View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11531_low_7 (Length: 431)

Name: NF11531_low_7
Description: NF11531
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11531_low_7
NF11531_low_7
[»] chr3 (69 HSPs)
chr3 (241-419)||(44805146-44805323)
chr3 (18-171)||(44805380-44805532)
chr3 (245-414)||(35175526-35175699)
chr3 (242-409)||(628713-628884)
chr3 (322-416)||(51923847-51923942)
chr3 (323-416)||(51303517-51303611)
chr3 (323-403)||(42460882-42460963)
chr3 (260-416)||(50194143-50194303)
chr3 (242-409)||(53807648-53807819)
chr3 (302-409)||(8914839-8914949)
chr3 (327-416)||(7546735-7546825)
chr3 (245-416)||(9998587-9998763)
chr3 (323-416)||(16235546-16235640)
chr3 (302-416)||(21533660-21533777)
chr3 (302-416)||(45568296-45568413)
chr3 (323-403)||(29922190-29922271)
chr3 (323-403)||(29971343-29971424)
chr3 (242-391)||(10108381-10108535)
chr3 (242-391)||(10233215-10233369)
chr3 (323-416)||(21289688-21289782)
chr3 (302-408)||(27856293-27856402)
chr3 (18-96)||(44800980-44801058)
chr3 (242-416)||(9797323-9797502)
chr3 (242-416)||(52922906-52923085)
chr3 (260-415)||(4821928-4822086)
chr3 (242-391)||(10229621-10229775)
chr3 (340-416)||(27706118-27706194)
chr3 (24-95)||(44797587-44797658)
chr3 (323-408)||(38859986-38860072)
chr3 (245-416)||(40556822-40556998)
chr3 (323-416)||(43488464-43488558)
chr3 (302-416)||(54149111-54149228)
chr3 (347-416)||(7792086-7792155)
chr3 (340-416)||(14859610-14859686)
chr3 (245-416)||(46304313-46304488)
chr3 (247-409)||(12946762-12946928)
chr3 (303-402)||(33580014-33580116)
chr3 (323-401)||(46220798-46220877)
chr3 (327-416)||(4711602-4711692)
chr3 (302-416)||(6954547-6954664)
chr3 (325-402)||(21313170-21313248)
chr3 (302-416)||(21431733-21431850)
chr3 (347-401)||(26275718-26275772)
chr3 (339-416)||(19339296-19339372)
chr3 (347-412)||(26739256-26739321)
chr3 (323-391)||(48650608-48650677)
chr3 (361-414)||(51487217-51487270)
chr3 (325-396)||(20987631-20987703)
chr3 (342-414)||(44959867-44959939)
chr3 (347-402)||(19619847-19619902)
chr3 (347-409)||(38142652-38142714)
chr3 (323-416)||(40487445-40487539)
chr3 (325-410)||(41818341-41818427)
chr3 (302-416)||(47041899-47042016)
chr3 (362-400)||(53508362-53508400)
chr3 (328-396)||(23799789-23799858)
chr3 (326-413)||(12149661-12149749)
chr3 (364-408)||(32246551-32246595)
chr3 (340-411)||(3085193-3085264)
chr3 (303-402)||(38545933-38546035)
chr3 (323-396)||(12050522-12050596)
chr3 (323-416)||(20464844-20464938)
chr3 (355-408)||(9173876-9173929)
chr3 (347-408)||(52497124-52497184)
chr3 (304-416)||(7448767-7448882)
chr3 (304-416)||(7456909-7457024)
chr3 (352-400)||(26716011-26716059)
chr3 (323-402)||(37040903-37040982)
chr3 (327-414)||(52115899-52115987)
[»] chr6 (36 HSPs)
chr6 (245-416)||(31296942-31297117)
chr6 (242-416)||(30493654-30493833)
chr6 (242-416)||(3913363-3913542)
chr6 (254-416)||(7975989-7976155)
chr6 (302-416)||(30776785-30776902)
chr6 (245-413)||(28981302-28981474)
chr6 (322-416)||(9380145-9380240)
chr6 (323-416)||(546153-546247)
chr6 (302-391)||(9341502-9341594)
chr6 (340-416)||(1523530-1523606)
chr6 (304-414)||(606328-606441)
chr6 (323-396)||(20225993-20226067)
chr6 (323-396)||(22119977-22120051)
chr6 (323-416)||(23128740-23128834)
chr6 (245-414)||(34185486-34185659)
chr6 (243-416)||(33052958-33053136)
chr6 (323-409)||(14801956-14802043)
chr6 (242-416)||(32327009-32327185)
chr6 (303-401)||(528204-528303)
chr6 (322-416)||(12170590-12170685)
chr6 (303-416)||(127791-127905)
chr6 (302-400)||(8102864-8102965)
chr6 (244-391)||(14174862-14175014)
chr6 (244-391)||(14179398-14179550)
chr6 (302-391)||(67852-67944)
chr6 (347-416)||(32191629-32191698)
chr6 (344-402)||(13546597-13546655)
chr6 (346-416)||(31852091-31852161)
chr6 (326-414)||(29255323-29255412)
chr6 (356-409)||(29743126-29743179)
chr6 (342-414)||(30608409-30608481)
chr6 (302-384)||(21426537-21426622)
chr6 (302-416)||(26588323-26588440)
chr6 (304-414)||(27097495-27097608)
chr6 (322-402)||(32802682-32802763)
chr6 (364-416)||(14846137-14846189)
[»] chr8 (46 HSPs)
chr8 (323-410)||(18890571-18890659)
chr8 (269-408)||(7198010-7198153)
chr8 (242-409)||(15344438-15344611)
chr8 (242-409)||(15433503-15433676)
chr8 (242-409)||(15524807-15524980)
chr8 (323-416)||(41896640-41896734)
chr8 (323-416)||(42046344-42046438)
chr8 (242-409)||(1236485-1236656)
chr8 (302-416)||(7883090-7883207)
chr8 (302-412)||(16928606-16928719)
chr8 (323-416)||(23230766-23230860)
chr8 (242-400)||(21237929-21238089)
chr8 (302-408)||(8867936-8868048)
chr8 (323-416)||(14585800-14585894)
chr8 (302-416)||(33347370-33347487)
chr8 (327-416)||(43833872-43833962)
chr8 (343-416)||(39657577-39657650)
chr8 (242-408)||(24099044-24099208)
chr8 (304-416)||(45445662-45445777)
chr8 (322-416)||(27110336-27110431)
chr8 (323-396)||(41060135-41060209)
chr8 (302-416)||(471013-471132)
chr8 (347-408)||(29617171-29617232)
chr8 (302-391)||(31013457-31013549)
chr8 (350-414)||(18846366-18846430)
chr8 (347-397)||(28086709-28086759)
chr8 (323-396)||(28897852-28897926)
chr8 (340-409)||(1239287-1239356)
chr8 (325-401)||(5046891-5046968)
chr8 (347-400)||(14916085-14916138)
chr8 (362-415)||(26469058-26469111)
chr8 (323-402)||(37971420-37971500)
chr8 (242-387)||(3673593-3673743)
chr8 (345-416)||(5333552-5333623)
chr8 (323-416)||(10377812-10377906)
chr8 (302-396)||(25190914-25191011)
chr8 (302-396)||(30568170-30568267)
chr8 (303-396)||(9637259-9637355)
chr8 (347-416)||(20553138-20553207)
chr8 (325-393)||(40211176-40211245)
chr8 (366-410)||(8443427-8443471)
chr8 (305-416)||(16247077-16247189)
chr8 (365-416)||(41684505-41684556)
chr8 (347-416)||(20559641-20559710)
chr8 (347-416)||(20571203-20571272)
chr8 (347-416)||(24186558-24186627)
[»] chr1 (51 HSPs)
chr1 (242-416)||(47133027-47133205)
chr1 (260-409)||(19061040-19061193)
chr1 (242-408)||(24583278-24583448)
chr1 (322-416)||(48750309-48750404)
chr1 (244-416)||(12635294-12635470)
chr1 (322-416)||(5983960-5984055)
chr1 (247-408)||(24583082-24583247)
chr1 (323-408)||(34529206-34529292)
chr1 (302-416)||(45415682-45415799)
chr1 (304-416)||(31317860-31317975)
chr1 (322-416)||(14872763-14872858)
chr1 (323-416)||(34412966-34413060)
chr1 (242-401)||(44543411-44543573)
chr1 (305-416)||(16161952-16162066)
chr1 (271-409)||(49627044-49627186)
chr1 (347-417)||(15492410-15492480)
chr1 (323-416)||(32679015-32679109)
chr1 (323-416)||(35484265-35484359)
chr1 (338-411)||(14489401-14489474)
chr1 (302-414)||(11462333-11462448)
chr1 (323-402)||(36775584-36775664)
chr1 (302-401)||(34878129-34878231)
chr1 (365-416)||(37720066-37720117)
chr1 (322-396)||(44915783-44915858)
chr1 (347-417)||(9341849-9341919)
chr1 (302-416)||(10776312-10776429)
chr1 (302-396)||(21687522-21687619)
chr1 (323-416)||(31984285-31984379)
chr1 (323-391)||(21947492-21947561)
chr1 (322-416)||(40163313-40163407)
chr1 (323-402)||(7836670-7836750)
chr1 (327-402)||(51373736-51373812)
chr1 (323-401)||(13144686-13144765)
chr1 (242-416)||(32395122-32395300)
chr1 (323-393)||(32873738-32873809)
chr1 (323-416)||(7337537-7337631)
chr1 (323-416)||(27580002-27580096)
chr1 (242-402)||(50377461-50377626)
chr1 (324-400)||(3228409-3228486)
chr1 (340-396)||(45789685-45789741)
chr1 (342-401)||(6217717-6217776)
chr1 (327-401)||(16989510-16989585)
chr1 (326-392)||(49648752-49648819)
chr1 (323-395)||(15431540-15431613)
chr1 (324-408)||(25564130-25564215)
chr1 (342-391)||(31919138-31919187)
chr1 (360-409)||(41994558-41994607)
chr1 (366-414)||(13075573-13075621)
chr1 (304-376)||(27456648-27456723)
chr1 (364-416)||(43412498-43412550)
chr1 (348-392)||(45393285-45393329)
[»] chr2 (49 HSPs)
chr2 (242-402)||(37994429-37994593)
chr2 (323-416)||(10237091-10237185)
chr2 (241-416)||(7646609-7646789)
chr2 (242-416)||(37876396-37876575)
chr2 (247-409)||(17248943-17249109)
chr2 (327-416)||(1421807-1421897)
chr2 (242-416)||(4778884-4779063)
chr2 (242-416)||(10929796-10929974)
chr2 (245-409)||(24461581-24461746)
chr2 (340-409)||(6358774-6358843)
chr2 (242-402)||(18763613-18763778)
chr2 (323-416)||(3309076-3309170)
chr2 (302-416)||(7677725-7677842)
chr2 (304-402)||(28533808-28533909)
chr2 (342-408)||(29574523-29574589)
chr2 (325-416)||(4904022-4904114)
chr2 (323-414)||(14955662-14955754)
chr2 (323-414)||(25508943-25509035)
chr2 (305-396)||(12554036-12554130)
chr2 (242-402)||(33923850-33924015)
chr2 (323-416)||(16376070-16376164)
chr2 (364-421)||(31210524-31210581)
chr2 (243-401)||(31788602-31788765)
chr2 (322-402)||(33585609-33585690)
chr2 (302-391)||(4100492-4100583)
chr2 (340-416)||(23933512-23933588)
chr2 (303-391)||(27097260-27097351)
chr2 (302-378)||(35220497-35220576)
chr2 (322-388)||(41327898-41327965)
chr2 (242-401)||(5427659-5427823)
chr2 (323-412)||(38445301-38445391)
chr2 (340-409)||(21612376-21612444)
chr2 (326-402)||(36692019-36692096)
chr2 (302-378)||(19062199-19062278)
chr2 (302-402)||(29279422-29279525)
chr2 (326-416)||(9169136-9169227)
chr2 (355-402)||(17994638-17994685)
chr2 (322-396)||(18107624-18107699)
chr2 (355-416)||(14416292-14416353)
chr2 (364-401)||(30399946-30399983)
chr2 (326-409)||(32448494-32448581)
chr2 (355-416)||(37416841-37416902)
chr2 (362-403)||(41694765-41694806)
chr2 (302-402)||(1415702-1415805)
chr2 (354-390)||(4264629-4264665)
chr2 (344-392)||(18695209-18695257)
chr2 (312-396)||(19028776-19028863)
chr2 (348-400)||(19595804-19595856)
chr2 (302-414)||(36942974-36943088)
[»] chr7 (35 HSPs)
chr7 (302-416)||(48316663-48316780)
chr7 (302-416)||(12141158-12141276)
chr7 (322-416)||(9450010-9450105)
chr7 (323-410)||(48930836-48930924)
chr7 (326-416)||(35665012-35665103)
chr7 (323-416)||(35133070-35133164)
chr7 (302-416)||(40993280-40993397)
chr7 (247-402)||(45349593-45349753)
chr7 (303-416)||(48061545-48061661)
chr7 (340-416)||(22743067-22743143)
chr7 (302-416)||(39171441-39171558)
chr7 (242-408)||(41553225-41553394)
chr7 (347-416)||(24069293-24069362)
chr7 (322-398)||(46822616-46822692)
chr7 (302-402)||(8001397-8001500)
chr7 (302-413)||(42978736-42978850)
chr7 (323-416)||(13796803-13796897)
chr7 (306-416)||(19296993-19297106)
chr7 (302-416)||(34899458-34899575)
chr7 (302-402)||(37837309-37837412)
chr7 (242-414)||(28044545-28044722)
chr7 (347-416)||(25068185-25068255)
chr7 (364-402)||(28476363-28476401)
chr7 (304-402)||(38798918-38799019)
chr7 (355-392)||(46244159-46244196)
chr7 (242-391)||(28407707-28407861)
chr7 (342-409)||(9977104-9977171)
chr7 (323-392)||(23085673-23085744)
chr7 (323-416)||(25255350-25255444)
chr7 (327-416)||(46700158-46700248)
chr7 (327-396)||(47590454-47590524)
chr7 (380-409)||(3224343-3224372)
chr7 (347-416)||(25287085-25287154)
chr7 (302-396)||(29617551-29617647)
chr7 (365-401)||(3398328-3398364)
[»] chr4 (51 HSPs)
chr4 (302-416)||(2520920-2521037)
chr4 (242-409)||(47320202-47320373)
chr4 (303-414)||(36194851-36194965)
chr4 (242-408)||(36204169-36204339)
chr4 (302-408)||(6155071-6155183)
chr4 (247-416)||(43510337-43510511)
chr4 (302-401)||(29960800-29960902)
chr4 (322-416)||(51888084-51888179)
chr4 (323-416)||(31891161-31891255)
chr4 (327-408)||(37465631-37465713)
chr4 (302-416)||(56040497-56040614)
chr4 (242-416)||(21686031-21686210)
chr4 (247-403)||(28857555-28857715)
chr4 (342-416)||(52944452-52944526)
chr4 (304-401)||(9714066-9714166)
chr4 (312-416)||(9145752-9145859)
chr4 (323-402)||(45418667-45418749)
chr4 (365-416)||(2069497-2069548)
chr4 (304-391)||(9178519-9178609)
chr4 (327-416)||(18935923-18936013)
chr4 (302-416)||(22611324-22611441)
chr4 (302-396)||(35348468-35348565)
chr4 (323-396)||(43095789-43095863)
chr4 (323-408)||(52933823-52933909)
chr4 (242-416)||(19853301-19853480)
chr4 (347-396)||(29120278-29120327)
chr4 (326-414)||(32766657-32766746)
chr4 (326-414)||(36161854-36161943)
chr4 (362-414)||(9048807-9048859)
chr4 (322-416)||(33921195-33921290)
chr4 (343-390)||(52060818-52060865)
chr4 (323-416)||(10496476-10496570)
chr4 (347-409)||(22305520-22305582)
chr4 (323-416)||(27652085-27652178)
chr4 (323-416)||(43853584-43853678)
chr4 (342-416)||(52978885-52978959)
chr4 (302-416)||(53811169-53811285)
chr4 (355-416)||(48351093-48351154)
chr4 (323-413)||(17949198-17949289)
chr4 (323-413)||(17953050-17953141)
chr4 (323-414)||(24098943-24099033)
chr4 (304-391)||(48257485-48257575)
chr4 (302-416)||(21662578-21662695)
chr4 (302-416)||(21671342-21671459)
chr4 (342-408)||(36184680-36184746)
chr4 (323-400)||(44596817-44596895)
chr4 (355-401)||(55228134-55228180)
chr4 (366-411)||(1621427-1621472)
chr4 (364-413)||(33332485-33332534)
chr4 (364-408)||(10258812-10258856)
chr4 (302-402)||(53444273-53444376)
[»] scaffold0888 (1 HSPs)
scaffold0888 (323-414)||(1552-1644)
[»] chr5 (32 HSPs)
chr5 (242-397)||(10332337-10332496)
chr5 (242-416)||(13007349-13007528)
chr5 (242-409)||(8088002-8088173)
chr5 (323-416)||(14211347-14211441)
chr5 (323-416)||(26877983-26878076)
chr5 (323-416)||(28540780-28540874)
chr5 (302-416)||(34945513-34945630)
chr5 (302-416)||(38597917-38598034)
chr5 (242-391)||(26825575-26825729)
chr5 (323-401)||(8096372-8096451)
chr5 (323-416)||(2979180-2979274)
chr5 (323-396)||(11867789-11867863)
chr5 (245-401)||(24229576-24229737)
chr5 (347-401)||(35920895-35920949)
chr5 (325-414)||(39567392-39567482)
chr5 (242-402)||(38007492-38007656)
chr5 (302-396)||(14082247-14082344)
chr5 (241-416)||(14726249-14726429)
chr5 (302-416)||(25980278-25980394)
chr5 (242-391)||(9113514-9113668)
chr5 (326-401)||(41630637-41630713)
chr5 (323-416)||(6217018-6217113)
chr5 (365-416)||(10722881-10722932)
chr5 (327-396)||(7036359-7036428)
chr5 (347-396)||(7930317-7930366)
chr5 (242-299)||(8984778-8984835)
chr5 (347-402)||(31078318-31078373)
chr5 (323-416)||(19103341-19103435)
chr5 (242-416)||(6011927-6012106)
chr5 (323-378)||(8984859-8984915)
chr5 (356-392)||(19100527-19100563)
chr5 (323-402)||(19121046-19121126)
[»] scaffold0042 (1 HSPs)
scaffold0042 (269-416)||(92313-92464)
[»] scaffold0009 (1 HSPs)
scaffold0009 (245-416)||(57881-58056)
[»] scaffold0017 (1 HSPs)
scaffold0017 (302-416)||(32598-32715)
[»] scaffold0039 (1 HSPs)
scaffold0039 (340-413)||(93231-93304)
[»] scaffold0088 (1 HSPs)
scaffold0088 (323-416)||(50897-50991)
[»] scaffold0064 (1 HSPs)
scaffold0064 (342-402)||(18976-19036)
[»] scaffold0049 (1 HSPs)
scaffold0049 (340-416)||(71192-71268)
[»] scaffold0127 (1 HSPs)
scaffold0127 (323-416)||(15613-15707)
[»] scaffold0050 (1 HSPs)
scaffold0050 (323-416)||(65916-66010)
[»] scaffold0347 (1 HSPs)
scaffold0347 (363-416)||(6151-6204)
[»] scaffold0021 (1 HSPs)
scaffold0021 (348-409)||(4300-4361)
[»] scaffold0884 (1 HSPs)
scaffold0884 (302-402)||(1824-1927)
[»] scaffold0445 (1 HSPs)
scaffold0445 (302-402)||(1479-1582)
[»] scaffold0121 (1 HSPs)
scaffold0121 (325-416)||(31150-31242)
[»] scaffold0026 (1 HSPs)
scaffold0026 (325-391)||(71746-71813)
[»] scaffold0634 (1 HSPs)
scaffold0634 (326-413)||(8636-8724)
[»] scaffold0128 (1 HSPs)
scaffold0128 (364-416)||(36946-36998)
[»] scaffold0136 (2 HSPs)
scaffold0136 (364-414)||(38179-38229)
scaffold0136 (302-391)||(9893-9985)
[»] scaffold0015 (1 HSPs)
scaffold0015 (364-410)||(3957-4003)
[»] scaffold0603 (1 HSPs)
scaffold0603 (322-390)||(7862-7931)
[»] scaffold0219 (1 HSPs)
scaffold0219 (323-390)||(14745-14813)


Alignment Details
Target: chr3 (Bit Score: 163; Significance: 6e-87; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 241 - 419
Target Start/End: Complemental strand, 44805323 - 44805146
Alignment:
Q  241 gttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaactagctaaaaacttaaaaggtgaatgcgaacaaactcacata 340  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44805323 gttgacaaaaa-aaaacgttattcaataattcaaatggatataatacatcaaaatcaactagctaaaaacttaaaaggtgaatgcgaacaaactcacata 44805225  T
Q  341 cccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgctctc 419  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44805224 cccaagttaatagcatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgctctc 44805146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 44805532 - 44805380
Alignment:
Q  18 aatgtctcatgcttggacgctgcttatctccatgttagtgtatttcaaagctcaatcactcttgtattatcgctaatcatgaaattttcaattaatttat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  44805532 aatgtctcatgcttggacgctgcttatctccatgttagtgtatttcaaagcttaatcactcttgtattatcgctaatcatgaaattttcaattaatttat 44805433  T
Q  118 attattctcctatttaacatagagaagatgcactccctctttcccaaattcaaa 171  Q
    ||||||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  44805432 attattctcctattt-acatacagaagatgcactccctcttttccaaattcaaa 44805380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 245 - 414
Target Start/End: Complemental strand, 35175699 - 35175526
Alignment:
Q  245 acaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcacat-a 340  Q
    ||||||| |||||| |||||| | |||||||| |||| ||||||||| ||||||| | ||||||||| |||||| |||||  |||||||||||||||  |    
T  35175699 acaaaaataaaacgatattcattcattcaaattgatagaatacatcataatcaacatcgctaaaaacgtaaaagatgaatctgcgaacaaactcacaaca 35175600  T
Q  341 cccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    | ||| ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||| || ||||| ||||    
T  35175599 ctcaagttaatagcatacaatgacaaaatgcctacaaacaatatgatgaaatataaatcatcagaatactcatg 35175526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 242 - 409
Target Start/End: Original strand, 628713 - 628884
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcaca 338  Q
    |||||||||| |||| | |||||| | |||||||| |||| ||||||||||||||||  | ||||||||| |||| | |||||  |||||||||||||||    
T  628713 ttgacaaaaacaaaatgatattcattcattcaaattgatagaatacatcaaaatcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 628812  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
      |||||| ||||||| |||||| | ||||||||||||||| ||||||||| |||||||||||||| |||||    
T  628813 acacccaagttaatagaatacaacggcaaaatgcctacaaataatatgatataatctaaatcaccagaatac 628884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 322 - 416
Target Start/End: Complemental strand, 51923942 - 51923847
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  51923942 atgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgct 51923847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 51303517 - 51303611
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  51303517 tgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgct 51303611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 323 - 403
Target Start/End: Complemental strand, 42460963 - 42460882
Alignment:
Q  323 tgcgaacaaactcaca-tacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacca 403  Q
    |||||||||||||||| ||||||| ||||||| ||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  42460963 tgcgaacaaactcacagtacccaagttaatagcatacaacaacaaaatgcctacaaataatatgataaaatctaaatcacca 42460882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 260 - 416
Target Start/End: Original strand, 50194143 - 50194303
Alignment:
Q  260 tattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagta 355  Q
    |||||| | |||||||| |||||||||||||| ||||||| | ||||||||| |||| | |||||  |||||||||||||||  | |||| ||||||| |    
T  50194143 tattcattcattcaaattgatataatacatcagaatcaacatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagttaatagca 50194242  T
Q  356 tacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    || || | ||||||||||||||| |||||||| | ||||||||||||| ||||| ||||||    
T  50194243 tataacggcaaaatgcctacaaaaaatatgatgatatctaaatcaccagaatactcatgct 50194303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 242 - 409
Target Start/End: Original strand, 53807648 - 53807819
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcaca 338  Q
    |||||||||| |||| | |||||| | ||| ||||  ||| ||||||||| ||||||  | ||||||||| |||| | |||||  |||||||||||||||    
T  53807648 ttgacaaaaacaaaatgatattcattcattaaaatcaatagaatacatcagaatcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 53807747  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
      |||||| ||||||| |||||| | ||||||||||||||| ||||||||| |||||||||||||| |||||    
T  53807748 ccacccaagttaatagcatacaacggcaaaatgcctacaaataatatgatataatctaaatcaccagaatac 53807819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 409
Target Start/End: Complemental strand, 8914949 - 8914839
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| || |||||||||  |||||||||||||||| || ||| ||||||| |||||| | ||||||||||||||| |||||||| ||||||||||    
T  8914949 gctaaaaacgtataaggtgaatctgcgaacaaactcacatcactcaagttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaat 8914850  T
Q  399 caccataatac 409  Q
    ||||| |||||    
T  8914849 caccagaatac 8914839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 327 - 416
Target Start/End: Complemental strand, 7546825 - 7546735
Alignment:
Q  327 aacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  7546825 aacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgct 7546735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 245 - 416
Target Start/End: Complemental strand, 9998763 - 9998587
Alignment:
Q  245 acaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac--tagctaaaaacttaaaaggtgaatg--cgaacaaactcacat- 339  Q
    ||||||| |||||| |||||| | |||||||| |||| | |||||||||  |||   ||||||||||| |||| |||||||   ||||||||||||||      
T  9998763 acaaaaataaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacatagctaaaaacgtaaagggtgaatctacgaacaaactcacagc 9998664  T
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||| ||||||| |||||| | ||||||||||||||| ||||||||||||  ||| |||||  ||||||||||||    
T  9998663 acccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgct 9998587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 16235640 - 16235546
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  | |||| ||||||| |||||| ||||||||||||||||  |||||||| ||||||||||||||| ||||||||||||    
T  16235640 tgcgaacaaactcacaccatccaagttaatagcatacaacgacaaaatgcctacaagtaatatgatgaaatctaaatcaccagaatacccatgct 16235546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 21533660 - 21533777
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||||||| |||  |||||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| |||||||||||| |||| |    
T  21533660 gctaaaaacgtaaaaggtaaatctgcgaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagt 21533759  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||||||||||    
T  21533760 caccgaaatacccatgct 21533777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 45568296 - 45568413
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  ||||| |||||||||| |||||| ||||||| |||||| | ||||||||||||||| |||||||||||| ||||||    
T  45568296 gctaaaaacgtaaagggtgaatctgcgaataaactcacatcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaaat 45568395  T
Q  399 caccataatacccatgct 416  Q
    ||||  |||| |||||||    
T  45568396 cacccaaatatccatgct 45568413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 403
Target Start/End: Complemental strand, 29922271 - 29922190
Alignment:
Q  323 tgcgaacaaactcacatac-ccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacca 403  Q
    |||||||||||||||||   |||| ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||    
T  29922271 tgcgaacaaactcacattttccaagttaatagcatacaacggcaaaatgcctacaaacaatatgataaaatctaaatcacca 29922190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 403
Target Start/End: Complemental strand, 29971424 - 29971343
Alignment:
Q  323 tgcgaacaaactcacatac-ccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacca 403  Q
    |||||||||||||||||   |||| ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||    
T  29971424 tgcgaacaaactcacattttccaagttaatagcatacaacggcaaaatgcctacaaacaatatgataaaatctaaatcacca 29971343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 242 - 391
Target Start/End: Complemental strand, 10108535 - 10108381
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac--tagctaaaaacttaaaaggtgaatg--cgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | |||||||||  |||   ||||||||||| |||| |||||||   |||||||||||||    
T  10108535 ttgacaaaaataaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacatagctaaaaacgtaaagggtgaatctacgaacaaactcac 10108436  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    |  |||||| ||||||| |||||| | ||||||||||||||| ||||||||||||    
T  10108435 agcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaa 10108381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 242 - 391
Target Start/End: Complemental strand, 10233369 - 10233215
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac--tagctaaaaacttaaaaggtgaatg--cgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | |||||||||  |||   ||| ||||||| |||| ||||||||  |||||||||||||    
T  10233369 ttgacaaaaataaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacatagataaaaacataaagggtgaatgtacgaacaaactcac 10233270  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    |  |||||| ||||||| |||||| | ||||||||||||||| ||||||||||||    
T  10233269 agcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaa 10233215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 21289688 - 21289782
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| |||||||| |||||||||| |||| |||| |||||||    
T  21289688 tgcgaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaattaccagaatatccatgct 21289782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 408
Target Start/End: Complemental strand, 27856402 - 27856293
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||||| |||||  |||||||||||||||| | |||| ||||||| || ||| |  |||||||||||||| |||||||||||||||||||    
T  27856402 gctaaaaacgtaaaagatgaatctgcgaacaaactcacatcatccaagttaatagcatgcaacggaaaaatgcctacaaataatatgataaaatctaaat 27856303  T
Q  399 caccataata 408  Q
    ||||| ||||    
T  27856302 caccagaata 27856293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 44801058 - 44800980
Alignment:
Q  18 aatgtctcatgcttggacgctgcttatctccatgttagtgtatttcaaagctcaatcactcttgtattatcgctaatca 96  Q
    ||||| |||||||| || ||||||||| ||||||||||| ||||| |||||| ||| ||||||||||||||||||||||    
T  44801058 aatgtgtcatgcttcgatgctgcttatgtccatgttagtatatttaaaagcttaattactcttgtattatcgctaatca 44800980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 242 - 416
Target Start/End: Original strand, 9797323 - 9797502
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaatg--cgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||||| ||||||| |  |||  |  ||||| ||| |||| |||||||   | |||||||||||    
T  9797323 ttgacaaaaacaaaacgatattcattcattcaaatcgatatagtacatcagatacaaacatcgctaagaacgtaaagggtgaatatacaaacaaactcac 9797422  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |  |||||| ||||||| |||||| ||||||||||||||||| ||||||||||||  ||||||||   ||||||||||||    
T  9797423 agcacccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaacataaatcacttaaatacccatgct 9797502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 242 - 416
Target Start/End: Original strand, 52922906 - 52923085
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | |||||||||  |||  |  ||||||||| |||| |||||||  ||||||||||||||    
T  52922906 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcac 52923005  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |  | |||| ||||||| |||||| |  |||||||||||||| ||||||||||||  ||| |||||  ||||||||||||    
T  52923006 agcagccaagttaatagcatacaacggtaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgct 52923085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 415
Target Start/End: Complemental strand, 4822086 - 4821928
Alignment:
Q  260 tattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagta 355  Q
    |||||| | |||||||| |||| ||||||| | ||||||| | ||||||||| ||||   |||||  |||||||||||||||| |||||| ||||||| |    
T  4822086 tattcattcattcaaattgataaaatacattagaatcaacattgctaaaaacataaagaatgaatctgcgaacaaactcacatcacccaagttaatagca 4821987  T
Q  356 tacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgc 415  Q
    || ||   ||||||||||||||| |||||||| |||| |||||||||| |||||||||||    
T  4821986 tataacagcaaaatgcctacaaaaaatatgatgaaat-taaatcaccagaatacccatgc 4821928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 391
Target Start/End: Complemental strand, 10229775 - 10229621
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac--tagctaaaaacttaaaaggtgaatg--cgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | || ||||||  |||   ||||||||||| |||| |||||||   |||||||||||||    
T  10229775 ttgacaaaaataaaacgatattcattcattcaaatcgatagagtatatcaaatacaaacatagctaaaaacgtaaagggtgaatctacgaacaaactcac 10229676  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    |  |||||| ||||||| |||||| | ||||||||||||||| ||||||||||||    
T  10229675 agcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaa 10229621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 416
Target Start/End: Original strand, 27706118 - 27706194
Alignment:
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||| ||||||| |||||| ||||||||||||||||| |||||||| |||||||||| ||||  |||||||||||    
T  27706118 acccaagttaatagcatacaacgacaaaatgcctacaaataatatgatgaaatctaaataaccaggatacccatgct 27706194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 44797658 - 44797587
Alignment:
Q  24 tcatgcttggacgctgcttatctccatgttagtgtatttcaaagctcaatcactcttgtattatcgctaatc 95  Q
    ||||||||||| ||||| ||| || |||||||| |||||||||||| ||||||||||| |||||||||||||    
T  44797658 tcatgcttggatgctgcctatgtcaatgttagtttatttcaaagcttaatcactcttgcattatcgctaatc 44797587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 408
Target Start/End: Original strand, 38859986 - 38860072
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    ||||||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| |||||||||||| |||| |||||| ||||    
T  38859986 tgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagtcaccaaaata 38860072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 245 - 416
Target Start/End: Complemental strand, 40556998 - 40556822
Alignment:
Q  245 acaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcacat- 339  Q
    ||||||| |||||| |||||| | |||||||| || ||| |||||||||  |||  |  ||||||||| |||| |||||||  |||||||||||||||      
T  40556998 acaaaaacaaaacgatattcattcattcaaatcgacatagtacatcaaatacaaacatcgctaaaaacataaagggtgaatctgcgaacaaactcacaac 40556899  T
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||| |  |||| |||||| | ||||||||||||||| ||||||||||||  ||| |||||| ||||| ||||||    
T  40556898 acccaagtgcatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccaaaatacacatgct 40556822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 43488464 - 43488558
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||||||||||| |||||| | ||||| ||||| ||| |||||||||||| ||||||||||  ||||| ||||||    
T  43488464 tgcgaacaaactcacagcacccaaattaatagcatacaacggcaaaaagcctaaaaataatatgataaaacctaaatcaccgaaatactcatgct 43488558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 416
Target Start/End: Complemental strand, 54149228 - 54149111
Alignment:
Q  302 gctaaaaacttaaaaggtgaa--tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| ||||||  ||||||| ||||||||| |||||  ||||||| |||||| |||| |||||||||||| |||||||||||||| || |    
T  54149228 gctaaaaacgtaaagggtgaacctgcgaactaactcacatcacccaggttaatagcatacaacgacataatgcctacaaataatatgataaaatccaagt 54149129  T
Q  399 caccataatacccatgct 416  Q
    ||||  |||| |||||||    
T  54149128 caccgaaatagccatgct 54149111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 7792086 - 7792155
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||  ||||||| ||||||||||||||| |||||||||||||||||||||| | ||||| ||||||    
T  7792086 ttaatagcttacaatggcaaaatgcctacaaataatatgataaaatctaaatcactagaatactcatgct 7792155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 416
Target Start/End: Complemental strand, 14859686 - 14859610
Alignment:
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||| ||||||| |||||| ||||||||||| || || |||| |||||||||||||| |||| ||||||||||||    
T  14859686 acccaagttaatagcatacaacgacaaaatgccaaccaataatacgataaaatctaaattaccaaaatacccatgct 14859610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 416
Target Start/End: Original strand, 46304313 - 46304488
Alignment:
Q  245 acaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta-gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-a 340  Q
    ||||||| |||||| |||||| | |||||||| |||| | ||||||| |  |||  | ||||||||| |||| |||||||  |||||||||||||||  |    
T  46304313 acaaaaacaaaacgatattcattcattcaaattgatagagtacatcagatacaaacatgctaaaaacgtaaagggtgaatctgcgaacaaactcacaaca 46304412  T
Q  341 cccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    | ||| ||||||| |||||| | ||| ||||||||| | |||||||||||| |||| |||||  ||||||||||||    
T  46304413 ctcaagttaatagcatacaacggcaacatgcctacatataatatgataaaacctaagtcaccgaaatacccatgct 46304488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 409
Target Start/End: Original strand, 12946762 - 12946928
Alignment:
Q  247 aaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaatg--cgaacaaactcacat-acc 342  Q
    ||||| |||||| |||||| | |||||||| |||  ||||||||  ||||||| | ||||||| | |||| | |||||   |||||||| |||||  |||    
T  12946762 aaaaaaaaaacgatattcattcattcaaattgatggaatacatcggaatcaacattgctaaaagcataaacgatgaatcttcgaacaaattcacaacacc 12946861  T
Q  343 caaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    ||| ||||||| ||| || | ||||||||||||||| |||||||| ||||||||||||||| |||||    
T  12946862 caagttaatagcatataagggcaaaatgcctacaaaaaatatgatgaaatctaaatcaccagaatac 12946928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 402
Target Start/End: Complemental strand, 33580116 - 33580014
Alignment:
Q  303 ctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatc 399  Q
    |||||||| |||| |||||||  ||||||||| |||||  |||||| ||||||| ||| || | ||||||||||||||| |||||||||||| |||||||    
T  33580116 ctaaaaacgtaaagggtgaatctgcgaacaaaatcacaacacccaagttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaaatc 33580017  T
Q  400 acc 402  Q
    |||    
T  33580016 acc 33580014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 401
Target Start/End: Complemental strand, 46220877 - 46220798
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
    ||||||||||||| ||  |||||||||||| | |||||| |  |||||||||||||| ||||||||||||||||||||||    
T  46220877 tgcgaacaaactcgcagcacccaaattaatggcatacaacggtaaaatgcctacaaataatatgataaaatctaaatcac 46220798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 416
Target Start/End: Complemental strand, 4711692 - 4711602
Alignment:
Q  327 aacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| ||||||||||||  ||| |||||  ||||||||||||    
T  4711692 aacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgct 4711602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 6954547 - 6954664
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  || ||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| ||| ||||||||  ||| |    
T  6954547 gctaaaaacgtaaagggtgaatctgcaaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataatttgataaaacataagt 6954646  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||||||||||    
T  6954647 caccgaaatacccatgct 6954664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 325 - 402
Target Start/End: Complemental strand, 21313248 - 21313170
Alignment:
Q  325 cgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    ||||||||||||||  |||||| ||||||| |||||| | ||||||| ||||||| ||||||||||||||||| |||||    
T  21313248 cgaacaaactcacagcacccaagttaatagcatacaacggcaaaatggctacaaataatatgataaaatctaagtcacc 21313170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 416
Target Start/End: Complemental strand, 21431850 - 21431733
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||| ||||||  |||||| ||||||  |||||| | ||||||||||||||| ||||||||||||  ||| |    
T  21431850 gctaaaaacgtaaatggtgaatctgcgaacaatctcacagcacccaagttaatatcatacaacggcaaaatgcctacaaataatatgataaaacttaagt 21431751  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||||||||||    
T  21431750 caccgaaatacccatgct 21431733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 347 - 401
Target Start/End: Original strand, 26275718 - 26275772
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||| ||||    
T  26275718 ttaatagcatacaatgacaaaatgcctacaaataatatgataaaatataagtcac 26275772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 416
Target Start/End: Complemental strand, 19339372 - 19339296
Alignment:
Q  339 tacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||| ||||||  |||||| ||||||||||||||| | ||||||||||||||||| |||| | ||||||||||||    
T  19339372 tacccaagttaataacatacaacgacaaaatgcctacagataatatgataaaatctaagtcacga-aatacccatgct 19339296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 412
Target Start/End: Original strand, 26739256 - 26739321
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataataccca 412  Q
    ||||||| |||||| | |||||||| |||||| ||||||||||||||||||| | |||||||||||    
T  26739256 ttaatagcatacaacgccaaaatgcttacaaataatatgataaaatctaaattatcataataccca 26739321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 391
Target Start/End: Original strand, 48650608 - 48650677
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    ||||||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| ||||||||||||    
T  48650608 tgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaa 48650677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 51487270 - 51487217
Alignment:
Q  361 tgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    |||||||||| ||||||| |||||||||||||||||||||||| ||||| ||||    
T  51487270 tgacaaaatgtctacaaataatatgataaaatctaaatcaccagaatactcatg 51487217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 396
Target Start/End: Original strand, 20987631 - 20987703
Alignment:
Q  325 cgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    ||||||||||||||| | |||| ||||||| ||||||   ||||||||||||||| |||||||||||||||||    
T  20987631 cgaacaaactcacatcatccaagttaatagcatacaactgcaaaatgcctacaaataatatgataaaatctaa 20987703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 414
Target Start/End: Original strand, 44959867 - 44959939
Alignment:
Q  342 ccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    |||| ||||||| |||||||| ||||||||||||||| ||||||||||||  ||| |||||  ||||||||||    
T  44959867 ccaagttaatagcatacaatggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatg 44959939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 402
Target Start/End: Complemental strand, 19619902 - 19619847
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    ||||||| |||||| | ||||||||||||||| ||||||||||||||||| |||||    
T  19619902 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaatctaagtcacc 19619847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 409
Target Start/End: Complemental strand, 38142714 - 38142652
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    ||||||||||||||  | |||||||||||||| |||||||||| |||||||||| || |||||    
T  38142714 ttaatagtatacaacaataaaatgcctacaaataatatgataagatctaaatcatcagaatac 38142652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 40487539 - 40487445
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||  ||| || | ||||||||||||||| |||||||||||| |||| |||||  |||||| |||||    
T  40487539 tgcgaacaaactcacaacacccaagttaataacatataacggcaaaatgcctacaaataatatgataaaacctaagtcaccgaaatacctatgct 40487445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 41818427 - 41818341
Alignment:
Q  325 cgaacaaactcacatacccaaa-ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacc 410  Q
    |||||||||||||||  ||||  ||||||| || |||  |||||||||||||||| |||| ||||||||| ||| ||||||||||||    
T  41818427 cgaacaaactcacatcaccaatgttaatagcatgcaacaacaaaatgcctacaaataatacgataaaatcaaaaccaccataatacc 41818341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 47041899 - 47042016
Alignment:
Q  302 gctaaaaacttaaaaggtgaa--tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||||||||||  |||||||||||||| || ||| || ||||||| ||| || || |||| ||||||||| |||||||| ||| |||| |    
T  47041899 gctaaaaacgtaaaaggtgaatctgcgaacaaactcatatcacctaagttaatagcataaaacgataaaacgcctacaaataatatgatgaaacctaagt 47041998  T
Q  399 caccataatacccatgct 416  Q
    ||||| ||| | ||||||    
T  47041999 caccaaaattcacatgct 47042016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 400
Target Start/End: Complemental strand, 53508400 - 53508362
Alignment:
Q  362 gacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  53508400 gacaaaatgcctacaaataatatgataaaatctaaatca 53508362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 396
Target Start/End: Original strand, 23799789 - 23799858
Alignment:
Q  328 acaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    |||||||||||  |||||| ||||||  |||||| | ||||||||||||||| |||||||||||||||||    
T  23799789 acaaactcacaacacccaagttaataacatacaacggcaaaatgcctacaaataatatgataaaatctaa 23799858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 413
Target Start/End: Original strand, 12149661 - 12149749
Alignment:
Q  326 gaacaaactcaca-tacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccat 413  Q
    ||||||||||||| ||||||| ||||||| |||||| | |||||||||||| |  ||||||||||||  ||| |||||  |||||||||    
T  12149661 gaacaaactcacagtacccaacttaatagcatacaacggcaaaatgcctacgattaatatgataaaacataattcaccgaaatacccat 12149749  T

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Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 408
Target Start/End: Complemental strand, 32246595 - 32246551
Alignment:
Q  364 caaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    |||| |||||||||| |||||||||||||||||||||||| ||||    
T  32246595 caaattgcctacaaataatatgataaaatctaaatcaccagaata 32246551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 411
Target Start/End: Original strand, 3085193 - 3085264
Alignment:
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataataccc 411  Q
    |||||| |||||||  ||||| | ||||||||||||||| |||||||| || ||||||||| || |||||||    
T  3085193 acccaatttaatagcctacaacggcaaaatgcctacaaataatatgatgaattctaaatcatcagaataccc 3085264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 402
Target Start/End: Complemental strand, 38546035 - 38545933
Alignment:
Q  303 ctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatc 399  Q
    |||||||| |||| |||||||  | |||||||||| ||  |||||| ||||||| ||| || | ||||||||||||||| |||||||||||| |||| ||    
T  38546035 ctaaaaacgtaaagggtgaatctgggaacaaactcccaccacccaagttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaagtc 38545936  T
Q  400 acc 402  Q
    |||    
T  38545935 acc 38545933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 396
Target Start/End: Original strand, 12050522 - 12050596
Alignment:
Q  323 tgcgaacaaactcaca-tacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    |||||||||||||||| ||  ||| ||||||  |||||| |||||||||| |||||| |||||||||||| ||||    
T  12050522 tgcgaacaaactcacactattcaagttaataacatacaacgacaaaatgcttacaaataatatgataaaacctaa 12050596  T

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Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 20464844 - 20464938
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||| || || ||| ||||||| |||| | ||||||||||  ||||| ||||||||||||| ||| |||||  ||||| ||||||    
T  20464844 tgcgaacaaactcatatcacacaagttaatagcatacgacgacaaaatgcacacaaataatatgataaaatttaagtcaccgaaatactcatgct 20464938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 408
Target Start/End: Complemental strand, 9173929 - 9173876
Alignment:
Q  355 atacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    |||||| | ||||||||||||||| |||||||| |||||||||| |||| ||||    
T  9173929 atacaacggcaaaatgcctacaaataatatgatcaaatctaaataaccaaaata 9173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 408
Target Start/End: Original strand, 52497124 - 52497184
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    ||||||| ||| ||||| |||||||||| ||| ||||||||||||| |||||| ||||||||    
T  52497124 ttaatagcatataatgataaaatgccta-aaataatatgataaaatttaaatcgccataata 52497184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 7448767 - 7448882
Alignment:
Q  304 taaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    ||||||| |||| |||||||  |||||||||||||||| ||| || ||||||| |||||  | ||||||| ||||||| |||||||| |||  ||| |||    
T  7448767 taaaaacgtaaatggtgaatctgcgaacaaactcacatcacctaagttaatagcatacagcggcaaaatgtctacaaataatatgatgaaacttaagtca 7448866  T
Q  401 ccataatacccatgct 416  Q
    ||  ||||| ||||||    
T  7448867 ccgaaatactcatgct 7448882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 7456909 - 7457024
Alignment:
Q  304 taaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    ||||||| |||| |||||||  |||||||||||||||| ||| || ||||||| |||||  | ||||||| ||||||| |||||||| |||  ||| |||    
T  7456909 taaaaacgtaaatggtgaatctgcgaacaaactcacatcacctaagttaatagcatacagcggcaaaatgtctacaaataatatgatgaaacttaagtca 7457008  T
Q  401 ccataatacccatgct 416  Q
    ||  ||||| ||||||    
T  7457009 ccgaaatactcatgct 7457024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 400
Target Start/End: Original strand, 26716011 - 26716059
Alignment:
Q  352 agtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    ||||||||| || ||||||| |||||| ||||||||||||| |||||||    
T  26716011 agtatacaacgaaaaaatgcttacaaataatatgataaaatataaatca 26716059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 37040982 - 37040903
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    ||||||||||||||||  |||||| ||||||  ||| |||||||||||| ||||||  |||||||| |||||||| |||||    
T  37040982 tgcgaacaaactcacagcacccaagttaataacataaaatgacaaaatg-ctacaactaatatgattaaatctaagtcacc 37040903  T

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Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 414
Target Start/End: Original strand, 52115899 - 52115987
Alignment:
Q  327 aacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    ||||||||||||  |||||| ||||||  ||| ||  |||||||| ||||||| ||||||||| |||||||||||  | ||||||||||    
T  52115899 aacaaactcacaacacccaagttaataacatataacaacaaaatgactacaaataatatgatacaatctaaatcattagaatacccatg 52115987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 6e-38; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 245 - 416
Target Start/End: Complemental strand, 31297117 - 31296942
Alignment:
Q  245 acaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaa--tgcgaacaaactcacat-a 340  Q
    ||||||| |||||| |||||| | |||||||| |||| ||||||||| ||||||| | ||||||||| |||| ||||||  |||||||||||||| || |    
T  31297117 acaaaaacaaaacgatattcattcattcaaattgatagaatacatcagaatcaacatcgctaaaaacgtaaagggtgaaaatgcgaacaaactcaaatca 31297018  T
Q  341 cccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
     |||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  31297017 tccaaattaatagcatacaacgacaaaatgcctacaaacaatatgataaaatataaatcaccagaatactcatgct 31296942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 242 - 416
Target Start/End: Complemental strand, 30493833 - 30493654
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatc-aac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||||||||| ||||||||||||| | |||||||| |||| |||| |||| |||| ||| | ||||||||| |||| |||||||  ||||||||| ||||    
T  30493833 ttgacaaaaataaaacgttattcattcattcaaatagatagaatatatcagaatctaacatcgctaaaaacgtaaagggtgaatctgcgaacaaattcac 30493734  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |  |||||  ||||||| |||||| | |||||||||||||||||| |||||||||| |||||||||| ||||||||||||    
T  30493733 aacacccaggttaatagcatacaacggcaaaatgcctacaaacaacatgataaaatataaatcaccaaaatacccatgct 30493654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 242 - 416
Target Start/End: Original strand, 3913363 - 3913542
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | ||||||| |  |||  |  ||||||||| |||| |||| ||  ||||||||||||||    
T  3913363 ttgacaaaaataaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgcatctgcgaacaaactcac 3913462  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |  |||||| ||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||  ||||||||||||    
T  3913463 aacacccaagttaatagcatacaatggcaaaatgcctacaaataatatgataaaacctaaatcaccgaaatacccatgct 3913542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 416
Target Start/End: Original strand, 7975989 - 7976155
Alignment:
Q  254 aaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaatta 349  Q
    ||||| |||||| | ||| |||| |||| ||||||||| ||||||| | ||||||||| |||| | |||||  |||||||||||||||  ||| || |||    
T  7975989 aaacgatattcattcatttaaattgatagaatacatcagaatcaacattgctaaaaacataaaggatgaatatgcgaacaaactcacaacacctaagtta 7976088  T
Q  350 atagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||| |||||| | ||||||||||||||||  ||||||||||| |||||||||| ||||||||||||    
T  7976089 atagcatacaacggcaaaatgcctacaaacggtatgataaaatttaaatcaccagaatacccatgct 7976155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 416
Target Start/End: Complemental strand, 30776902 - 30776785
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| || | | | ||||||||||||||| |||||||||||||||||||    
T  30776902 gctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcattccacggcaaaatgcctacaaataatatgataaaatctaaat 30776803  T
Q  399 caccataatacccatgct 416  Q
    ||||| ||||||||||||    
T  30776802 caccagaatacccatgct 30776785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 245 - 413
Target Start/End: Complemental strand, 28981474 - 28981302
Alignment:
Q  245 acaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcacatac 341  Q
    ||||||| |||||| ||||||    ||||||| |||| ||||||||| ||||||| | ||||||||| |||| |||||||  | |||||||||||||       
T  28981474 acaaaaataaaacgatattcatacgttcaaattgatagaatacatcagaatcaacatcgctaaaaacgtaaagggtgaatatgtgaacaaactcacaaca 28981375  T
Q  342 ccaaa-ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccat 413  Q
    ||||| ||||||| ||||||  ||||||| ||||||| |||||||||||||||||||| |||| |||||||||    
T  28981374 ccaaagttaatagcatacaacaacaaaattcctacaagcaatatgataaaatctaaatgaccaaaatacccat 28981302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 416
Target Start/End: Complemental strand, 9380240 - 9380145
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||||||  | ||||  |||||| |||||| |||||||||| |||||| |||||||||||||||||||||||| ||||||||||||    
T  9380240 atgcgaacaaactcacaacatccaagataatagaatacaacgacaaaatgcatacaaataatatgataaaatctaaatcaccaaaatacccatgct 9380145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 546247 - 546153
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| |||||||| ||||||||| ||||| ||||||||||||    
T  546247 tgcgaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaaccaccagaatacccatgct 546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 302 - 391
Target Start/End: Original strand, 9341502 - 9341594
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  9341502 gctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctacaaacaatatgataaaa 9341594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 340 - 416
Target Start/End: Complemental strand, 1523606 - 1523530
Alignment:
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||| ||||||| || | | ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  1523606 acccaagttaatagcattccacgacaaaatgcctacaaataatatgataaaatctaaatcaccagaatacccatgct 1523530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 414
Target Start/End: Complemental strand, 606441 - 606328
Alignment:
Q  304 taaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    ||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| |||||||| ||||||||||||||| ||||||||||||  ||| |||    
T  606441 taaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaatggcaaaatgcctacaaataatatgataaaacttaagtca 606342  T
Q  401 ccataatacccatg 414  Q
    ||  ||||||||||    
T  606341 ccgaaatacccatg 606328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 396
Target Start/End: Complemental strand, 20226067 - 20225993
Alignment:
Q  323 tgcgaacaaactcaca-tacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    |||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||||| ||||||||||| |||||    
T  20226067 tgcgaacaaactcacaatacccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaattctaa 20225993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 396
Target Start/End: Complemental strand, 22120051 - 22119977
Alignment:
Q  323 tgcgaacaaactcaca-tacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    |||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||||| ||||||||||| |||||    
T  22120051 tgcgaacaaactcacaatacccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaattctaa 22119977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 23128834 - 23128740
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||||||||||| |||||| | ||||||||||||||| ||||||||||||  ||| |||||  ||||||||||||    
T  23128834 tgcgaacaaactcacagcacccaaattaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgct 23128740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 414
Target Start/End: Original strand, 34185486 - 34185659
Alignment:
Q  245 acaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaatg--cgaacaaactcacat-a 340  Q
    ||||||| |||| | |||||| | |||||||| |||| | || |||| | ||||| | ||||||||  ||||||||||||   |||| ||| |||||| |    
T  34185486 acaaaaataaaatgatattcattcattcaaattgatagagtatatcagattcaacatcgctaaaaaagtaaaaggtgaatctacgaataaagtcacatca 34185585  T
Q  341 cccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    ||||| || |||||| | || |||||||| |||||||| |||||||||||||||||||||||| ||||||||||    
T  34185586 cccaagttgatagtacataacgacaaaatacctacaaataatatgataaaatctaaatcaccagaatacccatg 34185659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 416
Target Start/End: Original strand, 33052958 - 33053136
Alignment:
Q  243 tgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcaca 338  Q
    ||||||||| |||||| |||||| | |||||||| |||| | |||||||||  |||  |  ||||||||| |||| |||||||  |||||||||||||||    
T  33052958 tgacaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacattgctaaaaacgtaaagggtgaatatgcgaacaaactcaca 33053057  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
      | |||| ||||||| |||||| | ||||||||||||||| ||||||||||||  ||| ||||   ||||||||||||    
T  33053058 gcatccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcactgaaatacccatgct 33053136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 409
Target Start/End: Complemental strand, 14802043 - 14801956
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    ||||||||||||||||  | |||| ||||||| |||||| | ||||||||||||||| |||||||| ||||||||||||||| |||||    
T  14802043 tgcgaacaaactcacagcatccaagttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccaaaatac 14801956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 416
Target Start/End: Original strand, 32327009 - 32327185
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | ||||||| |  |||  |  ||||||||| |||| |||||||  ||||||||||||||    
T  32327009 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatatgcgaacaaactcac 32327108  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |  |||||| ||||||| ||||   | ||||||||||||||| |||||||||||| ||||||||||| | ||| ||||||    
T  32327109 agcacccaagttaatagcatac---ggcaaaatgcctacaaataatatgataaaacctaaatcaccaaactactcatgct 32327185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 401
Target Start/End: Original strand, 528204 - 528303
Alignment:
Q  303 ctaaaaacttaaaaggtgaat--gcgaacaaactcacatacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    |||||||| |||||| |||||  | ||||||||| |||| | || |||||||| |||||| |||||||| |||||||| |||||||||||||||||||||    
T  528204 ctaaaaacataaaagatgaatctgtgaacaaactaacat-cacatattaatagcatacaacgacaaaatacctacaaataatatgataaaatctaaatca 528302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 416
Target Start/End: Complemental strand, 12170685 - 12170590
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||| ||||||||||  |||||| ||||||| ||||||   ||||||||||||||| |||||||| ||| ||||||||||  ||||||||||||    
T  12170685 atgcgagcaaactcacagcacccaagttaatagcatacaacagcaaaatgcctacaaataatatgatcaaacctaaatcaccgaaatacccatgct 12170590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 303 - 416
Target Start/End: Complemental strand, 127905 - 127791
Alignment:
Q  303 ctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatc 399  Q
    |||||||| ||||||||||||  | |||||||||||||  | |||| ||||||| |  ||| | ||||||||||||||| ||||||||||||||||||||    
T  127905 ctaaaaacgtaaaaggtgaatatgtgaacaaactcacagcaaccaagttaatagca--caacggcaaaatgcctacaaataatatgataaaatctaaatc 127808  T
Q  400 accataatacccatgct 416  Q
    |||  ||||| ||||||    
T  127807 accgaaatactcatgct 127791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 400
Target Start/End: Complemental strand, 8102965 - 8102864
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| ||||||||||||  || ||||||||||||  |||||| ||||||  || | | | ||||||||||||||| |||||||||||||||||||    
T  8102965 gctaaaaacgtaaaaggtgaatctgcaaacaaactcacagcacccaagttaataacattccacggcaaaatgcctacaaataatatgataaaatctaaat 8102866  T
Q  399 ca 400  Q
    ||    
T  8102865 ca 8102864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 391
Target Start/End: Original strand, 14174862 - 14175014
Alignment:
Q  244 gacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcacat 339  Q
    |||||||| |||||| |||||| | |||||||| |||||| ||||||| |  |||  |  ||||||||| ||||||||||||  ||||||||||||||||    
T  14174862 gacaaaaacaaaacgatattcattcattcaaatcgatatattacatcagatacaaacattgctaaaaacgtaaaaggtgaatctgcgaacaaactcacat 14174961  T
Q  340 -acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
     || ||| |||| || ||| || |  |||||||||||||| ||||||||||||    
T  14174962 cactcaagttaacagcataaaacggaaaaatgcctacaaataatatgataaaa 14175014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 391
Target Start/End: Original strand, 14179398 - 14179550
Alignment:
Q  244 gacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcacat 339  Q
    |||||||| |||||| |||||| | |||||||| |||||| ||||||| |  |||  |  ||||||||| ||||||||||||  ||||||||||||||||    
T  14179398 gacaaaaacaaaacgatattcattcattcaaatcgatatattacatcagatacaaacattgctaaaaacgtaaaaggtgaatctgcgaacaaactcacat 14179497  T
Q  340 -acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
     || ||| |||| || ||| || |  |||||||||||||| ||||||||||||    
T  14179498 cactcaagttaacagcataaaacggaaaaatgcctacaaataatatgataaaa 14179550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 302 - 391
Target Start/End: Original strand, 67852 - 67944
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| |||||| | ||||||||||| ||| ||||||||||||    
T  67852 gctaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctataaataatatgataaaa 67944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 32191629 - 32191698
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||| |||||||| |||||||||||||||   |||||||||||||||||||||| ||| | ||||||    
T  32191629 ttaatagcatacaatggcaaaatgcctacaaattgtatgataaaatctaaatcaccagaatgctcatgct 32191698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 402
Target Start/End: Original strand, 13546597 - 13546655
Alignment:
Q  344 aaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    |||||||||| |||||| |||||||| |||||||| ||||||||||| ||||| |||||    
T  13546597 aaattaatagcatacaacgacaaaatacctacaaataatatgataaattctaagtcacc 13546655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 416
Target Start/End: Original strand, 31852091 - 31852161
Alignment:
Q  346 attaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||| ||||||  |||||||| ||| ||| ||||||||||||| |||||||||| ||||| ||||||    
T  31852091 attaatagcatacaacaacaaaatgtctataaataatatgataaaatttaaatcaccagaatactcatgct 31852161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 414
Target Start/End: Original strand, 29255323 - 29255412
Alignment:
Q  326 gaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    |||||||||||||  |||||| ||||||| ||||||     ||||||||||||| ||||||||||||||||| |||||  ||||||||||    
T  29255323 gaacaaactcacaacacccaagttaatagcatacaacagtgaaatgcctacaaataatatgataaaatctaagtcaccgaaatacccatg 29255412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 356 - 409
Target Start/End: Complemental strand, 29743179 - 29743126
Alignment:
Q  356 tacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    ||||| ||||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  29743179 tacaacgacaaaatgcctataaataatatgataagatctaaatcaccagaatac 29743126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 414
Target Start/End: Original strand, 30608409 - 30608481
Alignment:
Q  342 ccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    |||| ||||||| |||||| |  |||||||||||||| ||||||||||||| ||| |||||  ||||||||||    
T  30608409 ccaagttaatagcatacaacggtaaaatgcctacaaataatatgataaaatataagtcaccgaaatacccatg 30608481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 384
Target Start/End: Original strand, 21426537 - 21426622
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcaca-tacccaaattaatagtatacaatgacaaaatgcctacaaacaatat 384  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| |||||| | ||||||| ||||||| |||||    
T  21426537 gctaaaaacgtaaacggtgaatatgcgaacaaactcacagcacccaagttaatagcatacaacggcaaaatgtctacaaataatat 21426622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 26588323 - 26588440
Alignment:
Q  302 gctaaaaacttaaaaggtgaa--tgcgaacaaactcac-atacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    |||||||||||||| ||||||  ||| ||||||||||| | | |||| |||| || ||||||   ||||||| ||| ||| |||||||||||||| ||||    
T  26588323 gctaaaaacttaaagggtgaagctgcaaacaaactcacgacatccaagttaagagcatacaacagcaaaatgtctaaaaataatatgataaaatcaaaat 26588422  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||| ||||||    
T  26588423 cacccaaatactcatgct 26588440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 414
Target Start/End: Original strand, 27097495 - 27097608
Alignment:
Q  304 taaaaacttaaaaggtgaat--gcgaacaaactcaca-tacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    ||||||| ||||| ||||||  | ||||||| ||||| ||| ||| ||||||| ||||  ||  |||||||||| | | |||||||||||||||||||||    
T  27097495 taaaaacgtaaaatgtgaatttgtgaacaaagtcacaatactcaagttaatagcatacgctggtaaaatgcctagagataatatgataaaatctaaatca 27097594  T
Q  401 ccataatacccatg 414  Q
    ||| |||| |||||    
T  27097595 ccaaaatatccatg 27097608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 402
Target Start/End: Complemental strand, 32802763 - 32802682
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    |||||| ||||||||||  |||||| ||||||  |||||| || ||||| |||||||| ||||||||||||| ||| |||||    
T  32802763 atgcgatcaaactcacagcacccaatttaatatcatacaacgataaaatacctacaaataatatgataaaatttaagtcacc 32802682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 416
Target Start/End: Original strand, 14846137 - 14846189
Alignment:
Q  364 caaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||| |||||||||||| |||| |||||| ||| | ||||||    
T  14846137 caaaatgcctacaaataatatgataaaacctaagtcaccaaaattcacatgct 14846189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 5e-26; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 323 - 410
Target Start/End: Original strand, 18890571 - 18890659
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacc 410  Q
    ||||||||||||||||  |||||| ||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18890571 tgcgaacaaactcacagcacccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaatctaaatcaccataatacc 18890659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 408
Target Start/End: Original strand, 7198010 - 7198153
Alignment:
Q  269 attcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgac 364  Q
    |||||||| |||| ||||||||| ||||||  | ||||||||| |||| |||||||  ||||| |||||||||  |||||||||||||| |||||| |||    
T  7198010 attcaaattgatagaatacatcagaatcaagatcgctaaaaacgtaaagggtgaatctgcgaataaactcacaacacccaaattaatagcatacaacgac 7198109  T
Q  365 aaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    ||||| ||| |||| |||||||||||||||||||||||| ||||    
T  7198110 aaaattcctgcaaataatatgataaaatctaaatcaccaaaata 7198153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 242 - 409
Target Start/End: Complemental strand, 15344611 - 15344438
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac---tagctaaaaacttaaaaggtgaat--gcgaacaaactca 336  Q
    |||||||||| |||| | |||| | | |||||||| |||| ||||||||| ||||||    | ||||||||| |||| | |||||  |||||||||||||    
T  15344611 ttgacaaaaataaaatgatatttattcattcaaattgatagaatacatcagaatcaaaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactca 15344512  T
Q  337 cat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    ||  |||||| ||||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  15344511 cagcacccaagttaatagcatacaacgacaaaatgcctacaaataatatgatataatctaaatcaccagaatac 15344438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 242 - 409
Target Start/End: Complemental strand, 15433676 - 15433503
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac---tagctaaaaacttaaaaggtgaat--gcgaacaaactca 336  Q
    |||||||||| |||| | |||| | | |||||||| |||| ||||||||| ||||||    | ||||||||| |||| | |||||  |||||||||||||    
T  15433676 ttgacaaaaataaaatgatatttattcattcaaattgatagaatacatcagaatcaaaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactca 15433577  T
Q  337 cat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    ||  |||||| ||||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  15433576 cagcacccaagttaatagcatacaacgacaaaatgcctacaaataatatgatataatctaaatcaccagaatac 15433503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 242 - 409
Target Start/End: Complemental strand, 15524980 - 15524807
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac---tagctaaaaacttaaaaggtgaat--gcgaacaaactca 336  Q
    |||||||||| |||| | |||| | | |||||||| |||| ||||||||| ||||||    | ||||||||| |||| | |||||  |||||||||||||    
T  15524980 ttgacaaaaataaaatgatatttattcattcaaattgatagaatacatcagaatcaaaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactca 15524881  T
Q  337 cat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    ||  |||||| ||||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  15524880 cagcacccaagttaatagcatacaacgacaaaatgcctacaaataatatgatataatctaaatcaccagaatac 15524807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 41896734 - 41896640
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||| |||||| ||||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||    
T  41896734 tgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctacaaataatatgatgaaatctaaatcaccagaatactcatgct 41896640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 42046438 - 42046344
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||| |||| ||| ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  42046438 tgcgaacaaactcacaacacccaagttaatagcatacgatgtcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgct 42046344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 242 - 409
Target Start/End: Original strand, 1236485 - 1236656
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcaca 338  Q
    |||||||||| |||| | |||||| | |||||||| |||| ||||||||| ||||||  | ||||||||| |||| | |||||  |||||||||||||||    
T  1236485 ttgacaaaaacaaaatgatattcattcattcaaatcgatagaatacatcagaatcaagattgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 1236584  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
      |||||| ||||||| |||||| | ||||||||||| ||| | ||||||| |||||||||||||| |||||    
T  1236585 gcacccaagttaatagcatacaacggcaaaatgcctaaaaatagtatgatataatctaaatcaccagaatac 1236656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 7883090 - 7883207
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| |||||||||||| |||| |    
T  7883090 gctaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaagttaataggatacaacggcaaaatgcctacaaataatatgataaaacctaagt 7883189  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||||||||||    
T  7883190 caccgaaatacccatgct 7883207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 302 - 412
Target Start/End: Original strand, 16928606 - 16928719
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| |||||||| ||||||||||||||| |||||||||||| |||| |    
T  16928606 gctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaatggcaaaatgcctacaaataatatgataaaacctaagt 16928705  T
Q  399 caccataataccca 412  Q
    ||||  ||||||||    
T  16928706 caccgaaataccca 16928719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 23230860 - 23230766
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||| |||||| ||||||||||||||||| |||||||||||| |||| |||||  ||||||||||||    
T  23230860 tgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaacctaagtcaccgaaatacccatgct 23230766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 242 - 400
Target Start/End: Complemental strand, 21238089 - 21237929
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcaca 338  Q
    |||||||||| |||||  |||||| | |||||||| |||| ||||||||| ||||||| | ||||||||| |||| |||||||  | |||||||||||||    
T  21238089 ttgacaaaaacaaaacaatattcattcattcaaattgatagaatacatcataatcaacatcgctaaaaacgtaaagggtgaatctgtgaacaaactcaca 21237990  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
      |||||  ||||||| |||||| |||||||  ||||||||||  ||||||||||||||||||    
T  21237989 acacccatgttaataggatacaacgacaaaaatcctacaaaca--atgataaaatctaaatca 21237929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 408
Target Start/End: Complemental strand, 8868048 - 8867936
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaatta---atagtatacaatgacaaaatgcctacaaacaatatgataaaatcta 395  Q
    ||||||||| ||||||||||||  |||||||||||||||  |||||| |||   |||  |||||| ||||||||||||||||| ||||||||||||||||    
T  8868048 gctaaaaacgtaaaaggtgaatttgcgaacaaactcacaccacccaagttataaataacatacaacgacaaaatgcctacaaataatatgataaaatcta 8867949  T
Q  396 aatcaccataata 408  Q
    |||||||| ||||    
T  8867948 aatcaccagaata 8867936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 14585894 - 14585800
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||| |||||| | ||||| ||||||||| |||||||| |||||||||||||||  |||||||||||    
T  14585894 tgcgaacaaactcacagcacccaagttaatagcatacaacggcaaaacgcctacaaataatatgatgaaatctaaatcaccaggatacccatgct 14585800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 33347370 - 33347487
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||  ||||||||||||  ||||||||||||| |  ||| || ||||||| |||||||||||||||||||||||| ||||||||||| ||| | |    
T  33347370 gctaaaaaggtaaaaggtgaatctgcgaacaaactcataacacctaatttaatagcatacaatgacaaaatgcctacaaataatatgataaattctgagt 33347469  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||||||||||    
T  33347470 caccgaaatacccatgct 33347487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 416
Target Start/End: Original strand, 43833872 - 43833962
Alignment:
Q  327 aacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||    
T  43833872 aacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaaactaaatcaccagaatactcatgct 43833962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 343 - 416
Target Start/End: Complemental strand, 39657650 - 39657577
Alignment:
Q  343 caaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||| |||| |||||| | ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  39657650 caaattgatagaatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgct 39657577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 408
Target Start/End: Original strand, 24099044 - 24099208
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcac- 337  Q
    |||||||||| |||||| |||||| | |||||||| || | ||||||||| ||||||| | ||||||||| |||| |||||||  ||||||||||||||     
T  24099044 ttgacaaaaacaaaacgatattcattcattcaaattgacagaatacatcagaatcaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 24099143  T
Q  338 atacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    | | |||| ||||||| ||| |||       |||||||||| |||||||||||||||||||||||| ||||    
T  24099144 acatccaagttaatagcatataat------ttgcctacaaataatatgataaaatctaaatcaccaaaata 24099208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 45445662 - 45445777
Alignment:
Q  304 taaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    ||||||| ||||||||||||  |||||||||||||||  | |||| ||||||| ||| ||  |||||||||||||||| ||||||||||||||||| |||    
T  45445662 taaaaacgtaaaaggtgaatatgcgaacaaactcacaacatccaagttaatagcataaaacaacaaaatgcctacaaataatatgataaaatctaagtca 45445761  T
Q  401 ccataatacccatgct 416  Q
    ||| ||| | ||||||    
T  45445762 ccaaaattcacatgct 45445777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 322 - 416
Target Start/End: Original strand, 27110336 - 27110431
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||||||  |||||| ||||||| |||||| || |||||| ||||||| ||||||||||||||||| |||| | ||||| ||||||    
T  27110336 atgcgaacaaactcacaacacccaagttaatagcatacaacgataaaatgtctacaaataatatgataaaatctaagtcactaaaatacacatgct 27110431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 396
Target Start/End: Original strand, 41060135 - 41060209
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    ||||||||||||||||| ||||||||| |||| ||||||  |||||||| ||||||| |||||||||||||||||    
T  41060135 tgcgaacaaactcacatcacccaaattgatagcatacaacaacaaaatggctacaaataatatgataaaatctaa 41060209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 471013 - 471132
Alignment:
Q  302 gctaaaaacttaaaaggtgaatg--cgaacaaactcacat-acccaaattaatagtatacaatgacaaaa--tgcctacaaacaatatgataaaatctaa 396  Q
    ||||||||| ||||| ||||||   |||||||| |||||| |||||| ||||||  |||||  |||||||  |||||||||| |||||||||||||||||    
T  471013 gctaaaaacataaaatgtgaatctacgaacaaaatcacatcacccaagttaataacatacatcgacaaaaaatgcctacaaataatatgataaaatctaa 471112  T
Q  397 atcaccataatacccatgct 416  Q
    |||| || ||||||||||||    
T  471113 atcatcagaatacccatgct 471132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 408
Target Start/End: Original strand, 29617171 - 29617232
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    ||||||| ||||||  |||||||||||||||| |||||||||||||||||||||||| ||||    
T  29617171 ttaatagcatacaacaacaaaatgcctacaaataatatgataaaatctaaatcaccagaata 29617232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 302 - 391
Target Start/End: Original strand, 31013457 - 31013549
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| ||||||||||||    
T  31013457 gctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaa 31013549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 350 - 414
Target Start/End: Original strand, 18846366 - 18846430
Alignment:
Q  350 atagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    |||| |||||||  ||||||||||||||| ||||| |||||||||||||||||||||||| ||||    
T  18846366 atagcatacaatagcaaaatgcctacaaataatataataaaatctaaatcaccataatactcatg 18846430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 347 - 397
Target Start/End: Original strand, 28086709 - 28086759
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaa 397  Q
    ||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  28086709 ttaatagcatacaacgacaaaatgcctacaaataatatgataaaatctaaa 28086759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 396
Target Start/End: Complemental strand, 28897926 - 28897852
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    ||||||||||||||||  |||||  ||||||| ||| |||||||||||| ||||||| |||||||||||||||||    
T  28897926 tgcgaacaaactcacaacacccacgttaatagcatagaatgacaaaatgactacaaataatatgataaaatctaa 28897852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 409
Target Start/End: Original strand, 1239287 - 1239356
Alignment:
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    |||||| ||||||| |||||| | ||||||||||||||| | ||||||| |||||||||||||| |||||    
T  1239287 acccaagttaatagcatacaacgtcaaaatgcctacaaatagtatgatataatctaaatcaccagaatac 1239356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 401
Target Start/End: Complemental strand, 5046968 - 5046891
Alignment:
Q  325 cgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
    ||||||||||||||| |||||| ||||||  |||||| || |||||||||||||| ||||||||||| ||||| ||||    
T  5046968 cgaacaaactcacatcacccaagttaataacatacaacgataaaatgcctacaaataatatgataaattctaagtcac 5046891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 14916085 - 14916138
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    ||||||| ||||||   |||||||||||||||||||||||||||||||||||||    
T  14916085 ttaatagcatacaactgcaaaatgcctacaaacaatatgataaaatctaaatca 14916138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 415
Target Start/End: Original strand, 26469058 - 26469111
Alignment:
Q  362 gacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgc 415  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||| |||||    
T  26469058 gacaaaatacctacaaataatatgataaaatctaaatcaccagaatacacatgc 26469111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 37971500 - 37971420
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    ||||||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| ||| |||||||| |||| |||||    
T  37971500 tgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatgtgataaaacctaagtcacc 37971420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 387
Target Start/End: Complemental strand, 3673743 - 3673593
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaa-atcaacta-gctaaaaacttaaaaggtgaa--tgcgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||||||||||  | | || ||| | ||||||||| |||| ||||||  ||| |||||||||||    
T  3673743 ttgacaaaaacaaaacgatattcattcattcaaattgatataatacactagatataaacaacgctaaaaacgtaaagggtgaaactgcaaacaaactcac 3673644  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgat 387  Q
    |  | |||| ||||||| |||||| | ||||||||||||||| ||||||||    
T  3673643 agcatccaagttaataggatacaacggcaaaatgcctacaaataatatgat 3673593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 5333623 - 5333552
Alignment:
Q  345 aattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||| ||||||  ||||||||| |||||| ||||||| |||||||||||||| | ||||| ||||||    
T  5333623 aattaatagcatacaacaacaaaatgcatacaaataatatgacaaaatctaaatcactagaatactcatgct 5333552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 10377906 - 10377812
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||| ||||||||||  |||||| ||||||| |||||| | ||||||||||||||| ||||||||||||  ||| || ||  ||||||||||||    
T  10377906 tgcgagcaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcgccgaaatacccatgct 10377812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 25190914 - 25191011
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    ||||||| | ||||||||||||  |||||||||||||||  |||||| ||||||| ||| |||   |||||||||||||| |||||||||||| ||||    
T  25190914 gctaaaatcgtaaaaggtgaatctgcgaacaaactcacagcacccaagttaatagcataaaatagaaaaatgcctacaaataatatgataaaacctaa 25191011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 30568170 - 30568267
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| ||| || | ||||||||||||||| || ||||||||| ||||    
T  30568170 gctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcataaaacggcaaaatgcctacaaataacatgataaaacctaa 30568267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 396
Target Start/End: Original strand, 9637259 - 9637355
Alignment:
Q  303 ctaaaaacttaaaaggtgaa--tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    |||||||| |||| ||||||  | |||||||||||| |  |||||| ||||||| |||||| ||||||||||||| ||| |||||||||||| ||||    
T  9637259 ctaaaaacgtaaatggtgaaactacgaacaaactcataacacccaagttaatagcatacaacgacaaaatgcctaaaaataatatgataaaacctaa 9637355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 20553138 - 20553207
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||| |||||| | ||||||||||||||| |||||||||||| |||| |||||  ||||| ||||||    
T  20553138 ttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagtcaccgaaatactcatgct 20553207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 393
Target Start/End: Original strand, 40211176 - 40211245
Alignment:
Q  325 cgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatc 393  Q
    ||||||||||||||| ||||| |||||||| |||||| | || ||||| |||||| ||||||||||||||    
T  40211176 cgaacaaactcacatcacccagattaatagcatacaacggcataatgcttacaaataatatgataaaatc 40211245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 366 - 410
Target Start/End: Original strand, 8443427 - 8443471
Alignment:
Q  366 aaatgcctacaaacaatatgataaaatctaaatcaccataatacc 410  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||||    
T  8443427 aaatgtctacaaataatatgatcaaatctaaatcaccataatacc 8443471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 16247077 - 16247189
Alignment:
Q  305 aaaaacttaaaaggtgaatgcgaacaaactcac-atacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacca 403  Q
    |||||| |||| |||||||  ||||||||| || | |||| | ||||||| |||||| | |||||||||| |||| |||||||| |||||||| ||| |     
T  16247077 aaaaacgtaaagggtgaatatgaacaaacttactacacccgagttaatagcatacaacggcaaaatgccttcaaataatatgatcaaatctaagtcagcg 16247176  T
Q  404 taatacccatgct 416  Q
     ||||||||||||    
T  16247177 aaatacccatgct 16247189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 41684556 - 41684505
Alignment:
Q  365 aaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||| ||||||||||||||||| ||| |  ||||||||||||    
T  41684556 aaaatgcctacaaataatatgataaaatctaagtcatcgaaatacccatgct 41684505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 20559641 - 20559710
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||| |||||| | ||||||||| ||||| |||||||||||| |||| |||||  ||||| ||||||    
T  20559641 ttaatagcatacaacggcaaaatgcccacaaataatatgataaaacctaagtcaccgaaatactcatgct 20559710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 20571203 - 20571272
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||| |||||| | ||||||||| ||||| |||||||||||| |||| |||||  ||||| ||||||    
T  20571203 ttaatagcatacaacggcaaaatgcccacaaataatatgataaaacctaagtcaccgaaatactcatgct 20571272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 24186558 - 24186627
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||| | | ||||||||||| ||| ||||||||||||| ||| ||||   ||||||||||||    
T  24186558 ttaatagtatacgacggcaaaatgcctataaataatatgataaaatttaagtcactgaaatacccatgct 24186627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 242 - 416
Target Start/End: Complemental strand, 47133205 - 47133027
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcaca 338  Q
    |||||||||| |||||| |||||| | |||||||| |||| ||||||||| ||||||| | ||||||||| |||| | | |||  |||||||||||||||    
T  47133205 ttgacaaaaacaaaacgatattcattcattcaaattgatagaatacatcagaatcaacatcgctaaaaacgtaaaggataaatctgcgaacaaactcaca 47133106  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
      | |||| ||||||| ||| || | ||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||    
T  47133105 acatccaagttaatagcatataacggcaaaatgcctacaaaaaatatgatgaaatctaaatcaccagaatactcatgct 47133027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 260 - 409
Target Start/End: Complemental strand, 19061193 - 19061040
Alignment:
Q  260 tattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaatg--cgaacaaactcacat-acccaaattaatagta 355  Q
    |||||| | |||||||| |||||||||||||| ||||||  | ||||||||| |||||| ||||||  ||||||||||||||  | |||| ||||||| |    
T  19061193 tattcattcattcaaattgatataatacatcagaatcaagatcgctaaaaacataaaagatgaatgtgcgaacaaactcacaacatccaagttaatagca 19061094  T
Q  356 tacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    ||||| | ||||||||||||||| ||||||||| |||||||||||||| |||||    
T  19061093 tacaacggcaaaatgcctacaaataatatgatataatctaaatcaccagaatac 19061040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 242 - 408
Target Start/End: Complemental strand, 24583448 - 24583278
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcaca 338  Q
    |||| ||||| |||| | |||||| | |||||||| |||| ||||||||| ||||||  | ||||||||  |||| | |||||  |||||||||||||||    
T  24583448 ttgataaaaacaaaatgatattcattcattcaaatcgatagaatacatcagaatcaagatcgctaaaaatgtaaaggatgaatctgcgaacaaactcaca 24583349  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    | |||||| ||||||| |||||| | ||||||||||||||| ||||||||| |||||||||||||| ||||    
T  24583348 tcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgatataatctaaatcaccagaata 24583278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 322 - 416
Target Start/End: Complemental strand, 48750404 - 48750309
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  48750404 atgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgct 48750309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 244 - 416
Target Start/End: Complemental strand, 12635470 - 12635294
Alignment:
Q  244 gacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaatg--cgaacaaactcacat- 339  Q
    |||||||| |||||| |||||| | ||| |||| |||| ||| ||||| ||||||| | ||||||||| ||||||||||||   |||||||||| |||      
T  12635470 gacaaaaacaaaacgatattcattcatttaaattgatagaatgcatcagaatcaacatcgctaaaaacataaaaggtgaatctccgaacaaactaacaac 12635371  T
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    | |||| ||||||| |||||| ||||||||||||  ||| ||||||||||||| |||||| ||| ||||||||||||    
T  12635370 atccaagttaatagcatacaacgacaaaatgccttaaaaaaatatgataaaatataaatcgccagaatacccatgct 12635294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 416
Target Start/End: Complemental strand, 5984055 - 5983960
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||||||| |||||| ||||||| |||||| ||||||||||||||||| ||||||||||||  ||| |||||  ||||||||||||    
T  5984055 atgcgaacaaactcacatcacccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaacataagtcaccgaaatacccatgct 5983960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 408
Target Start/End: Complemental strand, 24583247 - 24583082
Alignment:
Q  247 aaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acc 342  Q
    ||||| |||| | |||||| | |||||||| |||| ||||||||| ||||||  | ||||||||| |||| | |||||  | |||||||||||||| |||    
T  24583247 aaaaacaaaatgatattcattcattcaaatcgatagaatacatcagaatcaagatcgctaaaaacgtaaaggatgaatctgtgaacaaactcacatcacc 24583148  T
Q  343 caaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    ||| ||||||  |||||| | ||||||||||||||| ||||||||| |||||||||||||| ||||    
T  24583147 caagttaatatcatacaacggcaaaatgcctacaaataatatgatataatctaaatcaccagaata 24583082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 323 - 408
Target Start/End: Complemental strand, 34529292 - 34529206
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    ||||||||||||||||| |||||| ||||||||||||||  | |||||||||||||| ||| ||||||||| |||||||||||||||    
T  34529292 tgcgaacaaactcacatcacccaagttaatagtatacaacaaaaaaatgcctacaaataatgtgataaaatttaaatcaccataata 34529206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 302 - 416
Target Start/End: Complemental strand, 45415799 - 45415682
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||||||||||  ||||||||||||| ||||||| | ||||||||||||||| |||||||||||| |||| |    
T  45415799 gctaaaaacgtaaagggtgaatatgcgaacaaactcacaacacccaaattaatattatacaacggcaaaatgcctacaaataatatgataaaacctaagt 45415700  T
Q  399 caccataatacccatgct 416  Q
    ||||  |||||| |||||    
T  45415699 caccgaaatacctatgct 45415682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 304 - 416
Target Start/End: Complemental strand, 31317975 - 31317860
Alignment:
Q  304 taaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    ||||||| |||| |||||||  |||||||||||||||| |||||| ||||||| || ||| || |||||||||||||| ||||||||||| |||||||||    
T  31317975 taaaaacgtaaagggtgaatttgcgaacaaactcacatcacccaagttaataggatgcaacgataaaatgcctacaaataatatgataaattctaaatca 31317876  T
Q  401 ccataatacccatgct 416  Q
    ||  |||| |||||||    
T  31317875 ccgaaatatccatgct 31317860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 416
Target Start/End: Complemental strand, 14872858 - 14872763
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||||||  | |||| ||||||| |||||| | ||||||||||||||| |||||||||||| |||| |||||| ||||||||||||    
T  14872858 atgcgaacaaactcacagcatccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagtcaccaaaatacccatgct 14872763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 34412966 - 34413060
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||  ||||||   ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  34412966 tgcgaacaaactcacaacacccaagttaataacatacaaccgcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgct 34413060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 401
Target Start/End: Complemental strand, 44543573 - 44543411
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcaca 338  Q
    |||||||||| |||| | |||||| | ||||||||  ||| ||||||||| ||||||  | ||||||||| |||| | |||||  |||||||||||||||    
T  44543573 ttgacaaaaacaaaatgatattca-tcattcaaatcaatagaatacatcagaatcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 44543475  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
      |||||| ||||||| ||| || | ||||||||||||||| ||||||||| ||||||||||||    
T  44543474 gcacccaagttaatagcataaaacggcaaaatgcctacaaataatatgatataatctaaatcac 44543411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 305 - 416
Target Start/End: Complemental strand, 16162066 - 16161952
Alignment:
Q  305 aaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
    |||||| |||| |||||||  |||||||||||||||  ||| || ||||||| || | | | ||||||||||||||| |||||||||||||||||||||     
T  16162066 aaaaacgtaaagggtgaatctgcgaacaaactcacaacacctaagttaatagcattccacggcaaaatgcctacaaataatatgataaaatctaaatcag 16161967  T
Q  402 cataatacccatgct 416  Q
    || ||||||||||||    
T  16161966 cagaatacccatgct 16161952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 271 - 409
Target Start/End: Complemental strand, 49627186 - 49627044
Alignment:
Q  271 tcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaa 366  Q
    |||||| |||| ||||||||| ||||||  | ||||||||| |||| | |||||  |||||||||||||||  |||||||||||||| |||||| | |||    
T  49627186 tcaaatcgatagaatacatcagaatcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacacccaaattaatagcatacaacggcaa 49627087  T
Q  367 aatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    |||| ||||||| || |||||| ||||||||||| || |||||    
T  49627086 aatgtctacaaataagatgatataatctaaatcatcagaatac 49627044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 417
Target Start/End: Complemental strand, 15492480 - 15492410
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgctc 417  Q
    ||||||| |||||| |  ||||||| |||||| ||||||||||||||||||||||||||||| ||||||||    
T  15492480 ttaatagcatacaacggtaaaatgcatacaaataatatgataaaatctaaatcaccataatatccatgctc 15492410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 32679015 - 32679109
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  | |||| ||||| | ||| || | ||||||||||||||| |||||||| ||||||||||||||||||||| ||||||    
T  32679015 tgcgaacaaactcacaacatccaagttaatggcatataacggcaaaatgcctacaaaaaatatgatgaaatctaaatcaccataatactcatgct 32679109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 35484265 - 35484359
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||| |||||| | |||||||| |||||| |||||||||||| | ||||||||  ||||||||||||    
T  35484265 tgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcttacaaataatatgataaaaccgaaatcaccgaaatacccatgct 35484359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 411
Target Start/End: Complemental strand, 14489474 - 14489401
Alignment:
Q  338 atacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataataccc 411  Q
    |||||||| ||||||  ||||||  ||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  14489474 atacccaagttaataacatacaacaacaaaatacctacaaataatatgataaaatctaaatcaccagaataccc 14489401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 414
Target Start/End: Original strand, 11462333 - 11462448
Alignment:
Q  302 gctaaaaacttaaaaggtgaatg--cgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||   ||||||||||||||  |||||| ||||||| |||||| |||||||| |||||||| ||||||||||||  ||| |    
T  11462333 gctaaaaacgtaaatggtgaatctacgaacaaactcacagcacccaagttaatagcatacaacgacaaaattcctacaaataatatgataaaacttaagt 11462432  T
Q  399 caccataatacccatg 414  Q
    ||||  ||||||||||    
T  11462433 caccgaaatacccatg 11462448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 402
Target Start/End: Original strand, 36775584 - 36775664
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    ||||||||||||||||  | |||| ||||||| |||||| | ||||||||||||||| |||||||| ||||||||||||||    
T  36775584 tgcgaacaaactcacaacatccaagttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatcacc 36775664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 401
Target Start/End: Original strand, 34878129 - 34878231
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| ||||||||||||  | |||||||||||||  |||||| ||||||| ||| || | ||||||||||||||| |||||||||||| |||| |    
T  34878129 gctaaaaacgtaaaaggtgaatctgtgaacaaactcacaacacccaagttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaagt 34878228  T
Q  399 cac 401  Q
    |||    
T  34878229 cac 34878231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 37720066 - 37720117
Alignment:
Q  365 aaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  37720066 aaaatgcctacaaataatatgataaaatctaaataaccagaatacccatgct 37720117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 396
Target Start/End: Complemental strand, 44915858 - 44915783
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    |||||||||||||||||| |||||| |  |||| |||||| | ||||||||||||||| |||||||||||||||||    
T  44915858 atgcgaacaaactcacatcacccaagtcgatagcatacaacggcaaaatgcctacaaataatatgataaaatctaa 44915783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 347 - 417
Target Start/End: Complemental strand, 9341919 - 9341849
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgctc 417  Q
    ||||||||||||||  ||||||| |||||||| ||||||||||||||||| |||||| ||||  |||||||    
T  9341919 ttaatagtatacaacaacaaaatacctacaaataatatgataaaatctaagtcaccagaatatacatgctc 9341849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 10776312 - 10776429
Alignment:
Q  302 gctaaaaacttaaaaggtgaa--tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| ||||||  ||||||||||||||||  |||||| ||||||| ||||||   ||||||||||||||| || ||||||||| |||| |    
T  10776312 gctaaaaacgtaaagggtgaaattgcgaacaaactcacagcacccaagttaatagaatacaacagcaaaatgcctacaaataaaatgataaaacctaagt 10776411  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||| ||||||    
T  10776412 caccgaaatactcatgct 10776429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 21687619 - 21687522
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    |||| |||| ||||||||||||  || ||||||||||||  |||||||||||||| ||| || || |||||||||||||| |||||||||||| ||||    
T  21687619 gctagaaacgtaaaaggtgaatctgctaacaaactcacaacacccaaattaatagcataaaacgagaaaatgcctacaaataatatgataaaacctaa 21687522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 31984379 - 31984285
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||| |||||  |||||| ||||||| |||||| |||||||||| || ||| |||||||||||| |||| |||||  ||||||||||||    
T  31984379 tgcgaacaaagtcacaacacccaagttaatagcatacaacgacaaaatgcttaaaaataatatgataaaacctaagtcaccgaaatacccatgct 31984285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 323 - 391
Target Start/End: Original strand, 21947492 - 21947561
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    ||||||||||||||||| |||||| ||||||  |||||| | ||||||||||||||| ||||||||||||    
T  21947492 tgcgaacaaactcacatcacccaagttaataaaatacaacggcaaaatgcctacaaataatatgataaaa 21947561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 416
Target Start/End: Original strand, 40163313 - 40163407
Alignment:
Q  322 atgcgaacaaactcacatacccaaattaatagtatacaatgacaaaatgcctacaaacaat-atgat-aaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||||||  ||||| ||||||| |||| ||| ||||||||||| |||  || ||||| |||||||||||||||||| ||||||||||    
T  40163313 atgcgaacaaactcaca--cccaagttaatagcatacgatggcaaaatgcctaaaaaatattatgatgaaaatctaaatcaccatattacccatgct 40163407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 402
Target Start/End: Original strand, 7836670 - 7836750
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    ||||||||||||||||  |||||| ||||||| ||| || | ||||||||||||||| |||||||||||| |||| |||||    
T  7836670 tgcgaacaaactcacagcacccaagttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaagtcacc 7836750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 402
Target Start/End: Original strand, 51373736 - 51373812
Alignment:
Q  327 aacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    ||||||||||||  |||||| ||||||| |||| | ||||||||||||||||| ||||||||||||| ||| |||||    
T  51373736 aacaaactcacaacacccaagttaatagcatacgacgacaaaatgcctacaaataatatgataaaatataagtcacc 51373812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 401
Target Start/End: Original strand, 13144686 - 13144765
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
    ||||||||||||||||  | |||| ||||||| ||| |||| ||||||||||||||| | ||||||||||||||| ||||    
T  13144686 tgcgaacaaactcacaacatccaagttaatagcataaaatggcaaaatgcctacaaatattatgataaaatctaagtcac 13144765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 416
Target Start/End: Complemental strand, 32395300 - 32395122
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaactagc--taaaaacttaaaaggtgaat-gcgaacaaactcaca 338  Q
    |||||||||| |||||| ||||||   |||||||| |||| | |||||||||  |||  | |  ||||||| |||| ||||||| ||||||||||| |||    
T  32395300 ttgacaaaaacaaaacgatattcatccattcaaatcgatagagtacatcaaatacaaacaccgttaaaaacgtaaagggtgaatcgcgaacaaacttaca 32395201  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
      |||||| ||||||| |||||  | ||||||||||| ||| ||||||||||||  ||| |||||  ||||||||||||    
T  32395200 gcacccaagttaatagcatacagcggcaaaatgcctataaataatatgataaaacttaagtcaccgaaatacccatgct 32395122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 393
Target Start/End: Original strand, 32873738 - 32873809
Alignment:
Q  323 tgcgaacaaactcaca-tacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatc 393  Q
    |||||||||| ||||| | || |||||||||| |||||||||||| ||| ||||||| ||||||||||||||    
T  32873738 tgcgaacaaattcacaatgccaaaattaatagcatacaatgacaatatgtctacaaataatatgataaaatc 32873809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 7337537 - 7337631
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  | |||| ||||||| || |||   ||||||||||||||| |||||||||||| | ||||||||  ||||||||||||    
T  7337537 tgcgaacaaactcacaacagccaagttaatagcatgcaacagcaaaatgcctacaaataatatgataaaaccaaaatcaccgaaatacccatgct 7337631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 27580002 - 27580096
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||| ||| |||| |||||||| ||  || ||||||||||||||||| |||||  ||||| ||||||    
T  27580002 tgcgaacaaactcacaacacccaagttaatagcataaaatggcaaaatgcttatgaataatatgataaaatctaagtcaccgaaatactcatgct 27580096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 402
Target Start/End: Complemental strand, 50377626 - 50377461
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaa-atcaac-tagctaaaaacttaaaaggtgaa--tgcgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| ||||  |||||||| | || ||| | ||||||||| |||| | ||||  ||||||||||||| |    
T  50377626 ttgacaaaaacaaaacgatattcattcattcaaattgataagatacatcagatataaacatcgctaaaaacgtaaaggatgaaattgcgaacaaactctc 50377527  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    |  |||||| ||||||  |||| | |  |||||||||||| ||||||||||||||||||| |||||    
T  50377526 agcacccaagttaataacatacgacggaaaaatgcctacagacaatatgataaaatctaagtcacc 50377461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 400
Target Start/End: Complemental strand, 3228486 - 3228409
Alignment:
Q  324 gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    |||||||||| ||||| |||||| ||||||  ||| || | ||||||||||||||| |||||||||||| ||||||||    
T  3228486 gcgaacaaacacacatcacccaagttaataacatataacggcaaaatgcctacaaataatatgataaaacctaaatca 3228409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 396
Target Start/End: Complemental strand, 45789741 - 45789685
Alignment:
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    |||||| ||||||| ||||||||||||||| |||||||| ||||| ||||| |||||    
T  45789741 acccaagttaatagcatacaatgacaaaattcctacaaataatataataaattctaa 45789685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 401
Target Start/End: Original strand, 6217717 - 6217776
Alignment:
Q  342 ccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
    |||| ||||||| |||||| |  ||||| |||||||| ||||||||||||||||||||||    
T  6217717 ccaagttaatagcatacaacggtaaaatacctacaaataatatgataaaatctaaatcac 6217776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 401
Target Start/End: Complemental strand, 16989585 - 16989510
Alignment:
Q  327 aacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
    ||||||||||||  |||||| ||||||| ||| || | ||||||||||||||| |||||||||||| |||| ||||    
T  16989585 aacaaactcacagcacccaagttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaagtcac 16989510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 49648752 - 49648819
Alignment:
Q  326 gaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaat 392  Q
    |||||||||||||| |||||||||||||  ||||||| ||||||||  |||||| ||||| |||||||    
T  49648752 gaacaaactcacatcacccaaattaataacatacaataacaaaatgtttacaaataatataataaaat 49648819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 395
Target Start/End: Original strand, 15431540 - 15431613
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatcta 395  Q
    ||||||||||||||||  | |||| | ||||| |||||| || |||||| ||||||| ||||||||||||||||    
T  15431540 tgcgaacaaactcacaacatccaagtgaatagcatacaacgataaaatgtctacaaataatatgataaaatcta 15431613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 408
Target Start/End: Complemental strand, 25564215 - 25564130
Alignment:
Q  324 gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    ||||||||||||| |  |||||| ||||||  ||||||  |||||||  ||||||||||||| ||||||| |||||||||| ||||    
T  25564215 gcgaacaaactcataggacccaagttaataacatacaacaacaaaatatctacaaacaatataataaaatataaatcaccagaata 25564130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 391
Target Start/End: Complemental strand, 31919187 - 31919138
Alignment:
Q  342 ccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    |||| ||||||| |||||| ||||||||| ||||||| ||||||||||||    
T  31919187 ccaagttaatagcatacaacgacaaaatgtctacaaataatatgataaaa 31919138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 409
Target Start/End: Complemental strand, 41994607 - 41994558
Alignment:
Q  360 atgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    ||||||||||  ||||||| || ||||||||||||||||||||| |||||    
T  41994607 atgacaaaattgctacaaataaaatgataaaatctaaatcaccagaatac 41994558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 414
Target Start/End: Original strand, 13075573 - 13075621
Alignment:
Q  366 aaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    |||||| |||||| |||||||||||||||||||||| | ||||| ||||    
T  13075573 aaatgcttacaaataatatgataaaatctaaatcactagaatactcatg 13075621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 376
Target Start/End: Complemental strand, 27456723 - 27456648
Alignment:
Q  304 taaaaacttaaaaggtgaat--gcgaacaaactcac-atacccaaattaatagtatacaatgacaaaatgcctaca 376  Q
    ||||||| |||||| |||||  |||||||||||||| | |||||| ||||||| |||||| ||||||||| |||||    
T  27456723 taaaaacgtaaaagatgaatttgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgtctaca 27456648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 416
Target Start/End: Complemental strand, 43412550 - 43412498
Alignment:
Q  364 caaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||| ||| |||| |||||||||||||||| ||||||| ||||| ||||||    
T  43412550 caaaatacctgcaaataatatgataaaatctagatcaccaaaatacgcatgct 43412498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 45393329 - 45393285
Alignment:
Q  348 taatagtatacaatgacaaaatgcctacaaacaatatgataaaat 392  Q
    |||||||||||||||| |||||| ||| ||| |||||||||||||    
T  45393329 taatagtatacaatgataaaatgactataaataatatgataaaat 45393285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 242 - 402
Target Start/End: Complemental strand, 37994593 - 37994429
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcaca 338  Q
    |||||||||| |||||| |||||| | |||||||| |||| ||||||||| ||||||| |  |||||| | |||||| |||||  |||||||||||||||    
T  37994593 ttgacaaaaacaaaacgatattcattcattcaaattgatagaatacatcagaatcaacatccctaaaatcgtaaaagatgaatctgcgaacaaactcaca 37994494  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
      |||||| ||||||| ||| ||   ||||||||||||||| |||||||||||||||||||||||    
T  37994493 acacccaagttaatagcatataacagcaaaatgcctacaaataatatgataaaatctaaatcacc 37994429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 10237091 - 10237185
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||| |||||| ||||||||||||||||| |||||||| |||||||||||| || ||||||||||||    
T  10237091 tgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctacaaataatatgatgaaatctaaatcatcagaatacccatgct 10237185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 241 - 416
Target Start/End: Complemental strand, 7646789 - 7646609
Alignment:
Q  241 gttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaa-atcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactca 336  Q
    ||||||||||| |||||| |||||| | |||||||| |||| | ||||||||| || ||  | ||||||||| ||||||||||||  |||||||||||||    
T  7646789 gttgacaaaaacaaaacgatattcattcattcaaatcgataaagtacatcaaatataaagatcgctaaaaacgtaaaaggtgaatctgcgaacaaactca 7646690  T
Q  337 cat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||  |||||| ||||||| |||||| | ||||||||||||||| ||||||||||||  ||| |||||  ||||| ||||||    
T  7646689 caacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatactcatgct 7646609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 242 - 416
Target Start/End: Original strand, 37876396 - 37876575
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | |||||||||  |||  |  ||||||||| |||| |||||||  |||||||||||| |    
T  37876396 ttgacaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacataaatggtgaatctgcgaacaaactcgc 37876495  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    || |||||| ||||||| |||| | | ||||||||||||||| ||||||||||||| ||| |||||  ||||||||||||    
T  37876496 atcacccaagttaatagcatacgacggcaaaatgcctacaaataatatgataaaatttaagtcaccgaaatacccatgct 37876575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 409
Target Start/End: Original strand, 17248943 - 17249109
Alignment:
Q  247 aaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acc 342  Q
    ||||| |||| | |||||| | |||||||| |||| ||||||||| ||||||  | ||||||||| |||| | |||||  |||||||||||||||  |||    
T  17248943 aaaaataaaatgatattcattcattcaaatcgataaaatacatcagaatcaagatcgctaaaaacgtaaatgatgaatctgcgaacaaactcacagcacc 17249042  T
Q  343 caaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    ||| ||||||| |||||| | ||||||| ||||||| ||||||||| |||||||||||||| |||||    
T  17249043 caagttaatagcatacaacggcaaaatgtctacaaataatatgatataatctaaatcaccagaatac 17249109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 327 - 416
Target Start/End: Complemental strand, 1421897 - 1421807
Alignment:
Q  327 aacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||  |||||| ||||||| |||||| ||||||||||||||||| |||||||||||| ||||||||||  ||||||||||||    
T  1421897 aacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaacctaaatcaccgaaatacccatgct 1421807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 416
Target Start/End: Complemental strand, 4779063 - 4778884
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||||||||| |||||  |||||| | |||||||| |||| | |||||||||  |||  |  ||||||||| |||| |||||||  ||||||||||||||    
T  4779063 ttgacaaaaacaaaactatattcattcattcaaatcgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcac 4778964  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |  |||||||||||||  |||||| | ||||||||||||||| ||||||||||||  ||| |||||  ||||||||||||    
T  4778963 agcacccaaattaataacatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgct 4778884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 242 - 416
Target Start/End: Complemental strand, 10929974 - 10929796
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcaca 338  Q
    |||||||||| |||| | |||||| |  ||||||| |||| |||| |||||||||||  | ||||||||| |||| |||||||  || ||||||||||||    
T  10929974 ttgacaaaaacaaaaagatattcattcgttcaaattgatagaatatatcaaaatcaagatcgctaaaaacataaagggtgaatatgcaaacaaactcaca 10929875  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
      | |||| ||||||| || |||  |||||||||||| ||| ||||||||||||| |||||||||| ||||| ||||||    
T  10929874 gcatccaagttaatagcattcaacaacaaaatgcctataaataatatgataaaatttaaatcaccagaatacacatgct 10929796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 245 - 409
Target Start/End: Complemental strand, 24461746 - 24461581
Alignment:
Q  245 acaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaa--tgcgaacaaactcacatac 341  Q
    ||||||| |||||| |||||| | |||||||| |||| |||||||   ||||||| | ||||||||| |||| | ||||  ||||||||||||||||       
T  24461746 acaaaaataaaacgatattcattcattcaaattgatagaatacat---aatcaacatcgctaaaaacgtaaaggatgaacctgcgaacaaactcacaaca 24461650  T
Q  342 ccaaa-ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    ||||| ||||||| ||| || |||||||| |||||||| |||||||| ||||||||||||||| |||||    
T  24461649 ccaaagttaatagcatataacgacaaaatacctacaaaaaatatgatgaaatctaaatcaccaaaatac 24461581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 340 - 409
Target Start/End: Original strand, 6358774 - 6358843
Alignment:
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    |||||| ||||||| |||||| |||||||| | |||||| ||||||||||||||||||||||||||||||    
T  6358774 acccaagttaatagcatacaacgacaaaatacgtacaaataatatgataaaatctaaatcaccataatac 6358843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 242 - 402
Target Start/End: Complemental strand, 18763778 - 18763613
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | ||||||||  ||| | ||||||| |  ||| ||  ||||||||| |||| |||||||  ||||||||||||||    
T  18763778 ttgacaaaaacaaaacgatattcattcattcaaatcaatagagtacatcagatacaaatatcgctaaaaacgtaaagggtgaatctgcgaacaaactcac 18763679  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    |  |||||| ||||||| ||| || | ||||||||||||||| |||||||||||| |||| |||||    
T  18763678 aacacccaagttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaagtcacc 18763613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 3309170 - 3309076
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||| |||||||||  |||||| ||||||| |||||| | ||||||| ||||||| |||||||| |||| |||||||||| ||||||||||||    
T  3309170 tgcgaataaactcacagcacccaagttaatagcatacaacggcaaaatgactacaaataatatgatgaaatataaatcaccagaatacccatgct 3309076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 7677725 - 7677842
Alignment:
Q  302 gctaaaaacttaaaaggtgaa--tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||||||||||  ||| ||||||||||||  |||||| ||||||| |||||| | ||||||||||| ||| |||||||||||| |||| |    
T  7677725 gctaaaaacgtaaaaggtgaacttgcaaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctaaaaataatatgataaaacctaatt 7677824  T
Q  399 caccataatacccatgct 416  Q
    |||   ||||||||||||    
T  7677825 cacggaaatacccatgct 7677842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 402
Target Start/End: Original strand, 28533808 - 28533909
Alignment:
Q  304 taaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    ||||||| ||||||||| ||  |||||||||||||||  || ||| ||||||| |||||| |||||||| |||||||| |||||||||||||| ||||||    
T  28533808 taaaaacgtaaaaggtggatctgcgaacaaactcacaacactcaagttaatagcatacaacgacaaaatacctacaaataatatgataaaatccaaatca 28533907  T
Q  401 cc 402  Q
    ||    
T  28533908 cc 28533909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 408
Target Start/End: Original strand, 29574523 - 29574589
Alignment:
Q  342 ccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    |||||||||||| ||| |||||||||||| ||||||| |||||||| |||||||||||| |||||||    
T  29574523 ccaaattaatagcatataatgacaaaatgactacaaaaaatatgatgaaatctaaatcatcataata 29574589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 416
Target Start/End: Original strand, 4904022 - 4904114
Alignment:
Q  325 cgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||  | |||| ||||||| |||||| ||||||||| ||||||| ||||||||||||||||| |||||  |||| |||||||    
T  4904022 cgaacaaactcacaacatccaagttaatagcatacaacgacaaaatgtctacaaataatatgataaaatctaagtcaccgaaatatccatgct 4904114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 414
Target Start/End: Complemental strand, 14955754 - 14955662
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    ||||||||||||||||  ||| || ||||||  ||||||||| |||||| ||||||| ||||||||||||||||||||| || ||||| ||||    
T  14955754 tgcgaacaaactcacaacacctaagttaataacatacaatgataaaatgtctacaaataatatgataaaatctaaatcatcagaatacacatg 14955662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 25508943 - 25509035
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    ||||||||||||||||| |||||| ||||||  |||||| | ||||||||||||||| |||| |||||||||||| ||| |  ||||||||||    
T  25508943 tgcgaacaaactcacatcacccaagttaataacatacaacggcaaaatgcctacaaataatacgataaaatctaagtcatcgaaatacccatg 25509035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 305 - 396
Target Start/End: Original strand, 12554036 - 12554130
Alignment:
Q  305 aaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    |||||| |||| |||||||  |||||||||||||||  |||||| ||||||  |||||| ||||||||||||||||| |||||||||||| ||||    
T  12554036 aaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatatcatacaacgacaaaatgcctacaaataatatgataaaacctaa 12554130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 402
Target Start/End: Complemental strand, 33924015 - 33923850
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | ||||||| |  |||  |  ||||||||  ||||||||||||  ||||||||||||||    
T  33924015 ttgacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaaaaatcgctaaaaaggtaaaaggtgaatatgcgaacaaactcac 33923916  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    |  |||||| ||||||| ||| || ||||||| |||| |||| |||||||||||| |||| |||||    
T  33923915 agcacccaagttaatagcataaaacgacaaaacgcctgcaaataatatgataaaacctaagtcacc 33923850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 16376164 - 16376070
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||| | |||| ||||| | ||||||   ||||||| ||||||| ||||||||||||| ||||||| |||||||| ||||||    
T  16376164 tgcgaacaaactcacatcatccaagttaatcgcatacaacaccaaaatgactacaaataatatgataaaatttaaatcatcataatacacatgct 16376070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 31210524 - 31210581
Alignment:
Q  364 caaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgctctctg 421  Q
    ||||||||||||||| |||||||||||| ||||||||||  |||||||||||| ||||    
T  31210524 caaaatgcctacaaataatatgataaaacctaaatcaccgaaatacccatgctttctg 31210581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 401
Target Start/End: Complemental strand, 31788765 - 31788602
Alignment:
Q  243 tgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcaca 338  Q
    ||||||||| |||||| |||||| | |||||||| |||| | ||||||| |  |||  |  ||||||||| |||| |||||||  |||||||||||||||    
T  31788765 tgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 31788666  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
      | |||| ||||||| |||||| | ||||||||||||||| |||||| ||||| |||| ||||    
T  31788665 gcatccaagttaatagcatacaacggcaaaatgcctacaaataatatgttaaaacctaagtcac 31788602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 402
Target Start/End: Original strand, 33585609 - 33585690
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    |||||||||||||||||  |||||| ||||||| |||||| | |||||||| |||||| ||||||||||||  |||||||||    
T  33585609 atgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcatacaaataatatgataaaacttaaatcacc 33585690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 391
Target Start/End: Complemental strand, 4100583 - 4100492
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacatacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    ||||||||| |||| |||||||  |||||||||||||||   |||| ||||||  |||||| | ||||||||||||||| ||||||||||||    
T  4100583 gctaaaaacgtaaagggtgaatctgcgaacaaactcacaacaccaagttaatatcatacaacggcaaaatgcctacaaataatatgataaaa 4100492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 416
Target Start/End: Original strand, 23933512 - 23933588
Alignment:
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||| |||||||  ||||| | |||||| |||||||| |||||||||||||||||||||||| | || |||||||    
T  23933512 acccaagttaatagcttacaacggcaaaattcctacaaataatatgataaaatctaaatcaccagattatccatgct 23933588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 391
Target Start/End: Original strand, 27097260 - 27097351
Alignment:
Q  303 ctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    |||||||| |||| |||||||  || ||||||||||||  |||||| |||||||||||||| | |||||| |||||||| ||||||||||||    
T  27097260 ctaaaaacgtaaagggtgaatctgcaaacaaactcacaacacccaagttaatagtatacaacggcaaaattcctacaaataatatgataaaa 27097351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 378
Target Start/End: Complemental strand, 35220576 - 35220497
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaa 378  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| |||||| |||||||||||||||||    
T  35220576 gctaaaaacgtaaagggtgaatatgcgaacaaactcacagcacccaagttaatagcatacaacgacaaaatgcctacaaa 35220497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 41327965 - 41327898
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgata 388  Q
    ||||||| |||||||||| ||| || ||||||| |||||||| ||||||||||||||| |||||||||    
T  41327965 atgcgaataaactcacatcacctaagttaatagcatacaatgccaaaatgcctacaaataatatgata 41327898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 401
Target Start/End: Original strand, 5427659 - 5427823
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | ||||||| |  |||  |  ||||||| | |||| |||||||  ||||||||||||||    
T  5427659 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaagcgtaaagggtgaatctgcgaacaaactcac 5427758  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
    |  |||||| ||||||| |||||| || ||||||| | |||| |||||||||||| |||| ||||    
T  5427759 agcacccaagttaatagcatacaacgataaaatgcttgcaaataatatgataaaacctaagtcac 5427823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 412
Target Start/End: Complemental strand, 38445391 - 38445301
Alignment:
Q  323 tgcgaacaaactcacatacccaaa-ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataataccca 412  Q
    ||||||||||||||||   ||||| ||||||  |||||||| ||||||||||||||| ||||||||||||  ||| |||||  ||||||||    
T  38445391 tgcgaacaaactcacagcaccaaagttaataacatacaatggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaataccca 38445301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 409
Target Start/End: Complemental strand, 21612444 - 21612376
Alignment:
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    |||||| ||||||| |||||| |||||| | | |||||||||||||||||||| |||||||||| |||||    
T  21612444 acccaagttaatagcatacaacgacaaatttc-tacaaacaatatgataaaatataaatcaccagaatac 21612376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 402
Target Start/End: Complemental strand, 36692096 - 36692019
Alignment:
Q  326 gaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    |||||||||||||  | |||| ||||||| ||| || | ||||||||||||||| |||||||||||| ||||||||||    
T  36692096 gaacaaactcacaacaaccaagttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaaatcacc 36692019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 378
Target Start/End: Original strand, 19062199 - 19062278
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaa 378  Q
    ||||||||| |||| |||||||  |||| ||||||||||| |||||| ||||||| |||||| | |||||||||||||||    
T  19062199 gctaaaaacgtaaagggtgaatctgcgagcaaactcacatcacccaagttaatagcatacaacggcaaaatgcctacaaa 19062278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 29279422 - 29279525
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacatacccaaa-ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||||||||||   ||| | ||||||| ||| || | ||||||||||||||| ||||||||||||| ||| |    
T  29279422 gctaaaaacgtaaatggtgaatatgcgaacaaactcacaacaccatagttaatagcataaaacggcaaaatgcctacaaataatatgataaaatttaagt 29279521  T
Q  399 cacc 402  Q
    ||||    
T  29279522 cacc 29279525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 416
Target Start/End: Original strand, 9169136 - 9169227
Alignment:
Q  326 gaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||  | |||| ||||||| |||||| | ||||||||||||||| |||||||||| |  ||| |||||  ||||||||||||    
T  9169136 gaacaaactcacagcatccaagttaatagcatacaacggcaaaatgcctacaaataatatgataagacttaagtcaccgaaatacccatgct 9169227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 402
Target Start/End: Original strand, 17994638 - 17994685
Alignment:
Q  355 atacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    |||||||| ||||||||||||||| ||||||||||||| ||| |||||    
T  17994638 atacaatggcaaaatgcctacaaataatatgataaaatttaagtcacc 17994685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 396
Target Start/End: Original strand, 18107624 - 18107699
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    |||||||||||||||||  || ||| |||||| |||| || ||||||||||||||||| |||||||| || |||||    
T  18107624 atgcgaacaaactcacaacacgcaagttaataatataaaacgacaaaatgcctacaaataatatgattaattctaa 18107699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 416
Target Start/End: Complemental strand, 14416353 - 14416292
Alignment:
Q  355 atacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||| | |||||||  ||||||||||||||||  ||||  |||||||||||||    
T  14416353 atacaatgacaaactccctacaattaatatgataaaatctatgtcactctaatacccatgct 14416292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 401
Target Start/End: Original strand, 30399946 - 30399983
Alignment:
Q  364 caaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  30399946 caaaatgcctacaaataatatgataaaatctaagtcac 30399983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 409
Target Start/End: Original strand, 32448494 - 32448581
Alignment:
Q  326 gaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgat---aaaatctaaatcaccataatac 409  Q
    |||||||||||||  | |||| ||||||| |||||| | ||||||||||||||| ||||||||   | |||||||||||||| |||||    
T  32448494 gaacaaactcacaacatccaagttaatagcatacaacggcaaaatgcctacaaataatatgatataataatctaaatcaccagaatac 32448581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 416
Target Start/End: Complemental strand, 37416902 - 37416841
Alignment:
Q  355 atacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||| | ||||||| ||||||| ||||||||||||| |||||||| | ||||| ||||||    
T  37416902 atacaacggcaaaatgtctacaaataatatgataaaatataaatcactagaatacacatgct 37416841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 403
Target Start/End: Complemental strand, 41694806 - 41694765
Alignment:
Q  362 gacaaaatgcctacaaacaatatgataaaatctaaatcacca 403  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||    
T  41694806 gacaaaatgcctataaataatatgataaaatctaagtcacca 41694765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 1415805 - 1415702
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| | ||||||||||  |||||||||||||||  |||||| ||||||| ||  || |  |||||||||||||| ||| |||||||| |||| |    
T  1415805 gctaaaaacgttaaaggtgaatctgcgaacaaactcacaacacccaagttaatagcattaaacggtaaaatgcctacaaataatctgataaaacctaagt 1415706  T
Q  399 cacc 402  Q
    ||||    
T  1415705 cacc 1415702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 390
Target Start/End: Complemental strand, 4264665 - 4264629
Alignment:
Q  354 tatacaatgacaaaatgcctacaaacaatatgataaa 390  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  4264665 tatacaacgacaaaatgcctacaaataatatgataaa 4264629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 392
Target Start/End: Complemental strand, 18695257 - 18695209
Alignment:
Q  344 aaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaat 392  Q
    |||||||||| ||||||  |||||||||||| ||| |||||||||||||    
T  18695257 aaattaatagaatacaagaacaaaatgcctataaataatatgataaaat 18695209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 396
Target Start/End: Original strand, 19028776 - 19028863
Alignment:
Q  312 taaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    ||||||||||||  |||||||| ||||||  || ||| ||||||| ||| || || |||||||||||||| | |||||||||||||||    
T  19028776 taaaaggtgaatttgcgaacaatctcacaacactcaagttaatagcataaaacgaaaaaatgcctacaaatagtatgataaaatctaa 19028863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 400
Target Start/End: Original strand, 19595804 - 19595856
Alignment:
Q  348 taatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    |||||| |||||| | |||||| |||||||| |||||||||||||| ||||||    
T  19595804 taatagcatacaaaggcaaaatacctacaaataatatgataaaatcaaaatca 19595856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 414
Target Start/End: Original strand, 36942974 - 36943088
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  ||||||| |||||||  ||||| |||||||| |||||  | || |||||||||||| |||||||||||||  || |    
T  36942974 gctaaaaacgtaaagggtgaatctgcgaacatactcacagcacccagattaatagcatacacgg-cataatgcctacaaataatatgataaaattcaagt 36943072  T
Q  399 caccataatacccatg 414  Q
    ||||  ||||||||||    
T  36943073 caccgaaatacccatg 36943088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 48316663 - 48316780
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| |||||| ||||||||||||||||| |||||||||||| ||||||    
T  48316663 gctaaaaacctaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaacctaaat 48316762  T
Q  399 caccataatacccatgct 416  Q
    | ||  ||||||||||||    
T  48316763 cgccgaaatacccatgct 48316780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 12141158 - 12141276
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat--acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaa 397  Q
    ||||||||| ||||||||||||  |||||||||||||||   |||||| ||||||| |||||| | |||||||| |||||| |||||||||||||||||     
T  12141158 gctaaaaacgtaaaaggtgaatatgcgaacaaactcacaacaacccaagttaatagcatacaacggcaaaatgcatacaaataatatgataaaatctaag 12141257  T
Q  398 tcaccataatacccatgct 416  Q
    |||||  ||||||||||||    
T  12141258 tcaccgaaatacccatgct 12141276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 322 - 416
Target Start/End: Original strand, 9450010 - 9450105
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||||||  ||| |||||||||| |||||| | ||||||||||||||| |||||||||||| ||||||||| | ||||||||||||    
T  9450010 atgcgaacaaactcacaacacctaaattaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaaatcactaaaatacccatgct 9450105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 323 - 410
Target Start/End: Complemental strand, 48930924 - 48930836
Alignment:
Q  323 tgcgaacaaactcaca-tacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacc 410  Q
    |||||||||||||||| ||||||| ||||||| |||||| | ||||||||| ||||| |||||||| ||||||||||||||| ||||||    
T  48930924 tgcgaacaaactcacaatacccaagttaatagcatacaacggcaaaatgccaacaaataatatgatgaaatctaaatcaccagaatacc 48930836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 416
Target Start/End: Original strand, 35665012 - 35665103
Alignment:
Q  326 gaacaaactcaca-tacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||| ||||||| ||||||| |||||| ||||||||||| | ||| |||||||||||||||||||||| | ||||| ||||||    
T  35665012 gaacaaactcacagtacccaagttaatagcatacaacgacaaaatgccaaaaaataatatgataaaatctaaatcactaaaatacacatgct 35665103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 35133164 - 35133070
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||| |||||| ||||||| |||||| | ||||||||||| ||| |||||||| ||||||||||||| | ||||| ||||||    
T  35133164 tgcgaacaaactcacatcacccaagttaatagcatacaacggcaaaatgcctagaaataatatgatgaaatctaaatcactagaatactcatgct 35133070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 416
Target Start/End: Complemental strand, 40993397 - 40993280
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||  |||||| ||||||||||||||||| ||||||||||||  ||| |    
T  40993397 gctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaataacatacaacgacaaaatgcctacaaataatatgataaaacttaagt 40993298  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||||||||||    
T  40993297 caccgaaatacccatgct 40993280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 402
Target Start/End: Original strand, 45349593 - 45349753
Alignment:
Q  247 aaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaa--tgcgaacaaactcacat-ac 341  Q
    ||||| |||||| |||||| ||||| |||| |||| | ||||||| |  ||| ||  ||||||||| |||| ||||||  ||||||||||||||||  ||    
T  45349593 aaaaaaaaaacgatattcattaatttaaatcgatagagtacatcagatacaaatatcgctaaaaacgtaaagggtgaacctgcgaacaaactcacaacac 45349692  T
Q  342 ccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    |||| ||||||| ||| || | ||||||||||||||| |||||||||||| ||||||||||    
T  45349693 ccaagttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaaatcacc 45349753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 416
Target Start/End: Complemental strand, 48061661 - 48061545
Alignment:
Q  303 ctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatc 399  Q
    |||||||| |||| |||||||  ||||||||||||| |  |||||| ||||||| |||||| | ||||||||||||||| |||||||||||| |||||||    
T  48061661 ctaaaaacgtaaagggtgaatctgcgaacaaactcataacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaaatc 48061562  T
Q  400 accataatacccatgct 416  Q
    |||  ||||| ||||||    
T  48061561 accgaaatactcatgct 48061545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 416
Target Start/End: Complemental strand, 22743143 - 22743067
Alignment:
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||| |||||| | ||||||||| ||||| |||||||| ||||||||||||||| ||||| ||||||    
T  22743143 acccaaattaatagcatacaacggcaaaatgccaacaaataatatgatgaaatctaaatcaccagaatactcatgct 22743067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 39171441 - 39171558
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  || |||||||||| |  |||||| ||||||| |||||| | ||||||||||||||| |||||||||||| |||| |    
T  39171441 gctaaaaacgtaaagggtgaatctgcaaacaaactcatagcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagt 39171540  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||||||||||    
T  39171541 caccgaaatacccatgct 39171558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 242 - 408
Target Start/End: Original strand, 41553225 - 41553394
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaatgc--gaacaaactcaca 338  Q
    |||||||||| |||||| |||||| | ||||||||  ||| ||||||||| ||||||| |  |||||||| |||| |||||||    |||||||||||||    
T  41553225 ttgacaaaaacaaaacgatattcattcattcaaattaatagaatacatcagaatcaacatcactaaaaacgtaaagggtgaatctaggaacaaactcaca 41553324  T
Q  339 tacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
       |||| ||||||| |||||| | |||||| | || |||  ||||||||||||||||||||||| ||||    
T  41553325 gcaccaagttaatagcatacaacggcaaaatacgtataaatgatatgataaaatctaaatcaccaaaata 41553394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 24069293 - 24069362
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||| |||||| || |||||||||||||| |||||||||||||||||||||||| ||| | ||||||    
T  24069293 ttaatagcatacaacgataaaatgcctacaaataatatgataaaatctaaatcaccagaatcctcatgct 24069362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 398
Target Start/End: Original strand, 46822616 - 46822692
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    |||||||||||||||||  | |||| ||||||| ||||||||||||||||| |||||| |||||||||||||||||||    
T  46822616 atgcgaacaaactcacaacatccaagttaatagcatacaatgacaaaatgc-tacaaataatatgataaaatctaaat 46822692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 8001397 - 8001500
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| |||||| | ||||||||||| ||| |||||||||||| |||| |    
T  8001397 gctaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctataaataatatgataaaacctaagt 8001496  T
Q  399 cacc 402  Q
    ||||    
T  8001497 cacc 8001500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 413
Target Start/End: Complemental strand, 42978850 - 42978736
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||| ||||||||  |||||| ||||||| |||||| | ||||||||||||| | |||||||||||| |||| |    
T  42978850 gctaaaaacgtaaagggtgaatctgcgaacgaactcacaacacccaagttaatagcatacaacggcaaaatgcctacatataatatgataaaacctaagt 42978751  T
Q  399 caccataatacccat 413  Q
    ||||  |||||||||    
T  42978750 caccgaaatacccat 42978736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 13796803 - 13796897
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  | |||| ||||||| |||||| ||||||||||||||||| ||||||||||||  ||| |||||  ||||| ||||||    
T  13796803 tgcgaacaaactcacaacatccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaacttaagtcacctaaatactcatgct 13796897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 416
Target Start/End: Complemental strand, 19297106 - 19296993
Alignment:
Q  306 aaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    |||||||||| |||||||  |||||||||||||||  |||||||||||||| ||| ||   ||||||||||||||| ||||||||||||  ||| | |||    
T  19297106 aaaacttaaagggtgaatctgcgaacaaactcacaacacccaaattaatagcatataacagcaaaatgcctacaaataatatgataaaacttaagttacc 19297007  T
Q  403 ataatacccatgct 416  Q
      ||||||||||||    
T  19297006 gaaatacccatgct 19296993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 34899458 - 34899575
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||||||||||  | |||| ||||||| |||||| | |||||||| |||||| ||||||||||||  ||| |    
T  34899458 gctaaaaacgtaaagggtgaatctgcgaacaaactcacaacatccaagttaatagcatacaacggcaaaatgcatacaaataatatgataaaacttaagt 34899557  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||||||||||    
T  34899558 caccgaaatacccatgct 34899575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 37837309 - 37837412
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| ||| || | ||||||||||||||  |||||||||||| |||| |    
T  37837309 gctaaaaacgtaaagggtgaatatgcgaacaaactcacagcacccaagttaatagcataaaacggcaaaatgcctacaagtaatatgataaaacctaagt 37837408  T
Q  399 cacc 402  Q
    ||||    
T  37837409 cacc 37837412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 414
Target Start/End: Original strand, 28044545 - 28044722
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaatg--cgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | ||||||| |  |||  |  ||||||||| |||| |||||||   ||||||||||||     
T  28044545 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctacgaacaaactcat 28044644  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    |  | |||| ||||||| |||||| | ||||||| ||| ||| |||||||||||| ||||||||||  ||||||||||    
T  28044645 aacatccaagttaatagcatacaacggcaaaatgtctaaaaataatatgataaaacctaaatcaccgaaatacccatg 28044722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 416
Target Start/End: Complemental strand, 25068255 - 25068185
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctac-aaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||| |||||||| |||||||||| ||| ||| ||||||||||||||||||||| || || |||||||||    
T  25068255 ttaatggtatacaacgacaaaatgcttactaaataatatgataaaatctaaatcatcaaaacacccatgct 25068185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 402
Target Start/End: Complemental strand, 28476401 - 28476363
Alignment:
Q  364 caaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  28476401 caaaatgcctacaaataatatgataaaatctaaatcacc 28476363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 402
Target Start/End: Complemental strand, 38799019 - 38798918
Alignment:
Q  304 taaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    ||||||| || |||||||||  |||||||||||||||  | |||| ||||||| |||  | | ||||||||||||||| ||||||||||||||||| |||    
T  38799019 taaaaacgtacaaggtgaatctgcgaacaaactcacaacatccaagttaatagcataagacggcaaaatgcctacaaataatatgataaaatctaagtca 38798920  T
Q  401 cc 402  Q
    ||    
T  38798919 cc 38798918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 392
Target Start/End: Original strand, 46244159 - 46244196
Alignment:
Q  355 atacaatgacaaaatgcctacaaacaatatgataaaat 392  Q
    |||||||||||||||||||||||| |||||||||||||    
T  46244159 atacaatgacaaaatgcctacaaataatatgataaaat 46244196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 391
Target Start/End: Original strand, 28407707 - 28407861
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||| ||||| |||||| |||||| | |||||||| |||| | |||||||||  |||  |  ||||||||| |||| ||| |||  ||||||||||||||    
T  28407707 ttgataaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacataaagggtaaatctgcgaacaaactcac 28407806  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    |  | |||| ||||||| |||||| | ||||||| ||||||| ||||||||||||    
T  28407807 agcatccaagttaatagcatacaacggcaaaatgtctacaaataatatgataaaa 28407861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 409
Target Start/End: Original strand, 9977104 - 9977171
Alignment:
Q  342 ccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    |||| ||||||| |||||| ||||||||| ||| ||| ||||||||||||||||| ||| || |||||    
T  9977104 ccaagttaatagcatacaacgacaaaatgtctaaaaataatatgataaaatctaactcatcaaaatac 9977171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 392
Target Start/End: Complemental strand, 23085744 - 23085673
Alignment:
Q  323 tgcgaacaaactcaca-tacccaaattaatagtatacaatgacaaaatgcctacaaaca-atatgataaaat 392  Q
    |||||||||||||||| || |||||||||||| ||| || |||| |||||||||||| | ||||||||||||    
T  23085744 tgcgaacaaactcacagtatccaaattaatagcatataacgacataatgcctacaaaaatatatgataaaat 23085673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 25255444 - 25255350
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  | | || ||||||| |||||| |||||||||||||||||  |||| ||||| ||||| |||| | ||| ||||||||    
T  25255444 tgcgaacaaactcacaacatctaagttaatagcatacaacgacaaaatgcctacaaatgatattataaactctaagtcactaaaatgcccatgct 25255350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 416
Target Start/End: Complemental strand, 46700248 - 46700158
Alignment:
Q  327 aacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||  |||| | ||||||| ||| || | ||||||||||| ||| ||||||||||||||||| |||||  |||| |||||||    
T  46700248 aacaaactcacaacaccctagttaatagcatataacggcaaaatgcctataaataatatgataaaatctaagtcaccgaaatatccatgct 46700158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 396
Target Start/End: Complemental strand, 47590524 - 47590454
Alignment:
Q  327 aacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    ||||||||||||  |||||| |||||||  ||||| | ||||||||||||||| |||||||||||| ||||    
T  47590524 aacaaactcacaacacccaagttaatagcttacaacggcaaaatgcctacaaataatatgataaaacctaa 47590454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 409
Target Start/End: Original strand, 3224343 - 3224372
Alignment:
Q  380 aatatgataaaatctaaatcaccataatac 409  Q
    ||||||||||||||||||||||||||||||    
T  3224343 aatatgataaaatctaaatcaccataatac 3224372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 25287085 - 25287154
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||| ||||||   ||||||| ||||||| ||||||||||||||||| |||||  |||| |||||||    
T  25287085 ttaatagcatacaacagcaaaatggctacaaataatatgataaaatctaagtcaccgaaatatccatgct 25287154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 29617551 - 29617647
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacatacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    ||||||||| |||| |||||||  || ||||||||||||   |||| ||||||| |  |||  |||||||| ||||||| |||||||||||||||||    
T  29617551 gctaaaaacgtaaatggtgaatctgcaaacaaactcacaacaccaagttaatagcactcaacaacaaaatgtctacaaataatatgataaaatctaa 29617647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 401
Target Start/End: Complemental strand, 3398364 - 3398328
Alignment:
Q  365 aaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  3398364 aaaatgcctaaaaataatatgataaaatctaaatcac 3398328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 416
Target Start/End: Complemental strand, 2521037 - 2520920
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| |||| ||||||||||||||    
T  2521037 gctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatacgataaaatctaaat 2520938  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||||||||||    
T  2520937 caccgaaatacccatgct 2520920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 242 - 409
Target Start/End: Original strand, 47320202 - 47320373
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcaca 338  Q
    |||||||||| ||||   |||||| | |||||||| |||| ||||||||| ||||||  | ||||||||| ||||   |||||  |||||||||||||||    
T  47320202 ttgacaaaaacaaaattatattcattcattcaaatcgatagaatacatcagaatcaagatcgctaaaaacgtaaagaatgaatctgcgaacaaactcaca 47320301  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
      |||||| ||||||| |||||| | ||||||||||||||| ||||||||| |||||||||||||| |||||    
T  47320302 gcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgatataatctaaatcaccagaatac 47320373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 303 - 414
Target Start/End: Complemental strand, 36194965 - 36194851
Alignment:
Q  303 ctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatc 399  Q
    |||||||| || |||||||||  |||||||||||||||  | |||| ||||||| |||||| | ||||||||||||||| |||||||| |||||||||||    
T  36194965 ctaaaaacatataaggtgaatctgcgaacaaactcacaacatccaagttaatagcatacaacggcaaaatgcctacaaataatatgatgaaatctaaatc 36194866  T
Q  400 accataatacccatg 414  Q
    |||| ||||||||||    
T  36194865 accagaatacccatg 36194851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 242 - 408
Target Start/End: Original strand, 36204169 - 36204339
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcaca 338  Q
    |||||||||| |||||| |||||  | |||||||| || | ||||||||| ||||||| | ||||||||| |||| |||||||  | |||||||||||||    
T  36204169 ttgacaaaaacaaaacgatattctttcattcaaattgacagaatacatcagaatcaacatcgctaaaaacataaagggtgaatctgtgaacaaactcaca 36204268  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
      | |||||||||||  ||| |||| ||||||  ||||||| |||||||||||||||||||||||| ||||    
T  36204269 acatccaaattaataacatataatggcaaaatatctacaaataatatgataaaatctaaatcaccagaata 36204339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 302 - 408
Target Start/End: Original strand, 6155071 - 6155183
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat----acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatcta 395  Q
    ||||||||| |||| |||||||  |||||||||||||||     |||||| ||||||| |||||| ||||||||||||||||| ||||||||| ||||||    
T  6155071 gctaaaaacataaagggtgaatctgcgaacaaactcacagtagcacccaagttaatagcatacaacgacaaaatgcctacaaataatatgatagaatcta 6155170  T
Q  396 aatcaccataata 408  Q
    |||||||| ||||    
T  6155171 aatcaccagaata 6155183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 247 - 416
Target Start/End: Complemental strand, 43510511 - 43510337
Alignment:
Q  247 aaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-ac 341  Q
    ||||| |||||| |||||| | |||||||| |||| | |||||||||  ||| ||  ||||||||| |||| |||||||  |||||||||||||||  ||    
T  43510511 aaaaacaaaacgatattcattcattcaaatcgataaagtacatcaaatacaaatatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcac 43510412  T
Q  342 ccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||| |||||   |||||| ||||||||||||||||| ||||||||||||  ||| |||||  ||||||||||||    
T  43510411 ccaagttaatgacatacaacgacaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgct 43510337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 401
Target Start/End: Original strand, 29960800 - 29960902
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| ||||||||||||  |||||||||||||||  |||||| |||| || |||||| | ||||||||||||||| | |||||||||||||||||    
T  29960800 gctaaaaacataaaaggtgaatctgcgaacaaactcacagcacccaagttaaaagcatacaacggcaaaatgcctacaaatagtatgataaaatctaaat 29960899  T
Q  399 cac 401  Q
    |||    
T  29960900 cac 29960902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 416
Target Start/End: Original strand, 51888084 - 51888179
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||||||  ||| || ||||||| || ||||| ||||| ||||||||| |||||||||||||||||||||||| ||||| ||||||    
T  51888084 atgcgaacaaactcacaacacctaagttaatagcatgcaatggcaaaacgcctacaaataatatgataaaatctaaatcaccagaatactcatgct 51888179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 31891161 - 31891255
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| ||||| || ||||||||||||||| ||||| ||||||    
T  31891161 tgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatataatgaaatctaaatcaccagaatactcatgct 31891255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 408
Target Start/End: Complemental strand, 37465713 - 37465631
Alignment:
Q  327 aacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    ||||||||||||  |||||| ||||||| |||||| |||||||||| |||||| |||||||||||||||||||||||| ||||    
T  37465713 aacaaactcacaacacccaagttaatagcatacaacgacaaaatgcttacaaataatatgataaaatctaaatcaccagaata 37465631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 56040497 - 56040614
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||| ||||||||||  | |||| ||||||| |||||| ||||||||||||||||| |||||||||||| |||| |    
T  56040497 gctaaaaacgtaaagggtgaatctgcgagcaaactcacagcatccaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaacctaagt 56040596  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||||||||||    
T  56040597 caccgaaatacccatgct 56040614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 242 - 416
Target Start/End: Original strand, 21686031 - 21686210
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | ||||||| |  |||  |  |||| |||| |||| |||||||  ||||||||||||||    
T  21686031 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctacaaacgtaaagggtgaatatgcgaacaaactcac 21686130  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |  |||||| ||||||  |||||  | ||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||    
T  21686131 agcacccaagttaataacatacagcggcaaaatgcctacaaataatatgataaaacctaaatcaccaaaatactcatgct 21686210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 247 - 403
Target Start/End: Complemental strand, 28857715 - 28857555
Alignment:
Q  247 aaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaa--tgcgaacaaactcaca-tacc 342  Q
    ||||| |||||| |||||| | |||||||| |||||||||||||  ||||||| | ||||||||| |||| | ||||  ||||||||||||||||    |    
T  28857715 aaaaacaaaacgatattcattcattcaaattgatataatacatcggaatcaacatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacagctgc 28857616  T
Q  343 caaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacca 403  Q
    ||| ||||||| ||| || | |||||| |||||||| |||||||| |||||||||||||||    
T  28857615 caagttaatagcatataagggcaaaatacctacaaaaaatatgatgaaatctaaatcacca 28857555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 52944526 - 52944452
Alignment:
Q  342 ccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||| ||||||| ||| ||  |||||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  52944526 ccaagttaatagcatataactacaaaatgcctacaaaaaatatgatgaaatctaaatcaccagaatacccatgct 52944452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 9714166 - 9714066
Alignment:
Q  304 taaaaacttaaaaggtgaa--tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    ||||||| |||| ||||||  ||||||||||||||||  || ||| |||| |  |||||||||||||||||||||||| ||||||||||||||||| |||    
T  9714166 taaaaacgtaaagggtgaacctgcgaacaaactcacaacactcaagttaacaacatacaatgacaaaatgcctacaaataatatgataaaatctaattca 9714067  T
Q  401 c 401  Q
    |    
T  9714066 c 9714066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 416
Target Start/End: Original strand, 9145752 - 9145859
Alignment:
Q  312 taaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    ||||||||||||  |||||| ||||||||  ||| |||||||||| ||||||    |||||||||| ||||||||||||| |||||||||||||| ||||    
T  9145752 taaaaggtgaatctgcgaacgaactcacaacacctaaattaatagcatacaaaagtaaaatgcctataaacaatatgatacaatctaaatcaccagaata 9145851  T
Q  409 cccatgct 416  Q
    | ||||||    
T  9145852 ctcatgct 9145859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 45418749 - 45418667
Alignment:
Q  323 tgcgaacaaactcacat---acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    ||||||||||||||||    |||||  ||||||| |||||| ||||||||||||||||| ||||||||||||||||| |||||    
T  45418749 tgcgaacaaactcacaacacacccatgttaatagcatacaacgacaaaatgcctacaaataatatgataaaatctaagtcacc 45418667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 2069497 - 2069548
Alignment:
Q  365 aaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||||||||    
T  2069497 aaaatgcatacaaataatatgataaaatataaatcaccataatacccatgct 2069548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 391
Target Start/End: Complemental strand, 9178609 - 9178519
Alignment:
Q  304 taaaaacttaaaaggtgaa--tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    ||||||| |||| ||||||  ||||||||||||||| | || ||| ||||||| |||||| ||||||||||||||||| ||||||||||||    
T  9178609 taaaaacataaagggtgaaactgcgaacaaactcacgtcacacaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaa 9178519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 416
Target Start/End: Complemental strand, 18936013 - 18935923
Alignment:
Q  327 aacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||  |||||| ||||||   ||||||  ||||||||||||||| |||||||| ||||||||||||||| |||||| |||||    
T  18936013 aacaaactcacaacacccaagttaataacgtacaatagcaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacctatgct 18935923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 416
Target Start/End: Complemental strand, 22611441 - 22611324
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||  |||||| | ||||||||||||||| ||||||||||||  ||| |    
T  22611441 gctaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaatttaataccatacaacggcaaaatgcctacaaataatatgataaaacttaagt 22611342  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||| ||||||    
T  22611341 caccgaaatactcatgct 22611324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 396
Target Start/End: Complemental strand, 35348565 - 35348468
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    ||||||||| |||| |||||||  || ||||||||||||  |||||| ||||||| ||| |||| ||||||||||||||| |||||||||||| ||||    
T  35348565 gctaaaaacgtaaagggtgaatctgcaaacaaactcacaacacccaagttaatagcataaaatggcaaaatgcctacaaataatatgataaaacctaa 35348468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 396
Target Start/End: Complemental strand, 43095863 - 43095789
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    ||||||||||||||||| | |||||||||||| ||||||  ||||||| ||||||||  ||||||||||||||||    
T  43095863 tgcgaacaaactcacatcatccaaattaatagcatacaactacaaaatacctacaaatgatatgataaaatctaa 43095789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 408
Target Start/End: Original strand, 52933823 - 52933909
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    |||| |||||||||||| || ||| ||||||  ||||||   |||||| |||||||| |||||||||||||||||||||||||||||    
T  52933823 tgcgcacaaactcacatcactcaagttaataacatacaaaagcaaaatacctacaaataatatgataaaatctaaatcaccataata 52933909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 242 - 416
Target Start/End: Original strand, 19853301 - 19853480
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaactagc--taaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | ||||||| |  |||  | |  ||||||| |||| |||||||  ||||||||||||||    
T  19853301 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaagggtgaatctgcgaacaaactcac 19853400  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |  |||||| ||||||| |||||| | ||||||||||| ||| ||||||||||||  ||| |||||  |||| |||||||    
T  19853401 aacacccaagttaatagcatacaacggcaaaatgcctagaaataatatgataaaacttaagtcaccgaaatatccatgct 19853480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 396
Target Start/End: Original strand, 29120278 - 29120327
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    ||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  29120278 ttaatagcatacaacgacaaaatgcctacaaataatatgataaaatctaa 29120327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 414
Target Start/End: Complemental strand, 32766746 - 32766657
Alignment:
Q  326 gaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    |||||||||||||  |||||| ||||||| |||||| |||| |||||||||||| ||||||||||||  ||| |||||  ||||||||||    
T  32766746 gaacaaactcacagcacccaagttaatagcatacaacgacataatgcctacaaataatatgataaaacttaagtcaccgaaatacccatg 32766657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 414
Target Start/End: Complemental strand, 36161943 - 36161854
Alignment:
Q  326 gaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    |||||||||||||  |||||| ||||||  ||| || ||| ||||||||||||| |||||||||||||||||||||| | ||||| ||||    
T  36161943 gaacaaactcacaacacccaagttaataacatataacgaccaaatgcctacaaataatatgataaaatctaaatcacgaaaatactcatg 36161854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 414
Target Start/End: Complemental strand, 9048859 - 9048807
Alignment:
Q  362 gacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    ||||||||||||||||| ||||||||||||| ||||||| || ||||||||||    
T  9048859 gacaaaatgcctacaaataatatgataaaatttaaatcatcagaatacccatg 9048807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 416
Target Start/End: Complemental strand, 33921290 - 33921195
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||||||  | |||| ||||||| ||||||  | | |||||||||||| ||||||||||||||||| ||||   ||||||||||||    
T  33921290 atgcgaacaaactcacaacatccaagttaatagcatacaactatacaatgcctacaaataatatgataaaatctaagtcactgaaatacccatgct 33921195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 390
Target Start/End: Original strand, 52060818 - 52060865
Alignment:
Q  343 caaattaatagtatacaatgacaaaatgcctacaaacaatatgataaa 390  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||    
T  52060818 caaattaatagtatacaacaacaaaatgcctacaaaaaatatgataaa 52060865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 10496570 - 10496476
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||| |  |||||| ||||||| |||| |   ||||||||||||||| |||||||||||| |||| |||||  ||||||||||||    
T  10496570 tgcgaacaaactcaaagcacccaagttaatagcatacgacagcaaaatgcctacaaataatatgataaaacctaactcaccgaaatacccatgct 10496476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 409
Target Start/End: Original strand, 22305520 - 22305582
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    ||||||| |||||| |||||||| |||||||| ||||||||||||||||| ||| || |||||    
T  22305520 ttaatagcatacaacgacaaaatacctacaaataatatgataaaatctaagtcatcaaaatac 22305582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 27652178 - 27652085
Alignment:
Q  323 tgcgaacaaactcac-atacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||| | || ||| ||||||| |||||| | ||||||| ||||||| |||||||| ||||||||| ||| | ||||||||||||    
T  27652178 tgcgaacaaactcacaacactcaagttaatagcatacaacggcaaaatgtctacaaataatatgatgaaatctaaa-cactagaatacccatgct 27652085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 43853678 - 43853584
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  | |||| ||||||  ||||||  |||||||||  ||||| ||||||||||||||||||||| | |||||| ||||||    
T  43853678 tgcgaacaaactcacaacatccaagttaataacatacaacaacaaaatgctgacaaataatatgataaaatctaaatcatcttaatacgcatgct 43853584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 416
Target Start/End: Complemental strand, 52978959 - 52978885
Alignment:
Q  342 ccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||| ||||||  |||||||||||||||  ||||||| ||||| ||||||||||| |||||  ||||||||||||    
T  52978959 ccaagttaataaaatacaatgacaaaataactacaaataatataataaaatctaagtcaccgaaatacccatgct 52978885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 416
Target Start/End: Complemental strand, 53811285 - 53811169
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||| ||||||  |||||| ||||||| |||||| | ||||||||||||||| ||||||||||||  ||| |    
T  53811285 gctaaaaacgtaaagggtgaatctgcgaacaa-ctcacaacacccaagttaatagcatacaacgccaaaatgcctacaaataatatgataaaacttaagt 53811187  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||| ||||||    
T  53811186 caccgaaatactcatgct 53811169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 416
Target Start/End: Original strand, 48351093 - 48351154
Alignment:
Q  355 atacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||| |||||||||| |||||| || |||||| ||||||||||||| |||||| ||||||    
T  48351093 atacaacgacaaaatgcatacaaataacatgatacaatctaaatcaccgtaatactcatgct 48351154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 413
Target Start/End: Original strand, 17949198 - 17949289
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccat 413  Q
    ||||||||||||||||  |||||| ||||||  ||||||  ||||||||| |||| | |||||||||||| |||| ||| || |||||||||    
T  17949198 tgcgaacaaactcacaacacccaagttaataacatacaagaacaaaatgcatacatataatatgataaaacctaagtcatcaaaatacccat 17949289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 413
Target Start/End: Original strand, 17953050 - 17953141
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccat 413  Q
    ||||||||||||||||  |||||| ||||||  ||||||  ||||||||| |||| | |||||||||||| |||| ||| || |||||||||    
T  17953050 tgcgaacaaactcacaacacccaagttaataacatacaagaacaaaatgcatacatataatatgataaaacctaagtcatcaaaatacccat 17953141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 24098943 - 24099033
Alignment:
Q  323 tgcgaacaaactcacatacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    ||||||||||||||||   |||| ||||||| || ||| | ||||||||||||||| |||||||||||| |||| ||||   ||||||||||    
T  24098943 tgcgaacaaactcacagcaccaagttaatagcat-caacggcaaaatgcctacaaataatatgataaaacctaagtcactgaaatacccatg 24099033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 48257485 - 48257575
Alignment:
Q  304 taaaaacttaaaaggtgaat--gcgaacaaactcacatac-ccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    ||||||| |||| |||||||  ||||||||||||||| |  |||| ||||||| |||||| | |||||| |||||||| ||||||||||||    
T  48257485 taaaaacgtaaagggtgaatctgcgaacaaactcacaaaatccaagttaatagcatacaacggcaaaatacctacaaataatatgataaaa 48257575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 416
Target Start/End: Complemental strand, 21662695 - 21662578
Alignment:
Q  302 gctaaaaacttaaaaggtgaa--tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| ||||||  ||||||||| ||||||  || ||| ||||||| ||||||   |||| || ||||||| |||||||||||| |||| |    
T  21662695 gctaaaaacataaatggtgaaactgcgaacaacctcacaacactcaagttaatagcatacaacaccaaagtgtctacaaataatatgataaaacctaagt 21662596  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||||||||||    
T  21662595 caccgaaatacccatgct 21662578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 416
Target Start/End: Complemental strand, 21671459 - 21671342
Alignment:
Q  302 gctaaaaacttaaaaggtgaa--tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| ||||||  ||||||||| ||||||  || ||| ||||||| ||||||   |||| || ||||||| |||||||||||| |||| |    
T  21671459 gctaaaaacataaatggtgaaactgcgaacaacctcacaacactcaagttaatagcatacaacaccaaagtgtctacaaataatatgataaaacctaagt 21671360  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||||||||||    
T  21671359 caccgaaatacccatgct 21671342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 408
Target Start/End: Complemental strand, 36184746 - 36184680
Alignment:
Q  342 ccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    |||| ||||||| |||||| ||||||||||||| ||| | |||||||||||| || | |||||||||    
T  36184746 ccaagttaatagcatacaacgacaaaatgcctagaaatagtatgataaaatcaaagtgaccataata 36184680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 400
Target Start/End: Complemental strand, 44596895 - 44596817
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatca 400  Q
    ||||||||||||||||  |||||| ||||||| |||||| |  |||||  ||||||| ||||||||||||| |||||||    
T  44596895 tgcgaacaaactcacagcacccaagttaatagcatacaacggtaaaatagctacaaataatatgataaaatgtaaatca 44596817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 401
Target Start/End: Complemental strand, 55228180 - 55228134
Alignment:
Q  355 atacaatgacaaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
    |||||| ||||||||| ||||||| |||||||| |||||||||||||    
T  55228180 atacaacgacaaaatgtctacaaataatatgattaaatctaaatcac 55228134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 411
Target Start/End: Original strand, 1621427 - 1621472
Alignment:
Q  366 aaatgcctacaaacaatatgataaaatctaaatcaccataataccc 411  Q
    ||||| ||||||| |||||||| ||||||||||||||| |||||||    
T  1621427 aaatgtctacaaataatatgatgaaatctaaatcaccagaataccc 1621472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 413
Target Start/End: Original strand, 33332485 - 33332534
Alignment:
Q  364 caaaatgcctacaaacaatatgataaaatctaaatcaccataatacccat 413  Q
    |||||||| |||||| ||||||||||||||||||||| || ||| |||||    
T  33332485 caaaatgcatacaaataatatgataaaatctaaatcatcaaaatgcccat 33332534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 10258812 - 10258856
Alignment:
Q  364 caaaatgcctacaaacaatatgataaaatctaaatcaccataata 408  Q
    ||||||| ||||||| ||||||||||||||||| |||||| ||||    
T  10258812 caaaatgtctacaaataatatgataaaatctaagtcaccaaaata 10258856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 53444376 - 53444273
Alignment:
Q  302 gctaaaaacttaaaaggtgaatg--cgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| ||||||||||||   ||||||||||||||  |||||| ||||||| ||| || |  |||||  ||||||| |||||||||||| |||| |    
T  53444376 gctaaaaacgtaaaaggtgaatctacgaacaaactcacagcacccaagttaatagcataaaacggaaaaatatctacaaataatatgataaaacctaagt 53444277  T
Q  399 cacc 402  Q
    ||||    
T  53444276 cacc 53444273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 323 - 414
Target Start/End: Original strand, 1552 - 1644
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    ||||||||||||||||| | | |||||||||| ||| || || |||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  1552 tgcgaacaaactcacatcatcaaaattaatagcatataacgataaaatgcctacaaataatatgataaaatctaaatcaccagaatacccatg 1644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 242 - 397
Target Start/End: Original strand, 10332337 - 10332496
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcaca 338  Q
    |||||||||| |||||  ||| || | |||||||| |||| ||||||||| ||||||| | ||||||||| |||| | |||||  | |||||||||||||    
T  10332337 ttgacaaaaacaaaacaatatccattcattcaaattgatagaatacatcagaatcaacatcgctaaaaacgtaaaggatgaatctgtgaacaaactcaca 10332436  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaa 397  Q
    | |||||| ||||||| ||| || ||||||||||||||||| |||||||| |||||||||    
T  10332437 tcacccaagttaatagcatataaagacaaaatgcctacaaaaaatatgatgaaatctaaa 10332496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 416
Target Start/End: Complemental strand, 13007528 - 13007349
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | |||||||||  |||  |  ||||||||| |||| |||||||  || |||||||||||    
T  13007528 ttgacaaaaacaaaacgatattcattcattcaaattgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcac 13007429  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |  |||||| ||||||| |||||| | ||||||||||||||| ||||||||||||  ||| |||||  ||||||||||||    
T  13007428 agcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatacccatgct 13007349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 242 - 409
Target Start/End: Original strand, 8088002 - 8088173
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcaca 338  Q
    |||||||||| |||| | |||||| | |||||||| |||| ||| ||||| | ||||  | ||||||||  |||||| |||||  ||||||||||||| |    
T  8088002 ttgacaaaaacaaaatgatattcattcattcaaattgatagaatgcatcagattcaagattgctaaaaaggtaaaagatgaatctgcgaacaaactcata 8088101  T
Q  339 t-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
      |||||| ||||||| |||||| | ||||||||||||||| ||||||||| |||||||||||||| |||||    
T  8088102 acacccaagttaatagcatacaaaggcaaaatgcctacaaataatatgatataatctaaatcaccagaatac 8088173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 14211441 - 14211347
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||| ||||||    |||||||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  14211441 tgcgaacaaactcacaacacccaagttaatagcatacaacagaaaaatgcctacaaataatatgatgaaatctaaatcaccagaatacccatgct 14211347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 26877983 - 26878076
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  | |||| ||||||| |||||| |||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||    
T  26877983 tgcgaacaaactcacaacatccaagttaatag-atacaacgacaaagtgcctacaaataatatgataaaatctaagtcaccaaaatacccatgct 26878076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 28540780 - 28540874
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||| |||||| |  |||||| ||||||| |||||||| ||||||||||||||| ||||||||||||    
T  28540780 tgcgaacaaactcacagcacccaagttaatagcatacaacggaaaaatgtctacaaataatatgatgaaatctaaatcaccaaaatacccatgct 28540874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 416
Target Start/End: Complemental strand, 34945630 - 34945513
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| |||||| ||||||||||||| ||| ||||||||||||  ||| |    
T  34945630 gctaaaaacgtaaagggtgaatctgcgaacaaactcacaacacccaagttaatagcatacaacgacaaaatgcctataaataatatgataaaacttaagt 34945531  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||||||||||    
T  34945530 caccgaaatacccatgct 34945513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 416
Target Start/End: Complemental strand, 38598034 - 38597917
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| |||||||||||| |||| |    
T  38598034 gctaaaaacgtaaagggtgaatttgcgaacaaactcacaacacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagt 38597935  T
Q  399 caccataatacccatgct 416  Q
    |||   ||||||||||||    
T  38597934 cactgaaatacccatgct 38597917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 242 - 391
Target Start/End: Complemental strand, 26825729 - 26825575
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac--tagctaaaaacttaaaaggtgaatg--cgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | || ||||||  |||   ||||||||||| |||| |||||||   |||||||||||||    
T  26825729 ttgacaaaaataaaacgatattcattcattcaaatcgatagagtatatcaaatacaaacatagctaaaaacgtaaagggtgaatctacgaacaaactcac 26825630  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    |  |||||| ||||||| |||||| | ||||||||||||||| ||||||||||||    
T  26825629 agcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaa 26825575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 401
Target Start/End: Original strand, 8096372 - 8096451
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
    ||||||||||||||||  |||||| ||||||| ||| |||| ||||||||||||||| |||||||||||| |||||||||    
T  8096372 tgcgaacaaactcacaccacccaagttaatagcataaaatggcaaaatgcctacaaataatatgataaaacctaaatcac 8096451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 2979180 - 2979274
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  | |||| ||||||| |||||| | || |||||||||||| |||||||| ||||||||||||||| ||||||| ||||    
T  2979180 tgcgaacaaactcacaacatccaagttaatagcatacaacggcacaatgcctacaaataatatgatgaaatctaaatcaccagaatacccgtgct 2979274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 396
Target Start/End: Complemental strand, 11867863 - 11867789
Alignment:
Q  323 tgcgaacaaactcaca-tacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    ||||||||| |||||| ||||||||||||||| ||||||  |||||||||||||||| ||||| |||||||||||    
T  11867863 tgcgaacaagctcacaatacccaaattaatagcatacaacaacaaaatgcctacaaataatataataaaatctaa 11867789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 245 - 401
Target Start/End: Original strand, 24229576 - 24229737
Alignment:
Q  245 acaaaaagaaaacgttattcaataattcaaatggatataatacatcaaa-atcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcacat- 339  Q
    ||||||| |||||| |||||| | |||||||| |||| | ||||||| | || ||| | ||||||||| ||||  ||||||  |||||||||||||||      
T  24229576 acaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatataaacatcgctaaaaacgtaaagagtgaatctgcgaacaaactcacagc 24229675  T
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
    |||||| ||||||| |||||| | ||||||||||||||| |||||||||||| |||| ||||    
T  24229676 acccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaacctaagtcac 24229737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 401
Target Start/End: Original strand, 35920895 - 35920949
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||    
T  35920895 ttaatagcatacaatgacaaaatgcctacaaataatatgataaaatcaaaatcac 35920949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 39567482 - 39567392
Alignment:
Q  325 cgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    ||||||||||||||  ||||||  |||||  |||||| ||||||||| ||||||| |||||||| ||||||||||||||| ||||||||||    
T  39567482 cgaacaaactcacaacacccaaggtaataacatacaacgacaaaatgtctacaaataatatgatgaaatctaaatcaccagaatacccatg 39567392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 402
Target Start/End: Complemental strand, 38007656 - 38007492
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | ||||||| |  |||  |  ||||||||| ||||||||||||  | ||||||||||||    
T  38007656 ttgacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaaacatcgctaaaaacgtaaaaggtgaatatgtgaacaaactcac 38007557  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    |  |||||| ||||||| ||| || | ||||||||||||||| |||||||||||| |||| |||||    
T  38007556 agcacccaagttaatagcataaaagg-caaaatgcctacaaataatatgataaaacctaattcacc 38007492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 396
Target Start/End: Original strand, 14082247 - 14082344
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    ||||||||| |||| |||||||  |||||||||||| ||| | | || ||||||| |||||| ||||||||||||||||| |||||||||||| ||||    
T  14082247 gctaaaaacataaagggtgaatctgcgaacaaactcccatcatcgaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaacctaa 14082344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 416
Target Start/End: Original strand, 14726249 - 14726429
Alignment:
Q  241 gttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaactagc--taaaaacttaaaaggtgaat--gcgaacaaactca 336  Q
    ||||||||||| |||||| |||||| | |||||||| |||| | ||||||| |  |||  | |  ||||||| |||| |||||||  | |||||||||||    
T  14726249 gttgacaaaaacaaaacgatattcattcattcaaatcgatagattacatcagatacaaacatcactaaaaacgtaaagggtgaatctgtgaacaaactca 14726348  T
Q  337 cat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||  | |||| |||||| |||| || ||||||||||||||||| |||||||||||| |||| |||||| ||| | ||||||    
T  14726349 cagcatccaagttaatattataaaacgacaaaatgcctacaaataatatgataaaacctaagtcaccaaaattcacatgct 14726429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 416
Target Start/End: Complemental strand, 25980394 - 25980278
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  || ||||||||||||| |||||| ||||||| ||| || | ||||||||||||||| ||||||||||||  ||| |    
T  25980394 gctaaaaacgtaaagggtgaatctgcaaacaaactcacatcacccaagttaatagcatataacggcaaaatgcctacaaataatatgataaaacttaagt 25980295  T
Q  399 caccataatacccatgct 416  Q
    ||| | ||||||||||||    
T  25980294 cacga-aatacccatgct 25980278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 391
Target Start/End: Original strand, 9113514 - 9113668
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaacta--gctaaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | ||||||| |  |||  |  ||||||||| |||| |||||||  |||||||||||||     
T  9113514 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcag 9113613  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    |  |||||| ||||||| |||||| |  |||||||||||||| ||||||||||||    
T  9113614 aacacccaagttaatagcatacaacggaaaaatgcctacaaataatatgataaaa 9113668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 401
Target Start/End: Complemental strand, 41630713 - 41630637
Alignment:
Q  326 gaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcac 401  Q
    |||||||||||||  ||| || ||||||| |||||| ||||||||| ||||||| ||||||||||||||||| ||||    
T  41630713 gaacaaactcacaacacctaagttaatagcatacaacgacaaaatgtctacaaataatatgataaaatctaagtcac 41630637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 6217113 - 6217018
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgaca-aaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  || ||| ||||||| ||||||||||  ||||||||||||| ||||||||||||| ||| |||||  ||||| ||||||    
T  6217113 tgcgaacaaactcacagcactcaagttaatagcatacaatgacttaaatgcctacaaataatatgataaaatttaagtcaccgaaatacacatgct 6217018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 10722932 - 10722881
Alignment:
Q  365 aaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||||||    
T  10722932 aaaatgcctacaaataatatgataaaatctaagtcaccgaaatacccatgct 10722881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 396
Target Start/End: Complemental strand, 7036428 - 7036359
Alignment:
Q  327 aacaaactcacatacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    |||||||||| | | |||| ||||||| ||||||   |||||| ||||||||||||||||||||||||||    
T  7036428 aacaaactcaaacaaccaatttaatagcatacaacagcaaaattcctacaaacaatatgataaaatctaa 7036359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 396
Target Start/End: Complemental strand, 7930366 - 7930317
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaa 396  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||| ||||    
T  7930366 ttaatggtatacaacgacaaaatgcctacaaataatatgataaaacctaa 7930317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 8984778 - 8984835
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac 299  Q
    |||||||||| |||||| |||||| | |||||||| |||| |||||||||||||||||    
T  8984778 ttgacaaaaacaaaacgatattcattcattcaaattgatagaatacatcaaaatcaac 8984835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 402
Target Start/End: Original strand, 31078318 - 31078373
Alignment:
Q  347 ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    ||||||| |||||||||||||||| ||| ||| ||||| ||||||| |||||||||    
T  31078318 ttaatagcatacaatgacaaaatgtctataaataatattataaaatttaaatcacc 31078373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 19103341 - 19103435
Alignment:
Q  323 tgcgaacaaactcacatacccaaa-ttaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||| |   ||||| ||||||| |||||| |  |||||||||| ||| |||||||| ||||||||||||||  ||||| ||||||    
T  19103341 tgcgaacaaactcatagcaccaaagttaatagcatacaacggaaaaatgcctataaataatatgatgaaatctaaatcaccggaatactcatgct 19103435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 416
Target Start/End: Original strand, 6011927 - 6012106
Alignment:
Q  242 ttgacaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaactagc--taaaaacttaaaaggtgaat--gcgaacaaactcac 337  Q
    |||||||||| |||||| |||||| | |||||||| |||| | ||||||| |  |||  | |  ||||||| |||| |||||||  ||||||||||||||    
T  6011927 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaagggtgaatctgcgaacaaactcac 6012026  T
Q  338 at-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    || |||||| ||||||| ||| || |  | |||||||||||| |||||||| |||  ||| ||||   ||||||||||||    
T  6012027 atcacccaagttaatagcataaaacggtagaatgcctacaaataatatgatcaaacttaagtcactgaaatacccatgct 6012106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 8984859 - 8984915
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaa 378  Q
    ||||||||||||||||  | |||| ||||||||||| || |||||||||||||||||    
T  8984859 tgcgaacaaactcacaacatccaagttaatagtatataacgacaaaatgcctacaaa 8984915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 392
Target Start/End: Original strand, 19100527 - 19100563
Alignment:
Q  356 tacaatgacaaaatgcctacaaacaatatgataaaat 392  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  19100527 tacaatgacaaaatgtctacaaataatatgataaaat 19100563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 19121126 - 19121046
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    ||||||||||||||||| | |||||||||||  ||||||   ||||| | ||||||| |||||||||||| |||| |||||    
T  19121126 tgcgaacaaactcacatcatccaaattaatatcatacaagagcaaaacgtctacaaataatatgataaaacctaagtcacc 19121046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 416
Target Start/End: Original strand, 92313 - 92464
Alignment:
Q  269 attcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaatgc--gaacaaactcacat-acccaaattaatagtatacaatgac 364  Q
    |||||||| |||||||||||| | ||| ||| | ||||||||| |||| |||||||    |||||||||||||| ||  || |||||||||| |||  ||    
T  92313 attcaaattgatataatacattagaattaacatcgctaaaaacataaagggtgaatctttgaacaaactcacatcacttaagttaatagtatgcaacaac 92412  T
Q  365 aaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||||||||||||||||| ||||  |||| ||||||||||||    
T  92413 aaaatgcctacaaacaatatgataaaatttaaactaccagaatacccatgct 92464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 245 - 416
Target Start/End: Original strand, 57881 - 58056
Alignment:
Q  245 acaaaaagaaaacgttattcaataattcaaatggatataatacatcaaaatcaac-tagctaaaaacttaaaaggtgaat--gcgaacaaactcacat-a 340  Q
    ||||||| |||||| |||||| | ||| |||| |||| ||||||||| ||| ||| | ||||||||| |||| | | |||  |||||||||||||||  |    
T  57881 acaaaaacaaaacgatattcattcatttaaattgatagaatacatcagaattaacatcgctaaaaacgtaaaggataaatctgcgaacaaactcacagca 57980  T
Q  341 cccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
     |||| ||||||| ||| || | ||||||||||||||| |||||||| ||||||||||||||| ||||| ||||||    
T  57981 tccaagttaatagcatataacggcaaaatgcctacaaaaaatatgatgaaatctaaatcaccagaatactcatgct 58056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 416
Target Start/End: Original strand, 32598 - 32715
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  | |||||||||||||  || ||| |||||||||||||  ||||||||||||||||| ||||||||||||||||| |    
T  32598 gctaaaaacgtaaagggtgaatctgggaacaaactcacaacactcaagttaatagtatacagcgacaaaatgcctacaaataatatgataaaatctaagt 32697  T
Q  399 caccataatacccatgct 416  Q
    ||||  ||||| ||||||    
T  32698 caccgaaatactcatgct 32715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 340 - 413
Target Start/End: Complemental strand, 93304 - 93231
Alignment:
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccat 413  Q
    |||||| ||||||| | ||||  |||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  93304 acccaagttaatagcacacaacaacaaaatgcctacaaacaatatgataaaatttaaatcaccagaatacccat 93231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 50991 - 50897
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||| |||||||| ||||||||||||||| ||||||||||||  ||| |||||  |||| |||||||    
T  50991 tgcgaacaaactcacagcacccaagttaatagcatacaatggcaaaatgcctacaaataatatgataaaacttaagtcaccgaaatatccatgct 50897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 18976 - 19036
Alignment:
Q  342 ccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcacc 402  Q
    ||||||||||||||||||| | |||||||| |||||| |||||||||||||| ||||||||    
T  18976 ccaaattaatagtatacaacggcaaaatgcatacaaataatatgataaaatccaaatcacc 19036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 416
Target Start/End: Original strand, 71192 - 71268
Alignment:
Q  340 acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||| ||||||| ||||||  |||||||||||||||| ||||| ||||||||||| ||| || ||||||||||||    
T  71192 acccaagttaatagcatacaacaacaaaatgcctacaaataatataataaaatctaagtcatcaaaatacccatgct 71268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 15707 - 15613
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||||  |||||| ||||||| ||| || | ||||||||||||||| |||||||||||| |||| |||||  |||| |||||||    
T  15707 tgcgaacaaactcacagcacccaagttaatagcatataacggcaaaatgcctacaaataatatgataaaacctaagtcaccgaaatatccatgct 15613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 65916 - 66010
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||||||||| |  || ||| ||||||| |||||| ||||||||||||||||| ||||||||||||  ||| |||||  ||||||||||||    
T  65916 tgcgaacaaactcataacactcaagttaatagcatacaacgacaaaatgcctacaaataatatgataaaacataagtcaccgaaatacccatgct 66010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 6204 - 6151
Alignment:
Q  363 acaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||||| ||||||| |||||||||||||||||||||||| ||||| ||||||    
T  6204 acaaaatgtctacaaataatatgataaaatctaaatcaccagaatacacatgct 6151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 409
Target Start/End: Complemental strand, 4361 - 4300
Alignment:
Q  348 taatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatac 409  Q
    |||||| || ||||||||||||| ||||||| ||||||||||||||||||||| || |||||    
T  4361 taatagcatccaatgacaaaatgtctacaaataatatgataaaatctaaatcatcaaaatac 4300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 402
Target Start/End: Original strand, 1824 - 1927
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  ||||||||||||| |  |||||| ||||||  ||||||   ||||||||||||||| |||||||||||| ||||||    
T  1824 gctaaaaacgtaaagggtgaatctgcgaacaaactcataacacccaagttaataacatacaacagcaaaatgcctacaaataatatgataaaacctaaat 1923  T
Q  399 cacc 402  Q
    ||||    
T  1924 cacc 1927  T

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Target: scaffold0445 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 402
Target Start/End: Complemental strand, 1582 - 1479
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaat 398  Q
    ||||||||| |||| |||||||  || ||||||||||||  | |||| ||||||| ||| || | ||||||||||||||| |||||||||||| ||||||    
T  1582 gctaaaaacgtaaagggtgaatctgcaaacaaactcacaacatccaagttaatagcataaaacggcaaaatgcctacaaataatatgataaaacctaaat 1483  T
Q  399 cacc 402  Q
    ||||    
T  1482 cacc 1479  T

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Target: scaffold0121 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 416
Target Start/End: Original strand, 31150 - 31242
Alignment:
Q  325 cgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    ||||||||||||||  ||||||  |||||| |  ||| ||||||||||||| ||| ||||||||||||||||| |||||  ||||||||||||    
T  31150 cgaacaaactcacagcacccaagctaatagcaagcaacgacaaaatgcctataaataatatgataaaatctaagtcaccgaaatacccatgct 31242  T

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Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 391
Target Start/End: Original strand, 71746 - 71813
Alignment:
Q  325 cgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    ||||||||||||||  |||||| ||||||| |||||| | ||||||||||||||| ||||||||||||    
T  71746 cgaacaaactcacagcacccaagttaatagcatacaacggcaaaatgcctacaaataatatgataaaa 71813  T

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Target: scaffold0634 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 413
Target Start/End: Complemental strand, 8724 - 8636
Alignment:
Q  326 gaacaaactcaca-tacccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaatctaaatcaccataatacccat 413  Q
    ||||||||||||| ||||||| ||||||| |||||| | |||||||||||| |  ||||||||||||  ||| |||||  |||||||||    
T  8724 gaacaaactcacagtacccaacttaatagcatacaacggcaaaatgcctacgattaatatgataaaacataattcaccgaaatacccat 8636  T

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Target: scaffold0128 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 416
Target Start/End: Complemental strand, 36998 - 36946
Alignment:
Q  364 caaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatgct 416  Q
    |||||| |||||||| ||||||||||||||||||||||   ||||||||||||    
T  36998 caaaatacctacaaataatatgataaaatctaaatcactgaaatacccatgct 36946  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 414
Target Start/End: Complemental strand, 38229 - 38179
Alignment:
Q  364 caaaatgcctacaaacaatatgataaaatctaaatcaccataatacccatg 414  Q
    |||||| |||||||| ||||||||||||||||| |||||  ||||||||||    
T  38229 caaaatccctacaaataatatgataaaatctaagtcaccgaaatacccatg 38179  T

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Target: scaffold0136; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 391
Target Start/End: Original strand, 9893 - 9985
Alignment:
Q  302 gctaaaaacttaaaaggtgaat--gcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaaa 391  Q
    ||||||||| |||| |||||||  |||||||||||||||  |||||| | ||||| ||| || |  |||||||||||||| ||||||||||||    
T  9893 gctaaaaacgtaaagggtgaatctgcgaacaaactcacagcacccaagtcaatagcataaaacggaaaaatgcctacaaataatatgataaaa 9985  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 410
Target Start/End: Original strand, 3957 - 4003
Alignment:
Q  364 caaaatgcctacaaacaatatgataaaatctaaatcaccataatacc 410  Q
    ||||||| ||||||| ||||||||||||| |||||||||| ||||||    
T  3957 caaaatgtctacaaataatatgataaaatttaaatcaccagaatacc 4003  T

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Target: scaffold0603 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 390
Target Start/End: Complemental strand, 7931 - 7862
Alignment:
Q  322 atgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaa 390  Q
    |||||||||||||||||  |||||| ||||||  |||||||  |||||| |||||||| |||||||||||    
T  7931 atgcgaacaaactcacaacacccaagttaataacatacaatagcaaaatccctacaaataatatgataaa 7862  T

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Target: scaffold0219 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 14745 - 14813
Alignment:
Q  323 tgcgaacaaactcacat-acccaaattaatagtatacaatgacaaaatgcctacaaacaatatgataaa 390  Q
    ||||||||||||||||  |||||| ||||||| ||| |||  |||||||| |||||| |||||||||||    
T  14745 tgcgaacaaactcacagcacccaagttaatagcatataatagcaaaatgcatacaaataatatgataaa 14813  T

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