View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11530_low_36 (Length: 286)
Name: NF11530_low_36
Description: NF11530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11530_low_36 |
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Alignment Details
Target: chr1 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 8 - 267
Target Start/End: Original strand, 28376875 - 28377134
Alignment:
| Q |
8 |
aggaggagcagagaaattaactaagttgttttttccattacaaagttttggtattcaacaaggaaacaattaatactcacatcatcaatcaatggcaaaa |
107 |
Q |
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| T |
28376875 |
aggaggaggagagaaattaactaagttgttttttccataacaaagttttggtattcaacaaggaaacaattaatactcacatcatcaatcaatggcaaaa |
28376974 |
T |
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| Q |
108 |
ggaatgaggaatctaagttgttggatggaggttgctcctgcacccataattttcccaacaaggccttctaattctcctactttggagacaattaaagaag |
207 |
Q |
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| T |
28376975 |
ggaatgaggaatctaagttgttggatggaggttgctcctgcacccataattttcccaacaaggccttctaattctcctactttggagacaattaaagaag |
28377074 |
T |
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| Q |
208 |
ttgctgaggaatatgatgatattcaaattaagcataaataattaatctcgtggagtaaca |
267 |
Q |
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| T |
28377075 |
ttgctgaggaatatgatgatattcaaattaagcataaataattaatctcgtggagtaaca |
28377134 |
T |
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