View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11530_low_50 (Length: 214)
Name: NF11530_low_50
Description: NF11530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11530_low_50 |
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Alignment Details
Target: chr3 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 16 - 197
Target Start/End: Original strand, 44618095 - 44618276
Alignment:
| Q |
16 |
gaaggaagaacgtgtcttcagttcaagaaatacctgtaattataaagttttctagatcatatgatgtggcctgatgttttaaagtttcaggtactattgt |
115 |
Q |
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| T |
44618095 |
gaaggaagaacgtgtcttcagttcaagaaatacctgtaattataaagttttctagatcatatgatgtggcctgatgttttaaagtttcaggtactattgt |
44618194 |
T |
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| Q |
116 |
gataaatgatatatgtattctccctaatgtaatagttttggtaaataaagtgaattcatgatacattcaaactgtcaacttg |
197 |
Q |
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| T |
44618195 |
gataaatgatatatgtattctccctaatgtaatagttttggtaaataaagtgaattcatgatacattcaaactgtcaacttg |
44618276 |
T |
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