View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11530_low_2 (Length: 621)

Name: NF11530_low_2
Description: NF11530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11530_low_2
NF11530_low_2
[»] chr4 (64 HSPs)
chr4 (297-516)||(18935529-18935744)
chr4 (172-319)||(18930338-18930485)
chr4 (328-516)||(27651718-27651906)
chr4 (19-148)||(18930153-18930280)
chr4 (19-148)||(18934821-18934948)
chr4 (172-294)||(18935006-18935128)
chr4 (327-516)||(36194482-36194671)
chr4 (352-516)||(22300639-22300803)
chr4 (352-509)||(19853669-19853826)
chr4 (352-516)||(9713695-9713866)
chr4 (359-509)||(2520578-2520729)
chr4 (346-509)||(53810816-53810980)
chr4 (346-516)||(1621648-1621806)
chr4 (347-509)||(22610973-22611135)
chr4 (353-508)||(35348101-35348256)
chr4 (353-509)||(4142912-4143068)
chr4 (359-508)||(47320560-47320709)
chr4 (352-516)||(51888367-51888531)
chr4 (394-509)||(22038958-22039071)
chr4 (344-509)||(26633828-26633993)
chr4 (354-509)||(21686398-21686553)
chr4 (360-509)||(22558621-22558772)
chr4 (358-516)||(26091064-26091222)
chr4 (359-515)||(9643178-9643338)
chr4 (352-509)||(13633908-13634067)
chr4 (407-516)||(36161563-36161670)
chr4 (383-510)||(9178182-9178310)
chr4 (360-499)||(22063948-22064087)
chr4 (368-510)||(9165198-9165342)
chr4 (411-509)||(24099227-24099327)
chr4 (359-508)||(10496143-10496292)
chr4 (358-516)||(36204532-36204689)
chr4 (421-509)||(32766377-32766466)
chr4 (439-509)||(56040801-56040873)
chr4 (382-516)||(5119162-5119298)
chr4 (359-494)||(42032700-42032835)
chr4 (382-509)||(43510023-43510151)
chr4 (356-510)||(28857180-28857331)
chr4 (356-430)||(31891504-31891578)
chr4 (383-510)||(54021686-54021814)
chr4 (439-510)||(52944193-52944264)
chr4 (382-510)||(18048715-18048838)
chr4 (419-514)||(18139027-18139121)
chr4 (451-500)||(21223447-21223496)
chr4 (419-514)||(49126240-49126334)
chr4 (460-511)||(31891444-31891495)
chr4 (410-516)||(7009124-7009229)
chr4 (425-494)||(21223628-21223697)
chr4 (439-508)||(37030145-37030214)
chr4 (444-515)||(9634560-9634632)
chr4 (419-510)||(47416765-47416854)
chr4 (439-494)||(21225348-21225403)
chr4 (451-494)||(21231772-21231815)
chr4 (383-494)||(51535082-51535192)
chr4 (419-509)||(3673612-3673702)
chr4 (438-488)||(12199871-12199920)
chr4 (404-516)||(47158074-47158186)
chr4 (435-510)||(9528997-9529070)
chr4 (421-504)||(12265338-12265419)
chr4 (419-510)||(34024555-34024644)
chr4 (460-516)||(35395826-35395882)
chr4 (435-510)||(43444290-43444363)
chr4 (353-469)||(48257647-48257763)
chr4 (476-516)||(52978743-52978783)
[»] chr5 (34 HSPs)
chr5 (352-516)||(39567069-39567233)
chr5 (343-516)||(14210998-14211168)
chr5 (340-516)||(28541063-28541233)
chr5 (387-516)||(2979463-2979592)
chr5 (344-509)||(38597563-38597728)
chr5 (370-509)||(9113882-9114022)
chr5 (344-516)||(7035993-7036166)
chr5 (346-509)||(13006996-13007160)
chr5 (352-516)||(11977087-11977252)
chr5 (368-508)||(38007147-38007286)
chr5 (346-507)||(6012297-6012459)
chr5 (440-516)||(19103624-19103700)
chr5 (382-516)||(26878229-26878363)
chr5 (383-509)||(34945226-34945353)
chr5 (382-509)||(31391913-31392042)
chr5 (383-507)||(26825233-26825360)
chr5 (438-516)||(8096648-8096726)
chr5 (404-508)||(8088371-8088474)
chr5 (346-516)||(8985083-8985258)
chr5 (411-509)||(10722605-10722705)
chr5 (343-516)||(7929963-7930133)
chr5 (352-509)||(25979931-25980089)
chr5 (382-516)||(10332702-10332837)
chr5 (353-516)||(15571260-15571424)
chr5 (419-510)||(10649325-10649414)
chr5 (442-510)||(2057957-2058023)
chr5 (445-509)||(24229942-24230006)
chr5 (435-510)||(30371612-30371685)
chr5 (382-516)||(6216698-6216837)
chr5 (359-516)||(41749100-41749260)
chr5 (363-440)||(19103810-19103886)
chr5 (354-414)||(14664152-14664212)
chr5 (435-510)||(26578137-26578210)
chr5 (438-494)||(41630364-41630418)
[»] scaffold0888 (1 HSPs)
scaffold0888 (353-516)||(1825-1988)
[»] chr7 (42 HSPs)
chr7 (344-516)||(22742707-22742878)
chr7 (344-516)||(24350994-24351166)
chr7 (372-516)||(35132747-35132891)
chr7 (340-516)||(1749294-1749466)
chr7 (358-516)||(28476005-28476161)
chr7 (382-509)||(30756976-30757104)
chr7 (359-516)||(19404905-19405062)
chr7 (344-504)||(8013627-8013788)
chr7 (352-509)||(9450294-9450452)
chr7 (368-510)||(37837615-37837757)
chr7 (359-516)||(47590097-47590252)
chr7 (359-510)||(42978391-42978544)
chr7 (360-509)||(12141464-12141615)
chr7 (353-495)||(19296655-19296798)
chr7 (371-509)||(48316969-48317108)
chr7 (358-516)||(5078545-5078702)
chr7 (345-509)||(13797089-13797253)
chr7 (360-509)||(48061206-48061357)
chr7 (453-516)||(48930657-48930720)
chr7 (394-504)||(11343618-11343726)
chr7 (382-516)||(24770061-24770195)
chr7 (359-509)||(34899764-34899912)
chr7 (352-516)||(4529855-4530020)
chr7 (386-506)||(39171751-39171873)
chr7 (346-508)||(39328951-39329114)
chr7 (438-516)||(27996951-27997029)
chr7 (438-503)||(35665295-35665361)
chr7 (354-508)||(5348747-5348896)
chr7 (352-510)||(25067862-25068019)
chr7 (422-508)||(25255084-25255169)
chr7 (439-509)||(40993044-40993116)
chr7 (418-507)||(45349962-45350051)
chr7 (435-510)||(46821899-46821972)
chr7 (469-507)||(3394365-3394403)
chr7 (439-501)||(24069607-24069669)
chr7 (438-516)||(26610895-26610972)
chr7 (359-484)||(3224601-3224725)
chr7 (469-510)||(49148248-49148289)
chr7 (435-510)||(2843346-2843419)
chr7 (439-516)||(5775075-5775154)
chr7 (354-402)||(25287446-25287494)
chr7 (406-494)||(38051240-38051327)
[»] chr3 (60 HSPs)
chr3 (347-516)||(21289971-21290139)
chr3 (340-516)||(51303790-51303965)
chr3 (368-516)||(7546400-7546550)
chr3 (340-516)||(8914466-8914643)
chr3 (352-507)||(40487099-40487254)
chr3 (354-516)||(42460519-42460685)
chr3 (354-516)||(16235196-16235357)
chr3 (353-516)||(50194434-50194597)
chr3 (359-508)||(629064-629214)
chr3 (352-516)||(47895925-47896090)
chr3 (359-516)||(29921833-29921991)
chr3 (359-516)||(29970986-29971144)
chr3 (353-507)||(10232845-10233000)
chr3 (359-508)||(53808024-53808170)
chr3 (353-503)||(43016630-43016782)
chr3 (382-509)||(6954853-6954981)
chr3 (353-507)||(9998241-9998397)
chr3 (359-516)||(29249024-29249181)
chr3 (353-509)||(21431400-21431556)
chr3 (343-515)||(47042203-47042375)
chr3 (353-507)||(10108013-10108166)
chr3 (382-510)||(33579672-33579800)
chr3 (346-509)||(36461588-36461752)
chr3 (352-509)||(45568601-45568759)
chr3 (353-509)||(52923274-52923429)
chr3 (350-509)||(31271964-31272124)
chr3 (383-509)||(54148793-54148920)
chr3 (459-516)||(51923611-51923668)
chr3 (383-507)||(10229279-10229406)
chr3 (345-509)||(48650891-48651057)
chr3 (359-509)||(21533966-21534116)
chr3 (439-512)||(37040632-37040706)
chr3 (359-500)||(38142352-38142493)
chr3 (347-480)||(40556480-40556613)
chr3 (386-516)||(35175205-35175337)
chr3 (356-510)||(22290716-22290870)
chr3 (439-509)||(36910798-36910869)
chr3 (439-509)||(43488747-43488818)
chr3 (382-499)||(32701302-32701420)
chr3 (438-516)||(53508081-53508159)
chr3 (372-429)||(51923542-51923599)
chr3 (346-509)||(9319831-9319988)
chr3 (353-516)||(35865084-35865247)
chr3 (382-510)||(4396488-4396611)
chr3 (439-509)||(9797686-9797758)
chr3 (383-516)||(23800059-23800195)
chr3 (439-516)||(52116161-52116238)
chr3 (439-510)||(3785714-3785784)
chr3 (394-494)||(4821623-4821725)
chr3 (438-516)||(20465120-20465197)
chr3 (447-499)||(953566-953619)
chr3 (439-516)||(1649278-1649358)
chr3 (435-510)||(25631646-25631719)
chr3 (368-505)||(7449063-7449200)
chr3 (368-505)||(7457205-7457342)
chr3 (354-443)||(14859273-14859362)
chr3 (382-455)||(38545639-38545712)
chr3 (435-510)||(14464390-14464463)
chr3 (435-510)||(44907518-44907591)
chr3 (435-506)||(50611540-50611609)
[»] chr2 (53 HSPs)
chr2 (344-516)||(10237364-10237535)
chr2 (353-516)||(3308724-3308887)
chr2 (352-516)||(14955307-14955471)
chr2 (359-507)||(32448782-32448929)
chr2 (352-516)||(12648075-12648239)
chr2 (352-509)||(4098887-4099045)
chr2 (382-516)||(37994089-37994222)
chr2 (368-509)||(18763268-18763409)
chr2 (353-516)||(29574784-29574945)
chr2 (346-509)||(4778531-4778695)
chr2 (346-509)||(7448026-7448189)
chr2 (353-509)||(31788241-31788398)
chr2 (352-509)||(7646256-7646415)
chr2 (382-503)||(27097569-27097690)
chr2 (368-516)||(11985381-11985529)
chr2 (344-516)||(43397271-43397442)
chr2 (382-509)||(9169415-9169542)
chr2 (362-494)||(5428039-5428173)
chr2 (382-516)||(24461253-24461385)
chr2 (346-472)||(12677491-12677617)
chr2 (352-509)||(36943281-36943439)
chr2 (382-509)||(37876755-37876883)
chr2 (368-509)||(7678029-7678177)
chr2 (350-508)||(19029066-19029223)
chr2 (439-508)||(1415436-1415505)
chr2 (383-508)||(18107896-18108020)
chr2 (441-509)||(4041752-4041820)
chr2 (383-509)||(38444982-38445108)
chr2 (359-509)||(1421462-1421617)
chr2 (370-499)||(8809084-8809213)
chr2 (439-509)||(19062510-19062580)
chr2 (419-508)||(6436459-6436548)
chr2 (419-510)||(30420550-30420639)
chr2 (347-516)||(35220110-35220275)
chr2 (352-510)||(19597663-19597820)
chr2 (381-508)||(17994874-17995002)
chr2 (353-516)||(29279721-29279884)
chr2 (435-494)||(14423160-14423219)
chr2 (447-516)||(19596027-19596095)
chr2 (459-516)||(23933772-23933829)
chr2 (382-510)||(37416516-37416644)
chr2 (406-516)||(30400188-30400300)
chr2 (451-510)||(42949619-42949677)
chr2 (433-510)||(4192726-4192801)
chr2 (384-510)||(28718106-28718230)
chr2 (442-510)||(27249270-27249336)
chr2 (439-516)||(36691746-36691822)
chr2 (435-510)||(3725070-3725143)
chr2 (435-510)||(21570527-21570600)
chr2 (464-508)||(28227844-28227888)
chr2 (438-506)||(33760358-33760425)
chr2 (451-510)||(36233910-36233967)
chr2 (435-510)||(45128093-45128166)
[»] chr1 (57 HSPs)
chr1 (356-513)||(34413244-34413402)
chr1 (345-516)||(16161602-16161773)
chr1 (381-516)||(48749996-48750130)
chr1 (359-508)||(49626694-49626843)
chr1 (347-508)||(34878430-34878591)
chr1 (344-509)||(45789334-45789498)
chr1 (359-508)||(44543057-44543204)
chr1 (359-510)||(10776614-10776768)
chr1 (352-516)||(12634944-12635108)
chr1 (362-509)||(29738793-29738941)
chr1 (352-516)||(37720271-37720434)
chr1 (383-509)||(11462604-11462732)
chr1 (360-509)||(5983621-5983772)
chr1 (411-509)||(32394835-32394933)
chr1 (359-516)||(1742065-1742222)
chr1 (359-516)||(15435023-15435180)
chr1 (356-507)||(21686654-21686804)
chr1 (353-516)||(32679250-32679413)
chr1 (344-509)||(7337820-7337986)
chr1 (382-508)||(18939129-18939254)
chr1 (447-516)||(36775867-36775935)
chr1 (413-509)||(45415397-45415494)
chr1 (397-508)||(31692623-31692733)
chr1 (394-508)||(34528538-34528650)
chr1 (359-516)||(940149-940306)
chr1 (387-516)||(23291793-23291925)
chr1 (360-516)||(31983965-31984122)
chr1 (382-486)||(7836947-7837051)
chr1 (440-510)||(26535260-26535330)
chr1 (383-516)||(15836001-15836134)
chr1 (439-507)||(568943-569010)
chr1 (387-516)||(9341536-9341665)
chr1 (442-516)||(13144962-13145036)
chr1 (352-516)||(51916802-51916967)
chr1 (359-504)||(14872423-14872570)
chr1 (386-506)||(43412183-43412301)
chr1 (352-458)||(6218036-6218142)
chr1 (383-508)||(31317559-31317684)
chr1 (347-449)||(35484596-35484698)
chr1 (382-510)||(44915452-44915582)
chr1 (458-516)||(47132783-47132841)
chr1 (437-502)||(13075800-13075865)
chr1 (346-509)||(35462194-35462359)
chr1 (435-510)||(25728078-25728151)
chr1 (439-510)||(27456405-27456477)
chr1 (394-516)||(15492113-15492232)
chr1 (356-455)||(24012866-24012965)
chr1 (394-508)||(19060721-19060835)
chr1 (421-510)||(25406403-25406490)
chr1 (411-499)||(36894408-36894497)
chr1 (438-516)||(27580277-27580357)
chr1 (460-516)||(31918874-31918931)
chr1 (411-508)||(34479329-34479425)
chr1 (468-509)||(35484548-35484589)
chr1 (435-510)||(20266191-20266264)
chr1 (419-510)||(35584740-35584829)
chr1 (435-510)||(51871753-51871826)
[»] chr8 (46 HSPs)
chr8 (354-516)||(18890854-18891015)
chr8 (359-516)||(14585485-14585640)
chr8 (352-516)||(41896286-41896451)
chr8 (352-509)||(31013726-31013884)
chr8 (359-503)||(8980980-8981125)
chr8 (359-508)||(25191223-25191372)
chr8 (360-508)||(15344090-15344238)
chr8 (360-508)||(15433155-15433303)
chr8 (360-508)||(15524459-15524607)
chr8 (368-509)||(37971087-37971226)
chr8 (382-508)||(1239560-1239686)
chr8 (362-506)||(23230430-23230575)
chr8 (411-509)||(20553401-20553499)
chr8 (359-509)||(20559901-20560050)
chr8 (359-509)||(20571463-20571612)
chr8 (340-442)||(39655275-39655377)
chr8 (359-493)||(1236865-1236999)
chr8 (358-516)||(24099411-24099567)
chr8 (359-516)||(27110612-27110770)
chr8 (382-510)||(3673252-3673379)
chr8 (352-499)||(10377473-10377620)
chr8 (359-494)||(17693784-17693919)
chr8 (390-510)||(8443675-8443795)
chr8 (411-516)||(29937950-29938055)
chr8 (438-516)||(40619221-40619299)
chr8 (361-509)||(7883395-7883544)
chr8 (383-502)||(8867636-8867755)
chr8 (404-504)||(8826036-8826138)
chr8 (354-508)||(45445968-45446122)
chr8 (383-468)||(7677477-7677562)
chr8 (414-506)||(28897549-28897642)
chr8 (386-516)||(3240185-3240317)
chr8 (439-509)||(40211460-40211531)
chr8 (437-494)||(39657328-39657386)
chr8 (439-508)||(5046614-5046682)
chr8 (382-516)||(29617605-29617740)
chr8 (435-510)||(9619477-9619550)
chr8 (419-510)||(14907043-14907132)
chr8 (383-510)||(33214786-33214913)
chr8 (354-456)||(8412557-8412660)
chr8 (439-516)||(14545050-14545129)
chr8 (404-470)||(14916332-14916397)
chr8 (439-509)||(44091903-44091971)
chr8 (435-510)||(2655761-2655834)
chr8 (419-510)||(43890244-43890333)
chr8 (435-510)||(44577928-44578001)
[»] chr6 (33 HSPs)
chr6 (359-516)||(14800989-14801146)
chr6 (344-516)||(545793-545963)
chr6 (352-516)||(1523183-1523345)
chr6 (340-516)||(14801582-14801760)
chr6 (345-509)||(12170263-12170428)
chr6 (358-516)||(8102498-8102659)
chr6 (419-516)||(30776508-30776605)
chr6 (353-509)||(33053325-33053482)
chr6 (386-509)||(606013-606137)
chr6 (352-509)||(3913731-3913888)
chr6 (413-510)||(30894472-30894570)
chr6 (347-509)||(68158-68320)
chr6 (370-509)||(23128411-23128551)
chr6 (438-516)||(30608664-30608742)
chr6 (360-509)||(7515358-7515509)
chr6 (360-508)||(4010660-4010807)
chr6 (353-516)||(30493310-30493469)
chr6 (353-516)||(32191882-32192045)
chr6 (405-516)||(1933848-1933960)
chr6 (382-491)||(29320037-29320147)
chr6 (351-456)||(32328794-32328899)
chr6 (388-516)||(34018371-34018500)
chr6 (419-510)||(7876164-7876253)
chr6 (386-474)||(7976358-7976445)
chr6 (350-509)||(32059682-32059840)
chr6 (438-516)||(28981039-28981116)
chr6 (435-510)||(8496850-8496923)
chr6 (435-510)||(33740697-33740770)
chr6 (439-499)||(34222658-34222717)
chr6 (435-510)||(12652825-12652898)
chr6 (435-510)||(25064120-25064193)
chr6 (404-516)||(26588618-26588729)
chr6 (435-510)||(33109719-33109792)
[»] scaffold0009 (1 HSPs)
scaffold0009 (359-516)||(58230-58387)
[»] scaffold0445 (1 HSPs)
scaffold0445 (353-516)||(1119-1282)
[»] scaffold0127 (1 HSPs)
scaffold0127 (346-506)||(15260-15420)
[»] scaffold0088 (1 HSPs)
scaffold0088 (346-509)||(50554-50718)
[»] scaffold0017 (1 HSPs)
scaffold0017 (344-509)||(32905-33071)
[»] scaffold0603 (1 HSPs)
scaffold0603 (360-516)||(7500-7654)
[»] scaffold0026 (1 HSPs)
scaffold0026 (382-509)||(72021-72149)
[»] scaffold0884 (1 HSPs)
scaffold0884 (360-499)||(2138-2279)
[»] scaffold0064 (1 HSPs)
scaffold0064 (354-466)||(19238-19348)
[»] scaffold0492 (1 HSPs)
scaffold0492 (383-516)||(12721-12854)
[»] scaffold0039 (1 HSPs)
scaffold0039 (404-503)||(92926-93025)
[»] scaffold0136 (2 HSPs)
scaffold0136 (464-510)||(37933-37979)
scaffold0136 (438-516)||(10191-10269)
[»] scaffold0347 (1 HSPs)
scaffold0347 (459-508)||(5894-5943)
[»] scaffold0219 (1 HSPs)
scaffold0219 (383-494)||(15010-15122)
[»] scaffold0618 (1 HSPs)
scaffold0618 (439-509)||(7939-8007)
[»] scaffold0554 (1 HSPs)
scaffold0554 (371-516)||(10672-10815)
[»] scaffold0087 (1 HSPs)
scaffold0087 (411-471)||(25525-25585)


Alignment Details
Target: chr4 (Bit Score: 154; Significance: 2e-81; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 297 - 516
Target Start/End: Original strand, 18935529 - 18935744
Alignment:
Q  297 ttagtggcctgttaaggaaactgatatataatgtaaatgtgctaaacaatagccagccctaattttttagggagagaaactctgtcttctctctaaattt 396  Q
    |||||||||||||||||||| || |||||   |||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||| |||    
T  18935529 ttagtggcctgttaaggaaattgttatat---gtaaatgtgctaaacaatagccggccctaagtttttagtgagagaaactctgtcttctctctaagttt 18935625  T
Q  397 tctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaatta 496  Q
    |||| | ||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  18935626 tcttcctctttcgctcatcgaggaggggtgatttaaggtcaatttttgacctagaatcac-cctctgcatcttttttcccctttcttttaatctaaatta 18935724  T
Q  497 gtgattttcacatacatcaa 516  Q
    ||||||||||||||||||||    
T  18935725 gtgattttcacatacatcaa 18935744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 172 - 319
Target Start/End: Original strand, 18930338 - 18930485
Alignment:
Q  172 tagttgccttcgtggaccgtggtaacacacggaacttatggaccacatgttttaatttttaaaaattatggagaaagtgatgtgtaccaaccatttacca 271  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18930338 tagttgccttcgtggaccgtagtaacacaaggaacttatggaccacatgttttaatttttaaaaattatgcagaaagtgatgtgtaccaaccatttacca 18930437  T
Q  272 ataatgaatgaatgagaaacgttaattagtggcctgttaaggaaactg 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18930438 ataatgaatgaatgagaaacgttaattagtggcctgttaaggaaactg 18930485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 328 - 516
Target Start/End: Original strand, 27651718 - 27651906
Alignment:
Q  328 tgtaaatgtgctaaacaatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtga 427  Q
    ||||||| |||||||||||||||  |||||||||||||| |||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  27651718 tgtaaatatgctaaacaatagccgcccctaattttttagtgagagaaattctgtcttctctctaaattttcttcctctttcactcatcgaggaggggtga 27651817  T
Q  428 tttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    | | || |||||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  27651818 tgttaggtcaatttttgacctaggatcacccatctgcatcttttttcccatttctttcaatctaaataagtgattttcacatacatcaa 27651906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 18930153 - 18930280
Alignment:
Q  19 cttaaggcattagagaccaatggaacggttgacattgttagcttttcaagtttctggatagtcgaggagaaatatagttgtatggatcttcacttccttc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  18930153 cttaaggcattagagaccaatggaacggttgacattgttagcttttcaagtttctggatagtcgaggagaaatatag--gtttggatcttcacttccttc 18930250  T
Q  119 aactatcttattgcatcgtccattaaataa 148  Q
    ||||||||||||||||||||||||||||||    
T  18930251 aactatcttattgcatcgtccattaaataa 18930280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 18934821 - 18934948
Alignment:
Q  19 cttaaggcattagagaccaatggaacggttgacattgttagcttttcaagtttctggatagtcgaggagaaatatagttgtatggatcttcacttccttc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  18934821 cttaaggcattagagaccaatggaacggttgacattgttagcttttcaagtttctggatagtcgaggagaaatatag--gtttggatcttcacttccttc 18934918  T
Q  119 aactatcttattgcatcgtccattaaataa 148  Q
    ||||||||||||||||||||||||||||||    
T  18934919 aactatcttattgcatcgtccattaaataa 18934948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 18935006 - 18935128
Alignment:
Q  172 tagttgccttcgtggaccgtggtaacacacggaacttatggaccacatgttttaatttttaaaaattatggagaaagtgatgtgtaccaaccatttacca 271  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18935006 tagttgccttcgtggaccgtagtaacacaaggaacttatggaccacatgttttaatttttaaaaattatgcagaaagtgatgtgtaccaaccatttacca 18935105  T
Q  272 ataatgaatgaatgagaaacgtt 294  Q
    |||||||||||||||||||||||    
T  18935106 ataatgaatgaatgagaaacgtt 18935128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 327 - 516
Target Start/End: Original strand, 36194482 - 36194671
Alignment:
Q  327 atgtaaatgtgctaaacaatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtg 426  Q
    ||||||||||| |||| ||||| | ||| ||||||||||| |||||||| | |||||||||||||| ||||||| | |||||||| |||||||| |||||    
T  36194482 atgtaaatgtgttaaataatagtcggccttaattttttagtgagagaaattttgtcttctctctaagttttcttcctctttcacttatcgaggatgggtg 36194581  T
Q  427 atttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||| |||||||||||||||||| || ||  ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  36194582 attttagatcaatttttgacctaaaaacatccctctgcatcttttttctcctttctttcaatttaaataagtgattttcacatacatcaa 36194671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 352 - 516
Target Start/End: Original strand, 22300639 - 22300803
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||||||| |||||||||||   |||||||||||||||| |||| ||||||||| ||||||||| ||| ||| || ||| ||||||||||| |    
T  22300639 gccctagttttttagagagagaaactccaacttctctctaaattttatttctctttcactcgtcgaggaggagtggttttaggtcattttttgacctaaa 22300738  T
Q  452 atcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| ||| |||||| |||||| | ||||||||||| ||||| |||||||||||| || |||||    
T  22300739 atcacccctttgcatcctttttctcttttctttcaatttaaataagtgattttcacgtatatcaa 22300803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 352 - 509
Target Start/End: Complemental strand, 19853826 - 19853669
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||| ||| | |||||||||   |||||||||||| |||||||||| |||| |||||||||||||||| ||| || ||| |||||||||||||    
T  19853826 gccctagttttctagtgggagaaactccaacttctctctaaactttctttccccttcattcatcgaggaggggtggttttaggtca-tttttgacctaga 19853728  T
Q  452 atcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    ||||| ||||| |||||||||||||| |||||| |||||||||| |||| |||||||||    
T  19853727 atcacccctctacatcttttttccccttttcttccaatctaaataagtggttttcacat 19853669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 352 - 516
Target Start/End: Original strand, 9713695 - 9713866
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatc-------aatttttg 444  Q
    |||||| |||||||| ||||||||||||  ||||||||||| || |||||| ||||||||||||||||||||||||||| |  ||         |||||     
T  9713695 gccctagttttttagtgagagaaactctaccttctctctaagttctctttctctttcactcatcgaggaggggtgattttatgtcttttttttttttttt 9713794  T
Q  445 acctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||  |||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  9713795 acctagaatcacttctctacatcttttttcccctttctttcaatctaaataagtgatttccacatatatcaa 9713866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 359 - 509
Target Start/End: Original strand, 2520578 - 2520729
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||| ||| |||||||||||   |||||||||||| |||||||| | |||  |||||||||||||||| ||| || ||| |||||||||||||||||| |    
T  2520578 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccc 2520677  T
Q  459 ctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    |||| |||||||||||||| |||| |||||||||||| |||| |||||||||    
T  2520678 ctctacatcttttttccccttttcgttcaatctaaataagtggttttcacat 2520729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 346 - 509
Target Start/End: Original strand, 53810816 - 53810980
Alignment:
Q  346 tagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttga 445  Q
    |||||||||||| |||| ||| | |||||||||   |||||||||||| |||||| | | |||  |||||||||||||||| ||| || ||| |||||||    
T  53810816 tagccagccctagttttctagtgggagaaactccagcttctctctaaactttcttcctccttcgttcatcgaggaggggtggttttaggtcattttttga 53810915  T
Q  446 cctagaatcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    |||| |||||| ||||| ||||||||| |||| ||||||||||| ||||| ||||||||||||||    
T  53810916 cctataatcacccctctacatctttttcccccttttctttcaatttaaataagtgattttcacat 53810980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 346 - 516
Target Start/End: Complemental strand, 1621806 - 1621648
Alignment:
Q  346 tagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaaga--tcaattttt 443  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||||||||||| ||||||| |||  ||||         
T  1621806 tagccggccctaattttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgaggaggcgtgattttagagttcaa----- 1621712  T
Q  444 gacctagaatcacacctctgcatc-ttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
     ||||         |||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||    
T  1621711 -acct---------cctctgcatctttttttcccctttcattcaatctaaataagtgattttcacatacatcaa 1621648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 347 - 509
Target Start/End: Original strand, 22610973 - 22611135
Alignment:
Q  347 agccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgac 446  Q
    |||| |||||| |||||||| | |||||||||   |||||||||||| |||||||| | |||  || ||||||||||||| ||| || ||| ||||||||    
T  22610973 agccggccctagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcgtcgaggaggggtggttttaggtca-tttttgac 22611071  T
Q  447 ctagaatcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    |||||||||| | ||| |||||||||||||| ||||||||||||||||| |||| |||||||||    
T  22611072 ctagaatcacccatctacatcttttttccccttttctttcaatctaaataagtggttttcacat 22611135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 353 - 508
Target Start/End: Original strand, 35348101 - 35348256
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    ||||| |||| ||| || ||||||||   ||||||| |||| ||| |||| | ||| ||||||| ||||||||||||| || ||| ||||||||||||||    
T  35348101 ccctagttttctagtgaaagaaactccaacttctctttaaactttttttctccttcgctcatcgtggaggggtgattttaggtcattttttgacctagaa 35348200  T
Q  453 tcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||||  |||| ||||||||||||| ||||||||||||||||| |||| ||||||||    
T  35348201 tcacctctctacatcttttttcccttttctttcaatctaaataagtggttttcaca 35348256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 353 - 509
Target Start/End: Complemental strand, 4143068 - 4142912
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    ||||| |||||||| | |||||||||   ||||||| |||| |||||||| | ||   |||||||||||||||| ||| || ||| ||||||||||||||    
T  4143068 ccctagttttttagtgggagaaactccaacttctctataaactttctttctcctttgttcatcgaggaggggtggttttaggtcattttttgacctagaa 4142969  T
Q  453 tcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    |||| ||||| |||||||||||||| ||||||||||||||||| |||| |||||||||    
T  4142968 tcacccctctacatcttttttccccttttctttcaatctaaataagtg-ttttcacat 4142912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 359 - 508
Target Start/End: Complemental strand, 47320709 - 47320560
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| ||||||||||    ||||||| ||| ||||| ||| ||||| ||||||||| ||||||| ||| || ||| | |||||| || |||||||     
T  47320709 ttttttagtgagagaaacttcaacttctctttaagttttccttctctttcgctcatcgagaaggggtggttttaggtcattctttgacttaaaatcacaa 47320610  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  47320609 ctctgcatcttttttcccctttcgttcgatctaaataagtgattttcaca 47320560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 352 - 516
Target Start/End: Complemental strand, 51888531 - 51888367
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||||||  ||||||||||    ||| ||||||  ||||||||| ||||||||||||||||||||||| ||| || ||| |||||||| | ||    
T  51888531 gccctagttttttattgagagaaacttcaacttttctctacgttttctttctctttcactcatcgaggaggggtggttttaggtcattttttgacattga 51888432  T
Q  452 atcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| |||||  ||||||| ||||||||||| | |||||||  ||||||||||||||| |||||    
T  51888431 atcacccctctcaatcttttatcccctttcttccgatctaaacaagtgattttcacatatatcaa 51888367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 394 - 509
Target Start/End: Complemental strand, 22039071 - 22038958
Alignment:
Q  394 ttttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaa 493  Q
    ||||||||| ||||||||||||||| ||||||| ||| || |||||||| || |||||||||| ||| |||||||||||| ||||||||||| |||||||    
T  22039071 ttttctttctctttcactcatcgagcaggggtggttttaggtcaattttggatctagaatcac-cctttgcatctttttt-ccctttctttctatctaaa 22038974  T
Q  494 ttagtgattttcacat 509  Q
    | ||||||||||||||    
T  22038973 taagtgattttcacat 22038958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 344 - 509
Target Start/End: Complemental strand, 26633993 - 26633828
Alignment:
Q  344 aatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt 443  Q
    ||||||| | |||| |||||||| |||||||||||   |||||||||||| ||||||||   |||  |||| ||||||||||| | | || ||| |||||    
T  26633993 aatagccggtcctagttttttagtgagagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggtggtcttaggtcatttttt 26633894  T
Q  444 gacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||||||||||| ||| | ||||||||| | | ||||||||||||||||| |||| |||||||||    
T  26633893 gacctagaatcacccctatacatctttttcctcttttctttcaatctaaataagtggttttcacat 26633828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 354 - 509
Target Start/End: Complemental strand, 21686553 - 21686398
Alignment:
Q  354 cctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaat 453  Q
    |||| |||| ||| |||||||||| |  |||||||||||| |||||||| | ||   |||||||||||||||| ||| || ||  ||||||||||| |||    
T  21686553 cctagttttctagtgagagaaactttaacttctctctaaactttctttctcctttgttcatcgaggaggggtggtttgaggtct-tttttgacctaaaat 21686455  T
Q  454 cacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    ||| ||||| |||||||||||||| ||||||||||||||||| |||| |||||||||    
T  21686454 cacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacat 21686398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 360 - 509
Target Start/End: Complemental strand, 22558772 - 22558621
Alignment:
Q  360 tttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacc 459  Q
    ||||||| |||||||||||    ||||||||||| |||||||| | |||  |||| ||||||||||| ||| || ||| |||||||| |||||||||  |    
T  22558772 tttttagagagagaaactccaatttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacctc 22558673  T
Q  460 tctgcatcttttttcccc--tttctttcaatctaaattagtgattttcacat 509  Q
    ||| ||||||||||||||  ||||||||||||||||| |||| |||||||||    
T  22558672 tctacatcttttttcccctttttctttcaatctaaataagtggttttcacat 22558621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 358 - 516
Target Start/End: Complemental strand, 26091222 - 26091064
Alignment:
Q  358 attttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcaca 457  Q
    ||||||||| |||||||||||   ||||||||||||  ||||||| | |||| |||||||||| | ||||||| || | | ||||||||||||||||||     
T  26091222 attttttagtgagagaaactccaacttctctctaaaccttctttctccttcattcatcgaggatgagtgattttaggttattttttgacctagaatcacc 26091123  T
Q  458 cctctgcatcttttttc-ccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||  |||||||||| || ||| ||||||||||||| |||| |||||||||| |||||    
T  26091122 cctct-aatcttttttctccttttatttcaatctaaataagtggttttcacataaatcaa 26091064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 359 - 515
Target Start/End: Original strand, 9643178 - 9643338
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggagggg-tgatttaagatcaatttttgacctagaatcaca 457  Q
    |||||||| |||||||||||   ||||||||||| ||||||||  ||||  |||||||| |||||| || ||| |  ||| ||||||||||||||||||     
T  9643178 ttttttagtgagagaaactccaacttctctctaagttttctttatcttttgctcatcgaagagggggtggttttatgtcattttttgacctagaatcact 9643277  T
Q  458 cctctgcatctttttt---cccctttctttcaatctaaattagtgattttcacatacatca 515  Q
    | ||||||||||||||   ||| |||||||| |||||||| ||||||||||||||| ||||    
T  9643278 catctgcatctttttttttcccatttctttcgatctaaataagtgattttcacatatatca 9643338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 352 - 509
Target Start/End: Original strand, 13633908 - 13634067
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||| ||| |||||||||||   |||||||||||| |||||||| | ||| |||||||||||| |||| ||| || || ||||||||| ||||    
T  13633908 gccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgctcatcgaggagtggtggttttaggtc-atttttgacataga 13634006  T
Q  452 atcacacctctgcatcttttttcccc---tttctttcaatctaaattagtgattttcacat 509  Q
    ||||| ||||| ||||||||  ||||   ||||||||||||||||| |||| |||||||||    
T  13634007 atcacccctctacatcttttccccccccttttctttcaatctaaataagtggttttcacat 13634067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 407 - 516
Target Start/End: Original strand, 36161563 - 36161670
Alignment:
Q  407 tcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttca 506  Q
    ||||||||||||||| |||| ||| || ||| |||||||||||||||||| | ||||||  ||||||||| ||||||||||||||||| ||||||||| |    
T  36161563 tcactcatcgaggagaggtggttttaggtcattttttgacctagaatcacccatctgca--ttttttcccatttctttcaatctaaataagtgattttta 36161660  T
Q  507 catacatcaa 516  Q
    |||| |||||    
T  36161661 catatatcaa 36161670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 383 - 510
Target Start/End: Original strand, 9178182 - 9178310
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttt-tcccctttc 481  Q
    ||||||||||| |||||||| | |||| ||||| |||||||||| | | || ||| |||||||||||||||||| | ||| ||||||||| |||| ||||    
T  9178182 ttctctctaaaatttctttctccttcattcatcaaggaggggtggtcttaggtcattttttgacctagaatcacccttctacatctttttctcccttttc 9178281  T
Q  482 tttcaatctaaattagtgattttcacata 510  Q
    ||||||||||||| | || ||||||||||    
T  9178282 tttcaatctaaataaatggttttcacata 9178310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 360 - 499
Target Start/End: Complemental strand, 22064087 - 22063948
Alignment:
Q  360 tttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacc 459  Q
    ||||||| ||||||||||    ||||||||||| ||  |||||  ||||||||||| |||| |  | |||| || ||| |||||||||||||||||| ||    
T  22064087 tttttagtgagagaaacttcaccttctctctaagttcgctttctatttcactcatcaaggatgactaattttaggtcattttttgacctagaatcacccc 22063988  T
Q  460 tctgcatcttttttcccctttctttcaatctaaattagtg 499  Q
    ||||||| ||||||| ||||||||||||||||||| ||||    
T  22063987 tctgcatattttttctcctttctttcaatctaaataagtg 22063948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 368 - 510
Target Start/End: Complemental strand, 9165342 - 9165198
Alignment:
Q  368 gagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatca-atttttgacctagaatcacacctctgcat 466  Q
    |||||||||||   |||||||||||| |||||||  |  ||| ||||||||||| |||| ||| || ||| |||||| |||||||||||| ||||| |||    
T  9165342 gagagaaactccaacttctctctaaactttctttttccatcattcatcgaggagaggtggttttaggtcatattttttacctagaatcacccctctacat 9165243  T
Q  467 cttttttcccctt-tctttcaatctaaattagtgattttcacata 510  Q
    ||||||  ||||| ||||||||||||||| |||| ||||||||||    
T  9165242 ctttttctcccttatctttcaatctaaataagtggttttcacata 9165198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 411 - 509
Target Start/End: Complemental strand, 24099327 - 24099227
Alignment:
Q  411 tcatcgaggaggggtgatttaagatcaattttt-gacctagaatcacacctctgcatcttttttccccttt-ctttcaatctaaattagtgattttcaca 508  Q
    ||||||||||| |||| ||| || ||| ||||| ||||||||||||  ||||| ||||||||||||||||| |||||||||||||| |||||||||||||    
T  24099327 tcatcgaggagaggtggttttaggtcatttttttgacctagaatcatccctctacatcttttttccccttttctttcaatctaaataagtgattttcaca 24099228  T
Q  509 t 509  Q
    |    
T  24099227 t 24099227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 508
Target Start/End: Original strand, 10496143 - 10496292
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||| ||| |||||||||||   ||||| |||||| |||||| | | |||  |||||||||||| ||| ||| || |||||||||||||||||||||| |    
T  10496143 ttttctagtgagagaaactccaacttctttctaaactttcttactccttcgttcatcgaggaggtgtggttttaggtcaatttttgacctagaatcac-c 10496241  T
Q  459 ctctgcatcttttttccc-ctttctttcaatctaaattagtgattttcaca 508  Q
    || | |||||||||||||  ||||||| ||||||||| |||| ||||||||    
T  10496242 ctatacatcttttttcccattttcttttaatctaaataagtggttttcaca 10496292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 358 - 516
Target Start/End: Complemental strand, 36204689 - 36204532
Alignment:
Q  358 attttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcaca 457  Q
    ||||||||| ||||| |||||   ||||||||||  ||||||||| |||||| ||||| |||| || || ||| || ||| ||||| ||||||||||||     
T  36204689 attttttagtgagaggaactccaccttctctctaggttttctttctctttcaatcatcaaggatggatggttttaggtcatttttt-acctagaatcacc 36204591  T
Q  458 cctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||| || |||||  |||||||| || ||||| |||||||| |||||| |||||    
T  36204590 cctctgcattttgtttcctttttctttcgatttaaataagtgatttccacatagatcaa 36204532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 509
Target Start/End: Original strand, 32766377 - 32766466
Alignment:
Q  421 ggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    |||||| ||| || ||| |||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| | |||| |||||||||    
T  32766377 ggggtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttttctttcaatctaagtaagtgtttttcacat 32766466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 439 - 509
Target Start/End: Complemental strand, 56040873 - 56040801
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccct--ttctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||||||||| ||||| |||||||||||||||  |||||||||||||||| |||| |||||||||    
T  56040873 tttttgacctagaatcacccctctacatcttttttccccttcttctttcaatctaaataagtggttttcacat 56040801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 516
Target Start/End: Original strand, 5119162 - 5119298
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttg-acctagaatcacacctctgcatcttttttcccct-t 479  Q
    ||||| |||||| ||| |||| | |||| ||||| |||||||||| ||| |  ||| |||||  |||||||||||| ||||| ||||||||| ||||| |    
T  5119162 cttctttctaaactttatttctccttcattcatcaaggaggggtggttttatgtcattttttttacctagaatcacccctctacatctttttccccctct 5119261  T
Q  480 tctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||||| |||| |||||||||| |||||    
T  5119262 tctttcaatctaaataagtggttttcacatatatcaa 5119298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 494
Target Start/End: Complemental strand, 42032835 - 42032700
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt-gacctagaatcaca 457  Q
    |||||||| ||||||||| ||  ||||||||||| |||||||||  ||||||||||||| |||| ||| ||| || | | ||||| || ||||||||||     
T  42032835 ttttttagtgagagaaaccctaccttctctctaagttttctttct-tttcactcatcgaagaggagtggttttaggttatttttttgatctagaatcacc 42032737  T
Q  458 cctctgcatcttttttcccctttctttcaatctaaat 494  Q
     |||| |||||||| |||||||||||||| |||||||    
T  42032736 tctcttcatcttttatcccctttctttcattctaaat 42032700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 509
Target Start/End: Original strand, 43510023 - 43510151
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatc-ttttttccccttt 480  Q
    ||||||| |||| |||| ||| | |||  ||||||| || ||||| ||| || ||| |||||||||||||||||| ||||| |||| ||||||||| |||    
T  43510023 cttctctttaaactttcattctccttcgttcatcgaagaagggtggttttaggtcattttttgacctagaatcactcctctacatctttttttccctttt 43510122  T
Q  481 ctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||||| ||||  ||||||||    
T  43510123 ctttcaatctaaataagtggctttcacat 43510151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 356 - 510
Target Start/End: Original strand, 28857180 - 28857331
Alignment:
Q  356 taattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatca 455  Q
    |||||||||||||| ||||||||   ||||||||||| ||||||||| |||||||||  |||||||||||  |||| |   | ||||||||||| |||||    
T  28857180 taattttttagggacagaaactcaaacttctctctaagttttctttcactttcactctgcgaggaggggt-ttttatg--tattttttgacctataatca 28857276  T
Q  456 cacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    | | |||| ||| |||||| | || ||||||||| |||| |||||||| ||||||    
T  28857277 cccatctgtatcctttttctctttcctttcaatccaaataagtgatttccacata 28857331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 356 - 430
Target Start/End: Complemental strand, 31891578 - 31891504
Alignment:
Q  356 taattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgattt 430  Q
    ||||||||||| ||| |||||| |||||||||||||| ||||||| | ||||||||||| || ||||||||||||    
T  31891578 taattttttagtgagtgaaactttgtcttctctctaagttttcttcctctttcactcattgaagaggggtgattt 31891504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 383 - 510
Target Start/End: Original strand, 54021686 - 54021814
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcc-cctttc 481  Q
    ||||||||||| ||||||||   |||| |||||||||  | ||| ||| || ||| |||||||| || |||||  ||||| |||||||||||| | ||||    
T  54021686 ttctctctaaactttctttcttcttcattcatcgagggagagtggttttaggtcattttttgacataaaatcatccctctacatcttttttcctcttttc 54021785  T
Q  482 tttcaatctaaattagtgattttcacata 510  Q
    ||||||||||||| |||| ||||||||||    
T  54021786 tttcaatctaaataagtggttttcacata 54021814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 439 - 510
Target Start/End: Original strand, 52944193 - 52944264
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||||| ||| |||||  |||||| ||| |||||||| ||||||||||||||||| |||||||||||||||    
T  52944193 tttttgatctaaaatcatccctctgtatcatttttcccttttctttcaatctaaataagtgattttcacata 52944264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 382 - 510
Target Start/End: Original strand, 18048715 - 18048838
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttc 481  Q
    ||||||| ||| ||||||||| ||||| ||| |||||||| |||  |||| | |   |||||||||||||||||| |||  ||||||||||||||| |||    
T  18048715 cttctctttaagttttctttctctttcgctcgtcgaggagtggt--tttaggttatttttttgacctagaatcacccct--gcatcttttttcccc-ttc 18048809  T
Q  482 tttcaatctaaattagtgattttcacata 510  Q
    ||||||| ||||| |||||||| ||||||    
T  18048810 tttcaatttaaataagtgatttccacata 18048838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 514
Target Start/End: Complemental strand, 18139121 - 18139027
Alignment:
Q  419 gaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtga-ttttcacatacatc 514  Q
    |||||||||||| || | |||||||||||| ||||||||||||| |||| ||||  | || | ||||||||||||| ||||| ||||||||||||||    
T  18139121 gaggggtgattttaggtaaatttttgacctggaatcacacctcttcatcatttt--ctctctatttcaatctaaataagtgatttttcacatacatc 18139027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 451 - 500
Target Start/End: Complemental strand, 21223496 - 21223447
Alignment:
Q  451 aatcacacctctgcatcttttttcccctttctttcaatctaaattagtga 500  Q
    ||||||| |||||||||||||||||||||||||||| ||||||| |||||    
T  21223496 aatcacatctctgcatcttttttcccctttctttcattctaaataagtga 21223447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 514
Target Start/End: Complemental strand, 49126334 - 49126240
Alignment:
Q  419 gaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtga-ttttcacatacatc 514  Q
    |||||||||||| || | |||||||||||| ||||||||||||| |||| ||||  | || | ||||||||||||| ||||| ||||||||||||||    
T  49126334 gaggggtgattttaggtaaatttttgacctggaatcacacctcttcatcatttt--ctctctatttcaatctaaataagtgatttttcacatacatc 49126240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 460 - 511
Target Start/End: Complemental strand, 31891495 - 31891444
Alignment:
Q  460 tctgcatcttttttcccctttctttcaatctaaattagtgattttcacatac 511  Q
    |||| ||||||||| |||||||||||||||||||| ||||||||| ||||||    
T  31891495 tctgtatctttttttccctttctttcaatctaaataagtgatttttacatac 31891444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 516
Target Start/End: Complemental strand, 7009229 - 7009124
Alignment:
Q  410 ctcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||||||| ||  ||| ||| ||||||| ||||| |||||||||||  ||| | |||||||||||| |||||||| |||| ||| | |||||| |||||    
T  7009229 ctcatcgagaagatgtggttttagatcaacttttggcctagaatcacctctccgaatcttttttcccttttctttcgatct-aataactgatttccacat 7009131  T
Q  510 acatcaa 516  Q
    |||||||    
T  7009130 acatcaa 7009124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 425 - 494
Target Start/End: Original strand, 21223628 - 21223697
Alignment:
Q  425 tgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaat 494  Q
    |||||| || ||| ||||||| ||| ||||||| |||| ||||||||| ||||||||||||| |||||||    
T  21223628 tgattttaggtcagtttttgatctaaaatcacatctctccatctttttccccctttctttcattctaaat 21223697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 439 - 508
Target Start/End: Original strand, 37030145 - 37030214
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||||| || ||||||||| ||| |||||||||| || ||||||||||||| ||||| | |||||||||||    
T  37030145 ttttttacttagaatcacccctttgcatcttttctctcctttctttcaatttaaataaatgattttcaca 37030214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 444 - 515
Target Start/End: Original strand, 9634560 - 9634632
Alignment:
Q  444 gacctagaatcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacatacatca 515  Q
    ||||||||||||  | |||||||||||||| | | |||||||| |||||||| ||||||||||||||| ||||    
T  9634560 gacctagaatcatccatctgcatctttttttctcatttctttcgatctaaataagtgattttcacatatatca 9634632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 419 - 510
Target Start/End: Original strand, 47416765 - 47416854
Alignment:
Q  419 gaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||||||||||  | |||||| ||||| |  |||||| ||||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  47416765 gaggggtgattttgggtcaattattgacttgaaatcacccctcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 47416854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 494
Target Start/End: Complemental strand, 21225403 - 21225348
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaat 494  Q
    ||||||| ||| ||||||  |||| ||||||||||||||||||||||| |||||||    
T  21225403 tttttgatctaaaatcacctctctccatcttttttcccctttctttcattctaaat 21225348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 494
Target Start/End: Original strand, 21231772 - 21231815
Alignment:
Q  451 aatcacacctctgcatcttttttcccctttctttcaatctaaat 494  Q
    ||||||| |||| ||||||||||||||||||||||| |||||||    
T  21231772 aatcacatctctccatcttttttcccctttctttcattctaaat 21231815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 494
Target Start/End: Original strand, 51535082 - 51535192
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttct 482  Q
    |||||||||| || |||||| |||||| ||||| | ||||| || ||| | || ||||||||||||||||||||  |||||| || |||||  | |||||    
T  51535082 ttctctctaagttctctttctctttcaatcatcaaagagggatggttttaaat-aatttttgacctagaatcacctctctgcgtcatttttttcttttct 51535180  T
Q  483 ttcaatctaaat 494  Q
    |||| |||||||    
T  51535181 ttcattctaaat 51535192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 419 - 509
Target Start/End: Original strand, 3673612 - 3673702
Alignment:
Q  419 gaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||||||||||| | |||||||||||||   |||||| |||||  ||| |||||| |||| ||||  || ||||| ||||||||||||||    
T  3673612 gaggggtgatttagggtcaatttttgaccccaaatcacccctctaaatcgtttttctccttcctttttatttaaataagtgattttcacat 3673702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 438 - 488
Target Start/End: Complemental strand, 12199920 - 12199871
Alignment:
Q  438 atttttgacctagaatcacacctctgcatcttttttcccctttctttcaat 488  Q
    ||||||||| ||||||||| | ||||||||| |||||||||||||||||||    
T  12199920 atttttgacatagaatcacccatctgcatct-ttttcccctttctttcaat 12199871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 516
Target Start/End: Original strand, 47158074 - 47158186
Alignment:
Q  404 ctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttccc-ctttctttcaatctaaattagtgatt 502  Q
    |||||||||||||| || || |||||| |  ||| ||||| || ||||||||| | | ||||||||||||  | |||||||||||| ||||| |||||||    
T  47158074 ctttcactcatcgatgatggatgattttacgtcatttttt-acttagaatcactcatttgcatcttttttttcactttctttcaatttaaataagtgatt 47158172  T
Q  503 ttcacatacatcaa 516  Q
    | |||||| |||||    
T  47158173 tccacatatatcaa 47158186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Complemental strand, 9529070 - 9528997
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||  |||||| |||||  ||||||||  | |||| ||||||||||||| |||||||||||||||    
T  9529070 tcaattcttgacctgaaatcacccctctttatcttttt--ctctttatttcaatctaaataagtgattttcacata 9528997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 504
Target Start/End: Original strand, 12265338 - 12265419
Alignment:
Q  421 ggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgatttt 504  Q
    ||||||||||  | ||||||||||||||  |||||| ||||| |||||||||  |||  | ||||||||||||| |||||||||    
T  12265338 ggggtgatttttggtcaatttttgacctgaaatcacccctcttcatctttttatccc--tatttcaatctaaataagtgatttt 12265419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 510
Target Start/End: Complemental strand, 34024644 - 34024555
Alignment:
Q  419 gaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||||| |||  |||||||| |||||||  |||||| ||||| |||||||||  | || | ||||||||||||| ||| |||||||||||    
T  34024644 gaggggtggttttggatcaattcttgacctgaaatcacccctcttcatcttttt--ctctctatttcaatctaaataagttattttcacata 34024555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 516
Target Start/End: Complemental strand, 35395882 - 35395826
Alignment:
Q  460 tctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||||| | ||||||| ||| ||||| |||||||||||  ||||||||    
T  35395882 tctgcatcttttttctcttttcttttaatgtaaataagtgattttcatgtacatcaa 35395826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 43444290 - 43444363
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||||||||| ||  |||||| | ||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  43444290 tcaatttttgatctgaaatcacccatcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 43444363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 353 - 469
Target Start/End: Complemental strand, 48257763 - 48257647
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    ||||| |||| ||| |||| ||||||   ||||||| |||| |||||||| | |||   ||||||||||||||| ||| |  ||| ||||||||||||||    
T  48257763 ccctagttttctagtgagaaaaactccaacttctctttaaactttctttctcattcgtacatcgaggaggggtggttttatgtcattttttgacctagaa 48257664  T
Q  453 tcacacctctgcatctt 469  Q
    |||| | ||| ||||||    
T  48257663 tcacccatctacatctt 48257647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 476 - 516
Target Start/End: Original strand, 52978743 - 52978783
Alignment:
Q  476 cctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| ||||||||||||| ||||||||||||||| |||||    
T  52978743 cctttatttcaatctaaataagtgattttcacatatatcaa 52978783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 3e-59; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 352 - 516
Target Start/End: Original strand, 39567069 - 39567233
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    ||||||||||||||| ||||||||| | ||||||||| ||| ||||||| | ||||||||||||||||||||||||||| || |||||||||||||||||    
T  39567069 gccctaattttttagtgagagaaacaccgtcttctctttaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctaga 39567168  T
Q  452 atcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  39567169 atcacgcctctgcatctttttccccctttctttcaatctaaataagtgattttcacatacatcaa 39567233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 343 - 516
Target Start/End: Original strand, 14210998 - 14211168
Alignment:
Q  343 caatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttt 442  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||||||||| ||||||||| || ||||||||    
T  14210998 caatagccaaacctaattttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgagga-gggtgattttaggtcaatttt 14211096  T
Q  443 tgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||||| |||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||    
T  14211097 tgacctagaatcacccctctgcatcttttt--ccctttctttcaatctaaataagtgattttcacatacatcaa 14211168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 340 - 516
Target Start/End: Complemental strand, 28541233 - 28541063
Alignment:
Q  340 aaacaatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaat 439  Q
    ||||||||| | |||||| |||||||| |||||||||||| |||||||||||| ||||||| | |||||||||||||||| |||||||||| || |||||    
T  28541233 aaacaatagtctgccctatttttttagtgagagaaactctttcttctctctaagttttcttcctctttcactcatcgaggtggggtgattttaggtcaat 28541134  T
Q  440 ttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||      |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28541133 ttttgacctag------acctctgcatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaa 28541063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 387 - 516
Target Start/End: Complemental strand, 2979592 - 2979463
Alignment:
Q  387 ctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttca 486  Q
    |||||| ||||||| | ||||||||||||||||||||||||||| || ||||||||||||||| |||||| |||||||||||||||||| ||||||||||    
T  2979592 ctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctataatcacccctctgcatcttttttcctctttctttca 2979493  T
Q  487 atctaaattagtgattttcacatacatcaa 516  Q
    |||||||| |||||||||||||||||||||    
T  2979492 atctaaataagtgattttcacatacatcaa 2979463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 344 - 509
Target Start/End: Original strand, 38597563 - 38597728
Alignment:
Q  344 aatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt 443  Q
    ||||||| |||||| |||| ||| |||||||||||   |||||||||||| |||||||| | |||  |||||||||||||||| ||| || | | |||||    
T  38597563 aatagccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggttatttttt 38597662  T
Q  444 gacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||||||||||| ||||| |||||||||||||  |||||||||| ||||| ||||||||||||||    
T  38597663 gacctagaatcacccctctacatcttttttccctattctttcaatttaaataagtgattttcacat 38597728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 370 - 509
Target Start/End: Complemental strand, 9114022 - 9113882
Alignment:
Q  370 gagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatctt 469  Q
    ||||||||||  |||||||||||| |||||||| |||||  |||||||||||||||||||| || ||| ||||| |||||||||||| ||||| ||||||    
T  9114022 gagaaactctaacttctctctaaactttctttctctttcgttcatcgaggaggggtgattttaggtcattttttaacctagaatcacccctctacatctt 9113923  T
Q  470 ttttccc-ctttctttcaatctaaattagtgattttcacat 509  Q
    |||||||  ||||||| ||||||||| |||| |||||||||    
T  9113922 ttttcccattttcttttaatctaaataagtggttttcacat 9113882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 344 - 516
Target Start/End: Original strand, 7035993 - 7036166
Alignment:
Q  344 aatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt 443  Q
    ||||||| |||||| |||| ||| |||||||||||   |||||||||||| |||||||| | |||| ||||| ||| |||||| ||| || ||| |||||    
T  7035993 aatagccggccctagttttctagtgagagaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggtggttttaggtcatttttt 7036092  T
Q  444 gacctagaatcacacctctgcatcttttttcc-cctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||| |||||| | ||| |||||||||||| | ||||||||||||||||| |||| |||||||||| |||||    
T  7036093 gacctaaaatcactcatctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatcaa 7036166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 346 - 509
Target Start/End: Original strand, 13006996 - 13007160
Alignment:
Q  346 tagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttga 445  Q
    ||||| |||||| |||||||| | |||||||||   |||||||||||| |||||||| | |||  ||||||||||| |||| ||| || ||| |||||||    
T  13006996 tagccggccctagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagaggtggttttaggtcattttttga 13007095  T
Q  446 cctagaatcacacctctgcatcttttttccc-ctttctttcaatctaaattagtgattttcacat 509  Q
    ||||||||||| ||||| || ||||||||||  ||||||||||||||||| |||| |||||||||    
T  13007096 cctagaatcacccctctacaccttttttcccattttctttcaatctaaataagtggttttcacat 13007160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 352 - 516
Target Start/End: Complemental strand, 11977252 - 11977087
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttg-acctag 450  Q
    |||||| |||| ||| ||||||||||||  |||||||||||| |||||||| | |||  |||||||| ||||||| ||| ||||   |||||  ||||||    
T  11977252 gccctagttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgagaaggggtggttttagatttttttttttacctag 11977153  T
Q  451 aatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| |||||  ||||||||||||| ||||||||||||||||| |||| |||||||||| |||||    
T  11977152 aatcaaacctcgacatcttttttcccttttctttcaatctaaataagtggttttcacatatatcaa 11977087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 368 - 508
Target Start/End: Original strand, 38007147 - 38007286
Alignment:
Q  368 gagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatc 467  Q
    |||||||||||  ||||||||||||| |||||||| | |||  |||||||||||||||| ||| || ||| |||||||||| ||||||| ||||| ||||    
T  38007147 gagagaaactcaatcttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctcgaatcacccctctacatc 38007246  T
Q  468 ttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
     |||||||| ||||||||||| ||||| |||| ||||||||    
T  38007247 -tttttcccttttctttcaatttaaataagtggttttcaca 38007286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 346 - 507
Target Start/End: Complemental strand, 6012459 - 6012297
Alignment:
Q  346 tagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttga 445  Q
    ||||| |||| | |||||||| | |||||||||   |||||||||||| |||||||| | |||  |||| ||||||||||| ||| || ||| |||||||    
T  6012459 tagccggccccagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttga 6012360  T
Q  446 cctagaatcacacctctgcatc-ttttttcccctttctttcaatctaaattagtgattttcac 507  Q
    | ||||||||| ||||| |||| ||||||||| ||||||||||||||||| |||| |||||||    
T  6012359 catagaatcacccctctacatctttttttcccttttctttcaatctaaataagtgtttttcac 6012297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 440 - 516
Target Start/End: Complemental strand, 19103700 - 19103624
Alignment:
Q  440 ttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||| ||| |||||||| |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  19103700 ttttcaccaagaatcacccctcagcatcttttttcccctttctttcgatctaaataagtgattttcacatacatcaa 19103624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 382 - 516
Target Start/End: Complemental strand, 26878363 - 26878229
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttccccttt- 480  Q
    |||||||||||| |||||||| | |||| ||||||||||| |||| ||| |  ||| ||||||| ||||||||||  |||| ||||||||| |||||||     
T  26878363 cttctctctaaactttctttctccttcattcatcgaggagaggtggttttatgtca-tttttgatctagaatcacctctctacatctttttccccctttt 26878265  T
Q  481 ctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||||| |||| |||||||||| |||||    
T  26878264 ctttcaatctaaataagtggttttcacataaatcaa 26878229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 383 - 509
Target Start/End: Original strand, 34945226 - 34945353
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccc-tttc 481  Q
    ||||||||||| |||||||| | |||  ||||||| || || || ||| || ||| |||||||||||||||||| | ||| |||||||||||||| ||||    
T  34945226 ttctctctaaactttctttctccttcgttcatcgaagaaggatggttttaggtcattttttgacctagaatcacccttctacatcttttttccccttttc 34945325  T
Q  482 tttcaatctaaattagtgattttcacat 509  Q
    ||||||||||||| |||| |||||||||    
T  34945326 tttcaatctaaataagtggttttcacat 34945353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 382 - 509
Target Start/End: Complemental strand, 31392042 - 31391913
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttt-tcccc-tt 479  Q
    |||||||||||| |||||||| |  ||  |||||||||||||||| ||| || ||| |||||||||||||||||| ||||| ||||||||| ||||| ||    
T  31392042 cttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttctccccttt 31391943  T
Q  480 tctttcaatctaaattagtgattttcacat 509  Q
    ||  ||||||||||| |||| |||||||||    
T  31391942 tcgatcaatctaaataagtggttttcacat 31391913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 507
Target Start/End: Original strand, 26825233 - 26825360
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt--gacctagaatcacacctctgcatcttttttcccc-tt 479  Q
    ||||||||||| |||||||| | |||  |||||||||||||||| ||| || ||  |||||  |||||||||||||  |||| |||||||||||||| ||    
T  26825233 ttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttggacctagaatcaccactctacatcttttttccccttt 26825332  T
Q  480 tctttcaatctaaattagtgattttcac 507  Q
    ||||||||||||||| |||| |||||||    
T  26825333 tctttcaatctaaataagtggttttcac 26825360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 438 - 516
Target Start/End: Complemental strand, 8096726 - 8096648
Alignment:
Q  438 atttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||||||||| |||||   ||||||||||| ||||||||||||||||| |||| |||||||||| |||||    
T  8096726 atttttgacctagaatcacccctctatttcttttttcccttttctttcaatctaaataagtggttttcacatatatcaa 8096648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 404 - 508
Target Start/End: Complemental strand, 8088474 - 8088371
Alignment:
Q  404 ctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattt 503  Q
    ||||||||||| ||| ||||||||||| |||||| | ||||||||  | ||||  ||||||||||||||| | ||||||||| |||||||| ||||||||    
T  8088474 ctttcactcattgagaaggggtgattttagatcattctttgacctgaagtcacctctctgcatctttttt-ctctttctttcgatctaaataagtgattt 8088376  T
Q  504 tcaca 508  Q
    |||||    
T  8088375 tcaca 8088371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 516
Target Start/End: Complemental strand, 8985258 - 8985083
Alignment:
Q  346 tagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatt-----taagatcaatt 440  Q
    ||||| ||||||  ||||||| |||||||||||   ||||||||||| ||||| ||| ||||||||| |  |||||||||||||     | || ||| ||    
T  8985258 tagccggccctagctttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtttaggaggggtgattttaggttaggtcattt 8985159  T
Q  441 tttgacctagaatcacacctctgcatcttttttcccctttctttcaatct-aaattagtgattttcacatacatcaa 516  Q
    ||||| ||| |||||| |||||||||| |||||||  ||||||||||||| |||| |||||||| |||||| |||||    
T  8985158 tttgatctaaaatcac-cctctgcatcctttttccattttctttcaatctaaaataagtgatttccacatatatcaa 8985083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 411 - 509
Target Start/End: Original strand, 10722605 - 10722705
Alignment:
Q  411 tcatcgaggaggggtgatttaagatcaattttt-gacctagaatcacacc-tctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||||||||||| |||| ||| || ||| ||||| ||||||||||||| || ||| |||||||||||| |||||||||||||||||| |||| ||||||||    
T  10722605 tcatcgaggagaggtggttttaggtcatttttttgacctagaatcaccccctctacatcttttttcctctttctttcaatctaaataagtgtttttcaca 10722704  T
Q  509 t 509  Q
    |    
T  10722705 t 10722705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 343 - 516
Target Start/End: Original strand, 7929963 - 7930133
Alignment:
Q  343 caatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttt 442  Q
    |||||||| || ||| |||| ||| |||||||||||    ||||||||||| |||||||| | ||||    || |||||||||||||| || ||||||||    
T  7929963 caatagcctgctctagttttctagtgagagaaactccaaattctctctaaactttctttctccttca----tcaaggaggggtgattttaggtcaatttt 7930058  T
Q  443 tgacctagaatcacacctctgcatcttttt---tcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||||| ||| |||||| ||||   || | ||||||| ||||||||  |||| |||||||||| |||||    
T  7930059 tgacctagaatcacccctgtgcatcattttctctctcttttcttttaatctaaa--agtggttttcacatatatcaa 7930133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 352 - 509
Target Start/End: Original strand, 25979931 - 25980089
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||| ||| ||| |||||||   |||||||||||| |||||||| | |||  |||||||||| ||||| ||| || ||| |||||||||| ||    
T  25979931 gccctagttttctagtgagcgaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtggtttcaggtcattttttgacctgga 25980030  T
Q  452 atcacacctctgcatcttttttccccttt-ctttcaatctaaattagtgattttcacat 509  Q
    || || | ||| |||||||||||||||||  |||||| |||||| |||| |||| ||||    
T  25980031 attacccttctacatcttttttcccctttgttttcaacctaaataagtggttttaacat 25980089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 382 - 516
Target Start/End: Complemental strand, 10332837 - 10332702
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcc--cctt 479  Q
    ||||||| ||| ||||||||| ||||||||| ||||  ||||  | |||||| ||| |||||||  ||||||||||||||||||||||||||    | ||    
T  10332837 cttctctataagttttctttctctttcactcgtcgaacagggtggttttaag-tcattttttgatttagaatcacacctctgcatcttttttttatcttt 10332739  T
Q  480 tctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||||| |||||||| || ||| |||||    
T  10332738 tctttcaatctaaataagtgatttccatatatatcaa 10332702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 353 - 516
Target Start/End: Original strand, 15571260 - 15571424
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt-gacctaga 451  Q
    ||||| |||| ||| ||||||||||||  |||||||| ||  |||||||| | |||| |||||||||||   || ||| |  ||| ||||| ||||||||    
T  15571260 ccctagttttctagtgagagaaactctaacttctctccaagctttctttctccttcattcatcgaggagaaatggttttatgtcatttttttgacctaga 15571359  T
Q  452 atcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||  | ||  ||||||||||| | ||||||||||||||||| |||| |||||||||| |||||    
T  15571360 atcatccatcaacatcttttttctcatttctttcaatctaaataagtggttttcacatatatcaa 15571424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 510
Target Start/End: Original strand, 10649325 - 10649414
Alignment:
Q  419 gaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||||||||||  | |||||| |||||||  |||||| ||||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  10649325 gaggggtgattttgggtcaattcttgacctgaaatcacccctcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 10649414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 442 - 510
Target Start/End: Complemental strand, 2058023 - 2057957
Alignment:
Q  442 ttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||||| |||||| ||||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  2058023 ttgacctaaaatcacccctcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 2057957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 445 - 509
Target Start/End: Complemental strand, 24230006 - 24229942
Alignment:
Q  445 acctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||| |||||| ||||| ||| ||||| ||  ||||||||||||||||| ||||||||||||||    
T  24230006 acctaaaatcacccctctacatatttttccctttttctttcaatctaaataagtgattttcacat 24229942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 30371612 - 30371685
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||| ||||||||  |||||| ||||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  30371612 tcaatatttgacctgaaatcacccctcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 30371685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 516
Target Start/End: Original strand, 6216698 - 6216837
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttccc----- 476  Q
    |||||||||||| ||| |||| | |||  |||||||||| ||||| ||| || ||| | ||||||||| |||||  | ||| ||| | |||||||         
T  6216698 cttctctctaaactttatttctcattcgttcatcgaggatgggtggttttaggtcattctttgacctaaaatcatccatctacatttgttttcccctttg 6216797  T
Q  477 ctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||||||||| |||| |||||||||| |||||    
T  6216798 ctttctttcaatctaaataagtggttttcacatatatcaa 6216837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 516
Target Start/End: Original strand, 41749100 - 41749260
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccc--tttcactcatcgaggaggggtgatttaagatcaattttt--gacctagaatc 454  Q
    |||||||| |||||||||||| |||||| ||||| || ||||||||  || | ||||||||||||||||| ||| |  ||| |||||   || || ||||    
T  41749100 ttttttagtgagagaaactctatcttctttctaagttctctttcccctttgctctcatcgaggaggggtggttttaagtcatttttttaaacttaaaatc 41749199  T
Q  455 acacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |   | ||||||||||||| || ||||||| ||||||||| |||  |||||||||| |||||    
T  41749200 atttcactgcatctttttt-ccatttcttttaatctaaataagttgttttcacatatatcaa 41749260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 440
Target Start/End: Complemental strand, 19103886 - 19103810
Alignment:
Q  363 ttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatt 440  Q
    |||| ||||||||||||||||||| | ||| || | || | |||||||||||||||||| |||||||| || ||||||    
T  19103886 ttagtgagagaaactctgtcttcttt-taagttgttttcctctttcactcatcgaggagaggtgattttaggtcaatt 19103810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 354 - 414
Target Start/End: Original strand, 14664152 - 14664212
Alignment:
Q  354 cctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcat 414  Q
    |||| |||||||| ||||||||||   ||||||||||||||| ||||||  ||||||||||    
T  14664152 cctagttttttagtgagagaaacttcatcttctctctaaattatctttctttttcactcat 14664212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 26578137 - 26578210
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||  |||||| | ||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  26578137 tcaattcttgacctgaaatcactcatcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 26578210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 438 - 494
Target Start/End: Original strand, 41630364 - 41630418
Alignment:
Q  438 atttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaat 494  Q
    ||||||||||||||||||| | ||| ||||||||| ||| |||||||||||||||||    
T  41630364 atttttgacctagaatcactc-tctacatcttttt-cccatttctttcaatctaaat 41630418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 353 - 516
Target Start/End: Complemental strand, 1988 - 1825
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||| | |||||||| |||||||||||||||| | || ||||||||||||||||||    
T  1988 ccctaattttttagtgagagaaactctgtcttctctctacgttttcttcctctttcacttatcgaggaggggtgatattaggtcaatttttgacctagaa 1889  T
Q  453 tcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1888 tcacctctctgcatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaa 1825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 7e-57; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 344 - 516
Target Start/End: Original strand, 22742707 - 22742878
Alignment:
Q  344 aatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt 443  Q
    ||||||||||| ||||||||||| |||||||||| ||| |||||||||| ||||||| | |||||| |||||||||||||||||||| || |||||||||    
T  22742707 aatagccagcc-taattttttagtgagagaaactatgtattctctctaagttttcttcctctttcattcatcgaggaggggtgattttaggtcaattttt 22742805  T
Q  444 gacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
     | |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22742806 aatctagaatcacccctctgcatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaa 22742878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 344 - 516
Target Start/End: Complemental strand, 24351166 - 24350994
Alignment:
Q  344 aatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt 443  Q
    |||||||  |||||||||||||| ||||||||||||||||||||| ||| ||||||| | || |||||||||||||||||||||||| || |||||||||    
T  24351166 aatagccgaccctaattttttagtgagagaaactctgtcttctctttaagttttcttcctctctcactcatcgaggaggggtgattttaggtcaattttt 24351067  T
Q  444 gacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||| ||| |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  24351066 gacctagaatcacccctgtgcatccttttttccctttctttcaatctaaataagtgattttcacatacatcaa 24350994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 372 - 516
Target Start/End: Original strand, 35132747 - 35132891
Alignment:
Q  372 gaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatctttt 471  Q
    ||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||| ||||||||    
T  35132747 gaaactctgtcttctctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacccctctacatctttt 35132846  T
Q  472 ttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||    
T  35132847 ttcccctttcttttaatctaaataagtgattttcacatacatcaa 35132891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 340 - 516
Target Start/End: Complemental strand, 1749466 - 1749294
Alignment:
Q  340 aaacaatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaat 439  Q
    ||||||||| ||||| ||||||||| | ||||||  ||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| || |||||    
T  1749466 aaacaatagtcagcc-taatttttt-gtgagagaccctctgtcttctctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaat 1749369  T
Q  440 ttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||||||| || || |||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  1749368 ttttgacctagaatcac-ccgcttcatctttttt-ccctttctttcaatctaaataagtgattttcacatacatcaa 1749294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 358 - 516
Target Start/End: Original strand, 28476005 - 28476161
Alignment:
Q  358 attttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcaca 457  Q
    ||||||||| |||||||||||| | |||||||||| ||||||| | |||||||  |||||||||||||||||| || ||||||||||||||||||||||     
T  28476005 attttttagtgagagaaactctttattctctctaagttttcttcctctttcacatatcgaggaggggtgattttaggtcaatttttgacctagaatcacc 28476104  T
Q  458 cctctgcat-cttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||   ||||  ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  28476105 cc---gcatatttttttctcctttctttcaatctaaataagtgattttcacatacatcaa 28476161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 382 - 509
Target Start/End: Complemental strand, 30757104 - 30756976
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccc-ttt 480  Q
    ||||||||||||||||||||| |||||  |||||||||||||||| ||| || | | |||||||||||||||||| ||||| |||||||||||||| |||    
T  30757104 cttctctctaaattttctttctctttcgttcatcgaggaggggtggttttaggtaattttttgacctagaatcacccctctacatcttttttcccctttt 30757005  T
Q  481 ctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||||| ||||||||||||||    
T  30757004 ctttcaatctaaataagtgattttcacat 30756976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 359 - 516
Target Start/End: Complemental strand, 19405062 - 19404905
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| |||||||||||   ||||||||||||| ||||||| | || | |||| ||| ||||||| ||| || ||| |||||||||||||||||| |    
T  19405062 ttttttagtgagagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggtggttttaggtcattttttgacctagaatcaccc 19404963  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||| |||||||||| || ||||||||||||||||| |||| |||||||||| |||||    
T  19404962 ctctacatctttttttccttttctttcaatctaaataagtggttttcacataaatcaa 19404905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 344 - 504
Target Start/End: Complemental strand, 8013788 - 8013627
Alignment:
Q  344 aatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt 443  Q
    ||||| |||||||| |||||||| ||||||||||    |||||||||||| ||||||||   ||   |||||||||||||||| ||| |||||| |||||    
T  8013788 aatagtcagccctagttttttagtgagagaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggtggttttagatcatttttt 8013689  T
Q  444 gacctagaatcacacctctgcatc-ttttttcccctttctttcaatctaaattagtgatttt 504  Q
    ||||||||||||| ||||| |||| ||||||||| ||||||||| ||||||| |||||||||    
T  8013688 gacctagaatcacccctctacatctttttttcccttttctttcagtctaaataagtgatttt 8013627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 352 - 509
Target Start/End: Complemental strand, 9450452 - 9450294
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    ||||||||||| ||| |||||||||||   ||||| | |||| |||||||| | |||  ||||||||||||| || ||| || ||| |||||||||||||    
T  9450452 gccctaattttctagtgagagaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggatggttttaggtcattttttgacctaga 9450353  T
Q  452 atcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    ||||| | ||| |||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  9450352 atcacccatctacatcttgtttccccttttctttcaatctaaataagtgattttcacat 9450294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 368 - 510
Target Start/End: Complemental strand, 37837757 - 37837615
Alignment:
Q  368 gagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatc 467  Q
    |||||||||||   |||||||||||| ||| |||| | |||  |||| ||||||||||| ||| || ||| |||||||||||||||||| ||||| ||||    
T  37837757 gagagaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatc 37837658  T
Q  468 ttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||||||| ||||||||||||||||| |||| ||| ||||||    
T  37837657 ttttttcccttttctttcaatctaaataagtggtttacacata 37837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 359 - 516
Target Start/End: Original strand, 47590097 - 47590252
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| |||||||| ||   ||||||||||||||||||||| | |||  |||| ||||||||||||||| || || |||||||| |||||||||| |    
T  47590097 ttttttagtgagagaaattccaacttctctctaaattttctttctcattcgttcatagaggaggggtgattttaggtc-atttttgaactagaatcaccc 47590195  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||| ||| |||||||||  |||||||||||||||| |||| |||||||||| |||||    
T  47590196 ctctacat-ttttttccctattctttcaatctaaataagtggttttcacatatatcaa 47590252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 359 - 510
Target Start/End: Original strand, 42978391 - 42978544
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||| ||| ||||||||||||  |||||||||||| |||||||| | |||  |||||||||||||||| ||| || ||| ||||||||||||||||||      
T  42978391 ttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacca 42978490  T
Q  459 ctctgcatcttttt-tcccc-tttctttcaatctaaattagtgattttcacata 510  Q
    |||| ||||||||| ||||| ||||  ||||||||||| |||| ||||||||||    
T  42978491 ctctacatctttttctccccttttcgatcaatctaaataagtggttttcacata 42978544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 360 - 509
Target Start/End: Complemental strand, 12141615 - 12141464
Alignment:
Q  360 tttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacc 459  Q
    ||||||| |||||||||||   |||||||||||| |||||||| | |||  ||||||| |||||||| ||| || ||| |||||||| ||||||||| ||    
T  12141615 tttttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaagaggggtggttttaggtcattttttgacatagaatcacccc 12141516  T
Q  460 tctgcatcttttttccc--ctttctttcaatctaaattagtgattttcacat 509  Q
    ||| |||||||||||||   ||| ||||||||||||| |||| |||||||||    
T  12141515 tctacatcttttttcccttttttatttcaatctaaataagtggttttcacat 12141464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 353 - 495
Target Start/End: Original strand, 19296655 - 19296798
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    ||||| |||||||| | |||||||||   |||| |||||| |||| |||  | |||  |||||||||||||||| ||| || ||| ||||||||||||||    
T  19296655 ccctagttttttagtgggagaaactccaacttccctctaatttttttttgtccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaa 19296754  T
Q  453 tcacacctctgcatcttttttcccc-tttctttcaatctaaatt 495  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||    
T  19296755 tcacccctctacatcttttttccccttttctttcaatctaaatt 19296798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 371 - 509
Target Start/End: Complemental strand, 48317108 - 48316969
Alignment:
Q  371 agaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttt 470  Q
    |||||||||  ||||||||||||||| ||||| | |||  ||||| |||||||||| ||| || ||| |||| ||||||||||||| ||||| |||||||    
T  48317108 agaaactctaacttctctctaaatttgctttctccttcgttcatcaaggaggggtggttttaggtcatttttggacctagaatcacccctctacatcttt 48317009  T
Q  471 tttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    || |||| ||||||||||| ||||| |||| |||||||||    
T  48317008 ttcccccttttctttcaatttaaataagtggttttcacat 48316969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 358 - 516
Target Start/End: Complemental strand, 5078702 - 5078545
Alignment:
Q  358 attttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcaca 457  Q
    ||||||||| ||||||||||    ||||||||||| || |||||  |||||||||||  |||| ||||||||| || ||| ||||||||||||||||||     
T  5078702 attttttagtgagagaaacttcaacttctctctaagttctctttatctttcactcattaaggaagggtgattttaggtcattttttgacctagaatcacc 5078603  T
Q  458 cctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||| ||| || || || |||| |||||||| ||||||||| ||||| |||||    
T  5078602 cctctgcatc-tttctctccattatttcgatctaaataagtgatttttacatatatcaa 5078545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 345 - 509
Target Start/End: Complemental strand, 13797253 - 13797089
Alignment:
Q  345 atagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttg 444  Q
    |||||| | |||| |||| ||| ||||||||||    ||||||| ||||||||||||| | |||  |||||||||| || || ||| || ||| |||||     
T  13797253 atagccggtcctagttttctagtgagagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggatggttttaggtcatttttta 13797154  T
Q  445 acctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||| ||||| ||||||||| ||| ||||||||||| ||||| ||||||||| ||||    
T  13797153 acctagaatcacccctctacatctttttccccttttctttcaatttaaataagtgattttaacat 13797089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 360 - 509
Target Start/End: Original strand, 48061206 - 48061357
Alignment:
Q  360 tttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacc 459  Q
    ||||||| |||||||||||   |||||||||||| |||||||  | |||  ||||||||||| |||| ||| || ||| |||||||| ||||||||| ||    
T  48061206 tttttagagagagaaactccaacttctctctaaactttctttatccttcgttcatcgaggagaggtggttttaggtcattttttgacttagaatcacccc 48061305  T
Q  460 tctgcatcttttttcccc--tttctttcaatctaaattagtgattttcacat 509  Q
     || ||| ||||||||||  ||||||||||||||||| |||| |||||||||    
T  48061306 actacatattttttcccctttttctttcaatctaaataagtggttttcacat 48061357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 453 - 516
Target Start/End: Original strand, 48930657 - 48930720
Alignment:
Q  453 tcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48930657 tcacccctctacatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaa 48930720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 394 - 504
Target Start/End: Original strand, 11343618 - 11343726
Alignment:
Q  394 ttttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaa 493  Q
    ||||||||| ||||| ||||||||| ||||||||||| || | | |||||||||||||||||| ||| ||||| |||||| || ||||||||||||||||    
T  11343618 ttttctttctctttcgctcatcgagaaggggtgattttagtttattttttgacctagaatcacccct-tgcat-tttttttccatttctttcaatctaaa 11343715  T
Q  494 ttagtgatttt 504  Q
    | |||||||||    
T  11343716 taagtgatttt 11343726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 382 - 516
Target Start/End: Original strand, 24770061 - 24770195
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttc 481  Q
    |||||||||||| |||||||| | |||  ||||||||  |||||||||| || ||| ||| |||| ||||||||  | ||| ||||||||||  | ||||    
T  24770061 cttctctctaaactttctttctcattcgttcatcgagacggggtgattttaggtcattttatgacttagaatcatccatctacatcttttttttcttttc 24770160  T
Q  482 tttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||| |||| |||||||||| |||||    
T  24770161 tttcaatctaaataagtggttttcacatatatcaa 24770195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 359 - 509
Target Start/End: Complemental strand, 34899912 - 34899764
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| | |||||||||   |||||||||||| |||||||| | |||  ||| ||| ||| |||   || || ||| |||||||||||||||||| |    
T  34899912 ttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcaccgatgagtggt---tttaggtcattttttgacctagaatcaccc 34899816  T
Q  459 ctctgcatcttttttccccttt-ctttcaatctaaattagtgattttcacat 509  Q
    |||| |||||||||| |||||| |||||||||||||| |||| |||||||||    
T  34899815 ctctacatctttttttcccttttctttcaatctaaataagtggttttcacat 34899764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 352 - 516
Target Start/End: Original strand, 4529855 - 4530020
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||| ||| ||||||||||    ||||||||||| | ||||||| | |||| ||||| | ||| |||||||| || ||| |||||||| ||||    
T  4529855 gccctagttttctagtgagagaaacttcaccttctctctaagtcttctttctccttcattcatcaaagagaggtgattttaggtcattttttgacataga 4529954  T
Q  452 atcacacctctgcatcttttttccc-ctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    | ||  || || ||||||||||||| |||||||||||||||| | |||  |||||||||| |||||    
T  4529955 accatcccgctacatcttttttccctctttctttcaatctaagtaagtatttttcacatatatcaa 4530020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 506
Target Start/End: Complemental strand, 39171873 - 39171751
Alignment:
Q  386 tctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatc--ttttttcccctttctt 483  Q
    |||||||| ||||||||   |||  |||||||||||||||| ||  || ||| |||||||||||||||||| ||||| ||||  ||||||||  ||||||    
T  39171873 tctctaaactttctttcttcttcgttcatcgaggaggggtggttgtaggtcattttttgacctagaatcacccctctacatcttttttttcctttttctt 39171774  T
Q  484 tcaatctaaattagtgattttca 506  Q
    || |||||||| |||| ||||||    
T  39171773 tcgatctaaataagtggttttca 39171751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 508
Target Start/End: Complemental strand, 39329114 - 39328951
Alignment:
Q  346 tagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttg- 444  Q
    ||||| ||||||||||| ||| |||||||||||   ||| | |||||| |||||||| | ||   |||||||||||| |||  || || ||  |||||      
T  39329114 tagccggccctaattttctagtgagagaaactcaaacttttttctaaactttctttctcctttgttcatcgaggaggagtgggtttaggtcttttttttt 39329015  T
Q  445 acctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||||||||| || | ||||||||||||||||| ||||||||||| ||||| |||| ||||||||    
T  39329014 acctagaattacccatctgcatcttttttcccttttctttcaatttaaataagtggttttcaca 39328951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 438 - 516
Target Start/End: Original strand, 27996951 - 27997029
Alignment:
Q  438 atttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||||||||||   ||| ||||||||||  ||||||||||||||||||| |  |||||||||||| |||||    
T  27996951 atttttgacctagaatcacttatctacatcttttttttcctttctttcaatctaaataatagattttcacatatatcaa 27997029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 438 - 503
Target Start/End: Complemental strand, 35665361 - 35665295
Alignment:
Q  438 atttttgacctagaatcacacctctgcatcttt-tttcccctttctttcaatctaaattagtgattt 503  Q
    ||||||||||||||||||| ||||||||||||| ||| | ||||||||| |||||||| ||||||||    
T  35665361 atttttgacctagaatcacccctctgcatctttattttctctttctttcgatctaaataagtgattt 35665295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 508
Target Start/End: Complemental strand, 5348896 - 5348747
Alignment:
Q  354 cctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaat 453  Q
    |||| |||||||| || |||||||   |||||| | ||| ||||||||| | || | ||||||||||| |||| |||| | | | |||||||||||||||    
T  5348896 cctagttttttagtgaaagaaacttcatcttctttttaagttttctttctcctttattcatcgaggagaggtgttttagg-taagtttttgacctagaat 5348798  T
Q  454 cacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||| ||||   |||||||||||  ||||||||||| ||||| |||||||||||||    
T  5348797 cacccctc---atcttttttcct-tttctttcaatttaaataagtgattttcaca 5348747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 510
Target Start/End: Original strand, 25067862 - 25068019
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||||||| |||||||||||   |||||| |||| ||||||||  |||||| | |||||| | | ||| ||| |  |||  ||||||||| ||    
T  25067862 gccctagttttttagtgagagaaactccaccttctcactaagttttctttttctttcatttatcgagaatgagtggttttatgtcatcttttgaccttga 25067961  T
Q  452 atcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||| | | |||||| ||||||   ||||||||||||||||| |||||||| ||||||    
T  25067962 atcacccatttgcatcctttttcta-tttctttcaatctaaataagtgatttccacata 25068019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 508
Target Start/End: Original strand, 25255084 - 25255169
Alignment:
Q  422 gggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||||| ||| || ||| ||||||||||| |||||| ||| |||||||||| |||||||||||||||| ||||| |||  ||||||||    
T  25255084 gggtggttttaggtcattttttgacctataatcacccctttgcatctttt-tcccctttctttcaatttaaataagttgttttcaca 25255169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 439 - 509
Target Start/End: Original strand, 40993044 - 40993116
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccc--tttctttcaatctaaattagtgattttcacat 509  Q
    ||||||||||| |||||| ||||| |||||||||| ||   ||||||||||||||||| |||| |||||||||    
T  40993044 tttttgacctaaaatcactcctctacatctttttttccacttttctttcaatctaaataagtggttttcacat 40993116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 418 - 507
Target Start/End: Complemental strand, 45350051 - 45349962
Alignment:
Q  418 ggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcac 507  Q
    |||||| || ||| || ||| |||||||||||||||||| | ||| | ||||||||||  ||||||||||| ||||| |||| |||||||    
T  45350051 ggagggttggttttaggtcattttttgacctagaatcacccatctacttcttttttcctttttctttcaatttaaataagtggttttcac 45349962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 46821899 - 46821972
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||  |||||| ||||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  46821899 tcaattcttgacctgaaatcacccctcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 46821972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 469 - 507
Target Start/End: Original strand, 3394365 - 3394403
Alignment:
Q  469 tttttcccctttctttcaatctaaattagtgattttcac 507  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  3394365 tttttcccctttctttcgatctaaataagtgattttcac 3394403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 439 - 501
Target Start/End: Complemental strand, 24069669 - 24069607
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgat 501  Q
    ||||||| |||||| ||| | |||| |||||||| ||||||| ||||||||||||| ||||||    
T  24069669 tttttgatctagaaccacccttctgtatctttttccccctttatttcaatctaaataagtgat 24069607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 438 - 516
Target Start/End: Complemental strand, 26610972 - 26610895
Alignment:
Q  438 atttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||| |||||| | | ||||||||||| ||||||||||| ||| ||||| |||| ||| |||||| |||||    
T  26610972 atttttgacctaaaatcacccttatgcatcttttt-cccctttctttgaatttaaataagtggtttccacatatatcaa 26610895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 484
Target Start/End: Complemental strand, 3224725 - 3224601
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| |||||||| ||   ||| | ||||||||||||||| ||||||||| |||| || ||||| ||| || || ||||||  | ||||||||| |    
T  3224725 ttttttagtgagagaaattccaacttttttctaaattttctttctctttcactcttcgaagatgggtggttttaggtc-atttttatcatagaatcactc 3224627  T
Q  459 ctctgcatcttttttcccctttcttt 484  Q
    |||  ||||||||||| | |||||||    
T  3224626 ctcaacatcttttttctcttttcttt 3224601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 510
Target Start/End: Complemental strand, 49148289 - 49148248
Alignment:
Q  469 tttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||||||||||||||||| |||||| |||| ||||||||||    
T  49148289 tttttcccctttctttcaaactaaataagtggttttcacata 49148248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Complemental strand, 2843419 - 2843346
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||  || ||| ||||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  2843419 tcaattcttgacctgaaaacacccctcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 2843346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 516
Target Start/End: Original strand, 5775075 - 5775154
Alignment:
Q  439 tttttgacctagaatcacacctctgcatctttttt--cccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| |||||||||||| ||||| ||||| ||||  |||||||||||  || ||||| |||||||| |||||| |||||    
T  5775075 ttttttacctagaatcacccctctccatctattttcccccctttcttttgatataaataagtgatttccacatatatcaa 5775154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 354 - 402
Target Start/End: Complemental strand, 25287494 - 25287446
Alignment:
Q  354 cctaattttttagggagagaaactctgtcttctctctaaattttctttc 402  Q
    ||||||||||||| |||||||||| |  ||||||| |||||||||||||    
T  25287494 cctaattttttagtgagagaaactataacttctctataaattttctttc 25287446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 406 - 494
Target Start/End: Complemental strand, 38051327 - 38051240
Alignment:
Q  406 ttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaat 494  Q
    |||||||||  |||||||||| ||| || |||  |||| |||||||||||| | ||| |||| |||| ||||||||||| |||||||||    
T  38051327 ttcactcattaaggaggggtggttttaggtcatattttaacctagaatcacccatctacatcatttt-cccctttcttttaatctaaat 38051240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 4e-55; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 347 - 516
Target Start/End: Complemental strand, 21290139 - 21289971
Alignment:
Q  347 agccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgac 446  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||| |||||| |||||||| || ||||||||||||    
T  21290139 agcctgccctaattttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatggaggagaggtgattttaggtcaatttttgac 21290040  T
Q  447 ctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||| |||||||||||||||||||| ||||||||||| |||| ||||||||| |||||||||||    
T  21290039 ctagaatcacccctctgcatcttttttcccc-ttctttcaatccaaataagtgattttaacatacatcaa 21289971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 340 - 516
Target Start/End: Complemental strand, 51303965 - 51303790
Alignment:
Q  340 aaacaatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaat 439  Q
    ||||||||| | ||||||||||||||  ||||||||||||||||||||||||| ||||||| | |||| ||||||||||||||| |||||| |  |||||    
T  51303965 aaacaatagtcggccctaattttttaatgagagaaactctgtcttctctctaagttttcttcctcttttactcatcgaggagggatgattttatgtcaat 51303866  T
Q  440 ttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  51303865 ttttgacctagaatcac-cctctgcatcttttttcccctttttttcaatccaaataagtgattttcacatacatcaa 51303790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 368 - 516
Target Start/End: Original strand, 7546400 - 7546550
Alignment:
Q  368 gagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatc 467  Q
    |||||||| ||  |||||||||||| ||||||||| || |||||||||||||||||||||||| || ||||||||||| |||||||||| ||||||||||    
T  7546400 gagagaaattcaatcttctctctaagttttctttctctctcactcatcgaggaggggtgattttaggtcaatttttgatctagaatcacccctctgcatc 7546499  T
Q  468 --ttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
      |||||||||| |||||||||||||||| |||||||||||||||||||||    
T  7546500 ttttttttcccccttctttcaatctaaataagtgattttcacatacatcaa 7546550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 340 - 516
Target Start/End: Original strand, 8914466 - 8914643
Alignment:
Q  340 aaacaatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaat 439  Q
    ||||||||||| ||||||||||||||| |||||||| | |||||||||||||| ||||||| | ||||||||||||||| ||||||||||| || |||||    
T  8914466 aaacaatagcctgccctaattttttagtgagagaaattatgtcttctctctaagttttcttcctctttcactcatcgagaaggggtgattttaggtcaat 8914565  T
Q  440 ttttgacctagaatcacacctctgcatc--ttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||||| || ||||||||||  ||||||||||||| ||| |||  |||| || ||||||||||||||||||    
T  8914566 ttttgacctagaataacccctctgcatcttttttttccccttt-ttttaattaaaataagggattttcacatacatcaa 8914643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 352 - 507
Target Start/End: Original strand, 40487099 - 40487254
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    ||||||||||| ||| |||||||||||   |||||||||||| |||||||| | |||  |||||||||||||||||||| || ||| |||||||||||||    
T  40487099 gccctaattttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctaga 40487198  T
Q  452 atcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcac 507  Q
    ||||| | ||| ||||||||| ||| ||||||||||||||||| |||| |||||||    
T  40487199 atcactcttctacatctttttccccttttctttcaatctaaataagtggttttcac 40487254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 354 - 516
Target Start/End: Original strand, 42460519 - 42460685
Alignment:
Q  354 cctaattttttagggagagaaactctgtcttctctctaaatt---ttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctag 450  Q
    ||||||||||||| |||||||| | |||||||||| ||||||   || |||| |||||||| ||||||||||| |||||| || ||| |||||||||||     
T  42460519 cctaattttttagtgagagaaattatgtcttctctttaaattaatttttttctctttcacttatcgaggagggatgattttaggtcagtttttgacctaa 42460618  T
Q  451 aatcacacctctgcatcttttttccccttt-ctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||    ||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  42460619 aatcatcaatctgcatcttttttccccttttctttcaatctaaataagtgatttccacatacatcaa 42460685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 354 - 516
Target Start/End: Original strand, 16235196 - 16235357
Alignment:
Q  354 cctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaat 453  Q
    ||||||||||||| |||||| ||| |||||||| | ||| ||||||| | ||||||||||| ||||| | ||||||| || |||||||||||||||||||    
T  16235196 cctaattttttagtgagagatactatgtcttcttt-taagttttcttcctctttcactcattgaggatgagtgattttaggtcaatttttgacctagaat 16235294  T
Q  454 cacacctctgcatcttttttcccctttctttcaatctaaattagtga-ttttcacatacatcaa 516  Q
    ||| | |||||||||||||| || ||| ||||||||||||| ||||| ||||||||||||||||    
T  16235295 cactcatctgcatctttttt-ccttttttttcaatctaaataagtgatttttcacatacatcaa 16235357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 353 - 516
Target Start/End: Complemental strand, 50194597 - 50194434
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    ||||| |||||||| |||||||||||   ||||||||||| ||||| ||| ||||||||| ||||| ||| ||| ||| |||||| ||||||||||| ||    
T  50194597 ccctagttttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtcgagaaggagtggttttagatcattttttgacctaaaa 50194498  T
Q  453 tcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||  ||||||||| |||||||| | ||||||||||||||| |||||||| |||||| |||||    
T  50194497 tcacctctctgcatcctttttcccttctctttcaatctaaataagtgatttccacatatatcaa 50194434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 359 - 508
Target Start/End: Complemental strand, 629214 - 629064
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| ||||||||||||  ||||||||||| ||||| ||||||||||||||||||||||||||| ||| || ||| | ||||||||| |||||  |    
T  629214 ttttttagtgagagaaactctaacttctctctaagttttccttccctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcatcc 629115  T
Q  459 ctctgcatctt-ttttcccctttctttcaatctaaattagtgattttcaca 508  Q
     |||||||||| |||| ||| ||||||| |||||||| |||||||||||||    
T  629114 ttctgcatcttttttttccccttctttcgatctaaataagtgattttcaca 629064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 352 - 516
Target Start/End: Original strand, 47895925 - 47896090
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||| ||| |||||||||||   |||||||||||| |||||||| | |||  |||||||||||||||| ||  |||||| |||||||||||||    
T  47895925 gccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttatagatcattttttgacctaga 47896024  T
Q  452 atcacacctctgcatcttttttc-ccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| ||||| ||||||||||| |  ||||||||||||||||| |||| |||||||||| |||||    
T  47896025 atcacccctctacatcttttttctctttttctttcaatctaaataagtggttttcacatatatcaa 47896090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 359 - 516
Target Start/End: Original strand, 29921833 - 29921991
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgattta-agatcaatttttgacctagaatcaca 457  Q
    ||||||||  ||||| |||||  ||||||||||| ||||||||| |||||| || ||||||||||||| |||  || ||| ||||||| ||| ||||||     
T  29921833 ttttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcact 29921932  T
Q  458 cctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
     |||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  29921933 tctctccatcttttttcccctttctttcaatctaaataagtgatttccacatatatcaa 29921991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 359 - 516
Target Start/End: Original strand, 29970986 - 29971144
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgattta-agatcaatttttgacctagaatcaca 457  Q
    ||||||||  ||||| |||||  ||||||||||| ||||||||| |||||| || ||||||||||||| |||  || ||| ||||||| ||| ||||||     
T  29970986 ttttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcact 29971085  T
Q  458 cctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
     |||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  29971086 tctctccatcttttttcccctttctttcaatctaaataagtgatttccacatatatcaa 29971144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 353 - 507
Target Start/End: Original strand, 10232845 - 10233000
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    ||||| |||| ||| | |||||||||   |||||||||||| |||||||| | |||  ||||| |||||||||| ||| || ||| ||||||||||||||    
T  10232845 ccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggtggttttaggtcattttttgacctagaa 10232944  T
Q  453 tcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcac 507  Q
    |||| ||||| |||||||||||||| ||||||||||||||||| |||| |||||||    
T  10232945 tcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcac 10233000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 359 - 508
Target Start/End: Complemental strand, 53808170 - 53808024
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| |||||||||||   ||||||||||| ||||| ||| ||||| ||||||||||||||||||||| |||||||   |||||||| |||| | |    
T  53808170 ttttttagtgagagaaactccaacttctctctaagttttccttctctttcgctcatcgaggaggggtgattttagatcaa--attgacctaaaatctc-c 53808074  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
     |||||||||||||| ||||||| ||| |||||||| |||||||||||||    
T  53808073 ttctgcatctttttttccctttcgttcgatctaaataagtgattttcaca 53808024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 353 - 503
Target Start/End: Original strand, 43016630 - 43016782
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaat--ttttgacctag 450  Q
    ||||| |||| ||| ||||||||||||  ||||||||||||||||||||| |||||  |||||||||| ||||| ||| || ||| |  |||||||||||    
T  43016630 ccctagttttctagtgagagaaactctaacttctctctaaattttctttctctttcgttcatcgaggaagggtggttttaggtcagttcttttgacctag 43016729  T
Q  451 aatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattt 503  Q
    |||||| ||||  | ||||||||||||||||||||||| || || ||||||||    
T  43016730 aatcacccctccacgtcttttttcccctttctttcaatttatataagtgattt 43016782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 382 - 509
Target Start/End: Complemental strand, 6954981 - 6954853
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccc-ttt 480  Q
    |||||||||||| |||||||| | |||  |||  ||||||||||||||| || ||| |||||||||||||||||| ||||| |||||||||||||| |||    
T  6954981 cttctctctaaactttctttctccttcgttcactgaggaggggtgattttaggtcattttttgacctagaatcacccctctacatcttttttcccctttt 6954882  T
Q  481 ctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||||| ||||  ||||||||    
T  6954881 ctttcaatctaaataagtgggtttcacat 6954853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 353 - 507
Target Start/End: Original strand, 9998241 - 9998397
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttt-tgacctaga 451  Q
    ||||| |||| ||| | |||||||||   |||||||||||| |||||||| | |||  |||||||||||||||| ||| || ||| |||| |||||||||    
T  9998241 ccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgacctaga 9998340  T
Q  452 atcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcac 507  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||| |||| |||||||    
T  9998341 atcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcac 9998397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 359 - 516
Target Start/End: Original strand, 29249024 - 29249181
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgattt-aagatcaatttttgacctagaatcaca 457  Q
    |||||||| ||||||||||||  ||||||| ||| ||||||||| | ||||||||||||| || | |||||| ||| ||| ||||||||||||||||||     
T  29249024 ttttttagtgagagaaactctaacttctctttaatttttctttctccttcactcatcgagaagtgatgatttgaaggtcactttttgacctagaatcact 29249123  T
Q  458 cctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
     |||| |||| ||||||| ||||| ||| |||||||| |||| |||||||||| |||||    
T  29249124 tctcttcatc-tttttcctctttcgttcgatctaaataagtgtttttcacatatatcaa 29249181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 353 - 509
Target Start/End: Original strand, 21431400 - 21431556
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    ||||| |||| ||| | |||||||||   |||||||||||| |||||||| | |||  |||||||||||||||| ||| || ||| ||||||||||| ||    
T  21431400 ccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca-tttttgacctaaaa 21431498  T
Q  453 tcacacctctgcatcttttttccc-ctttctttcaatctaaattagtgattttcacat 509  Q
    |||| ||||| |||||||||||||  ||||||||||||||||| |||| |||||||||    
T  21431499 tcacccctctacatcttttttcccattttctttcaatctaaataagtggttttcacat 21431556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 343 - 515
Target Start/End: Complemental strand, 47042375 - 47042203
Alignment:
Q  343 caatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttt 442  Q
    |||||||| ||||||||||| ||| || ||||||||   |||||||||||| ||| |||  | |||  |||||||||||||||| ||| || ||| ||||    
T  47042375 caatagcc-gccctaattttctagtgaaagaaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggtggttttaggtcattttt 47042277  T
Q  443 tgacctagaatcacacctctgcatc-ttttttcccctttctttcaatctaaattagtgattttcacatacatca 515  Q
    | ||||| |||||| ||||| |||| ||||||||| ||||||||||| ||||| ||||||||||||||| ||||    
T  47042276 taacctataatcacccctctacatctttttttcccttttctttcaatttaaataagtgattttcacatatatca 47042203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 353 - 507
Target Start/End: Original strand, 10108013 - 10108166
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    ||||| |||| ||| | |||||||||   |||||||||||| |||||||| | ||   |||||||||||||||| ||| || |||  |||||||||||||    
T  10108013 ccctagttttctagtgggagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtggttttaggtca--ttttgacctagaa 10108110  T
Q  453 tcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcac 507  Q
    |||| ||||| |||||||||||||| ||||||||||||||||| |||| |||||||    
T  10108111 tcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcac 10108166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 382 - 510
Target Start/End: Original strand, 33579672 - 33579800
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttc 481  Q
    |||||||||||| |||||||  | |||  ||||||| || ||||| ||| |  ||| |||||||||||||||||| ||||| ||||||||||||  ||||    
T  33579672 cttctctctaaactttctttatccttcgttcatcgaagaagggtggttttaagtcattttttgacctagaatcacccctctacatcttttttccattttc 33579771  T
Q  482 tttcaatctaaattagtgattttcacata 510  Q
    ||||||||||||| |||||||||||||||    
T  33579772 tttcaatctaaataagtgattttcacata 33579800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 346 - 509
Target Start/End: Complemental strand, 36461752 - 36461588
Alignment:
Q  346 tagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttga 445  Q
    ||||| |||||| |||| ||| | ||||||||   | ||||||||||| |||||||| | |||  |||||||||| | ||| ||| || ||| |||||||    
T  36461752 tagccggccctagttttctagtgtgagaaacttcatattctctctaaactttctttctccttcgttcatcgaggatgagtggttttaggtcattttttga 36461653  T
Q  446 cctagaatcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    |||| | |||| ||||| |||||||||||||| ||||||||||||||||| ||||||||||||||    
T  36461652 cctatattcacccctctacatcttttttccccttttctttcaatctaaataagtgattttcacat 36461588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 352 - 509
Target Start/End: Complemental strand, 45568759 - 45568601
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||| ||| |||||||||||   |||||||||||| |||||||| | |||  |||||||||||||||| ||| || ||| ||||||| |||||    
T  45568759 gccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgatctaga 45568660  T
Q  452 atcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    || |  | ||| |||||||||||||| ||||||||||||||||| |||  |||||||||    
T  45568659 ataatccatctacatcttttttccccttttctttcaatctaaataagttgttttcacat 45568601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 353 - 509
Target Start/End: Complemental strand, 52923429 - 52923274
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggt-gatttaagatcaatttttgacctaga 451  Q
    ||||| |||||||| |  ||||||||   |||||||||||| |||||||| | |||  |||| |||||| ||| | |||||| || ||||||||||||||    
T  52923429 ccctatttttttagtggaagaaactccaacttctctctaaactttctttctccttcgttcattgaggagaggtagttttaag-tc-atttttgacctaga 52923332  T
Q  452 atcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||| |||| |||||||||    
T  52923331 atcacccctctacatcttttttcccttttctttcaatctaaataagtggttttcacat 52923274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 350 - 509
Target Start/End: Complemental strand, 31272124 - 31271964
Alignment:
Q  350 cagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggg-gtgatttaagatcaatttttgacct 448  Q
    ||||||||||||| ||| |||||||||||   ||||||||||| ||||||||  | |||  ||||||||||||| ||||||| || | | ||||| ||||    
T  31272124 cagccctaattttctagtgagagaaactccaacttctctctaagttttctttttccttcgttcatcgaggagggtgtgattttaggttattttttaacct 31272025  T
Q  449 agaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    |||||||  ||| | |||||||| |||||||||| ||||||||||| | || |||||||||    
T  31272024 agaatcatccctttacatcttttgtcccctttctatcaatctaaataaatggttttcacat 31271964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 383 - 509
Target Start/End: Original strand, 54148793 - 54148920
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcc-cctttc 481  Q
    ||||||||||| |||||||| | |||    |||||||||||||| ||| || ||| ||||||||||| |||||| ||||| |||||||||||| | ||||    
T  54148793 ttctctctaaactttctttctccttcgtcaatcgaggaggggtggttttaggtcattttttgacctacaatcacccctctacatcttttttcctcttttc 54148892  T
Q  482 tttcaatctaaattagtgattttcacat 509  Q
    ||||||||||||| |||| |||||||||    
T  54148893 tttcaatctaaataagtggttttcacat 54148920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 459 - 516
Target Start/End: Original strand, 51923611 - 51923668
Alignment:
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  51923611 ctctgcatcttttttcccctttctttcaatctaaataagtgattttcacatgcatcaa 51923668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 507
Target Start/End: Original strand, 10229279 - 10229406
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt--gacctagaatcacacctctgcatcttttttcccc-tt 479  Q
    ||||||||||| |||||||| | |||  |||||||||||||||| ||| || ||  |||||  |||||||||||||  |||| |||||||||||||| ||    
T  10229279 ttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttggacctagaatcaccactctacatcttttttccccttt 10229378  T
Q  480 tctttcaatctaaattagtgattttcac 507  Q
    ||||||||||||||| |||| |||||||    
T  10229379 tctttcaatctaaataagtggttttcac 10229406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 345 - 509
Target Start/End: Complemental strand, 48651057 - 48650891
Alignment:
Q  345 atagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttg 444  Q
    |||||| |||||| |||| ||| || ||||||||   |||||||||||| |||||||| |  ||  |||||||||||||||| ||| || ||| ||||||    
T  48651057 atagcccgccctagttttctagtgaaagaaactccaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttg 48650958  T
Q  445 acctagaatcacacctctgcatctttttt--cccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||| |||||| ||||  ||||||||||  ||| |||||||||||||  || |||| |||||||||    
T  48650957 acctaaaatcacccctcgacatctttttttccccttttctttcaatctgtataagtggttttcacat 48650891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 509
Target Start/End: Complemental strand, 21534116 - 21533966
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| ||||||||||||   ||||||||||| |||||||| | |||  | |||||||| ||||| ||| || ||  |||||||||||||||||| |    
T  21534116 ttttttagtgagagaaactctaatttctctctaaactttctttctccttcgttaatcgaggatgggtggttttaggtc--tttttgacctagaatcaccc 21534019  T
Q  459 ctctgcatctttttt--cccctttctttcaatctaaattagtgattttcacat 509  Q
    |||| ||||||||||  | | |||||| |||||||||| |||| |||||||||    
T  21534018 ctctacatctttttttcctcttttcttccaatctaaataagtggttttcacat 21533966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 439 - 512
Target Start/End: Original strand, 37040632 - 37040706
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttccc-ctttctttcaatctaaattagtgattttcacataca 512  Q
    |||||||||||||||||| ||||| |||||||||||||  ||||||||||||||||| |||| ||||||||||||    
T  37040632 tttttgacctagaatcacccctctacatcttttttcccattttctttcaatctaaataagtggttttcacataca 37040706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 359 - 500
Target Start/End: Original strand, 38142352 - 38142493
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| |||||||||||    |||| | ||| ||||||||| |||||| ||||| || | | ||||||| || ||| ||||||||||| |||||| |    
T  38142352 ttttttagtgagagaaactccacattctttttaagttttctttctctttcattcatcaagaatgagtgattttagttcattttttgacctaaaatcactc 38142451  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtga 500  Q
     |||||||||||||| | ||||||||||||| |||| |||||    
T  38142452 atctgcatctttttttcactttctttcaatcaaaataagtga 38142493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 347 - 480
Target Start/End: Original strand, 40556480 - 40556613
Alignment:
Q  347 agccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgac 446  Q
    |||| |||||| |||| ||| | |||||||||   ||||| |||||| |||||||| | |||  |||||||||||||||| ||| || ||| ||||||||    
T  40556480 agccggccctagttttctagtgggagaaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggtggttttaggtcattttttgac 40556579  T
Q  447 ctagaatcacacctctgcatcttttttccccttt 480  Q
    |||||||||| ||||  |||||||||| ||||||    
T  40556580 ctagaatcacccctccacatctttttttcccttt 40556613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 516
Target Start/End: Original strand, 35175205 - 35175337
Alignment:
Q  386 tctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt-gacctagaatcacacc-tctgcatcttttttcccctttctt 483  Q
    ||||||| ||||||||| ||||||||| || | |||||||| ||| || ||| ||||| ||||||||||||| || |||| || ||||||| |||||| |    
T  35175205 tctctaagttttctttctctttcactcgtctaagaggggtgcttttaggtcatttttttgacctagaatcaccccctctgaatattttttctcctttcat 35175304  T
Q  484 tcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||  |||||||| |||||| |||||    
T  35175305 tcaatctaaacaagtgatttccacatatatcaa 35175337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 356 - 510
Target Start/End: Original strand, 22290716 - 22290870
Alignment:
Q  356 taattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatca 455  Q
    ||||||||||| ||||||||||     |||| | ||| ||||||||| ||||||||||| | |||||  |||||| |  ||| ||||||| |||||||||    
T  22290716 taattttttagtgagagaaacttcaatttctttttaagttttctttctctttcactcatagtggaggtatgattttaattca-tttttgatctagaatca 22290814  T
Q  456 cacctctgcatcttttttccc-ctttctttcaatctaaattagtgattttcacata 510  Q
       || ||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  22290815 tctctttgcatcttttttccctctttcttttaatctaaataagtgattttcacata 22290870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 439 - 509
Target Start/End: Complemental strand, 36910869 - 36910798
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    ||||| |||||||||||| ||||| |||||||||||||| ||||||||||||||||| |||| |||||||||    
T  36910869 ttttttacctagaatcactcctctacatcttttttccccttttctttcaatctaaataagtggttttcacat 36910798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 439 - 509
Target Start/End: Complemental strand, 43488818 - 43488747
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttccc-ctttctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||||||||| ||||| |||||||||||||  ||||||||||||||||| |||| |||||||||    
T  43488818 tttttgacctagaatcacccctctacatcttttttccctttttctttcaatctaaataagtggttttcacat 43488747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 499
Target Start/End: Original strand, 32701302 - 32701420
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttc-cccttt 480  Q
    ||||||| |||| |||||||| | |||  ||||||||| |||||| ||| || ||| |||||||||||||||||  ||||| ||||||| ||| || |||    
T  32701302 cttctctttaaactttctttctccttcgttcatcgaggtggggtggttttaggtcattttttgacctagaatcatccctctacatctttcttctcctttt 32701401  T
Q  481 ctttcaatctaaattagtg 499  Q
    |||||||||||||| ||||    
T  32701402 ctttcaatctaaataagtg 32701420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 438 - 516
Target Start/End: Original strand, 53508081 - 53508159
Alignment:
Q  438 atttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||| |||||| | ||||| ||||||||||  ||||||||||| ||||| ||||||||||||||| |||||    
T  53508081 atttttgacctaaaatcacccatctgcgtcttttttcctttttctttcaatataaataagtgattttcacatatatcaa 53508159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 51923542 - 51923599
Alignment:
Q  372 gaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatt 429  Q
    ||||||||||||||||||||| ||||||| | |||||||||||| |||||||||||||    
T  51923542 gaaactctgtcttctctctaagttttcttcctctttcactcatcaaggaggggtgatt 51923599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 346 - 509
Target Start/End: Original strand, 9319831 - 9319988
Alignment:
Q  346 tagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttga 445  Q
    ||||| |||||| |||||||| | ||||||||||  |||||||||||||||||     | |||  |||||||||||| ||| ||| |||| | |||||||    
T  9319831 tagccggccctagttttttagtgggagaaactctaacttctctctaaattttc-----ccttcgttcatcgaggaggagtggttttagatta-tttttga 9319924  T
Q  446 cctagaatcacacctctgcatctttt-ttcccctttctttcaatctaaattagtgattttcacat 509  Q
    | || |||||| ||||| |||||||| ||||||||| |||||||| |||| |||| |||||||||    
T  9319925 catataatcac-cctctacatctttttttcccctttttttcaatcaaaataagtggttttcacat 9319988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 353 - 516
Target Start/End: Complemental strand, 35865247 - 35865084
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    ||||| |||| ||| ||||||||||    |||||||||||| |||||||| | |||  || ||||||||||||| ||| || ||| ||||||| ||| ||    
T  35865247 ccctagttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggtggttttaggtca-tttttgatctaaaa 35865149  T
Q  453 tcacacctctgcatcttttttccccttt-ctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||  | ||| |||||||||||| |||| |||||||||||||| |||  |||||||||| |||||    
T  35865148 tcatccttctacatcttttttcctcttttctttcaatctaaataagtagttttcacatatatcaa 35865084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 382 - 510
Target Start/End: Complemental strand, 4396611 - 4396488
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttc 481  Q
    ||||||| ||| ||||||||| ||||| ||| |||||||| |||  |||| | |   |||||||||||||||||| |||  ||||||||||||||| |||    
T  4396611 cttctctttaagttttctttctctttcgctcgtcgaggagtggt--tttaggttatttttttgacctagaatcacccct--gcatcttttttcccc-ttc 4396517  T
Q  482 tttcaatctaaattagtgattttcacata 510  Q
    ||||||| ||||| |||||||| ||||||    
T  4396516 tttcaatttaaataagtgatttccacata 4396488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 439 - 509
Target Start/End: Complemental strand, 9797758 - 9797686
Alignment:
Q  439 tttttgacctagaatcacacctctgcatc--ttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||||||||| ||||| ||||  ||||||| | ||||||||||||||||| |||| |||||||||    
T  9797758 tttttgacctagaatcacccctctacatcttttttttctcttttctttcaatctaaataagtggttttcacat 9797686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 516
Target Start/End: Complemental strand, 23800195 - 23800059
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggagggg--tgatttaagatcaatttttgacctagaatcacacctctgcatcttttttccccttt 480  Q
    ||||||||||||||| |||| | |||| ||||||| ||||||  || ||| || | | ||||||||||| ||| || | ||| |||||||||||| ||||    
T  23800195 ttctctctaaattttttttctccttcattcatcgaagaggggggtggttttaggttattttttgacctaaaattactcttctacatcttttttcctcttt 23800096  T
Q  481 -ctttcaatctaaattagtgattttcacatacatcaa 516  Q
     |||||||||||||| |||| |||| ||||| |||||    
T  23800095 tctttcaatctaaataagtggtttttacatatatcaa 23800059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 439 - 516
Target Start/End: Complemental strand, 52116238 - 52116161
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| |||||||||||  | |||||||||||||| |||||| ||| ||| ||||| ||||||||||||||| |||||    
T  52116238 tttttaacctagaatcattcatctgcatctttttttccctttgttttaatttaaataagtgattttcacatatatcaa 52116161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 439 - 510
Target Start/End: Original strand, 3785714 - 3785784
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||||| ||||||||||| |||||||||||||| || |||||||||||  |||| ||||||||| |||||    
T  3785714 tttttgacttagaatcacacatctgcatctttttt-ccgtttctttcaattcaaataagtgatttttacata 3785784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 494
Target Start/End: Original strand, 4821623 - 4821725
Alignment:
Q  394 ttttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccc--tttctttcaatcta 491  Q
    ||||||||| |||||| || ||||| ||||||| ||| || ||| ||||||||||| |||||| ||||||||||  |||||| |  ||| ||||||||||    
T  4821623 ttttctttctctttcattcgtcgagaaggggtggttttaggtcattttttgacctataatcactcctctgcatccattttcctctttttttttcaatcta 4821722  T
Q  492 aat 494  Q
    |||    
T  4821723 aat 4821725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 438 - 516
Target Start/End: Complemental strand, 20465197 - 20465120
Alignment:
Q  438 atttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||| ||||||||| ||||| | ||||||| ||||||| ||||||| ||||| ||||||||| ||||| |||||    
T  20465197 atttttgacatagaatcacccctctccctcttttt-cccctttttttcaatataaataagtgattttaacatatatcaa 20465120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 447 - 499
Target Start/End: Complemental strand, 953619 - 953566
Alignment:
Q  447 ctagaatcacacctctgcatctt-ttttcccctttctttcaatctaaattagtg 499  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||| ||||    
T  953619 ctagaatcactcctctgcatctttttttcccttttctttcaatctaaataagtg 953566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 439 - 516
Target Start/End: Original strand, 1649278 - 1649358
Alignment:
Q  439 tttttgacctagaatcacacctctgca--tcttttttcc-cctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||||||||| | ||||||  | |||||||  ||||||||||||||||||| |||| |||||||||| |||||    
T  1649278 tttttgacctagaatcactcatctgcaatttttttttcttcctttctttcaatctaaataagtggttttcacatatatcaa 1649358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 510
Target Start/End: Complemental strand, 25631719 - 25631646
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||||||||||||| |||||  ||||| |||||||||  | || | ||||||||||||| |||||||||||||||    
T  25631719 tcaatttttgacctaaaatcatccctctccatcttttt--ctctctatttcaatctaaataagtgattttcacata 25631646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 505
Target Start/End: Complemental strand, 7449200 - 7449063
Alignment:
Q  368 gagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatc 467  Q
    |||||||||||   |||||||| || |||| |||| |||||  ||||  ||||||| || ||| || ||| |||||||| |||||||   ||||| ||||    
T  7449200 gagagaaactccaacttctctcaaactttt-tttctctttcgttcattaaggagggctggttttaggtcattttttgacatagaatcgtccctctacatc 7449102  T
Q  468 ttttttccccttt-ctttcaatctaaattagtgattttc 505  Q
    |||||||| |||| |||||||||||||| |||| |||||    
T  7449101 ttttttcctcttttctttcaatctaaataagtggttttc 7449063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 505
Target Start/End: Complemental strand, 7457342 - 7457205
Alignment:
Q  368 gagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatc 467  Q
    |||||||||||   |||||||| || |||| |||| |||||  ||||  ||||||| || ||| || ||| |||||||| |||||||   ||||| ||||    
T  7457342 gagagaaactccaacttctctcaaactttt-tttctctttcgttcattaaggagggctggttttaggtcattttttgacatagaatcgtccctctacatc 7457244  T
Q  468 ttttttccccttt-ctttcaatctaaattagtgattttc 505  Q
    |||||||| |||| |||||||||||||| |||| |||||    
T  7457243 ttttttcctcttttctttcaatctaaataagtggttttc 7457205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 443
Target Start/End: Original strand, 14859273 - 14859362
Alignment:
Q  354 cctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt 443  Q
    |||| |||||||| ||||||||||    ||||||||||| ||||| |||  ||||||| || ||||||||||||||| || ||| |||||    
T  14859273 cctagttttttagcgagagaaacttcaacttctctctaagttttcattctttttcacttattgaggaggggtgattttaggtcatttttt 14859362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 455
Target Start/End: Original strand, 38545639 - 38545712
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatca 455  Q
    |||||||||||| |||||||| | |||  |||| |||||| |||| ||| || ||| |||||||||||||||||    
T  38545639 cttctctctaaactttctttctccttcgttcattgaggagtggtggttttaggtcattttttgacctagaatca 38545712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 14464390 - 14464463
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||  |||||| ||| | |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  14464390 tcaattcttgacctgaaatcacccctattcatcttttt--ctctttatttcaatctaaataagtgattttcacata 14464463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Complemental strand, 44907591 - 44907518
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||  |||||| ||||| |||||||||  | |||| ||||||||||||  |||||||||||||||    
T  44907591 tcaattcttgacctgaaatcacccctcttcatcttttt--ctctttatttcaatctaaacaagtgattttcacata 44907518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 506
Target Start/End: Complemental strand, 50611609 - 50611540
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttca 506  Q
    |||||| |||||||| |||||| ||||| |||||||||  | || | ||||||||||||| |||||||||||    
T  50611609 tcaattattgacctaaaatcacccctcttcatcttttt--ctctatatttcaatctaaataagtgattttca 50611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 2e-54; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 344 - 516
Target Start/End: Complemental strand, 10237535 - 10237364
Alignment:
Q  344 aatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt 443  Q
    ||||||| ||||||||||||||| |||||||||| || ||||||| ||| ||||||| | ||||||||||||||| || |||||||| || |||||||||    
T  10237535 aatagcccgccctaattttttagtgagagaaactttg-cttctctttaagttttcttcctctttcactcatcgagtagaggtgattttaggtcaattttt 10237437  T
Q  444 gacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10237436 gacctagaatcacccctctacatcttttttcccctttctttcaatctaaataagtgattttcacatacatcaa 10237364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 353 - 516
Target Start/End: Original strand, 3308724 - 3308887
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    |||||||||||||  |||| ||||| ||||||| |||||| |||| || | ||| ||||| ||||||||||||||||| || ||||||||||||||||||    
T  3308724 ccctaattttttactgagaaaaactttgtcttccctctaagtttttttcctcttccactcgtcgaggaggggtgattttaggtcaatttttgacctagaa 3308823  T
Q  453 tcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  3308824 tcacccctttgcatcttttttcccctttatttcaatctaaataagtgattttcacatacatcaa 3308887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 352 - 516
Target Start/End: Original strand, 14955307 - 14955471
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| ||||||||  ||| ||||||| ||||||||  || ||||||| | ||||||||||||||||||||||||||| |  |||||||||||||||||    
T  14955307 gccctagttttttagtaagataaactctatcttctcttaaagttttcttcctctttcactcatcgaggaggggtgattttaagtcaatttttgacctaga 14955406  T
Q  452 atcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||  |||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||    
T  14955407 atcatccctctgcatcttttttcctctttctttcaatctaaataagtgatttccacatacatcaa 14955471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 359 - 507
Target Start/End: Complemental strand, 32448929 - 32448782
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| ||||||||||||  ||||||| ||||||||  ||  ||||||||||||||||||||||| ||| || ||| | ||||||||| |||||| |    
T  32448929 ttttttagtgagagaaactctaacttctctttaaatttttcttttctttcactcatcgaggaggggtggttttaggtcattatttgacctaaaatcaccc 32448830  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcac 507  Q
    |||||||||| |||||||||||||||| |||||||| ||||||||||||    
T  32448829 ctctgcatct-ttttcccctttctttcgatctaaataagtgattttcac 32448782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 352 - 516
Target Start/End: Complemental strand, 12648239 - 12648075
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| ||||| || |||||||||||   ||||||| ||| ||||||||| |||| |||| | ||||||||||| ||| || ||| |||||||||||||    
T  12648239 gccctagtttttaagtgagagaaactccaacttctctttaagttttctttctcttttactcgttgaggaggggtggttttaggtcattttttgacctaga 12648140  T
Q  452 atcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| ||||  ||||||||||| | ||||||||||||||||| |||||||| |||||| |||||    
T  12648139 atcacccctccacatcttttttctcttttctttcaatctaaataagtgatttccacatatatcaa 12648075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 352 - 509
Target Start/End: Original strand, 4098887 - 4099045
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||||||| | |||||||||   |||||||||||| |||||||| |||||  |||||||||| |||||  || || ||| |||||||||||||    
T  4098887 gccctagttttttagtgggagaaactccaacttctctctaaactttctttctctttccttcatcgaggaagggtggctttaggtcattttttgacctaga 4098986  T
Q  452 atcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    ||||| | ||| |||||||||||||| ||||||||||||||||| |||| |||||||||    
T  4098987 atcacccatctacatcttttttccccttttctttcaatctaaataagtggttttcacat 4099045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 382 - 516
Target Start/End: Original strand, 37994089 - 37994222
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttc 481  Q
    ||||||||||  ||||||||| |||||| |||||||||| ||||| ||| || ||| |||||||||||||||||| ||||||||| || |||||||||||    
T  37994089 cttctctctaggttttctttctctttcaatcatcgaggaagggtggttttaggtca-tttttgacctagaatcacccctctgcattttgtttcccctttc 37994187  T
Q  482 tttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||| || ||||| ||||||||||||||| |||||    
T  37994188 tttcgatttaaataagtgattttcacatagatcaa 37994222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 368 - 509
Target Start/End: Original strand, 18763268 - 18763409
Alignment:
Q  368 gagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatc 467  Q
    |||||||||||   |||||||||||| |||||||| | ||||  |||||||||| |||| ||| |  ||| |||||||||||||||||| ||||| ||||    
T  18763268 gagagaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggtggttttatgtcattttttgacctagaatcacccctctacatc 18763367  T
Q  468 ttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||||||| ||||||||||||||||| |||| |||||||||    
T  18763368 ttttttcccttttctttcaatctaaataagtggttttcacat 18763409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 353 - 516
Target Start/End: Complemental strand, 29574945 - 29574784
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    ||||| |||||||| ||||||||||||  ||||| |  || |||| |||| ||||||||| ||||||||||||| ||| |||||| ||||||||||||||    
T  29574945 ccctagttttttagtgagagaaactctaacttcttt--aagttttatttctctttcactcgtcgaggaggggtggttttagatcattttttgacctagaa 29574848  T
Q  453 tcacacctctgcat-cttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||| ||| ||||| |||||||||  ||||||||||||||||| |||||||| |||||| |||||    
T  29574847 tcac-cctgtgcatccttttttccattttctttcaatctaaataagtgatttccacatatatcaa 29574784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 346 - 509
Target Start/End: Original strand, 4778531 - 4778695
Alignment:
Q  346 tagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttga 445  Q
    ||||| |||||| |||||||| | |||||||||   ||||| |||||| |||||||| | |||  |||||||||||||||| ||| || ||| |||||||    
T  4778531 tagccggccctagttttttagtgggagaaactccaacttctttctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttga 4778630  T
Q  446 cctagaatcacacctctgcatc-ttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||||||||| ||||| |||| ||||||||| ||||||||||| ||||| |||| |||||||||    
T  4778631 cctagaatcacccctctacatctttttttcccttttctttcaatttaaataagtggttttcacat 4778695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 346 - 509
Target Start/End: Original strand, 7448026 - 7448189
Alignment:
Q  346 tagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttga 445  Q
    |||||||||||| |||| ||| | |||||||||   |||||||||||| |||||||  | |||  |||||||||||||||| ||| || ||| ||||||     
T  7448026 tagccagccctagttttctagtgggagaaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggtggttttaggtcattttttgt 7448125  T
Q  446 cctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||||||||| ||||| ||||||||| ||| ||||||||||||||||| | || |||||||||    
T  7448126 cctagaatcacccctctacatctttttccccttttctttcaatctaaataaatggttttcacat 7448189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 353 - 509
Target Start/End: Original strand, 31788241 - 31788398
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    |||||||||| ||| |||||||||||   |||||||||||| ||||||||   |||  ||||||||||| || | ||| || | | ||||||||||||||    
T  31788241 ccctaattttctagtgagagaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggcggttttaggtaattttttgacctagaa 31788340  T
Q  453 tcacacctctgcatcttttttccc-ctttctttcaatctaaattagtgattttcacat 509  Q
    |||| ||||| |||||||||||||  ||||||||||||||||| ||||||||||||||    
T  31788341 tcacccctctacatcttttttcccattttctttcaatctaaataagtgattttcacat 31788398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 352 - 509
Target Start/End: Original strand, 7646256 - 7646415
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||| ||| | |||||||||   |||||||||||| |||||||| | |||  |||||||||||||||| ||| || ||| |||||||||||||    
T  7646256 gccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctaga 7646355  T
Q  452 atcacacctctgcatctttttt--cccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||| ||||| ||||||||||  ||| |||||||| |||||||| |||| |||||||||    
T  7646356 atcacccctctacatctttttttccccttttctttcgatctaaataagtggttttcacat 7646415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 382 - 503
Target Start/End: Complemental strand, 27097690 - 27097569
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccc-ttt 480  Q
    |||||||||||| |||||||| | |||  |||||||||||||||||||| || ||| |||||||||||||||||| ||||| |||||||||||||| |||    
T  27097690 cttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatcac-cctctacatcttttttcccctttt 27097592  T
Q  481 ctttcaatctaaattagtgattt 503  Q
    ||||  |||||||| ||||||||    
T  27097591 cttttgatctaaataagtgattt 27097569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 368 - 516
Target Start/End: Complemental strand, 11985529 - 11985381
Alignment:
Q  368 gagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatc 467  Q
    |||||||||||   |||||||||||| |||||||| |||||| || |||||||| |||| ||| |  ||| ||||| |||||||||||| ||||| || |    
T  11985529 gagagaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggtggttttaagtcattttttaacctagaatcacccctctacaac 11985430  T
Q  468 ttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| ||| ||||||||||| ||||| |||| |||||||||| |||||    
T  11985429 tttttccccttttctttcaatttaaataagtggttttcacatatatcaa 11985381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 344 - 516
Target Start/End: Complemental strand, 43397442 - 43397271
Alignment:
Q  344 aatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt 443  Q
    ||||||| |||||| |||| ||| |||||||||||   ||||||| |||| |||||||    |||  |||||||| ||||||| ||| || ||| |||||    
T  43397442 aatagccggccctagttttctagtgagagaaactccaacttctctttaaactttcttttttcttcgttcatcgagaaggggtggttttaggtcatttttt 43397343  T
Q  444 gacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||||  |||| ||||||||| ||| ||||||||||||||||| |||| |||||||||| |||||    
T  43397342 gacctagaatcacctctctacatcttttt-cccttttctttcaatctaaataagtggttttcacatatatcaa 43397271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 382 - 509
Target Start/End: Complemental strand, 9169542 - 9169415
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttccccttt- 480  Q
    |||||||||||| |||||||| | |||  | |||||||||||||| ||| || ||| |||||||||||||||||| ||||| ||| |||||| ||||||     
T  9169542 cttctctctaaactttctttctcattcgtttatcgaggaggggtggttttaggtca-tttttgacctagaatcacccctctacatttttttttccctttt 9169444  T
Q  481 ctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||||| |||| |||||||||    
T  9169443 ctttcaatctaaataagtggttttcacat 9169415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 362 - 494
Target Start/End: Complemental strand, 5428173 - 5428039
Alignment:
Q  362 tttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctc 461  Q
    ||||| |||||||||||   ||||||||||||||||||||| | |||  |||||||||||||||| ||| || | ||||||||||||||| |||    ||    
T  5428173 tttagagagagaaactccaacttctctctaaattttctttctccttcgttcatcgaggaggggtggttttaggttaatttttgacctagagtcatcgttc 5428074  T
Q  462 tgcatcttttttcccc--tttctttcaatctaaat 494  Q
    | ||||||||||||||  |||||||||||||||||    
T  5428073 tacatcttttttcccctttttctttcaatctaaat 5428039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 382 - 516
Target Start/End: Original strand, 24461253 - 24461385
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttc 481  Q
    ||||||||||| ||||  ||| |||||||||||  |||||||||| ||| || ||| |||||||||||||||||| ||||||||||  ||||| |  ||     
T  24461253 cttctctctaagtttttattctctttcactcattaaggaggggtggttttaggtcattttttgacctagaatcactcctctgcatccgttttctc--ttt 24461350  T
Q  482 tttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||| |||||||| |||||| |||||    
T  24461351 tttcaatctaaataagtgatttccacatatatcaa 24461385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 346 - 472
Target Start/End: Complemental strand, 12677617 - 12677491
Alignment:
Q  346 tagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttga 445  Q
    ||||| |||||| |||| ||| |||||||||||   |||||||||||| |||||||| | ||   |||||||||||||||  |||||| ||| |||||||    
T  12677617 tagccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtagtttaaggtcattttttga 12677518  T
Q  446 cctagaatcacacctctgcatcttttt 472  Q
    ||||||||||| ||||| |||||||||    
T  12677517 cctagaatcacccctctacatcttttt 12677491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 352 - 509
Target Start/End: Complemental strand, 36943439 - 36943281
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||| ||| |||||||||||    || |||||||| |||||||| | |||  | |||||||||||||| ||| || ||| |||||||||||||    
T  36943439 gccctagttttctagtgagagaaactccaatttatctctaaactttctttctccttcgttgatcgaggaggggtggttttaggtcattttttgacctaga 36943340  T
Q  452 atcacacctctgcatcttttttcc-cctttctttcaatctaaattagtgattttcacat 509  Q
    |||||  |||| |||||||||||| | ||||||||||||||||| |||  |||||||||    
T  36943339 atcaccactctacatcttttttcctcttttctttcaatctaaataagtagttttcacat 36943281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 382 - 509
Target Start/End: Complemental strand, 37876883 - 37876755
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttccc-cttt 480  Q
    |||||||||||| ||||||||   |||  |||||||||||||||| ||| || |||||||||||||||||||||| | | | ||||||||| |||  |||    
T  37876883 cttctctctaaactttctttcttcttcgttcatcgaggaggggtggttttaggtcaatttttgacctagaatcacccttgtacatctttttccccttttt 37876784  T
Q  481 ctttcaatctaaattagtgattttcacat 509  Q
    |||| ||||||||| |||| |||||||||    
T  37876783 cttttaatctaaataagtggttttcacat 37876755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 368 - 509
Target Start/End: Complemental strand, 7678177 - 7678029
Alignment:
Q  368 gagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatc 467  Q
    |||||||||||   |||||||||||| |||||||| | |||  | ||||| |||||||| ||| || ||| |||||||||||||||||| ||||| ||||    
T  7678177 gagagaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggtggttttaggtcattttttgacctagaatcacccctctacatc 7678078  T
Q  468 ttttt-------tcccctttctttcaatctaaattagtgattttcacat 509  Q
    |||||       |||| ||||||||||||||||| |||| |||||||||    
T  7678077 tttttttttttctcccttttctttcaatctaaataagtggttttcacat 7678029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 350 - 508
Target Start/End: Complemental strand, 19029223 - 19029066
Alignment:
Q  350 cagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgaccta 449  Q
    |||||||| |||| ||| || |||||||||   ||||||||||  ||| |||| |||||  ||||||| || ||||| |||  ||||| |||||||||||    
T  19029223 cagccctagttttatagtgacagaaactctaatttctctctaagctttttttctctttcgttcatcgaagatgggtggttttggatca-tttttgaccta 19029125  T
Q  450 gaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||||||| | ||| ||||||||| ||||||  |||| |||||||| |||||||||||||    
T  19029124 gaatcacccatctccatctttttaccccttcttttcgatctaaataagtgattttcaca 19029066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 439 - 508
Target Start/End: Original strand, 1415436 - 1415505
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||||||| |||||||||| ||||| ||||||||||||| ||||||||||| ||||| |||||||||||||    
T  1415436 tttttgatctagaatcacccctctacatcttttttcccttttctttcaatttaaataagtgattttcaca 1415505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 383 - 508
Target Start/End: Complemental strand, 18108020 - 18107896
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttct 482  Q
    |||||||||| ||||||||| |||||| |||| |||||  |||| ||| || ||| ||||||||||||||||||  || |||||| |||| |||||||||    
T  18108020 ttctctctaagttttctttctctttcattcattgaggaatggtggttttaggtcattttttgacctagaatcacctctttgcatc-ttttacccctttct 18107922  T
Q  483 ttcaatctaaattagtgattttcaca 508  Q
    |||||  ||||| |||| ||||||||    
T  18107921 ttcaaattaaataagtggttttcaca 18107896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 441 - 509
Target Start/End: Complemental strand, 4041820 - 4041752
Alignment:
Q  441 tttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||||||| ||||| ||| ||||||||| ||||||||||||||||| |||| |||||||||    
T  4041820 tttgacctagaatcacccctctacattttttttcccgtttctttcaatctaaataagtggttttcacat 4041752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 383 - 509
Target Start/End: Original strand, 38444982 - 38445108
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttccc-ctttc 481  Q
    ||||||||||| |||||||| | |||  ||||||| ||| |||| ||| || ||| ||||||| |||||||||| ||||| |||||||||||||  ||||    
T  38444982 ttctctctaaactttctttctccttcgttcatcgatgagaggtggttttaggtca-tttttgatctagaatcacccctctacatcttttttccctttttc 38445080  T
Q  482 tttcaatctaaattagtgattttcacat 509  Q
    ||||||| ||||| |||| |||||||||    
T  38445081 tttcaatataaataagtggttttcacat 38445108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 359 - 509
Target Start/End: Original strand, 1421462 - 1421617
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatca-atttttgacctagaatcaca 457  Q
    |||| ||| |||||||||||   |||||| ||||| |||||||| | |||  |||||||||||||||| ||| || |||  |||||||  |||||||||     
T  1421462 ttttctagtgagagaaactccaacttctcgctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgatatagaatcacc 1421561  T
Q  458 cctctgcatctttttt----cccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||| ||||||||||    ||| ||||||||||||||||| |||| |||||||||    
T  1421562 cctctacatcttttttttcccccttttctttcaatctaaataagtggttttcacat 1421617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 370 - 499
Target Start/End: Original strand, 8809084 - 8809213
Alignment:
Q  370 gagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatctt 469  Q
    ||||||||||  |||||||||||| |||||||| | ||||  | |||||||  |||| ||| |||||| ||||||||||| |||||| ||||| ||||||    
T  8809084 gagaaactctaacttctctctaaactttctttctccttcatacgtcgaggacaggtggttttagatca-tttttgacctaaaatcacccctctacatctt 8809182  T
Q  470 ttttcc-cctttctttcaatctaaattagtg 499  Q
    |||||| | |||||||||||| |||| ||||    
T  8809183 ttttcctcttttctttcaatcaaaataagtg 8809213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 439 - 509
Target Start/End: Complemental strand, 19062580 - 19062510
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||||| |||||||||| ||||| |||| |||||||| ||||||||||||||||| |||| |||||||||    
T  19062580 tttttgaactagaatcacccctctacatcctttttcccttttctttcaatctaaataagtggttttcacat 19062510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 419 - 508
Target Start/End: Original strand, 6436459 - 6436548
Alignment:
Q  419 gaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    |||||||||||| || ||| |||||||| ||||||||| ||||||||  ||||| | | |||||||| |||||||| |||||||||||||    
T  6436459 gaggggtgattttaggtcattttttgacatagaatcacccctctgcacatttttcctcatttctttcgatctaaataagtgattttcaca 6436548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 419 - 510
Target Start/End: Original strand, 30420550 - 30420639
Alignment:
Q  419 gaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||||| |||  ||||||||||||||||  |||||| ||||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  30420550 gaggggtggttttggatcaatttttgacctgaaatcacccctcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 30420639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 516
Target Start/End: Original strand, 35220110 - 35220275
Alignment:
Q  347 agccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgac 446  Q
    |||| |||||| |||| ||| |||||||||||   | |||||||||| |||||||| | |||| |||||   |||||||| ||| || | | ||||||||    
T  35220110 agccggccctagttttctagtgagagaaactccaacctctctctaaactttctttctccttcattcatc---gaggggtggttttaggttattttttgac 35220206  T
Q  447 ctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||| ||||| ||||||||  |||| || ||  ||||||||| |||| |||||||||| |||||    
T  35220207 ctagaatcacccctctccatcttttccccccctt-ttcaaatctaaataagtggttttcacataaatcaa 35220275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 352 - 510
Target Start/End: Original strand, 19597663 - 19597820
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| ||| |||| |||||||||||   ||| ||||||| || |||||| ||| |||||||| | ||||  |||||| || | |  ||||||||||||    
T  19597663 gccctagtttattagtgagagaaactccaacttatctctaagttatctttctcttccactcatcaaagagga-tgattttaggttatcttttgacctaga 19597761  T
Q  452 atcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||| |  |||||||||||||| | |||||||| ||||| || |||||||| ||||||    
T  19597762 atcaccctcctgcatcttttttcgcatttctttcgatctacataagtgatttccacata 19597820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 508
Target Start/End: Complemental strand, 17995002 - 17994874
Alignment:
Q  381 tcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcc-cctt 479  Q
    ||||||||||||| |||||||| | |||  || |||| ||| |||| ||| || ||| |||||| |||| ||||||  |||||||||||||||||   ||    
T  17995002 tcttctctctaaactttctttctcattcggtcgtcgaagagaggtggttttaggtcattttttgccctaaaatcacctctctgcatcttttttcctattt 17994903  T
Q  480 tctttcaatctaaattagtgattttcaca 508  Q
    ||||||||||| ||| |||| ||||||||    
T  17994902 tctttcaatcttaataagtggttttcaca 17994874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 516
Target Start/End: Complemental strand, 29279884 - 29279721
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    |||||||||| | | |||||||||||   |||||||||||  |||||||| ||| || |||||||||| | | ||||| || ||| ||||||    | ||    
T  29279884 ccctaattttcttgtgagagaaactccaacttctctctaacctttctttctctt-cattcatcgaggatgagcgattttaggtcattttttgggtaaaaa 29279786  T
Q  453 tcacacctctgcatcttttttccccttt-ctttcaatctaaattagtgattttcacatacatcaa 516  Q
    || | ||||| |||||||||||| |||| |||||||||||||| |||| |||||||||| |||||    
T  29279785 tcgctcctctacatcttttttcctcttttctttcaatctaaataagtggttttcacatatatcaa 29279721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 435 - 494
Target Start/End: Original strand, 14423160 - 14423219
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaat 494  Q
    |||||||||||||||||||||| | ||||||||||| ||||| |||  ||||||||||||    
T  14423160 tcaatttttgacctagaatcactcgtctgcatctttcttcccatttacttcaatctaaat 14423219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 447 - 516
Target Start/End: Complemental strand, 19596095 - 19596027
Alignment:
Q  447 ctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||||| ||||| |||||| |  ||||||||||| ||||| ||||||||||||||| |||||    
T  19596095 ctagaatcacacctttgcatttttttttca-tttctttcaatgtaaataagtgattttcacatatatcaa 19596027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 459 - 516
Target Start/End: Complemental strand, 23933829 - 23933772
Alignment:
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||| |||||||||| |||||| ||||||||||||| ||||| ||||||||| |||||    
T  23933829 ctctacatctttttttccctttatttcaatctaaataagtgactttcacatatatcaa 23933772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 510
Target Start/End: Original strand, 37416516 - 37416644
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcat-cttttttccccttt 480  Q
    |||||||||||||||| |||  |||||| || |||| |||||||||||| || || ||||||| ||||||||||  | |||||||  ||||||| | |||    
T  37416516 cttctctctaaattttttttatctttcattcgtcgatgaggggtgattttaggtc-atttttgtcctagaatcatccttctgcatatttttttctcgttt 37416614  T
Q  481 ctttcaatctaaattagtgattttcacata 510  Q
    ||||  |||||||| | |||||||| ||||    
T  37416615 ctttgtatctaaataaatgattttcgcata 37416644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 516
Target Start/End: Complemental strand, 30400300 - 30400188
Alignment:
Q  406 ttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacc-tctgcatc-ttttttcccctttctttcaatctaaattagtgattt 503  Q
    |||| |||||||| || |||| ||| |||||| ||||||||||| |||||| || ||| |||| |||||| |  ||||||| ||||||||| |||| |||    
T  30400300 ttcattcatcgagaagaggtggttttagatcattttttgacctaaaatcactccatctacatcttttttttctttttcttttaatctaaataagtgtttt 30400201  T
Q  504 tcacatacatcaa 516  Q
    ||||||| |||||    
T  30400200 tcacatatatcaa 30400188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 510
Target Start/End: Original strand, 42949619 - 42949677
Alignment:
Q  451 aatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| ||||| ||||||||||| | ||| ||||||||||||| |||||||||||||||    
T  42949619 aatcacccctcttcatcttttttctc-tttatttcaatctaaataagtgattttcacata 42949677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 433 - 510
Target Start/End: Original strand, 4192726 - 4192801
Alignment:
Q  433 gatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||||||||||||||   ||||| ||||| |||||||||  | || | ||||||||||||| |||||||||||||||    
T  4192726 gatcaatttttgacctgagatcacccctcttcatcttttt--ctctatatttcaatctaaataagtgattttcacata 4192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 384 - 510
Target Start/End: Complemental strand, 28718230 - 28718106
Alignment:
Q  384 tctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctt 483  Q
    ||||| ||| ||||||||  |||| |||||| ||| ||||||| ||| || ||| |||||||| ||||||||  | |||||||||||||| |||||||||    
T  28718230 tctctttaagttttctttatctttaactcattgagaaggggtggttttaggtca-tttttgacatagaatcattcatctgcatctttttt-ccctttctt 28718133  T
Q  484 tcaatctaaattagtgattttcacata 510  Q
    || |  ||||| | |||||| ||||||    
T  28718132 tcgacataaataactgatttccacata 28718106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 510
Target Start/End: Complemental strand, 27249336 - 27249270
Alignment:
Q  442 ttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||||  |||||| ||||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  27249336 ttgacctgaaatcacccctcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 27249270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 516
Target Start/End: Original strand, 36691746 - 36691822
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| |||||||||||| ||||| | |||||| |||  ||||||||||||||||| ||||  ||||||||| |||||    
T  36691746 ttttttacctagaatcacccctctacttcttttctcctttttctttcaatctaaataagtg-gtttcacatatatcaa 36691822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 3725070 - 3725143
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||||||||||||| |||||  ||||| |||||||||  | || | ||||||| ||||| |||||||||||||||    
T  3725070 tcaatttttgacctaaaatcattcctcttcatcttttt--ctctctatttcaatataaataagtgattttcacata 3725143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Complemental strand, 21570600 - 21570527
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||  |||||| ||||| |||||||||  | || | ||||||||||||| |||||||||||||||    
T  21570600 tcaattcttgacctgaaatcacccctcttcatcttttt--ctctatatttcaatctaaataagtgattttcacata 21570527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 28227888 - 28227844
Alignment:
Q  464 catcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    |||||||| || | ||||||||||||||||| |||||||||||||    
T  28227888 catcttttctcgcttttctttcaatctaaataagtgattttcaca 28227844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 438 - 506
Target Start/End: Complemental strand, 33760425 - 33760358
Alignment:
Q  438 atttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttca 506  Q
    ||||||||| ||||||||| | ||| |||||||| |||| ||||||||||| ||||| | |||||||||    
T  33760425 atttttgacatagaatcacccatctacatcttttctccc-tttctttcaatttaaataaatgattttca 33760358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 451 - 510
Target Start/End: Original strand, 36233910 - 36233967
Alignment:
Q  451 aatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| ||||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  36233910 aatcacccctcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 36233967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 45128093 - 45128166
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||  |||||| ||||| |||||||||  | |||| ||||||||||||| ||||| |||||||||    
T  45128093 tcaattcttgacctgaaatcacccctcttcatcttttt--ctctttatttcaatctaaataagtgactttcacata 45128166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 1e-48; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 356 - 513
Target Start/End: Complemental strand, 34413402 - 34413244
Alignment:
Q  356 taattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatca 455  Q
    ||||||||||| ||||||||||||| ||||||||||| |||| |||| |||||||| |||||| ||||||||||| || ||||||||| | |||||||||    
T  34413402 taattttttagtgagagaaactctgccttctctctaagttttttttctctttcacttatcgagtaggggtgattttaggtcaattttttatctagaatca 34413303  T
Q  456 cacctctgcatctt-ttttcccctttctttcaatctaaattagtgattttcacatacat 513  Q
    | |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  34413302 cccctctgcatctttttttcccctttctttcaatctaaataagtgattttcacatacat 34413244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 345 - 516
Target Start/End: Original strand, 16161602 - 16161773
Alignment:
Q  345 atagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttg 444  Q
    ||||| |||||||||||| ||| |||||||||||||  |||||||||||||||||| | ||||||| |||||||||||||| |||| || ||||||||||    
T  16161602 atagctagccctaattttctagtgagagaaactctgcattctctctaaattttcttcctctttcacacatcgaggaggggtaattttaggtcaatttttg 16161701  T
Q  445 acctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||  |||| ||| ||||||| ||||| ||||||||||||| |||||||| ||||||||||||    
T  16161702 acctagaatcacctctcttcatattttttctcctttatttcaatctaaataagtgatttccacatacatcaa 16161773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 381 - 516
Target Start/End: Original strand, 48749996 - 48750130
Alignment:
Q  381 tcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttccccttt 480  Q
    |||||||||||| ||||||| | ||||||||||||||||||||||||| | || |||| ||||||||||||||||| ||| |||||||||||||||||||    
T  48749996 tcttctctctaagttttcttcctctttcactcatcgaggaggggtgatattaggtcaaattttgacctagaatcactcct-tgcatcttttttccccttt 48750094  T
Q  481 ctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||||| |||||||||||||||||||||    
T  48750095 ctttcaatctaaataagtgattttcacatacatcaa 48750130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 359 - 508
Target Start/End: Original strand, 49626694 - 49626843
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||| | |||||||||||   ||||||||||| | ||| ||| ||||||||||||||||||||||| ||| || ||| | ||||||||| |||||| |    
T  49626694 tttttttgtgagagaaactccaacttctctctaagtgttccttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcaccc 49626793  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  49626794 ctctgcatcttttttcccctttctttctatctaaataagtgattttcaca 49626843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 347 - 508
Target Start/End: Complemental strand, 34878591 - 34878430
Alignment:
Q  347 agccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgac 446  Q
    |||| |||||| |||| ||| |||||||||||   ||||||| |||| |||||||| |||||  |||||||||||||||| ||| || ||| ||||||||    
T  34878591 agccggccctagttttctagtgagagaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggtggttttaggtcattttttgac 34878492  T
Q  447 ctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    |||||||||| | ||| ||||||||||||  ||||||||||| ||||| |||| ||||||||    
T  34878491 ctagaatcactcatctacatcttttttccattttctttcaatttaaataagtggttttcaca 34878430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 344 - 509
Target Start/End: Original strand, 45789334 - 45789498
Alignment:
Q  344 aatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt 443  Q
    ||||||| ||| || |||||||| ||||||||||||   ||||||||||||||| ||||   |||| ||||||||||  | || ||| || ||| |||||    
T  45789334 aatagccggccttagttttttagtgagagaaactctacgttctctctaaattttatttctacttcattcatcgaggattgatggttttaggtcatttttt 45789433  T
Q  444 gacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| ||||| |||| |||||||||    
T  45789434 gacctagaatcacccctctgcatc-tttttcccctttctttcaatttaaataagtggttttcacat 45789498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 359 - 508
Target Start/End: Original strand, 44543057 - 44543204
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| |||||||||||   ||||||||||| ||||| ||| ||||||||||||||||| ||||| ||| || | | | ||||||||| |||||  |    
T  44543057 ttttttagtgagagaaactccaacttctctctaagttttccttctctttcactcatcgaggaagggtgcttttaggttattctttgacctaaaatca-gc 44543155  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  44543156 ctctgcatctttttt-ccctttctttcgatctaaataagtgattttcaca 44543204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 359 - 510
Target Start/End: Complemental strand, 10776768 - 10776614
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    ||||||||||||||||||||    ||||||||||| |||||||| | |||| |||||||||| ||||| ||| |||||| |||||||||||||||||| |    
T  10776768 ttttttagggagagaaactccaatttctctctaaactttctttctccttcattcatcgaggaagggtggttttagatcattttttgacctagaatcaccc 10776669  T
Q  459 ctctgcatcttttttcccc---tttctttcaatctaaattagtgattttcacata 510  Q
     ||| ||||||||||  ||   ||||||||||||||||| |||| |||| |||||    
T  10776668 atctacatcttttttttcctattttctttcaatctaaataagtggtttttacata 10776614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 352 - 516
Target Start/End: Original strand, 12634944 - 12635108
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||||||| |||||||||||   ||||||||||  |||| |||| ||||||||| ||||||| | ||| ||| || ||| ||| ||||||| |    
T  12634944 gccctagttttttagtgagagaaactcaaacttctctctatgttttttttctctttcactcgtcgaggatgtgtggttttaggtcattttctgacctata 12635043  T
Q  452 atcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| ||| |||||||||||||||  || | ||||||||||| ||||||||||||||| |||||    
T  12635044 atcacccctttgcatcttttttcccaattttgtcaatctaaataagtgattttcacatatatcaa 12635108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 362 - 509
Target Start/End: Complemental strand, 29738941 - 29738793
Alignment:
Q  362 tttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctc 461  Q
    ||||| |||||||||||   | |||||||||| |||||||| | |||  |||||||||||||||| ||| || ||||||||| |||||||||||| ||||    
T  29738941 tttagagagagaaactccaacatctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcaattttttacctagaatcacccctc 29738842  T
Q  462 tgcatcttttttccc-ctttctttcaatctaaattagtgattttcacat 509  Q
    | ||||||||| |||  ||||||||||||||||| |||| |||||||||    
T  29738841 tacatctttttcccctttttctttcaatctaaataagtggttttcacat 29738793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 352 - 516
Target Start/End: Complemental strand, 37720434 - 37720271
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    ||||||||| |||||||||||||||||| | |||| ||||| ||||||| | |||||||  || |||||| |||||| | || | |||||||||||| ||    
T  37720434 gccctaattctttagggagagaaactctctattctttctaagttttcttcctctttcacatatggaggagaggtgatcttaggttaatttttgaccttga 37720335  T
Q  452 atcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| | || | ||  |||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  37720334 atcac-cttcggtataatttttctcctttctttcaatctaaataagtgatttccacatacatcaa 37720271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 383 - 509
Target Start/End: Complemental strand, 11462732 - 11462604
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccc--ttt 480  Q
    ||||||||||| |||||||| | |||  |||| || |||||||||||| || | | |||||||||||||||||| ||||||||||||||||||||  |||    
T  11462732 ttctctctaaactttctttctccttcgttcattgacgaggggtgattttaggttattttttgacctagaatcacccctctgcatcttttttccccttttt 11462633  T
Q  481 ctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||||| ||||  ||||||||    
T  11462632 ctttcaatctaaataagtgggtttcacat 11462604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 360 - 509
Target Start/End: Original strand, 5983621 - 5983772
Alignment:
Q  360 tttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacc 459  Q
    ||||||| |||||||||| |  |||||||||||| ||| |||| | |||  ||||||||||||| || ||| |||||| |||||||||||||||||| |     
T  5983621 tttttagagagagaaactttaacttctctctaaactttatttctccttcgttcatcgaggagggatggttttagatcattttttgacctagaatcactcg 5983720  T
Q  460 tctgcatcttttttcccc--tttctttcaatctaaattagtgattttcacat 509  Q
    ||| ||||||||||||||  |||||||| |||||||| | || |||||||||    
T  5983721 tctacatcttttttcccctttttctttcgatctaaataaatggttttcacat 5983772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 411 - 509
Target Start/End: Original strand, 32394835 - 32394933
Alignment:
Q  411 tcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||||||| ||| || ||| |||||||| ||||||||  ||||||||||||||| ||| ||||||||||||||||| |||| |||||||||    
T  32394835 tcatcgaggaggggtggttttaggtcattttttgacttagaatcatccctctgcatctttttccccttttctttcaatctaaatgagtggttttcacat 32394933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 359 - 516
Target Start/End: Original strand, 1742065 - 1742222
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||| ||| |||||||||||   ||||| |||||| || ||||| |||||  ||||| ||||  |||| ||| || ||| |||||||||||||||||| |    
T  1742065 ttttctagtgagagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggtggttttaggtcattttttgacctagaatcaccc 1742164  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||| ||||||||  ||| ||||||||||||||||| |||| |||||||||| |||||    
T  1742165 ctctccatcttttcccccttttctttcaatctaaataagtggttttcacatatatcaa 1742222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 359 - 516
Target Start/End: Complemental strand, 15435180 - 15435023
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||  |||||||||||   |||||||| |||  |||||||   |||| ||||| |||||||| | ||| || ||| ||||||| |||||||||  |    
T  15435180 ttttttattgagagaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggcggttttaggtcattttttgatctagaatcaacc 15435081  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||| ||||||||||||| ||||||||||||||||| |||| |||||||||| |||||    
T  15435080 ctctacatcttttttcccttttctttcaatctaaataagtgtttttcacataaatcaa 15435023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 356 - 507
Target Start/End: Original strand, 21686654 - 21686804
Alignment:
Q  356 taattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatca 455  Q
    ||||||||||| ||||||||||    ||| | ||||||||||||||| |||||  ||||||||||| | |||||| || ||| ||||||| |||||||||    
T  21686654 taattttttagtgagagaaactgcaacttttttctaaattttctttctctttcgttcatcgaggagagatgattttaggtcattttttgatctagaatca 21686753  T
Q  456 cacctctgcatcttttttcccctttctttcaatctaaattagtgattttcac 507  Q
    |  |||| ||||||||||||  ||||||||||| ||||| |||| |||||||    
T  21686754 c-tctctacatcttttttccattttctttcaatttaaataagtggttttcac 21686804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 353 - 516
Target Start/End: Complemental strand, 32679413 - 32679250
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    ||||| |||||||| |||||||| ||   ||| ||||||| ||||||||| ||||||||| ||||||||||||| ||| |  ||| |||||||| |||||    
T  32679413 ccctagttttttagtgagagaaattccaacttttctctaagttttctttctctttcactcgtcgaggaggggtggttttatgtcattttttgacatagaa 32679314  T
Q  453 tcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||  |||||||| |  ||||  | ||||||||||| ||||| |||||||| |||||| |||||    
T  32679313 tcatccctctgcaccaattttatcttttctttcaatttaaataagtgatttccacatatatcaa 32679250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 344 - 509
Target Start/End: Complemental strand, 7337986 - 7337820
Alignment:
Q  344 aatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt 443  Q
    ||||||| |||||| |||| ||| || |||||||    |||||||||||| |||||||| | |||  ||||||||||||| || ||  |  ||| |||||    
T  7337986 aatagccggccctagttttctagtgaaagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggagggatggttctatgtcatttttt 7337887  T
Q  444 gacctagaatcacacctctgcatcttttttcc-cctttctttcaatctaaattagtgattttcacat 509  Q
    || |||||||||| ||||| |||||||||||| | ||||||||||||||||| |||| |||||||||    
T  7337886 gatctagaatcacccctctacatcttttttcctcttttctttcaatctaaataagtggttttcacat 7337820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 382 - 508
Target Start/End: Original strand, 18939129 - 18939254
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttc 481  Q
    ||||||||||| ||||||||| | |||| | ||||||||| |||| ||| || ||| ||||||| ||||||||||  ||||||||| |||||||||||||    
T  18939129 cttctctctaagttttctttctccttcattaatcgaggagaggtggttttaggtcattttttgatctagaatcacctctctgcatc-tttttcccctttc 18939227  T
Q  482 tttcaatctaaattagtgattttcaca 508  Q
    ||||||| ||||| |||  ||||||||    
T  18939228 tttcaatttaaataagtagttttcaca 18939254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 447 - 516
Target Start/End: Complemental strand, 36775935 - 36775867
Alignment:
Q  447 ctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  36775935 ctagaatcacccctctgcatcttttttccc-tttctttcaatctaaataaatgattttcacatacatcaa 36775867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 413 - 509
Target Start/End: Original strand, 45415397 - 45415494
Alignment:
Q  413 atcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||||| ||| || ||| ||||||| |||||||||| ||||| |||||||||||||| ||||||||||| ||||| |||| |||||||||    
T  45415397 atcgaggaggggtggttttaggtcattttttgatctagaatcacccctctacatcttttttccccttttctttcaatttaaataagtggttttcacat 45415494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 397 - 508
Target Start/End: Complemental strand, 31692733 - 31692623
Alignment:
Q  397 tctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaatta 496  Q
    |||||| ||||||||||||||||| | ||||||| || ||| |||||||||| ||||||| ||||||||| ||||||  |||||||||| |||||| | |    
T  31692733 tctttctctttcactcatcgaggatgtgtgattttaggtcattttttgaccttgaatcacccctctgcat-ttttttttcctttctttcgatctaagtaa 31692635  T
Q  497 gtgattttcaca 508  Q
     |||||||||||    
T  31692634 ttgattttcaca 31692623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 394 - 508
Target Start/End: Original strand, 34528538 - 34528650
Alignment:
Q  394 ttttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaa 493  Q
    ||||||||  |||||||||||||| || | ||| ||| |  ||| |||||||||||||||||| |||||||||||||||  ||||||||||| |||||||    
T  34528538 ttttctttttctttcactcatcgaagatgagtggttttatgtcattttttgacctagaatcacccctctgcatcttttt--ccctttctttcgatctaaa 34528635  T
Q  494 ttagtgattttcaca 508  Q
    | |||||||| ||||    
T  34528636 taagtgatttccaca 34528650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 516
Target Start/End: Original strand, 940149 - 940306
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| |||| |||||||   |||||||||||||||||||| ||||   |||||||||| | ||| ||| |  ||| ||||| |||||||||||| |    
T  940149 ttttttagtgagaaaaactctaaattctctctaaattttctttctcttttcttcatcgaggatgagtggttttaagtcatttttt-acctagaatcaccc 940247  T
Q  459 ctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacatacatcaa 516  Q
     |||||||||| ||||||| ||||||| ||| ||||| |||| |||||||||| |||||    
T  940248 atctgcatcttgtttccccttttcttttaatttaaataagtggttttcacatatatcaa 940306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 387 - 516
Target Start/End: Complemental strand, 23291925 - 23291793
Alignment:
Q  387 ctctaaattttctttccctttcactcatcgaggaggggtg---atttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctt 483  Q
    ||||||| |||||||| | |||  |||||||| | |||||   |||| || ||| |||||||||||||||||| ||||  ||||||||||| | ||||||    
T  23291925 ctctaaactttctttctccttcgttcatcgagaaagggtggttattttaggtcattttttgacctagaatcacccctcgacatcttttttctcttttctt 23291826  T
Q  484 tcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||| |||| |||||||||| |||||    
T  23291825 tcaatctaaataagtggttttcacatatatcaa 23291793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 360 - 516
Target Start/End: Original strand, 31983965 - 31984122
Alignment:
Q  360 tttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacc 459  Q
    ||||||| |||||||||||   |||||||||||| ||||||||   ||   ||||| ||||| |||| ||| || ||| |||||||||||||| |||  |    
T  31983965 tttttagtgagagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggtggttttaggtcattttttgacctagaagcacctc 31984064  T
Q  460 tctgcatc-ttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||| |||| ||||||||| |||||||| |||||||| |||| |||||||||| |||||    
T  31984065 tctacatctttttttcccttttctttcgatctaaataagtggttttcacatatatcaa 31984122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 486
Target Start/End: Complemental strand, 7837051 - 7836947
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttc 481  Q
    ||||||||||||  ||||||| |||||  |||||||||| ||||| ||| || ||| ||||||| |||||||||| ||||  ||||||||||||| ||||    
T  7837051 cttctctctaaaccttctttctctttcgttcatcgaggaagggtggttttaggtcattttttgatctagaatcacccctcgacatcttttttcccttttc 7836952  T
Q  482 tttca 486  Q
    |||||    
T  7836951 tttca 7836947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 440 - 510
Target Start/End: Original strand, 26535260 - 26535330
Alignment:
Q  440 ttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||||||||||||||||| ||| |||||||||  || ||||||||||||||||| |||| ||||||||||    
T  26535260 ttttgacctagaatcacacatctacatctttttctccttttctttcaatctaaataagtggttttcacata 26535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 383 - 516
Target Start/End: Original strand, 15836001 - 15836134
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttct 482  Q
    |||||||| || |||||||| |||| | ||||| ||||| |||| ||| || ||| ||||||||||||||||||  || | ||| |||||  || |||||    
T  15836001 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcaccgctatacatatttttctccttttct 15836100  T
Q  483 ttcaatctaaattagtgattttcacatacatcaa 516  Q
     ||||| ||||| |||| ||||||||||||||||    
T  15836101 atcaatttaaataagtggttttcacatacatcaa 15836134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 439 - 507
Target Start/End: Complemental strand, 569010 - 568943
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcac 507  Q
    ||||| |||||||||| | ||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  569010 ttttttacctagaatcccccctctacatcttttt-cccctttctttcaatctaaataagtgattttcac 568943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 387 - 516
Target Start/End: Original strand, 9341536 - 9341665
Alignment:
Q  387 ctctaaattttctttccctttcactcatcgaggagggg-tgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttc 485  Q
    |||||| | ||||||| |||||||||||||| |||||| || ||| || ||| |||||||| |||||||||   | ||||||||||| || |||||||||    
T  9341536 ctctaagtcttctttctctttcactcatcgaagagggggtggttttaggtcattttttgacttagaatcacctgtatgcatcttttt-cctctttctttc 9341634  T
Q  486 aatctaaattagtgattttcacatacatcaa 516  Q
    ||| ||||| ||  ||||||||||| |||||    
T  9341635 aatataaataagaaattttcacatatatcaa 9341665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 442 - 516
Target Start/End: Complemental strand, 13145036 - 13144962
Alignment:
Q  442 ttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||||  ||||| ||| ||||| ||||||||||||||||||||| |||| |||||| ||| |||||    
T  13145036 ttgacctagaatcatccctctacatatttttacccctttctttcaatctaaataagtggttttcatatatatcaa 13144962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 352 - 516
Target Start/End: Complemental strand, 51916967 - 51916802
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||||||| ||||||||||     || |||||||| |||||||| | |||  |||| ||||||||||| ||| ||   | ||||||||||| |    
T  51916967 gccctagttttttagtgagagaaacttcaatttttctctaaactttctttctccttcgttcatagaggaggggtggttttaggctattttttgacctaaa 51916868  T
Q  452 atcacacctctgcatcttttttccccttt-ctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| | ||| |||||||||| | |||| |||||||||||||| |||| |||||| ||| |||||    
T  51916867 atcactcatctacatctttttttctcttttctttcaatctaaataagtggttttcaaataaatcaa 51916802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 504
Target Start/End: Original strand, 14872423 - 14872570
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| |||||||||||   ||||| ||| || ||||||||   |||| |||||||| ||| ||| |||  | ||| |||||||| ||||||||| |    
T  14872423 ttttttagtgagagaaactccaacttctttctgaactttctttcttcttcattcatcgagaaggtgtggttttcggtcattttttgacttagaatcactc 14872522  T
Q  459 ctctgcatcttttttcccc--tttctttcaatctaaattagtgatttt 504  Q
    |||| |||||||||| |||  ||||||||||| ||||| |||| ||||    
T  14872523 ctctacatctttttttccctttttctttcaatgtaaataagtggtttt 14872570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 506
Target Start/End: Original strand, 43412183 - 43412301
Alignment:
Q  386 tctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttc 485  Q
    ||||||| || |||||| |||||| ||||||||||||||||| ||  | ||| |||||||| || |||||| ||| || ||||||||||| ||||||||     
T  43412183 tctctaacttctctttctctttcattcatcgaggaggggtgagttgtg-tca-tttttgacttaaaatcacccctatgtatcttttttcctctttctttt 43412280  T
Q  486 aatctaaattagtgattttca 506  Q
     || ||||| |||||||||||    
T  43412281 gatttaaataagtgattttca 43412301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 458
Target Start/End: Complemental strand, 6218142 - 6218036
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    ||||||||||||||| ||| |||| ||   ||||||||| |||| |||||  | || ||||||| ||||| | |||||| || ||| |||||||||||||    
T  6218142 gccctaattttttagtgagggaaattccaacttctctcttaattatctttttcattaactcatcaaggagagatgattttagttcattttttgacctaga 6218043  T
Q  452 atcacac 458  Q
    |||||||    
T  6218042 atcacac 6218036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 508
Target Start/End: Original strand, 31317559 - 31317684
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatca-cacctctgcatcttttttcccctttc 481  Q
    |||||||||||||||||||| |||||| ||||||||| |   || ||| || | | || ||||| |||||||| | |||||||||| ||||||| | |||    
T  31317559 ttctctctaaattttctttctctttcattcatcgaggcgttatggttttaggtaatttgttgacatagaatcacctcctctgcatc-tttttcctcattc 31317657  T
Q  482 tttcaatctaaattagtgattttcaca 508  Q
    ||||||| ||||| |||| ||||||||    
T  31317658 tttcaatttaaataagtggttttcaca 31317684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 449
Target Start/End: Complemental strand, 35484698 - 35484596
Alignment:
Q  347 agccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgac 446  Q
    |||| |||||| |||| ||| |||||||||||   |||||||||||| |||||||| | |||  |||||||||||||||| ||  || ||| ||||||||    
T  35484698 agccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttgtaggtcattttttgac 35484599  T
Q  447 cta 449  Q
    |||    
T  35484598 cta 35484596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 510
Target Start/End: Original strand, 44915452 - 44915582
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggagggg-tgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctt- 479  Q
    |||||||||||| |||||||| | |||| |||||||||||||| || ||| || ||| |||||| | || |||||   |||| |||||||||||| |||     
T  44915452 cttctctctaaactttctttctcattcattcatcgaggaggggttggttttaggtcattttttggcttaaaatcatcactctacatcttttttcctctta 44915551  T
Q  480 tctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||| |||| ||||| ||||    
T  44915552 tctttccatctaaataagtggttttcgcata 44915582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 516
Target Start/End: Original strand, 47132783 - 47132841
Alignment:
Q  458 cctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||||  ||||| |||||    
T  47132783 cctctgcatcctttttcccttttctttcaatctaaataagtgatttctacatatatcaa 47132841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 437 - 502
Target Start/End: Complemental strand, 13075865 - 13075800
Alignment:
Q  437 aatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgatt 502  Q
    |||||||||| |||||||   | ||||||||||||||| | ||||||||||||||||| |||||||    
T  13075865 aatttttgacatagaatcttccatctgcatcttttttctcatttctttcaatctaaataagtgatt 13075800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 346 - 509
Target Start/End: Complemental strand, 35462359 - 35462194
Alignment:
Q  346 tagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttg- 444  Q
    ||||| ||| || |||||||| | ||||||||||  ||| |||||||| |||||||| | |||  | || ||| | ||||| ||| || ||| |||||      
T  35462359 tagccggccttagttttttagtgggagaaactctaacttatctctaaactttctttctccttcgtttattgagaatgggtggttttaggtcatttttttt 35462260  T
Q  445 acctagaatcacacctctgcatcttttttccccttt-ctttcaatctaaattagtgattttcacat 509  Q
    || ||||||||  ||||| ||||||||||||||||| |||||||| ||||| |||| |||||||||    
T  35462259 acatagaatcatccctctacatcttttttccccttttctttcaatttaaataagtggttttcacat 35462194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 510
Target Start/End: Complemental strand, 25728151 - 25728078
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||  |||||| ||||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  25728151 tcaattcttgacctgaaatcactcctcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 25728078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 510
Target Start/End: Original strand, 27456405 - 27456477
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcc-cctttctttcaatctaaattagtgattttcacata 510  Q
    ||||| ||||| |||||| ||||| |||||||||||| | ||||||||||||||||| |||| ||||| ||||    
T  27456405 ttttttacctaaaatcactcctctacatcttttttcctcttttctttcaatctaaataagtggttttcgcata 27456477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 516
Target Start/End: Original strand, 15492113 - 15492232
Alignment:
Q  394 ttttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaa 493  Q
    ||||||||| |||| |||||| |||||| |||| ||| || ||  ||||||||||| |||||    | |||||||||||  || ||||||||||||||||    
T  15492113 ttttctttctcttttactcattgaggagaggtggttttaggtct-tttttgacctaaaatcatcattttgcatcttttt--ccatttctttcaatctaaa 15492209  T
Q  494 ttagtgattttcacatacatcaa 516  Q
    | | ||||||||||||| |||||    
T  15492210 taaatgattttcacatatatcaa 15492232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 455
Target Start/End: Complemental strand, 24012965 - 24012866
Alignment:
Q  356 taattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatca 455  Q
    ||||||||||| ||||||||||     |||| ||||| || |||||| |||||||||||||| ||  | |||||| |  |||||||||||||||||||||    
T  24012965 taattttttagtgagagaaacttcaaattctttctaagttctctttctctttcactcatcgacgatagatgattttatgtcaatttttgacctagaatca 24012866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 508
Target Start/End: Original strand, 19060721 - 19060835
Alignment:
Q  394 ttttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaa 493  Q
    ||||| ||| |||||||||||| || | ||||| ||| || | | | ||| | ||| |||||| | |||||||||||||| ||||||||||| || ||||    
T  19060721 ttttccttctctttcactcatcaagcacgggtggttttaggttattcttttatctaaaatcacccatctgcatctttttttccctttctttcgatttaaa 19060820  T
Q  494 ttagtgattttcaca 508  Q
    | || ||||||||||    
T  19060821 taagcgattttcaca 19060835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 421 - 510
Target Start/End: Complemental strand, 25406490 - 25406403
Alignment:
Q  421 ggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||||||||  | |||||| |||||||  |||||||||||| |||||||||  | || | ||||||||||||| ||||| |||||||||    
T  25406490 ggggtgattttgggtcaattcttgacctgaaatcacacctcttcatcttttt--ctctctatttcaatctaaataagtgactttcacata 25406403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 499
Target Start/End: Complemental strand, 36894497 - 36894408
Alignment:
Q  411 tcatcgaggaggggtgatt-taagatcaatttttgacctagaatcacacctctgcatcttttttcc-cctttctttcaatctaaattagtg 499  Q
    ||||||| |||||||| || |||| ||| ||||||||||||| |||| ||||| |||||||||||| | |||||||| |||||||| ||||    
T  36894497 tcatcgaagaggggtggttctaag-tcattttttgacctagagtcacccctctacatcttttttcctcttttctttcgatctaaataagtg 36894408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 516
Target Start/End: Complemental strand, 27580357 - 27580277
Alignment:
Q  438 atttttgacctagaatcacacctctgcatc--ttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||||||||  ||||| ||||  ||||||  |||||| ||||||||| || |||| |||||||||| |||||    
T  27580357 atttttgacctagaatcatccctctacatcttttttttttcctttcattcaatctatataagtggttttcacatatatcaa 27580277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 516
Target Start/End: Original strand, 31918874 - 31918931
Alignment:
Q  460 tctgcatcttttttccccttt-ctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||||||| |||| || ||||||||||| |||| |||||||||| |||||    
T  31918874 tctgcatcttttttcctcttttctatcaatctaaataagtggttttcacatatatcaa 31918931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 508
Target Start/End: Original strand, 34479329 - 34479425
Alignment:
Q  411 tcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    |||||||||||||  ||||| || ||| ||||| |  ||||||||  | |||||||||||||| |||||||||| ||| ||||| |||| ||||||||    
T  34479329 tcatcgaggagggacgattttaggtcattttttaatttagaatcattcgtctgcatctttttt-ccctttcttttaatttaaataagtggttttcaca 34479425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 509
Target Start/End: Complemental strand, 35484589 - 35484548
Alignment:
Q  468 ttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||||||| ||||||||||||||||| |||| |||||||||    
T  35484589 ttttttcccttttctttcaatctaaataagtggttttcacat 35484548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 20266191 - 20266264
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||| ||| |||||| | ||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  20266191 tcaattcttgatctaaaatcacccatcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 20266264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 510
Target Start/End: Complemental strand, 35584829 - 35584740
Alignment:
Q  419 gaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||||||||||  | |||||| || ||||  |||||| | ||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  35584829 gaggggtgattttgggtcaattcttaacctgaaatcactcatcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 35584740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 51871753 - 51871826
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||| |||||| ||||| |||||||||  | || | ||||||||||||| ||||| |||||||||    
T  51871753 tcaattcttgacctaaaatcacccctcttcatcttttt--ctctctatttcaatctaaataagtgactttcacata 51871826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 4e-46; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 354 - 516
Target Start/End: Complemental strand, 18891015 - 18890854
Alignment:
Q  354 cctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaat 453  Q
    ||||||||||||| |||||||||| | |||||| | ||| ||||||| | |||||||| |||||| ||||||||||| || |||||||||||||||||||    
T  18891015 cctaattttttagtgagagaaacttt-tcttctttttaagttttcttcctctttcacttatcgagaaggggtgattttaggtcaatttttgacctagaat 18890917  T
Q  454 cacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||| | ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  18890916 cactcatctgcatcttttttcccctttctttcaatctaaataagtgattttcacatgcatcaa 18890854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 359 - 516
Target Start/End: Original strand, 14585485 - 14585640
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||| | ||||||||||||||||||||||||| ||||||| | ||||||||||||||||| |||||||||    ||||   ||||||||||||||| |    
T  14585485 tttttttgtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgaggatgggtgatttg---tcaaaaattgacctagaatcaccc 14585581  T
Q  459 ctctgcatcttttttccccttt-ctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||||| | |||| |||||||||||||| |||||||||||||||||||||    
T  14585582 ctctgcatctttttttctcttttctttcaatctaaataagtgattttcacatacatcaa 14585640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 352 - 516
Target Start/End: Original strand, 41896286 - 41896451
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctt---tcc-ctttcactcatcgaggaggggtgatttaagatcaatttttgacc 447  Q
    ||||||||||||||| |||||||||| ||| |||||||||| |||||||   ||| ||||||||||||||||| | ||||||| || |||||||||||||    
T  41896286 gccctaattttttagtgagagaaactttgtattctctctaagttttcttccttcctctttcactcatcgaggatgagtgattttaggtcaatttttgacc 41896385  T
Q  448 tagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||| | | ||||   ||||| |||||||||||||||||||| |||||||||||||| ||||||    
T  41896386 tagaatcacccatttgca---ttttttccctttctttcaatctaaataagtgattttcacatccatcaa 41896451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 352 - 509
Target Start/End: Complemental strand, 31013884 - 31013726
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||| ||| |||||||||||   |||||||||||| |||||||| | |||  |||||||||||||||| ||| || ||| |||||||||||||    
T  31013884 gccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctaga 31013785  T
Q  452 atcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    ||||| ||||| ||||||||| |||| ||||||||||||||||| |||| |||||||||    
T  31013784 atcacccctctacatctttttcccccttttctttcaatctaaataagtggttttcacat 31013726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 359 - 503
Target Start/End: Original strand, 8980980 - 8981125
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| |||||||||||   ||||||||||| ||||| ||| | ||||||| ||||||||||||| ||| || ||| ||||||||||| |||||| |    
T  8980980 ttttttagtgagagaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcaccc 8981079  T
Q  459 ctctgcatcttttttcccc-tttctttcaatctaaattagtgattt 503  Q
    || |||||| ||||||||| ||||||||||||||||| ||||||||    
T  8981080 ctatgcatcctttttccccttttctttcaatctaaataagtgattt 8981125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 359 - 508
Target Start/End: Complemental strand, 25191372 - 25191223
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| |||||||||||   |||||||||||| |||||||| | ||   ||||||||||| |||||||| || ||| |||||||||||||||||| |    
T  25191372 ttttttagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggtgattttaggtcattttttgacctagaatcaccc 25191273  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
     ||| ||||||||||||| ||||||||||  ||||| |||||||||||||    
T  25191272 atctacatcttttttcccttttctttcaaattaaataagtgattttcaca 25191223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 360 - 508
Target Start/End: Original strand, 15344090 - 15344238
Alignment:
Q  360 tttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacc 459  Q
    ||||||| |||||||||||   ||||||||||| ||||  ||| ||||||||||||||||||||||| ||| || ||| | ||||||||| ||| || ||    
T  15344090 tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc 15344189  T
Q  460 tctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||||||||||||||||||||| | |  |||||||| |||||||||||||    
T  15344190 tctgcatcttttttcccctttatatggatctaaataagtgattttcaca 15344238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 360 - 508
Target Start/End: Original strand, 15433155 - 15433303
Alignment:
Q  360 tttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacc 459  Q
    ||||||| |||||||||||   ||||||||||| ||||  ||| ||||||||||||||||||||||| ||| || ||| | ||||||||| ||| || ||    
T  15433155 tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc 15433254  T
Q  460 tctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||||||||||||||||||||| | |  |||||||| |||||||||||||    
T  15433255 tctgcatcttttttcccctttatatggatctaaataagtgattttcaca 15433303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 360 - 508
Target Start/End: Original strand, 15524459 - 15524607
Alignment:
Q  360 tttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacc 459  Q
    ||||||| |||||||||||   ||||||||||| ||||  ||| ||||||||||||||||||||||| ||| || ||| | ||||||||| ||| || ||    
T  15524459 tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc 15524558  T
Q  460 tctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||||||||||||||||||||| | |  |||||||| |||||||||||||    
T  15524559 tctgcatcttttttcccctttatatggatctaaataagtgattttcaca 15524607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 368 - 509
Target Start/End: Original strand, 37971087 - 37971226
Alignment:
Q  368 gagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatc 467  Q
    |||||||||||   |||||||||||||||||||||   |||| ||||||||||| |||   || || ||| |||||||||||||||||| ||||| ||||    
T  37971087 gagagaaactccaacttctctctaaattttctttcttcttcattcatcgaggagtggt---tttaggtcattttttgacctagaatcacccctctacatc 37971183  T
Q  468 ttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  37971184 ttttttccccttttctttcaatctaaataagtgattttcacat 37971226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 382 - 508
Target Start/End: Complemental strand, 1239686 - 1239560
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttc 481  Q
    ||||||||||| ||||| ||| ||| | ||||||||||||||||| ||| || ||  | ||||||||| |||||| ||||||||||||||||||||||||    
T  1239686 cttctctctaagttttccttctcttccgctcatcgaggaggggtggttttaggtccttctttgacctaaaatcacccctctgcatcttttttcccctttc 1239587  T
Q  482 tttcaatctaaattagtgattttcaca 508  Q
     ||| |||||||| |||||||||||||    
T  1239586 gttcgatctaaataagtgattttcaca 1239560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 362 - 506
Target Start/End: Original strand, 23230430 - 23230575
Alignment:
Q  362 tttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctc 461  Q
    ||||| |||||||||||   |||||||||||| |||||||| | |||  |||||||||| ||||| |||| | ||||||||||||| | |||||| ||||    
T  23230430 tttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtgttttagg-tcaatttttgaccaaaaatcacccctc 23230528  T
Q  462 tgcatcttttttcccc--tttctttcaatctaaattagtgattttca 506  Q
    | ||||||||||||||  ||||||||||||||||| |||| ||||||    
T  23230529 tacatcttttttcccctttttctttcaatctaaataagtggttttca 23230575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 411 - 509
Target Start/End: Complemental strand, 20553499 - 20553401
Alignment:
Q  411 tcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||||||| ||| |||||| |||| ||||||||||||| || |  ||| ||||||||| ||||||||||||||||| ||||||||||||||    
T  20553499 tcatcgaggaggggtggttttagatcatttttggacctagaatcaccccacaacattttttttcccttttctttcaatctaaataagtgattttcacat 20553401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 359 - 509
Target Start/End: Complemental strand, 20560050 - 20559901
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||| ||||||||||||| |   |||||||||||| ||| ||||   |||  ||||||| |||||||| ||| |||||| |||| ||||||||||||| |    
T  20560050 ttttctagggagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcaccc 20559951  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    |||| ||| ||||| ||| ||||||||||||||||| ||||||||||||||    
T  20559950 ctctacat-tttttccccttttctttcaatctaaataagtgattttcacat 20559901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 359 - 509
Target Start/End: Complemental strand, 20571612 - 20571463
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||| ||||||||||||| |   |||||||||||| ||| ||||   |||  ||||||| |||||||| ||| |||||| |||| ||||||||||||| |    
T  20571612 ttttctagggagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcaccc 20571513  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    |||| ||| ||||| ||| ||||||||||||||||| ||||||||||||||    
T  20571512 ctctacat-tttttccccttttctttcaatctaaataagtgattttcacat 20571463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 340 - 442
Target Start/End: Original strand, 39655275 - 39655377
Alignment:
Q  340 aaacaatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaat 439  Q
    ||||||||| | |||||||||||| || |||||||||||| |||||||||||| ||||||||| |||||||| ||||||||  |||||||| || |||||    
T  39655275 aaacaatagtctgccctaatttttcagtgagagaaactctatcttctctctaagttttctttctctttcacttatcgaggaaaggtgattttaggtcaat 39655374  T
Q  440 ttt 442  Q
    |||    
T  39655375 ttt 39655377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 359 - 493
Target Start/End: Complemental strand, 1236999 - 1236865
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| ||||||||||    ||||||||||| ||||| ||| ||||| ||||| ||||||||||| ||| || ||| | ||||||||| ||| |  |    
T  1236999 ttttttagtgagagaaacttcaacttctctctaagttttccttctctttcgctcattgaggaggggtggttttaggtcattctttgacctaaaataatcc 1236900  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaa 493  Q
    ||||||||||||||||||||||| ||| |||||||    
T  1236899 ctctgcatcttttttcccctttcgttcgatctaaa 1236865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 358 - 516
Target Start/End: Complemental strand, 24099567 - 24099411
Alignment:
Q  358 attttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcaca 457  Q
    ||||||||| ||||||||||    ||||||||||  ||||||||| |||||| |||||||| ||||  | |||| | ||| ||||||||||||||||||     
T  24099567 attttttagtgagagaaacttcaacttctctctaggttttctttctctttcaatcatcgagtagggtggctttagg-tca-tttttgacctagaatcacc 24099470  T
Q  458 cctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||| || ||||| ||||||||| || ||||| |||||||| |||||| |||||    
T  24099469 cctctgcattttgtttcctctttctttcgatttaaataagtgatttccacatagatcaa 24099411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 359 - 516
Target Start/End: Complemental strand, 27110770 - 27110612
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||| ||| |||||||||||   |||||||||||| |||||||| | |||| ||||||| || ||||| ||| || ||| ||||||| ||| ||||||||    
T  27110770 ttttctagtgagagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggtggttttaggtcattttttgatctaaaatcacac 27110671  T
Q  459 ctctgcatctttttt-cccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
     ||| |||||||||| | | ||||||||||||||||| |||| | |||||||| |||||    
T  27110670 atctacatcttttttactcttttctttcaatctaaataagtggtcttcacatatatcaa 27110612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 510
Target Start/End: Original strand, 3673252 - 3673379
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttc 481  Q
    |||||||||||| |||||||| | || | ||||||| ||||| || ||| || ||| |||||||||||||||||  ||||| ||||||||  ||| ||||    
T  3673252 cttctctctaaactttctttctcctttattcatcgaagagggttggttttaggtca-tttttgacctagaatcatccctctacatcttttgccccttttc 3673350  T
Q  482 tttcaatctaaattagtgattttcacata 510  Q
    ||||||||||||| |||| || |||||||    
T  3673351 tttcaatctaaataagtggttatcacata 3673379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 499
Target Start/End: Original strand, 10377473 - 10377620
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||| ||| | |||||||||   |||||||||||| |||||||| | |||  |||||||||||||||| ||| || ||| |||||||||||||    
T  10377473 gccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctaga 10377572  T
Q  452 atcacacctctgcatcttttttcccctt-tctttcaatctaaattagtg 499  Q
    | |||   ||| ||||||||| |||||| ||||||||||||||| ||||    
T  10377573 a-caccaatctacatctttttcccccttctctttcaatctaaataagtg 10377620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 494
Target Start/End: Complemental strand, 17693919 - 17693784
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| |||||||||||   |||||||||||| |||||||| | |||  |||| ||||||||||  ||| || || ||||||||||||||||||  |    
T  17693919 ttttttagtgagagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggttgttttaggtc-atttttgacctagaatcatcc 17693821  T
Q  459 ctctgcatcttttttc-ccctttctttcaatctaaat 494  Q
    |||| ||||||||||| |  |||||||||||||||||    
T  17693820 ctctacatcttttttctcaatttctttcaatctaaat 17693784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 510
Target Start/End: Complemental strand, 8443795 - 8443675
Alignment:
Q  390 taaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttt--tttcccctttctttcaa 487  Q
    ||||||||||||| |||||| ||||| || ||||||| ||| || ||| ||||| || ||||||||| | |||||||||||  ||||||||||||||| |    
T  8443795 taaattttctttctctttcattcatcaag-aggggtggttttaggtcattttttaacttagaatcac-catctgcatctttcttttcccctttctttcga 8443698  T
Q  488 tctaaattagtgattttcacata 510  Q
    ||||||| |||||||| ||||||    
T  8443697 tctaaataagtgatttccacata 8443675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 411 - 516
Target Start/End: Original strand, 29937950 - 29938055
Alignment:
Q  411 tcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttc-ccctttctttcaatctaaattagtgattttcacat 509  Q
    |||| ||||| ||||| ||| |||||| |||||||||||||||||| ||||| ||||||||||| || |||||||||| |||||| |||| |||||| ||    
T  29937950 tcattgaggatgggtggttttagatca-tttttgacctagaatcacccctctacatcttttttcgccttttctttcaacctaaataagtggttttcatat 29938048  T
Q  510 acatcaa 516  Q
    | |||||    
T  29938049 atatcaa 29938055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 438 - 516
Target Start/End: Complemental strand, 40619299 - 40619221
Alignment:
Q  438 atttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||||||||  ||||| ||| ||||||| | ||||| ||||||||||| ||||||||||||||| |||||    
T  40619299 atttttgacctagaatcatccctctacatattttttctcttttctatcaatctaaataagtgattttcacatatatcaa 40619221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 509
Target Start/End: Complemental strand, 7883544 - 7883395
Alignment:
Q  361 ttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacct 460  Q
    |||||| ||||||||||    ||||| ||||||||||||||| | |||  ||||||| || | ||| ||| || ||| ||||||| ||| |||||| |||    
T  7883544 ttttagtgagagaaacttcaacttctttctaaattttctttctcattcgttcatcgatgatgagtggttttaggtca-tttttgatctataatcacccct 7883446  T
Q  461 ctgcatcttttttcccc--tttctttcaatctaaattagtgattttcacat 509  Q
    || |||||||||||||   ||||||||||||||||| |||| |||||||||    
T  7883445 ctacatcttttttccctcttttctttcaatctaaataagtggttttcacat 7883395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 502
Target Start/End: Original strand, 8867636 - 8867755
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttct 482  Q
    |||||||||| ||||||||| ||||||  ||||||| | | ||||||| |  ||| ||||||| |||||||||  | ||  ||||||| || ||||||||    
T  8867636 ttctctctaagttttctttctctttcatccatcgagtatgagtgattttaagtcattttttgatctagaatcagccatcaacatctttgtttccctttct 8867735  T
Q  483 ttcaatctaaattagtgatt 502  Q
    |||||||||||| |||||||    
T  8867736 ttcaatctaaataagtgatt 8867755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 504
Target Start/End: Original strand, 8826036 - 8826138
Alignment:
Q  404 ctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatca-cacctctgcatctttttt-cccctttctttcaatctaaattagtgat 501  Q
    ||||||||||||||||| ||||| ||| || ||| ||||||| ||||||||| | ||| || ||||||||| ||||||| |||| |||||||| ||||||    
T  8826036 ctttcactcatcgaggatgggtggttttaggtcattttttgatctagaatcaccccctttgtatcttttttccccctttatttcgatctaaataagtgat 8826135  T
Q  502 ttt 504  Q
    |||    
T  8826136 ttt 8826138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 354 - 508
Target Start/End: Complemental strand, 45446122 - 45445968
Alignment:
Q  354 cctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaat 453  Q
    |||| |||| ||| |||||||||||   |||||||||||| |||||||| | |||  |||||||||| ||||  ||| |  ||| |||||||| ||||||    
T  45446122 cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaagggtagttttatgtcattttttgacatagaat 45446023  T
Q  454 cacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||   |||| ||||||||||||| ||| ||||||| ||| | |||| ||||||||    
T  45446022 catctctctacatcttttttcccttttatttcaatttaattaagtggttttcaca 45445968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 468
Target Start/End: Complemental strand, 7677562 - 7677477
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatct 468  Q
    ||||||||||||||||||||   |||  |||| ||||||||||| ||| || ||| |||||||||||||||||| ||||| |||||    
T  7677562 ttctctctaaattttctttcttcttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatct 7677477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 414 - 506
Target Start/End: Original strand, 28897549 - 28897642
Alignment:
Q  414 tcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcc-cctttctttcaatctaaattagtgattttca 506  Q
    ||||||||||||| ||| |  ||| ||||||| ||| |||||| ||||| |||||||||||| | ||||||||||||||||| |||| ||||||    
T  28897549 tcgaggaggggtggttttaagtcattttttgatctaaaatcacccctctacatcttttttcctcttttctttcaatctaaataagtggttttca 28897642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 516
Target Start/End: Original strand, 3240185 - 3240317
Alignment:
Q  386 tctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttg-acctagaatcacacctctgcatcttttttcccctttc-tt 483  Q
    ||||||| ||||||||| ||| |  || | ||||||||||||||| || ||| |||||  | |||||||||| | ||||||||||||||  | |||| ||    
T  3240185 tctctaagttttctttctcttccggtcgttgaggaggggtgattttaggtcattttttttatctagaatcacccatctgcatcttttttttcatttcctt 3240284  T
Q  484 tcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||| |||||||| |||||| |||||    
T  3240285 tcaatctaaataagtgatttccacatatatcaa 3240317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 439 - 509
Target Start/End: Complemental strand, 40211531 - 40211460
Alignment:
Q  439 tttttgacctagaatcacacctctgcatctttttt-cccctttctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||||||||| ||||| |||||||||| | | ||||||||||||||||| || | |||||||||    
T  40211531 tttttgacctagaatcacccctctacatcttttttactcttttctttcaatctaaataagcggttttcacat 40211460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 494
Target Start/End: Original strand, 39657328 - 39657386
Alignment:
Q  437 aatttttgacctagaatcacacc-tctgcatcttttttcccctttctttcaatctaaat 494  Q
    |||||||||| ||||||||| || ||||||||||||||| ||||| |||||||||||||    
T  39657328 aatttttgacatagaatcaccccctctgcatcttttttctcctttttttcaatctaaat 39657386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 439 - 508
Target Start/End: Original strand, 5046614 - 5046682
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||||| |||||||||| | ||| |||||||||| |||||||||||| ||| ||||| |||||||||||||    
T  5046614 ttttttacctagaatcgcccctatgcatctttt-tcccctttcttttaatttaaataagtgattttcaca 5046682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 516
Target Start/End: Complemental strand, 29617740 - 29617605
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttt--tttcccctt 479  Q
    |||||||||||||||| |||| |||||||| ||||| |||  ||  ||| || ||| ||||||||||| |||||| | ||||||| |||  |||  ||||    
T  29617740 cttctctctaaattttgtttctctttcacttatcgaagagatgttgttttaggtcattttttgacctacaatcacccatctgcatattttctttttcctt 29617641  T
Q  480 tctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||| |||||||| | |||| |||||||| |||||    
T  29617640 tctttc-atctaaataaatgatcttcacatatatcaa 29617605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 510
Target Start/End: Complemental strand, 9619550 - 9619477
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||  |||||| ||||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  9619550 tcaattcttgacctgaaatcacccctcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 9619477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 419 - 510
Target Start/End: Complemental strand, 14907132 - 14907043
Alignment:
Q  419 gaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||| ||||||  |||||||| |||||||  |||||| | ||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  14907132 gagggatgattttggatcaattcttgacctgaaatcacccatcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 14907043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 510
Target Start/End: Complemental strand, 33214913 - 33214786
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt-gacctagaatcacacctctgcatcttttttcccctttc 481  Q
    ||||||||||| |||||||| | |||  |||||||||| ||||| ||| || ||  ||||| ||| ||||||||  | ||| ||||||||| ||| ||||    
T  33214913 ttctctctaaactttctttctccttcgttcatcgaggatgggtggttttaggtcttttttttgacttagaatcattcatctacatcttttt-cccttttc 33214815  T
Q  482 tttcaatctaaattagtgattttcacata 510  Q
    ||||||| ||||| |||||||||| ||||    
T  33214814 tttcaatttaaataagtgattttcgcata 33214786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 456
Target Start/End: Complemental strand, 8412660 - 8412557
Alignment:
Q  354 cctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatca-atttttgacctagaa 452  Q
    |||| |||| ||| ||||||||||||  |||||||||||| |||||||| | |||  |||||||| ||||||| ||| || |||  ||||| ||||||||    
T  8412660 cctagttttctagtgagagaaactctaacttctctctaaactttctttctcattcgttcatcgagtaggggtggttttaggtcattttttttacctagaa 8412561  T
Q  453 tcac 456  Q
    ||||    
T  8412560 tcac 8412557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 516
Target Start/End: Complemental strand, 14545129 - 14545050
Alignment:
Q  439 tttttgacctagaatcacac-ctctgcatcttttttccccttt-ctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||| |||||| | |||| |||||||||| | |||| |||||||||||||| |||| |||||||||| |||||    
T  14545129 tttttgacctaaaatcaccctctctacatctttttttctcttttctttcaatctaaataagtggttttcacatatatcaa 14545050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 14916397 - 14916332
Alignment:
Q  404 ctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttt 470  Q
    |||||| || ||||||||||||| ||| || ||| |||||||||||||||||| | |||||||||||    
T  14916397 ctttcattcttcgaggaggggtggttttaggtca-tttttgacctagaatcacccatctgcatcttt 14916332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 439 - 509
Target Start/End: Complemental strand, 44091971 - 44091903
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||||||||| ||||| |||||||||||   | |||||| ||||||||||||| |||||||||    
T  44091971 tttttgacctagaatcac-cctctacatcttttttcta-tctctttcgatctaaattagtggttttcacat 44091903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 2655761 - 2655834
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||  |||||| | ||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  2655761 tcaattcttgacctgcaatcacccatcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 2655834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 419 - 510
Target Start/End: Complemental strand, 43890333 - 43890244
Alignment:
Q  419 gaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||||| |||  ||||| ||||||||||  |||||| ||||| |||||||||  | ||||  |||||||||||| ||||||||| |||||    
T  43890333 gaggggtggttttggatcattttttgacctgaaatcacccctcttcatcttttt--ctctttaattcaatctaaataagtgattttgacata 43890244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 44577928 - 44578001
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||||||||||||| |||||| ||||| |||||||||  | || | ||||||||||| | |||||||| ||||||    
T  44577928 tcaatttttgacctaaaatcactcctcttcatcttttt--ctctctatttcaatctaactaagtgatttacacata 44578001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 8e-41; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 359 - 516
Target Start/End: Original strand, 14800989 - 14801146
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| || |||||||||||||| ||||||| |||||||   ||||||||||| |||||| |||||||| || | ||||||||| |||||||||| |    
T  14800989 ttttttagtgacagaaactctgtcttttctctaatttttcttcatctttcactcattgaggagaggtgattttaggttaatttttgatctagaatcaccc 14801088  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| || ||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  14801089 ctctgtatattttttcccctttctttcaatctaaataagtaattttcacatacatcaa 14801146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 344 - 516
Target Start/End: Original strand, 545793 - 545963
Alignment:
Q  344 aatagccagccctaatttttt-agggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttt 442  Q
    ||||||| ||||||||||||| ||||||||||||| |||||| | |  || ||||||| | ||||||||||||||||||||||||||| ||  || ||||    
T  545793 aatagccggccctaatttttttagggagagaaactttgtctttttt--aagttttcttcctctttcactcatcgaggaggggtgattttaggcca-tttt 545889  T
Q  443 tgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  545890 tgacctagaatcactcttctacatcttttttcccctttctttcaatctaaataagcaattttcacatacatcaa 545963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 352 - 516
Target Start/End: Original strand, 1523183 - 1523345
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    ||||||||||| ||| ||||||||||||   |||||||||| |||| |||| ||||||| |||  |||||||||||||| || |||||||||||||||||    
T  1523183 gccctaattttatagtgagagaaactctacattctctctaagttttatttctctttcacacatgaaggaggggtgattttaggtcaatttttgacctaga 1523282  T
Q  452 atcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||| ||||||||| ||||||| | ||||||||||||||||| |||||||| ||||||||||||    
T  1523283 atcac-cctctgcat-ttttttctcttttctttcaatctaaataagtgatttccacatacatcaa 1523345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 340 - 516
Target Start/End: Original strand, 14801582 - 14801760
Alignment:
Q  340 aaacaatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaat 439  Q
    ||||||||||| ||||| | ||||||| |||||||| | |||||||||||||| ||||||| | ||||||||||||||| ||||||||||| || |||||    
T  14801582 aaacaatagcctgcccttaatttttagtgagagaaattatgtcttctctctaagttttcttcctctttcactcatcgagaaggggtgattttaggtcaat 14801681  T
Q  440 ttttgacctagaatcacacctctgca---tcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||||| || ||||||||   | ||||||||||||| ||| |||  |||| || ||||||||||||||||||    
T  14801682 ttttgacctagaataacccctctgcattcttttttttccccttt-ttttaattaaaataagggattttcacatacatcaa 14801760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 345 - 509
Target Start/End: Original strand, 12170263 - 12170428
Alignment:
Q  345 atagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttg 444  Q
    |||||| |||||| |||| ||| |||||||||||   |||||||||| | |||||||| | |||  |||||||||||||||| ||| || ||| ||||||    
T  12170263 atagccggccctagttttctagtgagagaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttg 12170362  T
Q  445 acctagaatcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||||||| |||| |||||||||    
T  12170363 acctagaatcacccctctacatcttttttccccttttctttcaatctaaataagtggttttcacat 12170428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 358 - 516
Target Start/End: Original strand, 8102498 - 8102659
Alignment:
Q  358 attttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatc-aatttttgacctagaatcac 456  Q
    ||||||||| |||||||||| | |||||||||||| |||||||   |||| ||  |||||||||||||||||| || |  ||||||||||||||||||||    
T  8102498 attttttagtgagagaaactatttcttctctctaagttttcttcttctttaacatatcgaggaggggtgattttaggtttaatttttgacctagaatcac 8102597  T
Q  457 acctctgcatctttttt--cccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
     ||||||||| ||||||  | ||||||||||||||||||| ||||||||||||| |||||||    
T  8102598 ccctctgcatattttttttctcctttctttcaatctaaataagtgattttcacaaacatcaa 8102659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 419 - 516
Target Start/End: Original strand, 30776508 - 30776605
Alignment:
Q  419 gaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||| || |||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| ||| |||| ||||||||||||    
T  30776508 gaggggtgattttaggtcaatttttgacctagaatcacccctctgcatattttttctcctttctttcaatctaaataagtaatttccacatacatcaa 30776605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 353 - 509
Target Start/End: Complemental strand, 33053482 - 33053325
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    ||||| |||| ||| | |||||||||   |||||||||||| |||||||| | |||  |||||||||||||||| ||| || ||| ||||||||||||||    
T  33053482 ccctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaa 33053383  T
Q  453 tcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    |||  ||||| |||||||||||||| ||||||||||||||||| |||| |||||||||    
T  33053382 tcatccctctacatcttttttccccttttctttcaatctaaataagtggttttcacat 33053325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 386 - 509
Target Start/End: Original strand, 606013 - 606137
Alignment:
Q  386 tctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccc-tttcttt 484  Q
    |||||||| |||||||| | |||  |||||||||||||||||||| |  ||| |||||||||||| ||||| ||||| |||||||||||||| |||||||    
T  606013 tctctaaactttctttctccttcgttcatcgaggaggggtgattttatgtcattttttgacctaggatcacccctctacatcttttttccccttttcttt 606112  T
Q  485 caatctaaattagtgattttcacat 509  Q
    |||||||||| |||| |||||||||    
T  606113 caatctaaataagtggttttcacat 606137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 352 - 509
Target Start/End: Complemental strand, 3913888 - 3913731
Alignment:
Q  352 gccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctaga 451  Q
    |||||| |||| ||| |||||||||||   |||||||||||| |||||||| | ||   ||||||||||||| || ||| || ||| |||||||||||||    
T  3913888 gccctagttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggg-tggttttaggtcattttttgacctaga 3913790  T
Q  452 atcacacctctgcatcttttttcccctt-tctttcaatctaaattagtgattttcacat 509  Q
    ||||| |||| |||||||||||||| || ||||||||||||||| |||| |||||||||    
T  3913789 atcacccctccgcatcttttttcccattctctttcaatctaaataagtggttttcacat 3913731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 413 - 510
Target Start/End: Original strand, 30894472 - 30894570
Alignment:
Q  413 atcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatct-tttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||||||||||| ||| |||||| |||||||||||||||||| ||||| ||||| |||||||| ||||||||||||||||| | || ||||||||||    
T  30894472 atcgaggaggggtggttttagatcattttttgacctagaatcacccctctacatctgtttttcccttttctttcaatctaaataactggttttcacata 30894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 347 - 509
Target Start/End: Complemental strand, 68320 - 68158
Alignment:
Q  347 agccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgac 446  Q
    |||| |||||| ||||||||   |||||||||   |||||||||||| |||||||| | |||  ||||||||||||| || ||| || | ||||||||||    
T  68320 agccggccctagttttttagtaggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggatggttttaggt-aatttttgac 68222  T
Q  447 ctagaatca-cacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||||||| | ||||| ||||||||| ||| ||||||| ||||||||| |||| |||||||||    
T  68221 ctagaatcaccccctctacatctttttccccttttcttttaatctaaataagtggttttcacat 68158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 370 - 509
Target Start/End: Original strand, 23128411 - 23128551
Alignment:
Q  370 gagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatctt 469  Q
    ||||||||||  |||||||||||| |||||||| | |||  |||| |||||||| |  ||| || ||| |||||||||||||||||| ||||| ||||||    
T  23128411 gagaaactctaacttctctctaaactttctttctccttcgttcattgaggagggatagttttaggtcattttttgacctagaatcacccctctacatctt 23128510  T
Q  470 ttttccc-ctttctttcaatctaaattagtgattttcacat 509  Q
    ||| |||  ||||||||| ||||||| |||| |||||||||    
T  23128511 tttccccattttctttcattctaaataagtggttttcacat 23128551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 438 - 516
Target Start/End: Complemental strand, 30608742 - 30608664
Alignment:
Q  438 atttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||||||||||||| ||||| ||| |||||  || |||||||||||||||||||||| |||||||||| |||||    
T  30608742 atttttgacctagaatcacccctctacatatttttctccttttctttcaatctaaattagtggttttcacatatatcaa 30608664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 360 - 509
Target Start/End: Complemental strand, 7515509 - 7515358
Alignment:
Q  360 tttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatca-atttttgacctagaatcacac 458  Q
    ||||||| ||||||| |||   |||||||||||| || ||||| |||||  |||||||||||||||| ||| |||| |  |||||||||||||||||| |    
T  7515509 tttttagagagagaagctccaacttctctctaaacttgctttctctttcgttcatcgaggaggggtggttttagattatttttttgacctagaatcaccc 7515410  T
Q  459 ctctgcatcttttttcccc--tttctttcaatctaaattagtgattttcacat 509  Q
    |||| ||| ||| ||||||  |||||| |||||||||| |||| |||||||||    
T  7515409 ctctacat-tttgttcccctttttcttccaatctaaataagtggttttcacat 7515358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 508
Target Start/End: Complemental strand, 4010807 - 4010660
Alignment:
Q  360 tttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacc 459  Q
    ||||||| ||||||||||   |||||||||||| ||||||||| | || | | || ||||||| |||| || |||||| |||||||||||||||||| ||    
T  4010807 tttttagtgagagaaacttcatcttctctctaagttttctttctcctttatttattgaggaggagtgactttagatcattttttgacctagaatcacccc 4010708  T
Q  460 tctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    ||||  ||||||||  | ||||||||||| ||||| | || ||||||||    
T  4010707 tctgtgtctttttt-tcatttctttcaatttaaataaatggttttcaca 4010660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 516
Target Start/End: Original strand, 30493310 - 30493469
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    ||||| |||||||| |||||||||||   | ||||| ||| ||||||||  ||||||||| |||| ||||| || |||  | ||| ||||||||||||||    
T  30493310 ccctagttttttagtgagagaaactccaacctctctttaagttttctttttctttcactcgtcgaagaggg-tggttttcggtcattttttgacctagaa 30493408  T
Q  453 tcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||| | |  |||||||||||||| |||||||||| |||||| |||||||| |||||| |||||    
T  30493409 tcacccat--gcatcttttttccc-tttctttcaaactaaataagtgatttccacatatatcaa 30493469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 516
Target Start/End: Complemental strand, 32192045 - 32191882
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    ||||| |||||||| ||||||||||||   || | ||||| ||||||||| |||||| ||||| |||||||||| ||| || ||  ||||||| ||| ||    
T  32192045 ccctagttttttagagagagaaactctaattt-tgtctaagttttctttctctttcattcatcaaggaggggtggttttaggtccttttttgatctacaa 32191947  T
Q  453 tcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||| | ||||||||||||| |||| ||| |||| |||||||| ||||||||  ||||| |||||    
T  32191946 tcacccttctgcatctttttcccccttttatttcgatctaaataagtgatttctacatatatcaa 32191882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 405 - 516
Target Start/End: Complemental strand, 1933960 - 1933848
Alignment:
Q  405 tttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcc--cctttctttcaatctaaattagtgatt 502  Q
    |||||||||||||||| | ||||||| |||||| |||||||||||||||||| | ||||||| ||||||    ||||| |||| |||||||| ||| |||    
T  1933960 tttcactcatcgaggatgagtgattttagatcattttttgacctagaatcactcgtctgcatattttttttttccttt-tttcgatctaaataagttatt 1933862  T
Q  503 ttcacatacatcaa 516  Q
    |||||||| |||||    
T  1933861 ttcacatatatcaa 1933848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 491
Target Start/End: Complemental strand, 29320147 - 29320037
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccc-ttt 480  Q
    ||||||| |||| |||||||| | |||  |||||||||| ||||| ||| || |||  |||||| |||||||||| ||||| |||||||||||||| |||    
T  29320147 cttctctttaaactttctttctccttcgttcatcgaggatgggtggttttaggtcatattttgatctagaatcacccctctacatcttttttcccctttt 29320048  T
Q  481 ctttcaatcta 491  Q
    |||||||||||    
T  29320047 ctttcaatcta 29320037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 351 - 456
Target Start/End: Complemental strand, 32328899 - 32328794
Alignment:
Q  351 agccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctag 450  Q
    ||||||| |||| ||| ||||||||||||  |||||||||| | |||||||| | |||  |||||||||||||||| ||| |  ||| |||||||||||     
T  32328899 agccctagttttctagtgagagaaactctaacttctctctatactttctttctccttcgttcatcgaggaggggtggttttaagtcagtttttgacctat 32328800  T
Q  451 aatcac 456  Q
    ||||||    
T  32328799 aatcac 32328794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 34018371 - 34018500
Alignment:
Q  388 tctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttccc-ctttctttca 486  Q
    |||||| |||||||| | |||  |||||||||| ||  | ||| || ||| |||||||||||||||||| ||||| ||||| ||| |||  |||||||||    
T  34018371 tctaaactttctttctccttcgttcatcgaggatggaaggttttaggtcattttttgacctagaatcacccctctacatctctttacccattttctttca 34018470  T
Q  487 atctaaattagtgattttcacatacatcaa 516  Q
    || ||||| |||| |||||||||| |||||    
T  34018471 atttaaataagtggttttcacatatatcaa 34018500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 510
Target Start/End: Complemental strand, 7876253 - 7876164
Alignment:
Q  419 gaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||||| |||  |||||||| |||||||| |||||| | ||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  7876253 gaggggtggttttggatcaattattgacctaaaatcacccatcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 7876164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 474
Target Start/End: Complemental strand, 7976445 - 7976358
Alignment:
Q  386 tctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttc 474  Q
    ||||||| |||||||||  |||||||||||||| | ||||| ||| || ||| |||||||||||||||||| | ||||||| |||||||    
T  7976445 tctctaagttttctttctttttcactcatcgagcatgggtggttttaggtca-tttttgacctagaatcactcatctgcattttttttc 7976358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 350 - 509
Target Start/End: Original strand, 32059682 - 32059840
Alignment:
Q  350 cagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgaccta 449  Q
    ||||| ||||||| ||| |||||||| ||    |||||| ||||  ||||||| |||||| ||||||||||  |||| ||| |  ||| | |||||||||    
T  32059682 cagccataattttctagtgagagaaattccaagttctctttaaacattctttctctttcattcatcgaggataggtggttttaagtcattgtttgaccta 32059781  T
Q  450 gaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    ||||||  | ||| ||||||||| ||| ||||||||||||||||| |||  |||||||||    
T  32059782 gaatcatccttctacatcttttt-cccttttctttcaatctaaataagtagttttcacat 32059840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 438 - 516
Target Start/End: Original strand, 28981039 - 28981116
Alignment:
Q  438 atttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||||||||||| |  | || | |||||||||||| ||||||||||||||||| |||||||| |||||| |||||    
T  28981039 atttttgacctagaattattcttccgtatcttttttccc-tttctttcaatctaaataagtgatttccacatatatcaa 28981116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 8496850 - 8496923
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||  |||||| ||||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  8496850 tcaattcttgacctgaaatcacccctcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 8496923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 510
Target Start/End: Complemental strand, 33740770 - 33740697
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||| |||||| ||||| |||||||||  | || | ||||||||||||| |||||||||||||||    
T  33740770 tcaattcttgacctaaaatcacccctcttcatcttttt--ctctctatttcaatctaaataagtgattttcacata 33740697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 499
Target Start/End: Original strand, 34222658 - 34222717
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtg 499  Q
    ||||| |||||||||||| ||||| |||||||| ||||||||||||| |||||||| ||||    
T  34222658 tttttaacctagaatcacccctctacatctttt-tcccctttctttcgatctaaataagtg 34222717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 12652825 - 12652898
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||  |||||| ||||| |||||||||  | || | ||||||||||||| |||||||||||||||    
T  12652825 tcaattcttgacctgaaatcacccctcttcatcttttt--ctctctatttcaatctaaataagtgattttcacata 12652898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 25064120 - 25064193
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    |||||| |||||||  ||||||  |||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  25064120 tcaattcttgacctgaaatcacctctcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 25064193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 516
Target Start/End: Complemental strand, 26588729 - 26588618
Alignment:
Q  404 ctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattt 503  Q
    ||||||||||||||||| |  ||| || || ||| ||||||| ||| |||||| | ||| ||| |||||| || ||||||| ||||||||| |||| |||    
T  26588729 ctttcactcatcgaggatgattgagtttaggtcagtttttgatctataatcacccatcttcat-tttttttccatttcttttaatctaaataagtggttt 26588631  T
Q  504 tcacatacatcaa 516  Q
     |||||| |||||    
T  26588630 ccacatatatcaa 26588618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 510
Target Start/End: Original strand, 33109719 - 33109792
Alignment:
Q  435 tcaatttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||||||||||||| ||||   | ||| |||||||||  | |||| ||||||||||||| |||||||||||||||    
T  33109719 tcaatttttgacctaaaatcgtccatcttcatcttttt--ctctttatttcaatctaaataagtgattttcacata 33109792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 359 - 516
Target Start/End: Complemental strand, 58387 - 58230
Alignment:
Q  359 ttttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacac 458  Q
    |||||||| |||||||||||   ||||||||||| ||||| ||  ||||||||| ||||||||||||| ||| || ||| ||||||||||| |||||| |    
T  58387 ttttttagtgagagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcaccc 58288  T
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||||||||| ||||| || ||||||||||||||||| |||||||| |||||| |||||    
T  58287 ctctgcatccttttttccttttctttcaatctaaataagtgatttccacatatatcaa 58230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 353 - 516
Target Start/End: Original strand, 1119 - 1282
Alignment:
Q  353 ccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaa 452  Q
    ||||| |||||||| ||| ||||||    ||||||||||||||||||||| | |||  ||||||||||| |||| ||| || ||| ||||||||||||||    
T  1119 ccctagttttttagtgagtgaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaa 1218  T
Q  453 tcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||| ||||| | ||||||||||| ||||||||| ||||||| |||| |||||||||| |||||    
T  1219 tcacccctctacttcttttttcccttttctttcactctaaataagtggttttcacatatatcaa 1282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 346 - 506
Target Start/End: Original strand, 15260 - 15420
Alignment:
Q  346 tagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttga 445  Q
    ||||| |||||| |||| ||| ||||||||||    |||||||||||| |||||||| | |||  || ||||||||||||| ||| || ||| |||||||    
T  15260 tagccggccctagttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcttcgaggaggggtggttttaggtcattttttga 15359  T
Q  446 cctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttca 506  Q
    ||||||||||| ||||| ||||||||| ||| ||||||||||||||||| |||| ||||||    
T  15360 cctagaatcacccctctacatctttttccccttttctttcaatctaaataagtggttttca 15420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 346 - 509
Target Start/End: Original strand, 50554 - 50718
Alignment:
Q  346 tagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttga 445  Q
    ||||| |||||| |||| ||| | |||||||||   ||||| |||||| |||||||| | |||  |||| ||||||||||||||| || ||| |||||||    
T  50554 tagccggccctagttttctagtgggagaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggtgattttaggtcactttttga 50653  T
Q  446 cctagaatcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    ||||||||||  ||||| |||||||||||||| ||||||||||||||||| |||| |||||||||    
T  50654 cctagaatcatccctctacatcttttttccccttttctttcaatctaaataagtggttttcacat 50718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 344 - 509
Target Start/End: Complemental strand, 33071 - 32905
Alignment:
Q  344 aatagccagccctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaattttt 443  Q
    ||||||| |||||| |||| ||| ||||||||||||  |||||||||||| ||||||||   |||  | |||||||||| ||| ||| || ||| |||||    
T  33071 aatagcccgccctagttttctagtgagagaaactctaacttctctctaaactttctttcttcttcgtttatcgaggaggagtggttttaggtcatttttt 32972  T
Q  444 gacctagaatcacacctctgcatcttttttcccc-tttctttcaatctaaattagtgattttcacat 509  Q
    ||| ||||||||| ||||| |||||||| ||||| ||||||||||||||||| |||| |||||||||    
T  32971 gacatagaatcacccctctacatcttttgtccccttttctttcaatctaaataagtggttttcacat 32905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 360 - 516
Target Start/End: Original strand, 7500 - 7654
Alignment:
Q  360 tttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacc 459  Q
    ||||||| ||| ||||||| | ||||||||||| ||||||||| | || | ||||||||||||| || ||| || ||| |||||||||||||||||| |     
T  7500 tttttagtgagggaaactccg-cttctctctaagttttctttctcctttattcatcgaggagggatggttttaggtcattttttgacctagaatcactca 7598  T
Q  460 tctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||||| |||| ||||||||||||||| ||||| |||| |||||||||| |||||    
T  7599 tctgcatc-ttttacccctttctttcaatttaaataagtggttttcacatatatcaa 7654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 382 - 509
Target Start/End: Complemental strand, 72149 - 72021
Alignment:
Q  382 cttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccc-ttt 480  Q
    |||||||||||| |||||||| | |||  |||||||||||||||| ||| || ||| ||||||||||||||||||   ||| ||||||||| |||| |||    
T  72149 cttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccattcttcatctttttccccctttt 72050  T
Q  481 ctttcaatctaaattagtgattttcacat 509  Q
    ||||||||| |||| |||| |||||||||    
T  72049 ctttcaatccaaataagtggttttcacat 72021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 360 - 499
Target Start/End: Complemental strand, 2279 - 2138
Alignment:
Q  360 tttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacc 459  Q
    ||||||| |||||||||||   |||||||||||| ||| |||| | |||  |||||||||||| ||| ||| |  ||| ||||||| |||||||||| ||    
T  2279 tttttagagagagaaactccaacttctctctaaactttttttctccttcgttcatcgaggaggagtggttttaagtcattttttgatctagaatcacccc 2180  T
Q  460 tctgcatcttttttcccc--tttctttcaatctaaattagtg 499  Q
    ||| ||||||||||||||  ||||||||||||||||| ||||    
T  2179 tctacatcttttttcccctttttctttcaatctaaataagtg 2138  T

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Target: scaffold0064 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 354 - 466
Target Start/End: Complemental strand, 19348 - 19238
Alignment:
Q  354 cctaattttttagggagagaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaat 453  Q
    ||||||||||||| |||||||||||   ||||||||||| ||||||||| ||||||||||||||||||||||| ||| |  ||  |||||||||||||||    
T  19348 cctaattttttagtgagagaaactccaacttctctctaa-ttttctttctctttcactcatcgaggaggggtggttttatgtc-gtttttgacctagaat 19251  T
Q  454 cacacctctgcat 466  Q
     || |||||||||    
T  19250 tacccctctgcat 19238  T

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Target: scaffold0492 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 383 - 516
Target Start/End: Original strand, 12721 - 12854
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttcccctttct 482  Q
    |||||||| || |||||||| |||| | ||||| ||||| |||| ||| || ||| ||||||||||||||||||  || | ||| |||||  || |||||    
T  12721 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcaccgctatacatatttttctccttttct 12820  T
Q  483 ttcaatctaaattagtgattttcacatacatcaa 516  Q
     ||||| ||||| |||| ||||||||||||||||    
T  12821 atcaatttaaataagtggttttcacatacatcaa 12854  T

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Target: scaffold0039 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 503
Target Start/End: Original strand, 92926 - 93025
Alignment:
Q  404 ctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctc-tgcatcttttttcccctttctttcaatctaaattagtgatt 502  Q
    |||||| ||||  |||||||||| ||| || | | |||||||||||||||||  |||| ||||||||||||| ||||||||||||||||||| |||||||    
T  92926 ctttcattcatataggaggggtggttttaggttattttttgacctagaatcat-cctcgtgcatcttttttctcctttctttcaatctaaataagtgatt 93024  T

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Target: scaffold0136 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 464 - 510
Target Start/End: Original strand, 37933 - 37979
Alignment:
Q  464 catcttttttcccctttctttcaatctaaattagtgattttcacata 510  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||    
T  37933 catcttttttcccctttctttcaatctaaataagtggttttcacata 37979  T

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Target: scaffold0136; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 438 - 516
Target Start/End: Complemental strand, 10269 - 10191
Alignment:
Q  438 atttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    |||||| |||||||||||| | ||| ||| |||||| |  |||||||| |||||||| |||| |||||||||| |||||    
T  10269 atttttcacctagaatcactcatctacatatttttttcgttttctttccatctaaataagtggttttcacatatatcaa 10191  T

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Target: scaffold0347 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 459 - 508
Target Start/End: Original strand, 5894 - 5943
Alignment:
Q  459 ctctgcatcttttttcccctttctttcaatctaaattagtgattttcaca 508  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| ||||    
T  5894 ctctgcatcttttttctcctttctttcaatctaaataagtgatttccaca 5943  T

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Target: scaffold0219 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 494
Target Start/End: Complemental strand, 15122 - 15010
Alignment:
Q  383 ttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttttttccc-ctttc 481  Q
    ||||||||||| |||||||| | |||| |||||||||| | |||   | || | | ||||||||||||||||||  |||| |||||||||||||  ||||    
T  15122 ttctctctaaactttctttctccttcattcatcgaggatgtgtggggttaggttattttttgacctagaatcaccactctacatcttttttccctttttc 15023  T
Q  482 tttcaatctaaat 494  Q
    |||||||||||||    
T  15022 tttcaatctaaat 15010  T

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Target: scaffold0618 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 439 - 509
Target Start/End: Original strand, 7939 - 8007
Alignment:
Q  439 tttttgacctagaatcacacctctgcatcttttttcccctttctttcaatctaaattagtgattttcacat 509  Q
    |||||||||||||||||| ||||| |||||||||||   | |||||| ||||||||||||| |||||||||    
T  7939 tttttgacctagaatcac-cctctacatcttttttcta-tctctttcgatctaaattagtggttttcacat 8007  T

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Target: scaffold0554 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 516
Target Start/End: Original strand, 10672 - 10815
Alignment:
Q  371 agaaactctgtcttctctctaaattttctttccctttcactcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatcttt 470  Q
    |||||||||  |||||||||||| || ||| | | |||| ||||||||||| |||| ||| || |||  |||||||||| | |||| |||||  ||||||    
T  10672 agaaactctaacttctctctaaacttgcttcctccttcattcatcgaggagaggtggttttaggtca--ttttgacctaaagtcacccctctagatcttt 10769  T
Q  471 tttcccctttctttcaatctaaattagtgattttcacatacatcaa 516  Q
    ||  |  ||||||| ||| ||||| |||| |||||||||| |||||    
T  10770 ttcgctttttctttgaatgtaaataagtggttttcacatatatcaa 10815  T

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Target: scaffold0087 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 471
Target Start/End: Complemental strand, 25585 - 25525
Alignment:
Q  411 tcatcgaggaggggtgatttaagatcaatttttgacctagaatcacacctctgcatctttt 471  Q
    |||||||||||||||| ||| |  ||| ||||||||||| |||||| ||||| ||||||||    
T  25585 tcatcgaggaggggtggttttatgtcattttttgacctataatcacccctctacatctttt 25525  T

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