View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11534_low_5 (Length: 504)
Name: NF11534_low_5
Description: NF11534
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11534_low_5 |
 | |
|
| [»] scaffold0044 (1 HSPs) |
| | |
|
| [»] scaffold0009 (1 HSPs) |
| | |
|
| [»] scaffold0027 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0044 (Bit Score: 470; Significance: 0; HSPs: 1)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Complemental strand, 48988 - 48503
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
48988 |
tttggagcacaagacctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacataaggaattgaaga |
48889 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48888 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
48789 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48788 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
48689 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48688 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
48589 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
48588 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
48503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 470; Significance: 0; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Complemental strand, 201807 - 201322
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
201807 |
tttggagcacaagatttgttggaaattgtgcaggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
201708 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
201707 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
201608 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
201607 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
201508 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
201507 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
201408 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
201407 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
201322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Complemental strand, 316644 - 316159
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
316644 |
tttggagcacaagatttgttggaaattgtgcaggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
316545 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
316544 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
316445 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
316444 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
316345 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
316344 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
316245 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
316244 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
316159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Complemental strand, 30409926 - 30409441
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30409926 |
tttggagcacaagatttgttggaaattgtgcaggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
30409827 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30409826 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
30409727 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30409726 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
30409627 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30409626 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
30409527 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
30409526 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
30409441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Complemental strand, 43811606 - 43811121
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43811606 |
tttggagcacaagatctgttggaaattttgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
43811507 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43811506 |
agaaagattgcaaggctctgttcttgattcaacaaagccttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
43811407 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
43811406 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgaattgatgcaaatggaagatgatcagaag |
43811307 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43811306 |
atttctgaatacatctctaaactcattaatcttgtgaatcagatgaaggcttgtagtgaagcaatcactgatcaacagatagttgaaaagattatgagga |
43811207 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
43811206 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcgaaagatgttaagacattgaagattgaggagctgcagagt |
43811121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Original strand, 41945850 - 41946335
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
|||| |||||||||| || |||||||||||||| |||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
41945850 |
tttgaagcacaagatttgctggaaattgtgcagaatggtgtagatgaattagctgcgaataccactgatgtgcaaaggaacgcacacaaggaattgaaga |
41945949 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||| |
|
|
| T |
41945950 |
agaaagattgcaaggctcttttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaaacagttagttcaaaggaagcatgggacat |
41946049 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| || | |||||||||||||||||| | ||||||||||||||| || |
|
|
| T |
41946050 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatcactacggaggaaatttgagctgatgtagatggaagatgatcaggag |
41946149 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|| ||| | ||||| || |||||||| ||||||||||||||||||||||||||||||||||| || | |||||||||||||||| | ||||||||||||| |
|
|
| T |
41946150 |
atctctaaatacatttccaaactcataaatcttgtgaatcagatgaaggcttgtagtgaagccattagtgatcaacagatagtttagaagattatgagga |
41946249 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
41946250 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
41946335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 86 - 482
Target Start/End: Original strand, 28647027 - 28647423
Alignment:
| Q |
86 |
cacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttc |
185 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28647027 |
cacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttc |
28647126 |
T |
|
| Q |
186 |
aaaggaagcatgggacattctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaa |
285 |
Q |
| |
|
| | ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| || |||||||||||||| ||||||||| |
|
|
| T |
28647127 |
acaagaagcataggacattctttcaaagtatcatgaaggtgatgataaagtgaaattgattaagcttcaataactaagaaggaaatttgaactgatgcaa |
28647226 |
T |
|
| Q |
286 |
atggaagatgatcagaagatttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatag |
385 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
28647227 |
atggaagatgatcagaagatttctgaatacatctctaaacacatcaatcttgtgaatcagatgaaggcttgtagtgaagcaatcactgatcaacagatag |
28647326 |
T |
|
| Q |
386 |
ttgaaaagattatgaggaccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagct |
482 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
28647327 |
ttgaaaagattatgaggaccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaagagct |
28647423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 50 - 489
Target Start/End: Original strand, 1287407 - 1287846
Alignment:
| Q |
50 |
aattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatga |
149 |
Q |
| |
|
|||||| || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
1287407 |
aattagttgagaatgccactgaggtgcaaaggaacgcacacaaggaatataagaagaaagattgcaaggctttgttcttgattcaacaaagtcttgatga |
1287506 |
T |
|
| Q |
150 |
aggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacattctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaa |
249 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||| | |||||| |
|
|
| T |
1287507 |
aggaaactttgaaagaatctcaaaatcattaagttcaaatgaagcataggacattctttcaaagtatcatgaaggtgatgataaggtgaaatcgattaag |
1287606 |
T |
|
| Q |
250 |
cttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctgagtacatctctaaactcatcaatcttgtgaatcagatga |
349 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1287607 |
cttcaatcactgagaaagaaatttgagctgatgtagatggaagatgatcagaagatttctgaatacatctctaaactcatcaatcttgtgaatcagatga |
1287706 |
T |
|
| Q |
350 |
aggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgaggaccctatcttcaaggtttgatttcattgtggtggcaattcaggaatc |
449 |
Q |
| |
|
||||||||||||| ||||||||| || |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
1287707 |
aggcttgtagtgaggctatcactaattaacaaatagttgaaaagattatgaggaccatatcttcaaggtttgatttcattgtagtaccaattcaggaatc |
1287806 |
T |
|
| Q |
450 |
aaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
||| ||||| |||||||| ||||||||||| |||||||| |
|
|
| T |
1287807 |
aaaggatgtgaagacattgaagattgaggaattgcagagt |
1287846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 65 - 357
Target Start/End: Complemental strand, 44913251 - 44912959
Alignment:
| Q |
65 |
ctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaag |
164 |
Q |
| |
|
||||||||||||| ||||| ||| |||| ||||| |||||||| || |||||||| || ||||| |||||||||||| | ||| |||||| |||||||| |
|
|
| T |
44913251 |
ctactgaggtgcagaggaatgcatacaaagaatttaagaagaaggactgcaaggcacttttcttcattcaacaaagtgtagattcaggaaattttgaaag |
44913152 |
T |
|
| Q |
165 |
aatctcaaaat-cactgagttcaaaggaagcatgggacattctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgag |
263 |
Q |
| |
|
||||||||||| ||| || || ||||| || | ||| |||||| || | | |||||||||||| ||| ||||| ||| || ||||| ||| | || |
|
|
| T |
44913151 |
aatctcaaaatccacaaag-tctaaggaggctttggatattcttgaaagatgttatgaaggtgatgctaaggtgaaagagataaagcttcagtctttaag |
44913053 |
T |
|
| Q |
264 |
aaggaaatttgagctgatgcaaatggaagatgatcagaagatttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgt |
357 |
Q |
| |
|
||| || ||||| ||||||||||||||||||| || |||||| ||| |||||||| ||||| | ||| |||| |||||||||||||||||| |
|
|
| T |
44913052 |
aagaaagtttgaaatgatgcaaatggaagatgagcaaaagattgttgattacatctccaaactgaataatgttgtaaatcagatgaaggcttgt |
44912959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 185 - 351
Target Start/End: Complemental strand, 10683531 - 10683365
Alignment:
| Q |
185 |
caaaggaagcatgggacattctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgca |
284 |
Q |
| |
|
|||||||||||||||| || || | |||||| |||||||||||| || |||||| ||| || ||||| ||||| |||||||||||| | |||||||| |
|
|
| T |
10683531 |
caaaggaagcatgggatatactagaagagtatcgtgaaggtgatgaaaaggtgaagcagatcaagcttcagtctctaagaaggaaatttaaactgatgca |
10683432 |
T |
|
| Q |
285 |
aatggaagatgatcagaagatttctgagtacatctctaaactcatcaatcttgtgaatcagatgaag |
351 |
Q |
| |
|
|||||||||||| | || ||| ||| ||||| || ||||| || ||| || | |||||||||||| |
|
|
| T |
10683431 |
gatggaagatgataaaaaaattgttgattacatatccaaactgattaatattttcaatcagatgaag |
10683365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 470; Significance: 0; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Complemental strand, 7103497 - 7103012
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7103497 |
tttggagcacaagatttgttggaaattgtgcaggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
7103398 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7103397 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
7103298 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7103297 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
7103198 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7103197 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
7103098 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7103097 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
7103012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Original strand, 16794703 - 16795188
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16794703 |
tttggagcacaagatttgttggaaattgtgcaggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
16794802 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16794803 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
16794902 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16794903 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
16795002 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16795003 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
16795102 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
16795103 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
16795188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Original strand, 12019323 - 12019808
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
12019323 |
tttggagcacaagacctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacataaggaattgaaga |
12019422 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12019423 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
12019522 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
12019523 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgaattgatgcaaatggaagatgatcagaag |
12019622 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12019623 |
atttctgaatacatctctaaactcattaatcttgtgaatcagatgaaggcttgtagtgaagcaatcactgatcaacagatagttgaaaagattatgagga |
12019722 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12019723 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
12019808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 450; E-Value: 0
Query Start/End: Original strand, 4 - 485
Target Start/End: Original strand, 37659261 - 37659742
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37659261 |
tttggagcacaagacctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
37659360 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37659361 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
37659460 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
37659461 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgaattgatgcaaatggaagatgatcagaag |
37659560 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37659561 |
atttctgaatacatctctaaactcattaatcttgtgaatcagatgaaggcttgtagtgaagcaatcactgatcaacagatagttgaaaagattatgagga |
37659660 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgca |
485 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
37659661 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgca |
37659742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Original strand, 30695830 - 30696315
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| || | |||||||||||| || ||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
30695830 |
tttggagcacaagatttgcttgaaattgtgcagaatagtgtaggtgaattagctgcgaatgccactgaagtgcaaaggaacgcacacaaggaattgaaga |
30695929 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30695930 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactaagttcaaaggaagcatgggacat |
30696029 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30696030 |
tctttcaaagtaccatgaaggtgatgataaagtgaagttgattaagcttcaatcactgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
30696129 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30696130 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagcaatcactgatcaacagatagttgaaaagattatgagga |
30696229 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
30696230 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagccgcagagt |
30696315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Complemental strand, 40371370 - 40370885
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| || | |||||||||||| |||||||| |||||||||||||||||| ||||| || |||||||||||||||||||||||||||| |
|
|
| T |
40371370 |
tttggagcacaagatttgcttgaaattgtgcagaatggtgtaggtgaattagctgcgaatgccactgaagtacaaaggaacgcacacaaggaattgaaga |
40371271 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40371270 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
40371171 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
40371170 |
tctttcaaagtaccatgaaggtgatgataaagtgaaattgattaagcttcagtcactgagaaggaaatttgaactgatgcaaatggaagatgatcagaag |
40371071 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40371070 |
atttctgaatacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagcaatcactgatcaacagatagttgaaaagattatgagga |
40370971 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
40370970 |
ccctatcttcaaggtttgatttcattatggtagcaattcaggaatcaaaagatgttaagacattggagattgaggagctgcagagt |
40370885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Original strand, 10275071 - 10275556
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10275071 |
tttggagcacaagatctgttggaaattgtgcagaatggtgtagatgaattagctgcgaatgccactgaggtgcaaaggaacgcacacaaggagttgaaga |
10275170 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||| ||||| |
|
|
| T |
10275171 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaaacagttagttcaaaggaagcatgagacat |
10275270 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10275271 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatcactaagaaggaaatttgagctgatgcagatggaagatgatcagaag |
10275370 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
10275371 |
atttctgaatacatctctaaactcatcaatcttgtgtatcagatgaaggcttgtagtgaagctatcactgatcaaaagatagttgaaaagattatgagga |
10275470 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||| |||||||| ||||| |||||||| ||||||||||| |||||||| |
|
|
| T |
10275471 |
ccctatcttcaaggtttgatttcattgtggtagtaattcatgaatcaaaggatgtgaagacattgaagattgaggaattgcagagt |
10275556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 76 - 232
Target Start/End: Complemental strand, 15066859 - 15066703
Alignment:
| Q |
76 |
caaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaat |
175 |
Q |
| |
|
|||||||| || ||||| ||||| |||||||| ||| | |||||| ||||| |||||||||||||||||||||||||||||||||||||||| | |||| |
|
|
| T |
15066859 |
caaaggaatgcgcacaaagaattaaagaagaaggatcgtaaggctttgttcctgattcaacaaagtcttgatgaaggaaactttgaaagaattttgaaat |
15066760 |
T |
|
| Q |
176 |
cactgagttcaaaggaagcatgggacattctttcaaagtatcatgaaggtgatgata |
232 |
Q |
| |
|
| || ||||||||||| ||||| |||||| |||||||||| |||||||||||| |
|
|
| T |
15066759 |
ccacaagatcaaaggaagcttgggatattcttgaaaagtatcattaaggtgatgata |
15066703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 214 - 458
Target Start/End: Complemental strand, 16598287 - 16598043
Alignment:
| Q |
214 |
tatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctgagt |
313 |
Q |
| |
|
|||| |||||| ||||| || ||||||| ||| || ||||| ||| | ||||||||||||| | |||||||||||||||| ||||||||| ||| | |
|
|
| T |
16598287 |
tatcgtgaaggagatgaaaaggtgaagtagataaagcttcactctttatgaaggaaatttgaatagttgcaaatggaagatgagcagaagattgttgatt |
16598188 |
T |
|
| Q |
314 |
acatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgaggaccctatcttc |
413 |
Q |
| |
|
|||||||||| | || ||| ||| |||| ||||||||| || |||||| |||| | |||| ||| || ||||| ||||| ||||| || |||||| |
|
|
| T |
16598187 |
acatctctaagatgattaatgttgaaaatcggatgaaggcatggagtgaaactatttcagatccacaaattgttgagaagatcatgagaactctatctct |
16598088 |
T |
|
| Q |
414 |
aaggtttgatttcattgtggtggcaattcaggaatcaaaagatgt |
458 |
Q |
| |
|
||||||||||||||| || |||| || || ||||| |||||||| |
|
|
| T |
16598087 |
aaggtttgatttcatagtagtggacatacaagaatcgaaagatgt |
16598043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 319
Target Start/End: Original strand, 30048062 - 30048167
Alignment:
| Q |
214 |
tatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctgagt |
313 |
Q |
| |
|
||||||||||| ||||| || |||||| ||| || |||| ||| | |||||||||||| || |||||||||||||||| || || |||||| ||| | |
|
|
| T |
30048062 |
tatcatgaaggagatgagaaggtgaaggagataaagcttcggtctttaagaaggaaatttaagttgatgcaaatggaagaggagcaaaagattcttgatt |
30048161 |
T |
|
| Q |
314 |
acatct |
319 |
Q |
| |
|
|||||| |
|
|
| T |
30048162 |
acatct |
30048167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 470; Significance: 0; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Original strand, 8051426 - 8051911
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8051426 |
tttggagcacaagatttgttggaaattgtgcaggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
8051525 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8051526 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
8051625 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8051626 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
8051725 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8051726 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
8051825 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
8051826 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
8051911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Original strand, 36671085 - 36671570
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36671085 |
tttggagcacaagatttgttggaaattgtgcaggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
36671184 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36671185 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
36671284 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36671285 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
36671384 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36671385 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
36671484 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
36671485 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
36671570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Complemental strand, 13270651 - 13270166
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
13270651 |
tttggagcacaagatctgttggaaattgtgcaaaatggtgtagatgaattagctgcgaatgccactgaggtgcaaaggaacacacacaaggaattgaaga |
13270552 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| || | ||||||||||||||||||||||| |
|
|
| T |
13270551 |
agaaagattgcaaggctctgttctttattcaacaaagtcttgatgaaggaaactttgaaagaatatcaaaaacaattagttcaaaggaagcatgggacat |
13270452 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
13270451 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatcactgagaaggaaatttgagctgatgcaaatggaagatgattagaag |
13270352 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
13270351 |
atttctgaatacatctctaaactcatcaatcttgtgaatcaggtgaaggcttgtagtgaagctatcattgatcaacaaatagttgaaaagattatgagga |
13270252 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| || |||||||| |
|
|
| T |
13270251 |
ccctatcttcaaggtttgatttcattgtggtagcaattcaggaatcaaaagatgtgaagacattgaagattgaagaattgcagagt |
13270166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 232 - 489
Target Start/End: Complemental strand, 35953987 - 35953730
Alignment:
| Q |
232 |
aaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctgagtacatctctaaactcatca |
331 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
35953987 |
aaagtaaagttgattaagcttcaatcactgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctgaatacatctctaaactcatca |
35953888 |
T |
|
| Q |
332 |
atcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgaggaccctatcttcaaggtttgatttcattgt |
431 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35953887 |
atcttgtgaattagatgaaggcttgtagtgaagctatcactgatcaacaaatagttgaaaagattatgaggaccctatcttcaaggtttgatttcattgt |
35953788 |
T |
|
| Q |
432 |
ggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
||| ||||||||||||||||| ||||| |||||||| ||||||||||| |||||||| |
|
|
| T |
35953787 |
ggtagcaattcaggaatcaaaggatgtgaagacattgaagattgaggaattgcagagt |
35953730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 100 - 475
Target Start/End: Original strand, 17255915 - 17256285
Alignment:
| Q |
100 |
aagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatggg |
199 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| | |||||||| |||||| |||||||||||||||| ||| | |||| |||||||||||| | |
|
|
| T |
17255915 |
aagaagaaagattgcaaggctttgttcttgattcaaaatagtcttga---aggaaattttgaaagaatctcaa--tcaattagttgaaaggaagcatgag |
17256009 |
T |
|
| Q |
200 |
acattctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatca |
299 |
Q |
| |
|
| |||||| |||||||||| |||||||||||||| |||||||||||||| |||||||| ||||| ||||| ||||| ||||| | ||||| || || || |
|
|
| T |
17256010 |
atattcttgcaaagtatcacgaaggtgatgataaggtgaagttgattaagcttcaatcactgaggaggaagtttgaattgatgtagatggaggaggagca |
17256109 |
T |
|
| Q |
300 |
gaagatttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatg |
399 |
Q |
| |
|
|||||| |||||||||||| |||||||||||| || |||||| |||||||||||| | |||| || |||||||||| || ||||| ||||| ||| |
|
|
| T |
17256110 |
taagattgttgagtacatctccaaactcatcaatatttggaatcacatgaaggcttgtggggaagtaatttctgatcaacaaattgttgagaagatcatg |
17256209 |
T |
|
| Q |
400 |
aggaccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattg |
475 |
Q |
| |
|
||||| | ||||||||||||||||| ||||| || |||||||| ||||| || ||||| || || || ||||||| |
|
|
| T |
17256210 |
aggacattgtcttcaaggtttgattttattgttgtagcaattcaagaatctaaggatgtgaaaaccttgaagattg |
17256285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 42515303 - 42515377
Alignment:
| Q |
181 |
agttcaaaggaagcatgggacattctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatc |
257 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||||| |
|
|
| T |
42515303 |
agttcaaaggaagcatgggacattctttcaaagtatcatgaaggtgatgataaggt--aattgattaagcttcaatc |
42515377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 29769069 - 29769176
Alignment:
| Q |
8 |
gagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaa |
107 |
Q |
| |
|
||||| ||||| || | |||||||||||| | |||||| ||| |||||| |||||| || ||||||||||||||||||||| | |||||||||| |
|
|
| T |
29769069 |
gagcataagatttgcttgaaattgtgcagaacggtgtaggtgatttagctatgaatgccacaagagtgcaaaggaacgcacacaagaatctgaagaagaa |
29769168 |
T |
|
| Q |
108 |
agattgca |
115 |
Q |
| |
|
|||||||| |
|
|
| T |
29769169 |
agattgca |
29769176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 466; Significance: 0; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Complemental strand, 7944206 - 7943721
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
7944206 |
tttggagcacaagatttgttggaaattgtgcaggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacaaaaggaattgaaga |
7944107 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7944106 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
7944007 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7944006 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
7943907 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7943906 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
7943807 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7943806 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
7943721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Original strand, 27757431 - 27757916
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| || | |||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27757431 |
tttggagcacaagatttgcttgaaattgtgcagaatggtgtagatgaattagctgcgaatgccactgaagtgcaaaggaacgcacacaaggaattgaaga |
27757530 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
27757531 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggatat |
27757630 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27757631 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
27757730 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27757731 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcgtgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
27757830 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
27757831 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagttgcagagt |
27757916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 4 - 257
Target Start/End: Complemental strand, 7466163 - 7465907
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| || | |||||||| ||| |||||||| |||||||| | |||||| ||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
7466163 |
tttggagcacaagatttgcttgaaattgttcagaatggtgtaggtgaattagttttgaatgccactgatgtgcaaaggaacacacacaaggaattgaaga |
7466064 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaac---tttgaaagaatctcaaaatcactgagttcaaaggaagcatggga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
7466063 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactaatttaaaagaatctcaaaatcattgagttcaaaggaagcatggga |
7465964 |
T |
|
| Q |
201 |
cattctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatc |
257 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7465963 |
cattctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatc |
7465907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 215 - 452
Target Start/End: Original strand, 730353 - 730590
Alignment:
| Q |
215 |
atcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctgagta |
314 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||| ||||| ||| |||||||||| ||||| ||||||| ||||| || || || || ||| |||| || |
|
|
| T |
730353 |
atcatgaaggcgatgataaggtgaagttgattaagcttcagtctttgagaaggaagtttgaattgatgcagatggaggaagagcaaaatattgctgaata |
730452 |
T |
|
| Q |
315 |
catctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgaggaccctatcttca |
414 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||||||||| | ||||| || ||||||||||| || ||||| || || ||||| || ||||| ||| |
|
|
| T |
730453 |
tatctccaaactcatcaatattgtgaatcagatgaaggcttgtggagaagcaatgactgatcaacaaattgttgagaaaatgatgagaacactatcatca |
730552 |
T |
|
| Q |
415 |
aggtttgatttcattgtggtggcaattcaggaatcaaa |
452 |
Q |
| |
|
|| |||||||| || ||||| |||||||| |||||||| |
|
|
| T |
730553 |
agatttgattttatagtggttgcaattcaagaatcaaa |
730590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 53 - 219
Target Start/End: Original strand, 729900 - 730064
Alignment:
| Q |
53 |
tagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaagg |
152 |
Q |
| |
|
||||||||||||| ||||| | |||||||| | ||||| || ||||||||||||||||||||||| | ||| ||||||||| ||||| |||||||| |
|
|
| T |
729900 |
tagctgcgaatgcaactgaaattcaaaggaatgtgcacaaagatctgaagaagaaagattgcaaggctttattcctgattcaac--agtctggatgaagg |
729997 |
T |
|
| Q |
153 |
aaactttgaaagaatctcaaaat-cactgagttcaaaggaagcatgggacattctttcaaagtatcat |
219 |
Q |
| |
|
||| ||||||||||||||||||| |||| ||||||||||||| ||||| ||| |||| ||||||||| |
|
|
| T |
729998 |
aaattttgaaagaatctcaaaatccact-agttcaaaggaagtttgggatattatttctaagtatcat |
730064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 458; Significance: 0; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Original strand, 44147592 - 44148077
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44147592 |
tttggagcacaagatttgttggaaattgtgcaggatggtatacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
44147691 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44147692 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
44147791 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44147792 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
44147891 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
44147892 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcagcagatagttgaaaagattatgagga |
44147991 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
44147992 |
ccctatcttcaaggtttgatttcattgtgatggcaactcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
44148077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 1 - 489
Target Start/End: Original strand, 27186670 - 27187158
Alignment:
| Q |
1 |
ctatttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
27186670 |
ctatttggagcacaagatctgttggaaattatgcagaatggtgtagatgaattagctatgaatgccactgaggtgcaaaggaacgcacacaaggaattga |
27186769 |
T |
|
| Q |
101 |
agaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatggga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | || ||||||||||||||||| |
|
|
| T |
27186770 |
agaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaaacagttagatcaaaggaagcatggga |
27186869 |
T |
|
| Q |
201 |
cattctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcag |
300 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
27186870 |
cattctttcaaagtatcatgaaggtggtgataaagtgaagttgattaagcttcaatcactgagaaggaaatttgagctggtgcaaatggaagatgatcag |
27186969 |
T |
|
| Q |
301 |
aagatttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatga |
400 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
27186970 |
aagatttctgaatacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacatatagttgaaaagattatga |
27187069 |
T |
|
| Q |
401 |
ggaccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||| |||||||| |||||||| ||||| |||||||| ||||||||||| |||||||| |
|
|
| T |
27187070 |
ggactctatcttcaaggtttaatttcattgtggtagcaattcaagaatcaaaggatgtgaagacattgaagattgaggaattgcagagt |
27187158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Original strand, 31355213 - 31355698
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| || |||||||||||||| |||||||| |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
31355213 |
tttggagcacaagatttgctggaaattgtgcagaatggtgtagatgaattagctgtgaatgccactaaggtgcaaaggaacgcacacaaggaattgaaga |
31355312 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
31355313 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttggaagaatctcaaaatcattgagttcaaaggaagcatgggacat |
31355412 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
31355413 |
tctttcaaagtatcatgaaggtgatgataaagtgaagatgattaaacttcagtcactgagaaggaaatttgagctgatgcagatggaagatgattagaag |
31355512 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
31355513 |
atttctgaatacatctctaaactcatcaatcttgtgaattagatgaaggcttgttatgaagctatcaatgatcaacagatagttgagaagattatgagga |
31355612 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||||||||||||| ||||| |||||||| |||||||| || |||||||| |
|
|
| T |
31355613 |
ccctatcttcaaggtttgatttcattgtagtagcaattcaggaatcaaaggatgtgaagacattgaagattgaagaattgcagagt |
31355698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 4 - 485
Target Start/End: Complemental strand, 43683302 - 43682822
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| ||| |||| |||||||||| ||||||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
43683302 |
tttggagcacaagatttgttggaaattgtgcagaatgatgtagttgaattagctccgaatgccactgaggtgcaaaggaacacacacaaggaattgaaga |
43683203 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| |
|
|
| T |
43683202 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcatttagttcaaaggaagcatgtgacat |
43683103 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
43683102 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatcactgagaaggaaatttgaactgatacaaatggaagatgatcagaag |
43683003 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43683002 |
atttctgaatacatctctaacctcatcaatcttgtgaatcagatgaaggcttgtaatg-agctatcactgatcaacagatagttgaaaagattatgagga |
43682904 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgca |
485 |
Q |
| |
|
|||||| ||||||||||||||||||||| || ||||||||| ||||||| ||||| |||||||| ||||||||||| ||||| |
|
|
| T |
43682903 |
ccctatgttcaaggtttgatttcattgtagtagcaattcagtaatcaaaggatgtgaagacattgaagattgaggaactgca |
43682822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 85 - 350
Target Start/End: Original strand, 53977466 - 53977736
Alignment:
| Q |
85 |
gcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagtt |
184 |
Q |
| |
|
|||||||| || || |||||||| |||||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||| | ||| |
|
|
| T |
53977466 |
gcacacaaagatttaaagaagaaggattgcaaggctttatttctgattcaacaaagtcttgatgaaggtaactttgaaagaatctcaaaacccacaagta |
53977565 |
T |
|
| Q |
185 |
caaaggaagcatgggacattctttcaaagtatcatgaaggtgatg---ataaagtgaagttgattaaacttc--aatctctgagaaggaaatttgagctg |
279 |
Q |
| |
|
|||||||||| ||| |||||||| ||||| ||||| ||||||||| ||| || ||||||||||| |||| ||||| |||| ||||| ||||| ||| |
|
|
| T |
53977566 |
caaaggaagcttggaacattcttgcaaagcatcatcaaggtgatgatcatagggttaagttgattaagcttcaaaatctttgaggaggaagtttgaactg |
53977665 |
T |
|
| Q |
280 |
atgcaaatggaagatgatcagaagatttctgagtacatctctaaactcatcaatcttgtgaatcagatgaa |
350 |
Q |
| |
|
||||| ||||| ||||| ||||||||| ||||||| ||||| ||| |||||||| |||||||||| ||||| |
|
|
| T |
53977666 |
atgcagatggaggatgagcagaagattgctgagtatatctccaaattcatcaatattgtgaatcaaatgaa |
53977736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 61 - 476
Target Start/End: Original strand, 20290093 - 20290508
Alignment:
| Q |
61 |
aatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttg |
160 |
Q |
| |
|
||||| ||||| ||||| ||||| ||||| || || || |||||||| |||||||||| ||||| | |||||| | ||||||||||||||||||||| |
|
|
| T |
20290093 |
aatgcaactgaagtgcataggaatgcacataaagagttaaagaagaaggattgcaaggaattgttcctcattcaatagagtcttgatgaaggaaacttta |
20290192 |
T |
|
| Q |
161 |
aaagaatctcaaaatcactgagttcaaaggaagcatgggacattctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctct |
260 |
Q |
| |
|
||||||| || ||||| || ||||||||||| | | ||||| ||| |||||||||||||||||||| ||| || ||| || ||||| || | |
|
|
| T |
20290193 |
aaagaatttctaaatccacaagatcaaaggaagcttcaaatattctggaaaaatatcatgaaggtgatgataaggtggagcagataaagcttcagtcatt |
20290292 |
T |
|
| Q |
261 |
gagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagt |
360 |
Q |
| |
|
||||||||| ||| | ||||||||||||| ||||| |||||||| |||| |||||||| ||||| |||||| |||| |||||||| || |||| | | |
|
|
| T |
20290293 |
gagaaggaagtttaaattgatgcaaatggaggatgagaagaagattgctgattacatctccaaactaatcaatgttgtaaatcagataaaagcttatgga |
20290392 |
T |
|
| Q |
361 |
gaagctatcactgatcaacagatagttgaaaagattatgaggaccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgtta |
460 |
Q |
| |
|
|||| | || |||||||| || ||||| || || ||||| || |||||| |||| |||||||| || ||||| |||||||| |||||||| ||||| | |
|
|
| T |
20290393 |
gaagtagttacagatcaacaaattgttgagaaaatcatgagaacactatctccaagatttgattttatagtggttgcaattcatgaatcaaaggatgtga |
20290492 |
T |
|
| Q |
461 |
agacattaaagattga |
476 |
Q |
| |
|
| || || |||||||| |
|
|
| T |
20290493 |
aaactttgaagattga |
20290508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 458; Significance: 0; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Complemental strand, 54171467 - 54170982
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
54171467 |
tttggagcacaagacctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacataaggaattgaaga |
54171368 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54171367 |
aaaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
54171268 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
54171267 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcaaaag |
54171168 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54171167 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
54171068 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
54171067 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagttgcagagt |
54170982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Original strand, 21847662 - 21848147
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| || | |||||||||||| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
21847662 |
tttggagcacaagatttgcttgaaattgtgcagaatggtgtagatgaattagctgcgaatgccactgaagtgcaaaggaacgcacacaaggaattgaaga |
21847761 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21847762 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
21847861 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21847862 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
21847961 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21847962 |
atttctaagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
21848061 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
21848062 |
tcctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctacagagt |
21848147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 1 - 489
Target Start/End: Original strand, 9698112 - 9698600
Alignment:
| Q |
1 |
ctatttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
9698112 |
ctatttggagcacaagatctgttggaaattatgcagaatggtgtagatgaattagctatgaatgccactgaggtgcaaaggaacgcacacaaggaattga |
9698211 |
T |
|
| Q |
101 |
agaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatggga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | || ||||||||||||||||| |
|
|
| T |
9698212 |
agaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaaacagttagatcaaaggaagcatggga |
9698311 |
T |
|
| Q |
201 |
cattctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcag |
300 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
9698312 |
cattctttcaaagtatcatgaaggtggtgataaagtgaagttgattaagcttcaatcactgagaaggaaatttgagctggtgcaaatggaagatgatcag |
9698411 |
T |
|
| Q |
301 |
aagatttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatga |
400 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9698412 |
aagatttctgaatacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacatatagttgaaaagattatga |
9698511 |
T |
|
| Q |
401 |
ggaccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||| |||||||| |||||||| ||||| |||||||| ||||||||||| |||||||| |
|
|
| T |
9698512 |
ggactctatcttcaaggtttaatttcattgtggtagcaattcaagaatcaaaggatgtgaagacattgaagattgaggaattgcagagt |
9698600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 4 - 479
Target Start/End: Original strand, 43548251 - 43548724
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
|||||||||||| || |||| |||||||||||| |||||||| ||||||||||| ||||||| | ||||||||||||||| ||||||||||||||||| |
|
|
| T |
43548251 |
tttggagcacaatatatgtttgaaattgtgcagaatggtgtagatgaattagctccgaatgccatagaggtgcaaaggaac--acacaaggaattgaaga |
43548348 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||| |
|
|
| T |
43548349 |
agaaagattgcaaggctgtgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaaacagttagttcaaaggaagcatgggacat |
43548448 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
43548449 |
tctttcaaagtatcatgaaggtgatgataaagtgaaattgattaagcttcaatcactaagaaggaaatttgagctgatgcagatggaagatgatcaaaag |
43548548 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
43548549 |
atttctgaatacatatctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaatagatagttgaaaagattatgagga |
43548648 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgagga |
479 |
Q |
| |
|
| ||||||||||||||| ||||||||||||| |||| |||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
43548649 |
ctctatcttcaaggttttatttcattgtggtagcaactcaggaatcaaaggatgtgaagacattgaagattgagga |
43548724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Original strand, 756358 - 756844
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||| ||| |||||||| |||||||| ||||||| |||||||||||||||||| ||||| ||||||||||||| ||||| |||||||||| |
|
|
| T |
756358 |
tttggagcacatgatttgttggaagttgtgcagaatggtgtcggtgaattagctgcgaatgccactgatgtgcaaaggaacgaacaca--gaattgaaga |
756455 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
756456 |
agaaagattgcaaggctttgttcttgattcaatagagtcttgatgaaggaaactttgaaagaatctcaaaatcagtttgttcaaaggaagcatgggacat |
756555 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||| || ||||||||||||||||| ||||||| |||||| ||| |
|
|
| T |
756556 |
tctttcaaagtatcatgaaggtgatgataaagtgaaattgattaagcttcaatcactgaggagtaaatttgagctgatgcagatggaagttgatcacaag |
756655 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttg---tagtgaagctatcactgatcaacagatagttgaaaagattatga |
400 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||||||||||||| |||| || |||| |||| ||||||||||| |||||||| |||||||||| |
|
|
| T |
756656 |
atttctgaatacatctccaaactcatcaatcttgtgaatcagatgaagacttgtaataatgaaactattactgatcaacaaatagttgagaagattatga |
756755 |
T |
|
| Q |
401 |
ggaccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
756756 |
ggaccctatattcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggaactgcagagt |
756844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 476
Target Start/End: Complemental strand, 22931172 - 22930958
Alignment:
| Q |
262 |
agaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtg |
361 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | |||||| ||| |||||||| | || || ||| |||| ||||||||||||| |||||||| |
|
|
| T |
22931172 |
agaaggaaatttgagttgatgcaaatggaagatgagaaaaagattgttgattacatctccatgctgattaatgttgtaaatcagatgaaggtttgtagtg |
22931073 |
T |
|
| Q |
362 |
aagctatcactgatcaacagatagttgaaaagattatgaggaccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaa |
461 |
Q |
| |
|
| | || ||||| | | |||||||| |||||||||| || |||||||||||| || ||| || || ||||| || || ||||||| |||||| || |
|
|
| T |
22931072 |
gaacaatttctgataagaaaatagttgagaagattatgataactttatcttcaaggtctgcttttatagttgtggccatacaagaatcaacagatgtgaa |
22930973 |
T |
|
| Q |
462 |
gacattaaagattga |
476 |
Q |
| |
|
|| || |||||||| |
|
|
| T |
22930972 |
taccttgaagattga |
22930958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 446; Significance: 0; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Complemental strand, 8319627 - 8319142
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| || | |||||||||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
8319627 |
tttggagcacaagatttgcttgaaattgtgcagaatggtgtaggtgaattagctgcgaatgccactgaagtgcaaaggaacgcacacaaggaattgaaga |
8319528 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8319527 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
8319428 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8319427 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
8319328 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8319327 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
8319228 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
8319227 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
8319142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Complemental strand, 17881602 - 17881117
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||| | || | |||||||||||| |||||||| |||||||| || |||||| ||||| ||||||||||||||||| |||||||||| || |
|
|
| T |
17881602 |
tttggagcacaagttttgcttgaaattgtgcagaatggtgtaggtgaattagttgtgaatgccactgatgtgcaaaggaacgcacataaggaattgatga |
17881503 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
17881502 |
agaaagattgcaaggctttgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcattgagttcaaaggaagcatgggacat |
17881403 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
17881402 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatcactgagaaggaaatttgagctattgcaaatggaagatgatcataag |
17881303 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17881302 |
atttatgaatacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
17881203 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
17881202 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
17881117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 58 - 489
Target Start/End: Complemental strand, 27571801 - 27571370
Alignment:
| Q |
58 |
gcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaact |
157 |
Q |
| |
|
||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
27571801 |
gcgaatgtcactgaagtgaaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctattcttgattcaacaaagtcttgatgaaggaaact |
27571702 |
T |
|
| Q |
158 |
ttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacattctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatc |
257 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
27571701 |
ttgaaagaatctcaaaatcattgagttcaaaggaagcatgagacattctttcaaagtatcatgaaggtgatgataaagtgaaattgattaagcttcaatc |
27571602 |
T |
|
| Q |
258 |
tctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgt |
357 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27571601 |
actgagaaggaagtttgaactgatgcaaatggaagatgaatagaagatttctgaatacatctctaaactcatcaatcttgtgaatcagatgaaggcttgt |
27571502 |
T |
|
| Q |
358 |
agtgaagctatcactgatcaacagatagttgaaaagattatgaggaccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatg |
457 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27571501 |
agtgaagcaatcactgatcaacagatagttgaaaagattatgaggaccctatcttcaagatttgatttcattgtggtggcaattcaggaatcaaaagatg |
27571402 |
T |
|
| Q |
458 |
ttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||| |||||||||||| |||||||| |
|
|
| T |
27571401 |
ttaagacattgaagattgaggagttgcagagt |
27571370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 29 - 485
Target Start/End: Original strand, 17160152 - 17160608
Alignment:
| Q |
29 |
ttgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttctt |
128 |
Q |
| |
|
|||||||| |||||||| ||| |||||||||||||| || | ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| |
|
|
| T |
17160152 |
ttgtgcagaatggtgtaggtgatttagctgcgaatgccacaaaagtgcaaaggaacgcacacaaggatctgaagaagaaatattgcaaggctttgttctt |
17160251 |
T |
|
| Q |
129 |
gattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacattctttcaaagtatcatgaaggtgat |
228 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||||||| ||| || | ||||| |||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
17160252 |
gattcaacaaagtcttgatgaagctaacgttgaaagaatctacaaaacagttagttctaaggaagcatgggatattctttcaaagtaccatgaaggtgat |
17160351 |
T |
|
| Q |
229 |
gataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctgagtacatctctaaactca |
328 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||||| | || | ||||| |||||||||||||||| |
|
|
| T |
17160352 |
gataaagtgaagttgattaagcttcaatcactgaggaggaaatttgagctgatgcagatggaagatgataaaaaaaaatctgaatacatctctaaactca |
17160451 |
T |
|
| Q |
329 |
tcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgaggaccctatcttcaaggtttgatttcat |
428 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17160452 |
tcaatcttgtgaatcagatgaaggcttgtcgtgaagctattactgatcaacaaatagttgagaagattatgaggaccctatcttcaaggtttgatttcat |
17160551 |
T |
|
| Q |
429 |
tgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgca |
485 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || || ||||||||||||||||| |
|
|
| T |
17160552 |
tgtggtggcaattcaggaatcaaaagatgttaatacgttgaagattgaggagctgca |
17160608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 4 - 282
Target Start/End: Complemental strand, 21416729 - 21416451
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||||||| |||||| | |||||||||| |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
21416729 |
tttggagcacaagatctgttgaaaattgtgcagaatggtgtagatgaatcatctgcgaatgccactgaggtgcaaaggaacgcacacaaggaatttaaga |
21416630 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||| ||||| |
|
|
| T |
21416629 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaaatagttagttcaaaggaagcatgagacat |
21416530 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatg |
282 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||||||||||||||||| ||||| |
|
|
| T |
21416529 |
tctttcaaagtatcatgaatgtgatgataaagtgaaattgattaagcttcaatcactgagaaggaaatttgagatgatg |
21416451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 4 - 167
Target Start/End: Complemental strand, 14531428 - 14531265
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14531428 |
tttggagcacaagatctgttggaaattgtgcagaatggtgttaatgaattagctgcgaatgccactgaggtgcaaaggaacgcacacaaggaattgaaga |
14531329 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaat |
167 |
Q |
| |
|
|||| ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
14531328 |
agaatgattgcaagactatgttcttgattcaacaaagtcttgatgaaggaaattttgaaagaat |
14531265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 47 - 476
Target Start/End: Original strand, 23254130 - 23254558
Alignment:
| Q |
47 |
atgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaagaagaaagattgcaaggctctgttcttgattcaacaaagtcttga |
146 |
Q |
| |
|
|||| |||||||| ||||| | ||| | |||||||| || ||||| ||||| || ||||| |||| ||||||| ||| | |||||||| | ||| |||| |
|
|
| T |
23254130 |
atgatttagctgcaaatgcaaatgatattcaaaggaatgcgcacaaagaattaaaaaagaaggatttcaaggctttgtacctgattcaatatagtattga |
23254229 |
T |
|
| Q |
147 |
tgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacattctttcaaagtatcatgaaggtgatgataaagtgaagttgatt |
246 |
Q |
| |
|
||||||||||||||||||||| | |||||| |||||||||||||| | ||| |||||| |||||||| ||| |||||||||||| |||||||||||| |
|
|
| T |
23254230 |
tgaaggaaactttgaaagaattttaaaatccacaagttcaaaggaagcttaggatattcttgcaaagtatgatggaggtgatgataaggtgaagttgatt |
23254329 |
T |
|
| Q |
247 |
aaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctgagtacatctctaaactcatcaatcttgtgaatcaga |
346 |
Q |
| |
|
|| ||| | || |||| ||||| ||||| | ||||| ||||| ||||| |||||||| |||||||||||||||||| |||||| |||||||||| | |
|
|
| T |
23254330 |
aagctttagtcattgaggaggaagtttga-attatgcagatggaggatgagtagaagattgttgagtacatctctaaacttatcaatattgtgaatcaaa |
23254428 |
T |
|
| Q |
347 |
tgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgaggaccctatcttcaaggtttgatttcattgtggtggcaattcagga |
446 |
Q |
| |
|
||||||||||| | ||| | ||||| ||||| || ||||| || || | ||| || ||||| ||||| ||| |||| | ||||| |||||||||| |
|
|
| T |
23254429 |
tgaaggcttgtcagggagcagttactgaccaacaaattgttgagaaaatcacgagaacactatcatcaagattttattttttagtggtaacaattcagga |
23254528 |
T |
|
| Q |
447 |
atcaaaagatgttaagacattaaagattga |
476 |
Q |
| |
|
|||||| ||||| || ||||| ||||||| |
|
|
| T |
23254529 |
atcaaatgatgtgaaaacattgtagattga |
23254558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 377 - 479
Target Start/End: Complemental strand, 21414349 - 21414247
Alignment:
| Q |
377 |
aacagatagttgaaaagattatgaggaccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattga |
476 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||| |
|
|
| T |
21414349 |
aacaaatagttgaaaagattatgaggactctatcttcaaggtttgatttcattgtggtagcaattcaggaatcaaaggatgtgaagacattgaagattga |
21414250 |
T |
|
| Q |
477 |
gga |
479 |
Q |
| |
|
||| |
|
|
| T |
21414249 |
gga |
21414247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 27574325 - 27574266
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaat |
63 |
Q |
| |
|
||||||||||||||| || | ||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
27574325 |
tttggagcacaagatttgcttgaaattgtgcataatggtgtaggtgaattagctgcgaat |
27574266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 446; Significance: 0; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Original strand, 39794429 - 39794914
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| || | |||||||||||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
39794429 |
tttggagcacaagatttgcttgaaattgtgcagaatggtgtaggtgaattagctgcgaatgccactgaagtgcaaaggaacgcacacaaggaattgaaga |
39794528 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39794529 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
39794628 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39794629 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
39794728 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39794729 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
39794828 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
39794829 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
39794914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 4 - 489
Target Start/End: Original strand, 26312047 - 26312532
Alignment:
| Q |
4 |
tttggagcacaagatctgttggaaattgtgcaggatggtgtacatgaattagctgcgaatgctactgaggtgcaaaggaacgcacacaaggaattgaaga |
103 |
Q |
| |
|
||||||||||||||| || | |||||||||||| |||||||| |||||||||||||||||| ||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
26312047 |
tttggagcacaagatttgcttgaaattgtgcagaatggtgtaggtgaattagctgcgaatgccactgaagtgcaaaggaacacacacaaggaattgaaga |
26312146 |
T |
|
| Q |
104 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26312147 |
agaaagattgcaaggctctgttcttgattcaacaaagtcttgatgaaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacat |
26312246 |
T |
|
| Q |
204 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
303 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26312247 |
tctttcaaagtatcatgaaggtgatgataaagtgaagttgattaagctccaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaag |
26312346 |
T |
|
| Q |
304 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgagga |
403 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
26312347 |
atttctgagtacatctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagtttaaaagattatgagga |
26312446 |
T |
|
| Q |
404 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattaaagattgaggagctgcagagt |
489 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26312447 |
ccctatcttcaaggtttgatttcattgtggtggcaattcaggaatcaaaagatgttaagacattgaagattgaggagctgcagagt |
26312532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 149 - 407
Target Start/End: Complemental strand, 64755 - 64497
Alignment:
| Q |
149 |
aaggaaactttgaaagaatctcaaaatcactgagttcaaaggaagcatgggacattctttcaaagtatcatgaaggtgatgataaagtgaagttgattaa |
248 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
64755 |
aaggaaactttgaaagaatctcaaaatcaattagttcaaaggaagtatgggacattctttcaaagtatcatgaaggtgatgataaggtgaaattgattaa |
64656 |
T |
|
| Q |
249 |
acttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctgagtacatctctaaactcatcaatcttgtgaatcagatg |
348 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||| ||| |
|
|
| T |
64655 |
gcttcaatcactgaggaggaaatttgagctgatgcagatggaagatgatcagaagatttctgaatacatctccaaacccatcaatcttgtgaatcaaatg |
64556 |
T |
|
| Q |
349 |
aaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgaggaccct |
407 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
64555 |
aaggcttgtagtaaagctattactgatcaacagatagttgagaagattatgaggaccct |
64497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0027
Description:
Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 218 - 451
Target Start/End: Complemental strand, 54325 - 54093
Alignment:
| Q |
218 |
atgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctgagtacat |
317 |
Q |
| |
|
||||||||||||| || |||||| ||| || ||||||||| |||| ||||||||| | ||||| |||||||||| |||| |||||| ||| ||||| |
|
|
| T |
54325 |
atgaaggtgatgaaaaggtgaagcagatcaagcttcaatctttgaggaggaaatttcaactgatataaatggaagaatatcataagattgttgattacat |
54226 |
T |
|
| Q |
318 |
ctctaaactcatcaatcttgtgaatcagatgaaggcttgtagtgaagctatcactgatcaacagatagttgaaaagattatgaggaccctatcttcaagg |
417 |
Q |
| |
|
||| ||| | ||||| |||||||||||| |||||| || |||| | || ||||||||| || ||||||||||| ||||| |||||||| |||| |
|
|
| T |
54225 |
ctc-aaagtgatcaacattgtgaatcagaggaaggcatggagtgggacaatttatgatcaacaaattgttgaaaagataatgagaaccctatcaccaaga |
54127 |
T |
|
| Q |
418 |
tttgatttcattgtggtggcaattcaggaatcaa |
451 |
Q |
| |
|
||| | ||||| || || |||||||| ||||||| |
|
|
| T |
54126 |
tttaacttcatagttgtagcaattcaagaatcaa |
54093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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