View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11533_low_9 (Length: 293)
Name: NF11533_low_9
Description: NF11533
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11533_low_9 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 252; Significance: 1e-140; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 20 - 283
Target Start/End: Original strand, 4585947 - 4586210
Alignment:
| Q |
20 |
agtgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4585947 |
agtgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcgattaggcctctatctgaaatttcattcttaaactc |
4586046 |
T |
|
| Q |
120 |
agatgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagt |
219 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4586047 |
agatgacaaaaccaaggaaccaccaatgacaagatcaggtctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagt |
4586146 |
T |
|
| Q |
220 |
ttttctgtagtcataactgttgtgctcccaaaattcacataaacaacggacctcggttcctttg |
283 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4586147 |
ttttctgtagtcataactgttgtgctcccaaaattcacataaacaacggacctcggttcctttg |
4586210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 20 - 283
Target Start/End: Original strand, 4571283 - 4571546
Alignment:
| Q |
20 |
agtgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactc |
119 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4571283 |
agtgagtcaagaaaccaccaattgaaggatggttcaatactttctcttgcgagcaccaaccagcaattaggcctctatctgaaatttcattcacaaactc |
4571382 |
T |
|
| Q |
120 |
agatgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagt |
219 |
Q |
| |
|
||||||||||| || || ||||||||||||||||| |||||||||||||| ||||| ||||||||||||| || |||||||| ||||||||||| ||| |
|
|
| T |
4571383 |
cgatgacaaaacaactgagccaccaatgacaagatcgggcctaatgatccacaaaaagagttgcttgctatttgctaaaccccatgcaaactctaacagt |
4571482 |
T |
|
| Q |
220 |
ttttctgtagtcataactgttgtgctcccaaaattcacataaacaacggacctcggttcctttg |
283 |
Q |
| |
|
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4571483 |
ttttctgaagtcataactgtcctgctcccaaaattcacataaacaacggacctcggttcctttg |
4571546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 22 - 281
Target Start/End: Complemental strand, 4613537 - 4613278
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||||||| || ||||| | ||| ||||||||||||||||||||||||||| |||||| | |
|
|
| T |
4613537 |
tgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagctcgcgattaggcctctatctgaaatttcattcacaaactctg |
4613438 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
|||||||||| || || || ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4613437 |
atgacaaaacaactgagccgccaatgacaagatcaggcctaatgatccacaaaaagggttgcttgctattcgccaaaccccaagcaaactctaatagttt |
4613338 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaacggacctcggttcctt |
281 |
Q |
| |
|
||||| ||||||||| || ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4613337 |
ttctgcagtcataacggtcatgctcccaaaattcacataaacaacggacttcggttcctt |
4613278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 22 - 281
Target Start/End: Original strand, 4557438 - 4557697
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||| | |
|
|
| T |
4557438 |
tgagtcaagaatccaccaattgaaggatggtttaatacttgctcttgcgggcaccagcccgcgattaggcctctatctgaaatttcattgacaaactccg |
4557537 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
|||||||||| || || ||||| ||||||||||| |||||||||||||| ||||| ||||||||||||| || |||||||| ||||||||||| ||||| |
|
|
| T |
4557538 |
atgacaaaacaactgagccaccgatgacaagatcgggcctaatgatccacaaaaagggttgcttgctatttgctaaaccccatgcaaactctaacagttt |
4557637 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaacggacctcggttcctt |
281 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4557638 |
ttctgccgtcataactgtcatgctcccaaaattcacataaacaacggacctcggttcctt |
4557697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 22 - 281
Target Start/End: Original strand, 4579745 - 4580004
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| | || ||||||||||||||||||||||||||| |||||| | |
|
|
| T |
4579745 |
tgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgcggacaccagctcgttattaggcctctatctgaaatttcattcacaaactccg |
4579844 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
|||||||||| | || || || ||||||||||| |||||||||||||| ||||| ||||||||||||| || |||||||| ||||||||||| ||||| |
|
|
| T |
4579845 |
atgacaaaacagctgagccgccgatgacaagatcgggcctaatgatccacaaaaagggttgcttgctatttgctaaaccccatgcaaactctaacagttt |
4579944 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaacggacctcggttcctt |
281 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
4579945 |
ttctgcagtcataactgtcaagctcccaaaattcacataaacaacagacctaggttcctt |
4580004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 22 - 278
Target Start/End: Original strand, 4598484 - 4598740
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
||||| |||||||||||||||||||| ||||| ||||||||||||||| | ||||| | |||| || |||||||||||||||||||||| |||||| | |
|
|
| T |
4598484 |
tgagttaagaatccaccaattgaaggatggtttaatacttgctcttgcagacaccagcttgcaactaagcctctatctgaaatttcattcacaaactccg |
4598583 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
|||||||||| || || |||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||| ||||| | || |
|
|
| T |
4598584 |
atgacaaaacaaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggtttcttgctattggccaaaccccaagcaaagtctaacaactt |
4598683 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaacggacctcggttc |
278 |
Q |
| |
|
||||| |||||| || ||| ||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
4598684 |
ttctgcagtcatcaccgttatgctcccaaaattcacataaacaacagaccttggttc |
4598740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 22 - 266
Target Start/End: Original strand, 4461436 - 4461680
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| | || ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4461436 |
tgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgcggacaccagcttgctattaggcctctatctgaaatttcattcacaaactcag |
4461535 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
||||||||| | || || ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
4461536 |
atgacaaaataaacgagccgccaatgacaagatcaggcctaatgatccataaaaagggtttcttgctatcagccaaaccccaagcaaactctaacagttg |
4461635 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
266 |
Q |
| |
|
|| | |||||||||||| |||| |||||||| ||||| ||||| |
|
|
| T |
4461636 |
atcaggagtcataactgtgatgctgccaaaatttacatagacaac |
4461680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 22 - 266
Target Start/End: Complemental strand, 4514940 - 4514696
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||| |||||| || ||||||| || |||||||||||||||| |||||||||| |||||||| |
|
|
| T |
4514940 |
tgagtcaagaatccgccaattgaagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatctgcaatttcattcacaaactcag |
4514841 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
| ||||||||||| || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | ||| |
|
|
| T |
4514840 |
acgacaaaaccactgagccaccaatgacaagatcaggcctaatgatccataaaaaggttttcttgctattggccaaaccccaagcaaactctaacaattt |
4514741 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
266 |
Q |
| |
|
|| | || ||||| || |||| |||||||| ||||||||||| |
|
|
| T |
4514740 |
ctccggagacataatcgtgatgctaccaaaattaacataaacaac |
4514696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 22 - 269
Target Start/End: Original strand, 4564024 - 4564271
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| ||| || || ||||||| ||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
4564024 |
tgagtcaagaatccgccaattgaagggtggttcaatactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcag |
4564123 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
|||||||||| || || |||||||||||||| ||||||||||||||||| ||||| ||| |||| ||||||||| ||||||||||| || || |||| |
|
|
| T |
4564124 |
atgacaaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaagggtttattgcaattggccaacccccaagcaaattccaacagttg |
4564223 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaacgga |
269 |
Q |
| |
|
|| || ||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
4564224 |
ttttggtgtcataactgtaatgcttccaaaattcacataaacaacgga |
4564271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 22 - 269
Target Start/End: Original strand, 4592544 - 4592791
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||| || ||||| | ||| |||| |||||||||||||||||||||| |||||| | |
|
|
| T |
4592544 |
tgagtcaagaatccaccaattgaagggtggtttaatacttgctcttgaggacaccagctcgcgattacgcctctatctgaaatttcattcacaaactccg |
4592643 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
|||||||||| | | |||||||||||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||||||||||||||| | ||| |
|
|
| T |
4592644 |
atgacaaaacaattgtgccaccaatgacaagatcaggcctaatgatccacaaaaaaggtttattgcaattggccaaaccccaagcaaactctaacatttt |
4592743 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaacgga |
269 |
Q |
| |
|
||| | |||||||||| ||| || |||||||||||||||||||| |
|
|
| T |
4592744 |
ctcttcattcataactgtaaggctgccgaaattcacataaacaacgga |
4592791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 266
Target Start/End: Original strand, 3172052 - 3172298
Alignment:
| Q |
20 |
agtgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactc |
119 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| |||| ||||||||| ||||||| || ||||||||||||||||||||||||||| |||||| |
|
|
| T |
3172052 |
agtgagtcaagaatccgccaattgaaggatggttcaacactttctcttgcggacaccaacttgctattaggcctctatctgaaatttcattcacaaactc |
3172151 |
T |
|
| Q |
120 |
agatgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagt |
219 |
Q |
| |
|
||||||||||| || || |||||||||||||||||||||||||| ||||| ||||| ||| |||||| ||||| |||||||||||||||||||||| | |
|
|
| T |
3172152 |
cgatgacaaaacaaccgagccaccaatgacaagatcaggcctaataatccacaaaaagggtttcttgctgttggctaaaccccaagcaaactctaataat |
3172251 |
T |
|
| Q |
220 |
ttttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
266 |
Q |
| |
|
|| ||| || ||||||| | |||| |||||||| ||||||||||| |
|
|
| T |
3172252 |
ttctcttgagacataactatgatgctgccaaaatttacataaacaac |
3172298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 22 - 266
Target Start/End: Complemental strand, 4259973 - 4259729
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
||||| ||||||||||||| ||||| |||||||| ||||||||||||||| ||||| | ||| |||||||||||||| ||||||||| ||| |||||||| |
|
|
| T |
4259973 |
tgagttaagaatccaccaactgaagagtggttcagtacttgctcttgcggacaccagctcgcgattaggcctctatccgaaatttcactctcaaactcag |
4259874 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
||||||||| | ||| |||||||| | || ||||||||||||||||| ||||| ||| ||||||||||||||| ||||||||||||||||| | || |
|
|
| T |
4259873 |
atgacaaaataaaggagccaccaataatgaggtcaggcctaatgatccacaaaaagggtttcttgctattggccaatccccaagcaaactctaaaaattg |
4259774 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
266 |
Q |
| |
|
|||| |||||||||||| |||| ||||||||||| |||||||| |
|
|
| T |
4259773 |
atctggagtcataactgtaatgctgccaaaattcacgtaaacaac |
4259729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 22 - 269
Target Start/End: Original strand, 4602102 - 4602349
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||| || || |||||||||||||| |||| |||||| || ||||||| || |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4602102 |
tgagtcaagaatccgccgatcgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcatttgtaaactcag |
4602201 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
||||||||| ||| || |||||||||||||||||||||||||||||||| ||||| ||| | || |||||||||||||||||| || ||||||| || |
|
|
| T |
4602202 |
atgacaaaatcactgagccaccaatgacaagatcaggcctaatgatccacaaaaatggtttatggcaattggccaaaccccaagcgaattctaataattg |
4602301 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaacgga |
269 |
Q |
| |
|
| | ||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
4602302 |
atggggtgtcataactgtaatgctgccaaaattcacataaacaacgga |
4602349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 22 - 265
Target Start/End: Original strand, 4622455 - 4622698
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| | ||||| |||||| || |||||||| || |||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
4622455 |
tgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcag |
4622554 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
||||||||| | || || || |||||||| ||||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4622555 |
atgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatccacaaaaagggtttcttgctatcagccaaaccccaagcaaactctaatagttg |
4622654 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaa |
265 |
Q |
| |
|
||| |||||| ||||| |||| ||||||||||| ||||||| |
|
|
| T |
4622655 |
atctcgagtcatcactgtaatgctgccaaaattcacgtaaacaa |
4622698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 22 - 281
Target Start/End: Original strand, 4626264 - 4626523
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||| ||||| ||||||||| ||||| | || |||||||||||||||||||||||||||| |||||| | |
|
|
| T |
4626264 |
tgagttaagaatccaccaattgaaggatggttcagtactttctcttgcggacaccagcttgcgattaggcctctatctgaaatttcattctcaaactcgg |
4626363 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
||||| ||| | || |||||||| ||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
4626364 |
atgacgaaataaatgagccaccaatcacaagatcaggcctaatgatccacaaaaagggtttcttgctatcagccaaaccccaagcaaactctaacagttt |
4626463 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaacggacctcggttcctt |
281 |
Q |
| |
|
| || |||||||||| | ||| ||||| |||||||||||||| ||| | |||||||| |
|
|
| T |
4626464 |
ctgtggagtcataactataacgctgccaaagttcacataaacaacagactttggttcctt |
4626523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 215
Target Start/End: Original strand, 4560819 - 4561011
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
||||||||||||||||| | ||| |||||||||||||||| |||||| || ||||||| || ||||| ||||||||||||||||| ||| ||| |||| |
|
|
| T |
4560819 |
tgagtcaagaatccaccgactgatgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaa-tcag |
4560917 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaa |
215 |
Q |
| |
|
|||| |||||||| || |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
4560918 |
atgagaaaaccaccgagccaccaatgacaagatcaggcctaatgatccataaaaatggtttcttgctgttggccaaaccccaagcaaactctaa |
4561011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 283
Target Start/End: Original strand, 4574621 - 4574882
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
||||||||||||||||| | |||| ||||||||||||||| |||||| || ||||||| || ||||| ||||||||||||||||| ||| ||| |||| |
|
|
| T |
4574621 |
tgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcag |
4574720 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
|||| |||||||| || |||||||||||||||||||||||||||||||| ||||| ||| ||||| ||||||||||||||||||||||||| || || |
|
|
| T |
4574721 |
atgagaaaaccaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggttttttgctgttggccaaaccccaagcaaactctacgagctt |
4574820 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaacggacctcggttcctttg |
283 |
Q |
| |
|
||| || |||||| || |||| |||||||| ||||||||||| || || ||||| |||| |
|
|
| T |
4574821 |
ctctcgagacataacagtgatgctgccaaaatttacataaacaacagatcttggttcttttg |
4574882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 22 - 266
Target Start/End: Complemental strand, 4490174 - 4489930
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| | |||||| || ||||||| || ||||| ||||||||||||||||| ||| ||| |||| |
|
|
| T |
4490174 |
tgagtcaagaatccaccaattgaagggtgattcaataccttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcag |
4490075 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
||||||| ||| || |||||||| ||||||||||||||||||||||| ||||| ||| |||||| |||||||||||||| |||||||||||||| || |
|
|
| T |
4490074 |
atgacaacacctgtgagccaccaataacaagatcaggcctaatgatccacaaaaagggtttcttgctgttggccaaaccccatgcaaactctaatagctt |
4489975 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
266 |
Q |
| |
|
||| || |||||| || |||| |||||||| ||||||||||| |
|
|
| T |
4489974 |
ctctcgagacataacagtgatgctgccaaaatttacataaacaac |
4489930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 22 - 266
Target Start/End: Original strand, 4506170 - 4506414
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
||||||||||||||||||||||||||||| || || |||| |||||| | ||||| | || || |||| |||||||||||||||||| |||||| | |
|
|
| T |
4506170 |
tgagtcaagaatccaccaattgaagggtgatttaacactttctcttgtgaacaccagcttgctataaggcttctatctgaaatttcatttgcaaactctg |
4506269 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
| ||||||||||| || |||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| | ||| |
|
|
| T |
4506270 |
aagacaaaaccactgagccaccaattacaagatcaggcctaatgatccacaaaaagggtttcttgctattggccaaaccccaagcaaactctaaaaattt |
4506369 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
266 |
Q |
| |
|
|| | || ||||| ||| |||| |||||||||||||||||||| |
|
|
| T |
4506370 |
ctccggagacataattgtgatgcttccaaaattcacataaacaac |
4506414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 20 - 266
Target Start/End: Complemental strand, 4299642 - 4299396
Alignment:
| Q |
20 |
agtgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactc |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| ||||| || ||| | | || |||||||||||| |||||||||||||| |||||| |
|
|
| T |
4299642 |
agtgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacactagcttgcggttaggcctctatttgaaatttcattctcaaactc |
4299543 |
T |
|
| Q |
120 |
agatgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagt |
219 |
Q |
| |
|
||||||||||| | | || ||||||||||| || |||||||||||||| ||||| ||| | ||| |||||||||||||||||||| |||||| ||| |
|
|
| T |
4299542 |
agatgacaaaataaacaagccgccaatgacaaggtctggcctaatgatccacaaaaatggtttcctgcaattggccaaaccccaagcaatctctaacagt |
4299443 |
T |
|
| Q |
220 |
ttttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
266 |
Q |
| |
|
| |||| |||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
4299442 |
tgctctggagtcataactgtaacgctgccaaaattcacataaacaac |
4299396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 283
Target Start/End: Complemental strand, 4266985 - 4266724
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |||| ||||| || ||||||| || ||||| ||||||||||||||||| || ||| |||| |
|
|
| T |
4266985 |
tgagtcaagaatccaccaatcgaagggtggttcaacactttatcttgtggacaccaacttgctattagtcctctatctgaaatttctttaaaaaaatcag |
4266886 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
|||||||||| || || || ||||||||||||||||||||||| ||||| |||||| | | |||||| |||||||||||||||||||||||||| || || |
|
|
| T |
4266885 |
atgacaaaacaactgagcccccaatgacaagatcaggcctaattatccacaaaaaagggttcttgctgttggccaaaccccaagcaaactctaagagctt |
4266786 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaacggacctcggttcctttg |
283 |
Q |
| |
|
||| | ||||||||| |||| |||||||| ||||||||||| || || ||||| |||| |
|
|
| T |
4266785 |
ctctcgtgacataactgtgatgctaccaaaatttacataaacaacagatcttggttcttttg |
4266724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 239
Target Start/End: Original strand, 4470116 - 4470333
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||||||||||| || ||||| | | ||||||||||||||||||||| |||| || ||| | |
|
|
| T |
4470116 |
tgagtcaagaatccaccgattgaagggtggttcagtacttgctcttgaggacaccagttcacgattaggcctctatctgaaattccatttacaatctctg |
4470215 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
|||| ||||| || || || |||||||||||||| |||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
4470216 |
atgagaaaactaccgagccgccaatgacaagatcgggcctaatgatccacaaaaagggttgcttgctatttgccaaaccccaagcaaactctaacagttt |
4470315 |
T |
|
| Q |
222 |
ttctgtagtcataactgt |
239 |
Q |
| |
|
|||| || ||||||||| |
|
|
| T |
4470316 |
ctctggagacataactgt |
4470333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 22 - 266
Target Start/End: Original strand, 4481006 - 4481250
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||| |||| |||||| || ||||||| || ||||||||||||| ||||||||| ||| | |||||| |
|
|
| T |
4481006 |
tgagtcaagaatccgccgattgaagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatttgaaatttctttcaaatactcag |
4481105 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
||||||| ||||| || |||||||||||||||| || |||||| ||||| ||||| | || ||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
4481106 |
atgacaacaccactgagccaccaatgacaagattagacctaataatccacaaaaagttttttttgctattggcaaaaccccaagcaaactctaagagttt |
4481205 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
266 |
Q |
| |
|
||| || ||||| ||| |||| |||||||| ||||||||||| |
|
|
| T |
4481206 |
ctcttgagacataattgtgatgctgccaaaatttacataaacaac |
4481250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 22 - 266
Target Start/End: Original strand, 4617335 - 4617579
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||| |||| ||||| || ||||||| || |||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
4617335 |
tgagtcaagaatcctccgattgaagggtggttcaacactttgtcttgtggacaccaacttgctattaggcctctatctgcaatttcatttgtaaactcag |
4617434 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
|||| |||| ||| || ||||||||||||||||||||||| |||||||| ||||| || ||||| ||||||||||||||||||||| || | || || |
|
|
| T |
4617435 |
atgagaaaatcactgagccaccaatgacaagatcaggccttatgatccacaaaaatgatttcttgcaattggccaaaccccaagcaaattccagtaattg |
4617534 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
266 |
Q |
| |
|
|| | ||||||||||| |||| || ||||||||||||||||| |
|
|
| T |
4617535 |
ctcgggtgtcataactgtaatgctgccgaaattcacataaacaac |
4617579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 22 - 263
Target Start/End: Original strand, 4516634 - 4516875
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||| |||| |||||| |||||||| |||| ||||||||| ||||| | || |||| ||||||||| ||| |||||||| ||| || | |
|
|
| T |
4516634 |
tgagtcaagaatcctccaactgaaggatggttcaacactttctcttgcggacaccagcttgctattacgcctctatccgaagtttcattcacaaaatcgg |
4516733 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
||||||||| || || |||||||||||||| ||||||||||| ||||| |||||| ||| |||||| ||||||||||||||||| |||||||| |||| |
|
|
| T |
4516734 |
atgacaaaataaccgagccaccaatgacaaggtcaggcctaataatccacaaaaaaggtttcttgctgttggccaaaccccaagcgaactctaacagttg |
4516833 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaac |
263 |
Q |
| |
|
|||| |||||| || || |||| ||||||||||||||||| |
|
|
| T |
4516834 |
atctggagtcatgaccgtgatgcttccaaaattcacataaac |
4516875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 22 - 266
Target Start/End: Complemental strand, 4504216 - 4503972
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||| |||| ||||| || ||||||| || | || ||||||| ||| |||||||| ||| |||| |
|
|
| T |
4504216 |
tgagtcaagaatcctccgattgaagggtggttcaacactttatcttgtggacaccaacttgctacaagtcctctattagaagtttcattcacaaaatcag |
4504117 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
||||||| ||| | || |||||||| ||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||||||||||||| | ||| |
|
|
| T |
4504116 |
atgacaacacctctgagccaccaataacaagatcaggcctaataatccacaaaaaaggtttcttgctattggccaaaccccaagcaaactctaacaattt |
4504017 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
266 |
Q |
| |
|
||| || ||||||||| |||| |||||||| ||||||||||| |
|
|
| T |
4504016 |
atcttaagacataactgtaatgctgccaaaatttacataaacaac |
4503972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 266
Target Start/End: Complemental strand, 4256430 - 4256199
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||| | | ||||| |||||||| |||| ||||| |
|
|
| T |
4256430 |
tgagtcaagaatccaccaactgaagagtggttcagtacttgctcttgcggacaccaactctcgattagtcctctatccgaaa-------------ctcag |
4256344 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
||||||||| | ||| ||||||||||| || |||||||||||||| || ||||| ||| ||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
4256343 |
atgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatacacaaaaatggtttcttgctattggccaatccccaagcaaactctaacagttg |
4256244 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
266 |
Q |
| |
|
|||| |||||||||||| |||| ||||||||||| |||||||| |
|
|
| T |
4256243 |
atctggagtcataactgtaatgctgccaaaattcacgtaaacaac |
4256199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 283
Target Start/End: Original strand, 4457907 - 4458169
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||| |||| ||||| || ||||||| || |||| ||||||||| ||| |||||||| ||| || | |
|
|
| T |
4457907 |
tgagtcaagaatcctccgattgaagggtggttcaacactttatcttgtggacaccaacttgctattaagcctctatcagaagtttcattcacaaaatccg |
4458006 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatg-ttgcttgctattggccaaaccccaagcaaactctaatagtt |
220 |
Q |
| |
|
|||||||||| || || |||||||||||||||||||||||| | ||||| |||||| | || |||||| ||||||||| |||||||||| ||||| || | |
|
|
| T |
4458007 |
atgacaaaacaaccgagccaccaatgacaagatcaggcctagttatccacaaaaaaggttttcttgctgttggccaaaacccaagcaaattctaagagct |
4458106 |
T |
|
| Q |
221 |
tttctgtagtcataactgttgtgctcccaaaattcacataaacaacggacctcggttcctttg |
283 |
Q |
| |
|
| ||| || ||||||||| |||| |||||||| ||||||| ||| ||| | ||||| |||| |
|
|
| T |
4458107 |
tctcttgagacataactgtgatgcttccaaaatttacataaataacagactttggttcttttg |
4458169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 22 - 263
Target Start/End: Original strand, 4568369 - 4568607
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
||||||||||||| |||| ||||||||||||||| |||||||||||||| ||||| | || ||| |||||||||| ||| || ||||| |||||| | |
|
|
| T |
4568369 |
tgagtcaagaatcgtccaactgaagggtggttcaacacttgctcttgcggacaccagcttgctatttggcctctatccgaagttccattcacaaactcgg |
4568468 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
||||||||| || || |||||||||||||| | ||||||||||||||| |||||| ||| |||||| ||||| ||||| |||| |||||||| | |
|
|
| T |
4568469 |
atgacaaaataactgagccaccaatgacaagctaaggcctaatgatccacaaaaaaggtttcttgctgttggcaaaacctcaagagaactctaa---ctg |
4568565 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaac |
263 |
Q |
| |
|
|||| ||||||||| | ||||| ||||||||||||||||| |
|
|
| T |
4568566 |
ctctggagtcataaccatagtgcttccaaaattcacataaac |
4568607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 4493268 - 4493346
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctg |
100 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||| | || |||||| || ||||||| ||||||||||||||||||| |
|
|
| T |
4493268 |
tgagtcaagaatccaccaatcgaatggtggttcagcagtttctcttgtggacaccaactagcaattaggcctctatctg |
4493346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 4391940 - 4391794
Alignment:
| Q |
28 |
aagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgc----aattaggcctctatctgaaatttcattcttaaactcagat |
123 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||||| ||| ||||| | || | ||| |||||||||||||||||||||| | ||||| || |
|
|
| T |
4391940 |
aagaatccacaaattcaagggtggttcaatacttgctctttcggacaccatcttgcgactagatagacctctatctgaaatttcattctcatactcatat |
4391841 |
T |
|
| Q |
124 |
gacaaaaccacggaaccaccaatgacaagatcaggcctaatgatcca |
170 |
Q |
| |
|
||||||| || | ||||||||||| ||| ||||||||||||| |
|
|
| T |
4391840 |
aacaaaacacatgacctgccaatgacaaggtcaagcctaatgatcca |
4391794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 184; Significance: 1e-99; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 22 - 281
Target Start/End: Complemental strand, 16686086 - 16685827
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||| | ||| ||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
16686086 |
tgagttaagaatccaccgattgaaggatggtttaatacttgctcttgcgggcaccagctcgcgattaggcttctatctgagatttcattcttaaactcag |
16685987 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
16685986 |
atgacaaaaccacggaaccgcaaatgacaagatcagacctaatgatccattgaaaatgttgcttgctattggtcaaaccccaagcaaactctaatagttt |
16685887 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaacggacctcggttcctt |
281 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16685886 |
ttctgcagtcataactgtcatgctcccaaaattcacataaacaacggaactcggttcctt |
16685827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 20 - 266
Target Start/End: Original strand, 1674537 - 1674783
Alignment:
| Q |
20 |
agtgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactc |
119 |
Q |
| |
|
|||| ||||||||||| || ||||||||||||||||| |||| |||||| || |||||| | ||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
1674537 |
agtgtgtcaagaatccgccgattgaagggtggttcaacactttctcttgtggacaccaatttgatattaggcctctatctgaaatttctttcataaactc |
1674636 |
T |
|
| Q |
120 |
agatgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagt |
219 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||||| ||||||| |||||| ||| ||||| || ||||||||||||||||||||| |||||| |
|
|
| T |
1674637 |
agatgacaaaaccactgagccaccaatgacaagatcaggcctagtgatccacaaaaaaggtttcttgcaatcggccaaaccccaagcaaactccaatagt |
1674736 |
T |
|
| Q |
220 |
ttttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
266 |
Q |
| |
|
| |||| ||||||||| | |||| || ||||||||||||||||| |
|
|
| T |
1674737 |
tgatctggagtcataacaataatgctaccgaaattcacataaacaac |
1674783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 31 - 265
Target Start/End: Complemental strand, 20863653 - 20863419
Alignment:
| Q |
31 |
aatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcagatgacaaaa |
130 |
Q |
| |
|
||||||||||||||||| |||||||| || | |||||| || ||||||| ||| ||||||||||||||||||||||||||| |||| ||||||| |||| |
|
|
| T |
20863653 |
aatccaccaattgaaggatggttcaacaccttctcttgtggacaccaactcgcgattaggcctctatctgaaatttcattcacaaacgcagatgaaaaaa |
20863554 |
T |
|
| Q |
131 |
ccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagtttttctgtagt |
230 |
Q |
| |
|
||| || |||||||||||||||||||||||||||||||| ||||| ||| |||||| |||||||||||||| ||||||||||| | ||||||| || |
|
|
| T |
20863553 |
tcaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggtttcttgctgttggccaaaccccatgcaaactctaacaatttttctacaga |
20863454 |
T |
|
| Q |
231 |
cataactgttgtgctcccaaaattcacataaacaa |
265 |
Q |
| |
|
||| ||||| || || |||||||| ||||| |||| |
|
|
| T |
20863453 |
catgactgtggtactgccaaaatttacatatacaa |
20863419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 22 - 266
Target Start/End: Original strand, 3086733 - 3086977
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | || ||||| ||||||||||||||||| |||| |||||||| |
|
|
| T |
3086733 |
tgagtcaagaatccaccaattgaagggtgattcaatacttgctcttgcggacaccagcttgcgattagacctctatctgaaatttctttctcaaactcag |
3086832 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
|||||| || | ||| || ||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3086833 |
atgacataataaaggagccgccaatgacaagatcaggcctaatgatccacaaaaatggtttcttgctattggccaaaccccaagcaaactctaatagttg |
3086932 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
266 |
Q |
| |
|
||| |||||||||||| |||| |||||| ||||||||||||| |
|
|
| T |
3086933 |
ctcttgagtcataactgtaatgctgccaaaactcacataaacaac |
3086977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 22 - 266
Target Start/End: Complemental strand, 4505 - 4261
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||| || ||||| | |||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4505 |
tgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactcag |
4406 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
||||||||| | || || ||||||||||| ||||||||||||||||| ||||| || ||| | ||||| |||| |||||||||||||||| |||| |
|
|
| T |
4405 |
atgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaacccaagcaaactctaacagttg |
4306 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
266 |
Q |
| |
|
|||| |||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
4305 |
atctggagtcataactgtaatgcttccaaaattcacataaacaac |
4261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 22 - 281
Target Start/End: Original strand, 1281427 - 1281686
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||| |||||| || ||||||| || ||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
1281427 |
tgagtcaagaatccaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcgcaaagtcag |
1281526 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
||||||||| ||| || || ||||||||||||||||||||| ||||||| ||||| ||| ||||||||| |||| |||||||||||| || |||| |
|
|
| T |
1281527 |
atgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattcctgaagttg |
1281626 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaacggacctcggttcctt |
281 |
Q |
| |
|
|||| |||||||||||| |||| || ||||||||||||||||| || ||||||||||| |
|
|
| T |
1281627 |
ctctggagtcataactgtaatgcttccgaaattcacataaacaacagatctcggttcctt |
1281686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 22 - 266
Target Start/End: Complemental strand, 3538 - 3294
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||||||||||| || ||||| | | |||||||||||||||||||||||||||| ||| || | |
|
|
| T |
3538 |
tgagtcaagaatccaccaattgaagggtggatcagtacttgctcttgtggacaccagcttgtgattaggcctctatctgaaatttcattctcaaattctg |
3439 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
||||||||| | || || ||||||||||||||||||||||||||||| ||||| ||| |||||||| |||||||||||||||||| ||||| |||| |
|
|
| T |
3438 |
atgacaaaataaacgagccgccaatgacaagatcaggcctaatgatccacaaaaacggtttcttgctatcggccaaaccccaagcaaattctaacagttg |
3339 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaac |
266 |
Q |
| |
|
| || |||||||||||| |||| || ||||||||||||||||| |
|
|
| T |
3338 |
atttggagtcataactgtaatgctgccgaaattcacataaacaac |
3294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 22 - 283
Target Start/End: Original strand, 24103312 - 24103573
Alignment:
| Q |
22 |
tgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactcag |
121 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| || |||| ||||| || ||||||| || ||||| ||||||||||||| ||| || ||| |||| |
|
|
| T |
24103312 |
tgagtcaagaatccaccaatcgaagggtggtttaacactttatcttgtggacaccaacttgctattagtcctctatctgaaacttctttaaaaaaatcag |
24103411 |
T |
|
| Q |
122 |
atgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagttt |
221 |
Q |
| |
|
|||||||||| || || || ||||||||||||||||||||||| ||||| |||||| | | ||||||||||||||||||||||||||||||||| || || |
|
|
| T |
24103412 |
atgacaaaacaactgagcccccaatgacaagatcaggcctaattatccacaaaaaagggttcttgctattggccaaaccccaagcaaactctaagagctt |
24103511 |
T |
|
| Q |
222 |
ttctgtagtcataactgttgtgctcccaaaattcacataaacaacggacctcggttcctttg |
283 |
Q |
| |
|
||| | ||||||||| |||| |||||||| ||||||||||| || || ||||| |||| |
|
|
| T |
24103512 |
ctctcgtgacataactgtgatgctaccaaaatttacataaacaactgatcttggttcttttg |
24103573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 20 - 195
Target Start/End: Complemental strand, 27999920 - 27999745
Alignment:
| Q |
20 |
agtgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcaattaggcctctatctgaaatttcattcttaaactc |
119 |
Q |
| |
|
||||||||||||| || | ||||||||||||||||| |||| |||||| || |||||| | ||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
27999920 |
agtgagtcaagaacccgctgattgaagggtggttcaaaactttctcttgtggacaccaatttgatattaggcctctatctgaaatttctttcctaaactc |
27999821 |
T |
|
| Q |
120 |
agatgacaaaaccacggaaccaccaatgacaagatcaggcctaatgatccataaaaaatgttgcttgctattggcc |
195 |
Q |
| |
|
||||||||||||||| || |||||||||||||||| ||||||| ||||||| |||||| ||| ||||| ||||||| |
|
|
| T |
27999820 |
agatgacaaaaccactgagccaccaatgacaagattaggcctagtgatccacaaaaaaggtttcttgcaattggcc |
27999745 |
T |
|
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