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 20959 - 21132
Alignment:
Q  1 aacaaacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatg 97  Q
    ||||| |||||||||||||| ||| |||   || ||||||||||| ||||||| | ||||||| |||||||||||  || ||||  |||| |||||||||    
T  20959 aacaatcagcaacataggcaatatgcaaaaacaacatgacataataatatcaattgcaattcaacaacatcttatatattcaaatgttctacaagtaatg 21058  T
Q  98 cat-aaacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 170  Q
    ||| |||||||||| ||| ||||||||| || ||||| ||||||  ||||||||||| ||| || |||| ||||    
T  21059 cataaaacattatatcacatcataatcagcatcaacacatcttaaacagcttcacaggttataattaacatctt 21132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 46655 - 46540
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||||||||||||||||| ||||| | || ||| ||||||| ||||| || | |||||||||||||||||   |||| |||    
T  46655 cagcttcacagattgcagttaacttcttatataggtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaact 46556  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  46555 tgcactcagttctgga 46540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 3255 - 3103
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   |||||||| ||||| |||||||||  |||||| |||||||| | | |||||  |||  |||||||||||| |     
T  3255 aacagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgtaattcaacaacatctcaagtatacattcataattcaagtaatgcgtt 3156  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacag 153  Q
     ||||||||| ||| |||||||||||| ||||| ||||||  |||||||||||    
T  3155 taacattatatcacatcataatcaacatcaacacatcttaaacagcttcacag 3103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 13141 - 13313
Alignment:
Q  2 acaaacagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgc 98  Q
    |||||||||||||||||||||||||   |||||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||    
T  13141 acaaacagcaacataggcagtatacaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgc 13240  T
Q  99 ata-aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttctt 170  Q
    | | ||||||||| |||  ||||||||||| ||||| ||||||  ||| ||||||||||| || |||| ||||    
T  13241 acataacattatatcacaacataatcaacatcaacacatcttaaacagtttcacagattataattaacatctt 13313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 26134 - 25978
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    ||||||||||||||||||||||||   |||||||||||||| |||||||||  |||||| |||| ||| | | |||||  |||  |||||||||||| |     
T  26134 aacagcaacataggcagtatacaaaaacagcatgacataataatatcaaatgtaattcaacaacgtctcaagtatacattcataattcaagtaatgcgtt 26035  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     ||||||||| ||| |||||||||||| ||||| ||||||  |||||||| ||||||    
T  26034 taacattatatcacatcataatcaacatcaacacatcttaaacagcttcatagatta 25978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 44776 - 44709
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatct 69  Q
    |||||||||| |||||||||||||   |||||||||||||| ||||||||| ||| ||| ||||||||    
T  44776 aacagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatct 44709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 15642 - 15707
Alignment:
Q  193 agggtccatctctaattaaatcatgcgacacagatcgcattttcctcacttgcactcagttctgga 258  Q
    |||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  15642 agggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgga 15707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 8601 - 8446
Alignment:
Q  5 aacagcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata- 101  Q
    ||||||||||||||||||||  | |||||||||||||||| ||||||| | ||| ||| || |||||||   || |||  || |||||||||||||| |     
T  8601 aacagcaacataggcagtatcaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacat 8502  T
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    ||||||||| |||  ||||||||||| ||||| ||||||  |||||||||||||||    
T  8501 aacattatatcacaacataatcaacatcaacacatcttaaacagcttcacagatta 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 7006 - 6891
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||| ||||||||||||| ||||| | || ||||| ||||| ||||| || |||||||||||||||||||   | |||| |    
T  7006 cagcttcacagattgcagttaacatcttatataggtcacattactacctaagggcccatccctaatcaactcatgcgacacagatcgcaacattctcaat 6907  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  6906 tgcactcagttctgga 6891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 4584 - 4715
Alignment:
Q  27 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 125  Q
    |||||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || ||||||||| ||| ||||||||||    
T  4584 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaa 4683  T
Q  126 caacaacatatcttattcagcttcacagatta 157  Q
    || ||||| ||||||  |||||||||||||||    
T  4684 catcaacacatcttaaacagcttcacagatta 4715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 12166 - 12297
Alignment:
Q  27 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 125  Q
    |||||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || ||||||||| ||| ||||||||||    
T  12166 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaa 12265  T
Q  126 caacaacatatcttattcagcttcacagatta 157  Q
    || ||||| ||||||  |||||||||||||||    
T  12266 catcaacacatcttaaacagcttcacagatta 12297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 22118 - 22249
Alignment:
Q  27 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 125  Q
    |||||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || ||||||||| ||| ||||||||||    
T  22118 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaa 22217  T
Q  126 caacaacatatcttattcagcttcacagatta 157  Q
    || ||||| ||||||  |||||||||||||||    
T  22218 catcaacacatcttaaacagcttcacagatta 22249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 157
Target Start/End: Complemental strand, 340012 - 339863
Alignment:
Q  10 caacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacat 106  Q
    |||||||||||||||||||  || ||||||||||| ||||||||| ||| ||| |||||||| | | |||||  |||  |||||||||||  || |||||    
T  340012 caacataggcagtatacaaaacaacatgacataataatatcaaat-caagtcaacaacatctcaagtatacattcataattcaagtaatgtgtataacat 339914  T
Q  107 tataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||| ||| |||||||||||| ||||| ||||||  |||||||||||||||    
T  339913 tatatcacatcataatcaacatcaacacatcttaaacagcttcacagatta 339863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 71353 - 71419
Alignment:
Q  5 aacagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 70  Q
    ||||||||||||||||| |||||| ||||||||||||||  |||||| ||||||||| |||||||||    
T  71353 aacagcaacataggcagcatacaaacagcatgacataatattatcaatttcaattcaacaacatctt 71419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 17286 - 17128
Alignment:
Q  5 aacagcaacataggcagtatacaa-----cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgc- 98  Q
    ||||||||||||||||||||||||     |||||||||||||| ||||||||| ||| ||| |||||||| | | |||||  |||  ||||||||||||     
T  17286 aacagcaacataggcagtatacaaaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattcataattcaagtaatgcg 17187  T
Q  99 ataaacattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
     | ||||||||| ||| |||||||||||| |||||  |||||  |||||| ||||||||    
T  17186 tttaacattatatcacatcataatcaacatcaacacgtcttaaacagctttacagatta 17128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 14005 - 13890
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||  |||| || ||||||||||   ||| | ||||||||||| ||||||| ||| | ||||||||||| |||||   | ||||||    
T  14005 cagcttcacagatttcagttaacatcctatataggtcattttactacccaagggtccttctctaaataagttatgcgacacaggtcgcaaagttctcact 13906  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  13905 tgcactcagttctgga 13890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 202
Target Start/End: Original strand, 23995 - 24094
Alignment:
Q  102 aacattataacacttcataatcaacaacaacatatcttattcagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccat 201  Q
    ||||||||| ||| ||||| ||||||  ||||| |||||  |||||||||||||| ||  |||||||||||||||||||||||| | |||||||||||||    
T  23995 aacattatatcacatcatattcaacactaacatctcttaa-cagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccat 24093  T

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Target: scaffold0026 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 25951 - 26103
Alignment:
Q  8 agcaacataggcagtatacaacag--catgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 104  Q
    ||||||||||||||||||||| |   ||||||||||| ||||||||| ||| | | |||||||| |   || |||  || |||||||||||||||  |||    
T  25951 agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatattcaattatacttcaagtaatgcatttaac 26050  T
Q  105 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||| ||| |||||||||||| ||||  ||||||  |||||||||||||||    
T  26051 attatatcacatcataatcaacatcaacgcatcttaaacagcttcacagatta 26103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 39913 - 40065
Alignment:
Q  8 agcaacataggcagtatacaacag--catgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 104  Q
    ||||||||||||||||||||| |   ||||||||||| ||||||||| ||| | | |||||||| |   || |||  || |||||||||||||||  |||    
T  39913 agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatattcaattatacttcaagtaatgcatttaac 40012  T
Q  105 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||| ||| |||||||||||| ||||  ||||||  |||||||||| ||||    
T  40013 attatatcacatcataatcaacatcaacgcatcttaaacagcttcacaaatta 40065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 154
Target Start/End: Complemental strand, 16669 - 16516
Alignment:
Q  5 aacagcaacataggcagtatac---aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata 101  Q
    |||||||||| | |||||||||   |||||||||||||||| |||||||||  || ||| || ||||| | | |||||  |||  |||||||||||| ||    
T  16669 aacagcaacacaagcagtatacgaaaacagcatgacataataatatcaaatggaagtcaacagcatctcaagtatacattcataattcaagtaatgcgta 16570  T
Q  102 -aacattataacacttcataatcaacaacaacatatcttattcagcttcacaga 154  Q
     ||||||||| ||| ||| |||||||| ||||| ||||||  ||||||||||||    
T  16569 taacattatatcacatcaaaatcaacatcaacacatcttaaacagcttcacaga 16516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 27911 - 28034
Alignment:
Q  31 gcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaacaac 129  Q
    |||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  ||||||||||||||| ||||||||| ||| |||||||||||| |    
T  27911 gcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcatataacattatatcacatcataatcaacatc 28010  T
Q  130 aacatatcttattcagcttcacag 153  Q
    |||| ||||||  || ||||||||    
T  28011 aacaaatcttaaacaacttcacag 28034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 32626 - 32740
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||| |||| | ||| | ||||| | ||| | |||| ||||||| ||||||  |||| ||||||||||||||||  | ||||||||    
T  32626 cagcttcacagattgcaattaacattttaaa-aggtcactttactacccaggggtccaactctaaacaaattatgcgacacagatcgcgatatcctcact 32724  T
Q  243 tgcactcagttctgga 258  Q
    ||||||||||||||||    
T  32725 tgcactcagttctgga 32740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 1052 - 1122
Alignment:
Q  88 tcaagtaatgcataaa-cattataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||| ||||||  || ||||||||||||    
T  1052 tcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacatcttcacagatta 1122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 3574 - 3460
Alignment:
Q  27 aacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattataacacttcataatcaa 125  Q
    |||||||||||||||| ||||||||| ||| ||| |||||||| |   |||||  |||  |||||||||||| || ||||||||| ||| ||||||||||    
T  3574 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacactcataattcaagtaatgcgtataacattatatcacatcataatcaa 3475  T
Q  126 caacaacatatctta 140  Q
    || ||||| ||||||    
T  3474 catcaacacatctta 3460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 33025 - 32901
Alignment:
Q  5 aacagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata- 101  Q
    |||||||||| |||||||||||||  |||||||||||||| ||||||| | ||||||| ||||||||||   || | |  || |||| |||||||||||     
T  33025 aacagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc-attatacttcgagtaatgcatat 32927  T
Q  102 aacattataacacttcataatcaaca 127  Q
    ||||||||||||| |||| |||||||    
T  32926 aacattataacacatcatgatcaaca 32901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 45980 - 46104
Alignment:
Q  5 aacagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata- 101  Q
    |||||||||| |||||||||||||  |||||||||||||| ||||||| | ||||||| ||||||||||   || | |  || |||| |||||||||||     
T  45980 aacagcaacacaggcagtatacaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc-attatacttcgagtaatgcatat 46078  T
Q  102 aacattataacacttcataatcaaca 127  Q
    ||||||||||||| |||| |||||||    
T  46079 aacattataacacatcatgatcaaca 46104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 15483 - 15417
Alignment:
Q  5 aacagcaacataggcagtatacaa-cagcatgacataattatatcaaattcaattcatcaacatctt 70  Q
    |||| |||||||||||| |||||| |||||||||||||| ||||||| ||||||||| |||||||||    
T  15483 aacatcaacataggcagcatacaaacagcatgacataataatatcaatttcaattcaacaacatctt 15417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12617 - 12687
Alignment:
Q  1 aacaaacagcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 69  Q
    ||||||||||||||||||||||||  | |||||||||| ||||  ||||||||| ||| ||||||||||||    
T  12617 aacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 12687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 18584 - 18525
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatc 202  Q
    |||||||||||||| ||  |||||||||||||||||||||||| | || |||||||||||    
T  18584 cagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatc 18525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 157
Target Start/End: Original strand, 39968 - 40120
Alignment:
Q  8 agcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aac 104  Q
    |||||||||||||||||||||  || ||||||||||| ||||||||| ||  |||  |||||||||   ||   |  || |||||||||||||| | |||    
T  39968 agcaacataggcagtatacaaaacaacatgacataataatatcaaatgcatgtcaataacatcttaaatatttgattatacttcaagtaatgcacataac 40067  T
Q  105 attataacacttcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||| ||| |||||||||||| ||||| ||| ||   ||||||||||||||    
T  40068 attatatcacatcataatcaacatcaacacatcataaagagcttcacagatta 40120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 21497 - 21382
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||| ||| ||  |||| ||||| ||||||| ||||| | || ||||||||||| ||||| || | |||||| ||||||||||   |||| |||    
T  21497 cagcttcacaaatttcagttaacatcttaaataggtcacattactacctaagggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaact 21398  T
Q  243 tgcactcagttctgga 258  Q
    |||| |||||||||||    
T  21397 tgcattcagttctgga 21382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 258
Target Start/End: Original strand, 582 - 696
Alignment:
Q  144 agcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcactt 243  Q
    ||||||||||||  ||| |||| ||||| ||||||| ||||| | || ||||||||||| | ||| || | |||||| ||||||||||   |||| ||||    
T  582 agcttcacagatctcaattaacatcttaaataggtcgcattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaactt 681  T
Q  244 gcactcagttctgga 258  Q
    ||| |||||||||||    
T  682 gcattcagttctgga 696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 152
Target Start/End: Complemental strand, 1021 - 881
Alignment:
Q  12 acataggcagtatacaacagcatgacataattatatcaaattcaattcatcaacatcttatgcatacaaacattcttcaagtaatgcata-aacattata 110  Q
    |||||||||||||||||||||||| |||||| ||||| ||| ||| ||| ||| |||| |   || ||| |||  ||||||||||||| | |||||||||    
T  1021 acataggcagtatacaacagcatggcataataatatc-aatgcaagtcaacaaaatctcaaatattcaatcataattcaagtaatgcacataacattata 923  T
Q  111 acacttcataatcaacaacaacatatcttattcagcttcaca 152  Q
     ||| || ||||| ||| ||||| ||||||  ||||||||||    
T  922 tcacatcgtaatcgacatcaacacatcttaaacagcttcaca 881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 255
Target Start/End: Original strand, 348 - 460
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| |   |||| |||||  |||||| ||||| | || ||||||||||| ||||| || | ||||||||||||||  | | |||| |||    
T  348 cagcttcacagatttccgttaacatcttaattaggtcacattactacctaagggtccatccctaatcaatttatgcgacacagatccaaatatcctaact 447  T
Q  243 tgcactcagttct 255  Q
    |||||||||||||    
T  448 tgcactcagttct 460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 28466 - 28536
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacatcttat 72  Q
    |||| |||||||||||||||||||   || ||||||||||| ||||||| | ||||||| |||||||||||    
T  28466 aacaacaacataggcagtatacaaaaacaacatgacataataatatcaattgcaattcaacaacatcttat 28536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1081 - 1151
Alignment:
Q  1 aacaaacagcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 69  Q
    ||||||||||||||||||||||||  | |||||||||| ||||  ||||||||| | | ||||||||||||    
T  1081 aacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatacgaatcatcaacatct 1151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8515 - 8585
Alignment:
Q  1 aacaaacagcaacataggcagtatacaa--cagcatgacataattatatcaaattcaattcatcaacatct 69  Q
    |||||||| ||||||||||||||| |||  |||||||| ||||  ||||||||| ||| ||||||||||||    
T  8515 aacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatct 8585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 6344 - 6229
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||| ||| ||  |||| ||||| ||||||| ||||| | || ||||||||| | ||||| || | |||||| ||| |||||| | |||| |||    
T  6344 cagcttcacatatttcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacaaatcgcaatatcctaact 6245  T
Q  243 tgcactcagttctgga 258  Q
    |||| |||||||||||    
T  6244 tgcattcagttctgga 6229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 11512 - 11447
Alignment:
Q  5 aacagcaacataggcagtatacaa---cagcatgacataattatatcaaattcaattcatcaacat 67  Q
    |||| ||||||||| |||||||||   || ||||||||||| ||||||| ||||||||||||||||    
T  11512 aacaacaacataggtagtatacaaaaacaacatgacataataatatcaatttcaattcatcaacat 11447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 4861 - 4746
Alignment:
Q  143 cagcttcacagattacaaataacttcttatataggtctcattattgcccaagggtccatctctaattaaatcatgcgacacagatcgcattttcctcact 242  Q
    |||||||||||||| ||   |||||||||||||||||  | |  | |||||| ||||| |||| || |||| |||||||||| |||||| | |||||| |    
T  4861 cagcttcacagattgcagtaaacttcttatataggtcataatgctacccaagagtccacctctgatcaaattatgcgacacaaatcgcaatgtcctcaat 4762  T
Q  243 tgcactcagttctgga 258  Q
    ||||||| ||| ||||    
T  4761 tgcactcggttttgga 4746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 53621 - 53551
Alignment:
Q  1 aacaaacagcaacataggcagtat--acaacagcatgacataattatatcaaattcaattcatcaacatct 69  Q
    ||||||||||||||||||||||||  | |||| ||||| ||||  ||||||||| ||| ||||||||||||    
T  53621 aacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatct 53551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 3648 - 3689
Alignment:
Q  116 tcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||||||||| ||||||  |||||||||||||||    
T  3648 tcataatcaacaacaacacatcttaaacagcttcacagatta 3689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 7712 - 7753
Alignment:
Q  116 tcataatcaacaacaacatatcttattcagcttcacagatta 157  Q
    |||||||||||||||||| ||||||  |||||||||||||||    
T  7712 tcataatcaacaacaacacatcttaaacagcttcacagatta 7753  T

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