View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11536_high_15 (Length: 260)
Name: NF11536_high_15
Description: NF11536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11536_high_15 |
 | |
|
| [»] scaffold0764 (1 HSPs) |
| | |
|
| [»] scaffold0313 (2 HSPs) |
| | |
|
| [»] scaffold0009 (1 HSPs) |
| | |
|
| [»] scaffold0535 (1 HSPs) |
| | |
|
| [»] scaffold0059 (1 HSPs) |
| | |
|
| [»] scaffold0262 (2 HSPs) |
| | |
|
| [»] scaffold0434 (1 HSPs) |
| | |
|
| [»] scaffold0811 (2 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 31824435 - 31824199
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
31824435 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgcatgttctt |
31824336 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
|||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31824335 |
catttagttcatgaatttatgggcttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
31824236 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||| |||| |
|
|
| T |
31824235 |
ctgactaagttcttaagtctttatgtcctttgattct |
31824199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 5615851 - 5616087
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5615851 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttcttggctttcatttaagtcacgtgaaccttgcatgttctt |
5615950 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
|||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5615951 |
catttagttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
5616050 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|||||| ||||||||||| ||||| ||||||| |||| |
|
|
| T |
5616051 |
ctgacttagttcttaagtttttatgtcctttgattct |
5616087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 20 - 255
Target Start/End: Original strand, 13286141 - 13286374
Alignment:
| Q |
20 |
ttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttcttc |
119 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| |
|
|
| T |
13286141 |
ttttgactttaatcaaataaatgcctttattccttgattgatcttagtcatgtacttttctgggcttttatttaagccacgtgaaccttgcatgttcttc |
13286240 |
T |
|
| Q |
120 |
atttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaactc |
219 |
Q |
| |
|
| || |||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
13286241 |
aatt-gttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaact-tttttaactttctgacctc |
13286338 |
T |
|
| Q |
220 |
tgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
13286339 |
tgactgagttcttaagtctttatgtcctttgattct |
13286374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 42595070 - 42594832
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| |||||||||||| || ||||| ||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
42595070 |
tttttgactttaatcaaataaatgcctttattccttgactgatcttagtcaatgcactttactgggcttttatttaagtcacgtgaaccttgcatgttct |
42594971 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
217 |
Q |
| |
|
|||||| |||||||||| | ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
42594970 |
tcatttggttcatgaatttctgggcttgattcttgatgttcatcatgaacaaccttctgaactctgtccaaccttttgaactctttttaactttctgaac |
42594871 |
T |
|
| Q |
218 |
tctgactgagttc-ttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||||||||||||| |||||||||||| ||||||| |||| |
|
|
| T |
42594870 |
tctgactgagttctttaagtctttatgtcctttgattct |
42594832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 20 - 255
Target Start/End: Complemental strand, 41027256 - 41027020
Alignment:
| Q |
20 |
ttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| |||||| |||||||||||||| ||| |||| |
|
|
| T |
41027256 |
ttttgactttaatcaaataaatgtctttattccttgattgatcttagtcaatgtactttactgggcttttatttaaatcacgtgaaccttgcatgctctt |
41027157 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
||||| |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41027156 |
catttggttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactttgtccaaccttctgaactctttttaactttctgaact |
41027057 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|| | ||||||||||||||||||| ||||||| |||| |
|
|
| T |
41027056 |
ctaattgagttcttaagtctttatgtcctttgattct |
41027020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 12827714 - 12827951
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||||||| ||| |||||||| || |||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
12827714 |
tttttgactttaatcaaataaatgcatttattgcttgattgatcttattcaatgtactttactaggcttttatttaagtcacgtgaaccttgcatgttct |
12827813 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
217 |
Q |
| |
|
|||||| |||||||||| | | ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
12827814 |
tcatttggttcatgaatttctatgattggttcttgatgttcatcataaacaaccttctgaactatgtccaaccttctgaactctttttaactttctgaac |
12827913 |
T |
|
| Q |
218 |
tctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||| |||| |
|
|
| T |
12827914 |
tctaactgagttcttaagtctttatgtcctttgattct |
12827951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 111 - 255
Target Start/End: Complemental strand, 25441774 - 25441630
Alignment:
| Q |
111 |
atgttcttcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactt |
210 |
Q |
| |
|
|||||||||||||| ||||||||| | ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
25441774 |
atgttcttcatttaattcatgaatttctgggcttggttcttaatgttcatcatgaacaaccttctgaactctgtccaaccttctgagctctttttaactt |
25441675 |
T |
|
| Q |
211 |
tctgaactctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| | ||||| |||| |
|
|
| T |
25441674 |
tctgaactctaactgagttcttaagtctttatgttctttgattct |
25441630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 15989025 - 15989121
Alignment:
| Q |
20 |
ttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggctttcatttaagtcacgtgaaccttgaatgtt |
115 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||| || |||||| ||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
15989025 |
ttttgactttaatcaaataaatgcctttattccttgattgatcttagtcaatatactttactgggcttttatttaagtcacgtaaaccttgaatgtt |
15989121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 40701640 - 40701558
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggctttcatttaagtcacg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||| | ||| ||||| |||||| |
|
|
| T |
40701640 |
tttttgactttaatcaaataaatgcttttattccttgattgatctaagtcaatgtactttactgagtttttatttatgtcacg |
40701558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 33090751 - 33090692
Alignment:
| Q |
164 |
gaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaactctgact |
224 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||| ||||||||| |||||||||||| |
|
|
| T |
33090751 |
gaacaaccttctgaactctatccaacctt-tgaactcaatttaactttatgaactctgact |
33090692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 522573 - 522809
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
522573 |
tttttgactttaatcaaataaatgcttttattccttgattgatctcagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgcatgttctt |
522672 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
|||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
522673 |
catttagttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
522772 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
522773 |
ctgactgagttcttaagtctttatgtcctttgattct |
522809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 17421677 - 17421913
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
17421677 |
tttttgactttaatcaaataaatggttttattccttgattgatcttagtcatgtacttttctaggctttcatttaagtcacgtgaaccttgcatgttctt |
17421776 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17421777 |
catttagttcatgaatttctggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
17421876 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||| |||| |
|
|
| T |
17421877 |
ctaactgagttcttaagtctttatgtcctttgattct |
17421913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 19 - 249
Target Start/End: Complemental strand, 30651277 - 30651046
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||| ||||| | |
|
|
| T |
30651277 |
tttttgactttaatcaaataaatgcgtttattccttgattgatcttagtcaatgtactttactgggcttttatttaagtcacgtgaaccttgtatgttat |
30651178 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
217 |
Q |
| |
|
|||||| |||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30651177 |
tcatttggttcatgaatttctgggtttggttcttgatgttcatcataaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
30651078 |
T |
|
| Q |
218 |
tctgactgagttcttaagtctttatatccttt |
249 |
Q |
| |
|
||| ||||||||||||||||||||| |||||| |
|
|
| T |
30651077 |
tctaactgagttcttaagtctttatgtccttt |
30651046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 16057941 - 16057704
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||| ||||||||| ||||||||||| ||||||||| |||| || |
|
|
| T |
16057941 |
tttttgactttaatcaaataaatgcctttattccttgattgatcctagtcaatgtactttactgggcttttatttaagtcacatgaaccttgtatgtcct |
16057842 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
217 |
Q |
| |
|
|||||| |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16057841 |
tcatttggttcatgaatttctgggtttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
16057742 |
T |
|
| Q |
218 |
tctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||| |||| |
|
|
| T |
16057741 |
tctaactgagttcttaagtctttatgtcctttgattct |
16057704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 27 - 255
Target Start/End: Complemental strand, 26458053 - 26457825
Alignment:
| Q |
27 |
tttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttcttcatttagt |
126 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||||||| || |
|
|
| T |
26458053 |
tttaatcaaataaatgcctttattccttaattgatcttagtcatgtacttttatgagcttttatttaagtcacgtgaaccttgcatgttcttcattt-gt |
26457955 |
T |
|
| Q |
127 |
tcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaactctgactga |
226 |
Q |
| |
|
|||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
26457954 |
tcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactctgtccaatcttctgaactctttttaactttctaaactcagactga |
26457855 |
T |
|
| Q |
227 |
gttc-ttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|||| |||||||||||| ||||||| |||| |
|
|
| T |
26457854 |
gttctttaagtctttatgtcctttgattct |
26457825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 230
Target Start/End: Complemental strand, 41525428 - 41525361
Alignment:
| Q |
164 |
gaacaaccttctgaactctgtcc-aaccttctgaactctttttaactttctgaactctgactgagttc |
230 |
Q |
| |
|
||||||||||||||||| | | | ||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
41525428 |
gaacaaccttctgaactatcttcgaaccttctgaactctggctaaccttctgaactctgactgagttc |
41525361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 1975060 - 1975296
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
1975060 |
tttttgactttaatcaaataaatgcttttattccttgattgatctcagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgcatgttctt |
1975159 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
|||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1975160 |
catttagttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
1975259 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
1975260 |
ctgactgagttcttaagtctttatgtcctttgattct |
1975296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 1982426 - 1982662
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
1982426 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgcatgttctt |
1982525 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
|||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1982526 |
catttagttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactttgtccaaccttctgaactctttttaactttctgaact |
1982625 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
1982626 |
ctgactgagttcttaagtctttatgtcctttgattct |
1982662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 1989844 - 1990080
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
1989844 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgcatgttctt |
1989943 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
|||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1989944 |
catttagttcatgaatttcagggcttggttcttgatgttcatcatgaacaaccttctgaactttgtccaaccttctgaactctttttaactttctgaact |
1990043 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
1990044 |
ctgactgagttcttaagtctttatgtcctttgattct |
1990080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 41208242 - 41207986
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
|||||||||||||| |||||||||| |||||| |||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||| ||||||| |
|
|
| T |
41208242 |
tttttgactttaattaaataaatgcctttatttcttgattgatcttagtcaatgtactttactgggcttttatttaagtcatatgaaccttgcatgttct |
41208143 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaact-------------------ctgtccaaccttctgaac |
198 |
Q |
| |
|
||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
41208142 |
tcatttagttcatgaatttctgggcttggttcttgatgttcatcatgaccaaccttctgaactttgtccaaccttctgaactctgtccaaccttctgaac |
41208043 |
T |
|
| Q |
199 |
tctttttaactttctgaactctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
41208042 |
tctttttaactttctgaactctgactgagttcttaagtctttatgtcctttgattct |
41207986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 13404021 - 13404121
Alignment:
| Q |
20 |
ttttgactttaatc-aaataaatgcttttattccttgattgatctta-gtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
|||||||||| ||| |||||||||| |||| |||||||||||||| | ||||| ||||||||| |||| ||||| |||| |||| ||||||||||||| |
|
|
| T |
13404021 |
ttttgacttttatccaaataaatgcctttaatccttgattgatctaaagtcatagtcttttctggacttttatttatgtcatgtgagccttgaatgttct |
13404120 |
T |
|
| Q |
118 |
t |
118 |
Q |
| |
|
| |
|
|
| T |
13404121 |
t |
13404121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 52955644 - 52955689
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatctta |
65 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
52955644 |
tttttgactttaatcaaataaatgcctttatt-cttgattgatctta |
52955689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0764 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: scaffold0764
Description:
Target: scaffold0764; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 1155 - 1391
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
1155 |
tttttgactttaatcaaataaatgtttttattccttgattgatctcagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgcatgttctt |
1254 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
|||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1255 |
catttagttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
1354 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||| |||| |
|
|
| T |
1355 |
ctaactgagttcttaagtctttatgtcctttgattct |
1391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313 (Bit Score: 201; Significance: 1e-110; HSPs: 2)
Name: scaffold0313
Description:
Target: scaffold0313; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 5454 - 5218
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5454 |
tttttgactttaatcaaataaatgtttttattccttgattgatctcagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgcatgttctt |
5355 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
|||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5354 |
catttagttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
5255 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||| |||| |
|
|
| T |
5254 |
ctaactgagttcttaagtctttatgtcctttgattct |
5218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 19611 - 19375
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
19611 |
tttttgactttaatcaaataaatgtttttattccttgattgatctcagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgcatgttctt |
19512 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
|||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19511 |
catttagttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
19412 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||| |||| |
|
|
| T |
19411 |
ctaactgagttcttaagtctttatgtcctttgattct |
19375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 201; Significance: 1e-110; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 34765042 - 34764806
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
34765042 |
tttttgactttaatcaaataaatgtttttattccttgattgatctcagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgcatgttctt |
34764943 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
|||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34764942 |
catttagttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
34764843 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||| |||| |
|
|
| T |
34764842 |
ctaactgagttcttaagtctttatgtcctttgattct |
34764806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 22223946 - 22224183
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
22223946 |
tttttgactttaatcaaataaatgcctttattccttaattgatcttagtcaatgtactttactgggcttttatttaagtcacgtgaaccttgcatgttct |
22224045 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
217 |
Q |
| |
|
|||||| |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
22224046 |
tcatttggttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactatgtccaaccttctgaactctttttaactttctgaac |
22224145 |
T |
|
| Q |
218 |
tctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||| |||||||||||| |||||||| ||||||| |||| |
|
|
| T |
22224146 |
tcttactgagttcttaggtctttatgtcctttgattct |
22224183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 22249781 - 22250018
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
22249781 |
tttttgactttaatcaaataaatgcctttattccttaattgatcttagtcaatgtactttactgggcttttatttaagtcacgtgaaccttgcatgttct |
22249880 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
217 |
Q |
| |
|
|||||| |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
22249881 |
tcatttggttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactatgtccaaccttctgaactctttttaactttctgaac |
22249980 |
T |
|
| Q |
218 |
tctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||| |||||||||||| |||||||| ||||||| |||| |
|
|
| T |
22249981 |
tcttactgagttcttaggtctttatgtcctttgattct |
22250018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 24370676 - 24370838
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
24370676 |
tttttgactttaatcaaataaatgtctttattccttgattgatcttagtcatgtacttttctgggcttttatttaagtcacgtgaaccttgcatgttctt |
24370775 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactct |
182 |
Q |
| |
|
||||| |||||||||| | ||| |||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
24370776 |
cattt-gttcatgaatttctgggcttggttcttaatgttcatcatgaacaaccttctgaactct |
24370838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 8563596 - 8563779
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
8563596 |
tttttgactttaatcaaataaatgcctttattccttgattgatcttagtcaatgtactttactgggcttttatttaagtcacgtgaaccttgcatgttct |
8563695 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactct |
201 |
Q |
| |
|
|||||| |||||||||| | ||| |||| ||||||||||||||||||||||||||||||||||| | ||| ||||||||||| |
|
|
| T |
8563696 |
tcatttggttcatgaatttctgggcttgactcttgatgttcatcatgaacaaccttctgaactctctttaactttctgaactct |
8563779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 24370823 - 24370885
Alignment:
| Q |
186 |
caaccttctgaactctttttaactttctgaactctgactgagttcttaagtctttatatcctt |
248 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
24370823 |
caaccttctgaactctttttaactttttgaactttgactgagttcttaagtctttatgtcctt |
24370885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 8563762 - 8563815
Alignment:
| Q |
203 |
tttaactttctgaactctgactgagttc-ttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||| ||||||| |||| |
|
|
| T |
8563762 |
tttaactttctgaactctgactgagttctttaagtctttatgtcctttgattct |
8563815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 27160287 - 27160523
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
27160287 |
tttttgactttaatcaaataaatgcttttattccttgattgatctcagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgcatgttctt |
27160386 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
|||||||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27160387 |
catttagttcatgagtttctgggcttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
27160486 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|||||||||||||||||||||||| || |||| |||| |
|
|
| T |
27160487 |
ctgactgagttcttaagtctttatgtcttttgattct |
27160523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 27170656 - 27170892
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
27170656 |
tttttgactttaatcaaataaatgcttttattccttgattgatctcagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgcatgttctt |
27170755 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
|||||||||||||| | | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27170756 |
catttagttcatgagtttctgggcttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
27170855 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|||||||||||||||||||||||| || |||| |||| |
|
|
| T |
27170856 |
ctgactgagttcttaagtctttatgtcttttgattct |
27170892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 19 - 250
Target Start/End: Complemental strand, 19342008 - 19341776
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||||||| ||||| || |||| |
|
|
| T |
19342008 |
tttttgactttaatcaaataaatgcctttattccttgattgatctcagtcaatgtactttactgggcttttatttaagtcacgtgacccttgcattttct |
19341909 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
217 |
Q |
| |
|
|||||| |||||||||| | ||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
19341908 |
tcatttggttcatgaatttctgggcttggttcttgatgttcatcatgaataacattctgaactctgtccaaccttctgaactctttttaactttttgaac |
19341809 |
T |
|
| Q |
218 |
tctgactgagttcttaagtctttatatcctttg |
250 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |
|
|
| T |
19341808 |
tctgactgagttcttaagtctttatgtcctttg |
19341776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 22901799 - 22901562
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||| ||| ||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
22901799 |
tttttgactttaatcaaataaattcatttattccttgattgatcttagtcaatgtactttactgagcttttatttaagtcacgtgaaccttgcatgttct |
22901700 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
217 |
Q |
| |
|
|||||| |||||||||| | ||| |||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||| ||| |
|
|
| T |
22901699 |
tcatttggttcatgaatttatgggtctggttcttgatgttcatcattaacaaccttctgaactttgtccaatcttctgaactctttttaactttctaaac |
22901600 |
T |
|
| Q |
218 |
tctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
22901599 |
tctgactgagttcttaagtctttatgtcctttgattct |
22901562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 17 - 255
Target Start/End: Original strand, 22909137 - 22909377
Alignment:
| Q |
17 |
catttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgtt |
115 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||| | |||||| ||||||||||||||||||||| ||||| |
|
|
| T |
22909137 |
catttttgtctttaatcaaataaatgcctttattccttgattgatcttagtcaatgtactttagttggcttttatttaagtcacgtgaaccttgcatgtt |
22909236 |
T |
|
| Q |
116 |
cttcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctga |
215 |
Q |
| |
|
|||||||| ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||| ||| |
|
|
| T |
22909237 |
cttcatttgattcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactttgtccaactttctaaactctttttaactttatga |
22909336 |
T |
|
| Q |
216 |
actctgactgagttc-ttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||||| |||| |
|
|
| T |
22909337 |
actctgactgagttctttaagtctttatgtcctttgattct |
22909377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 24 - 182
Target Start/End: Complemental strand, 23721629 - 23721470
Alignment:
| Q |
24 |
gactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttcttcatt |
122 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| | ||||||| ||| ||||||||||||||||| |||||||||||| |
|
|
| T |
23721629 |
gactttagtcaaataaatgcctttattccttgattgatcttagtcaatgtactttacggggcttttattaaagtcacgtgaaccttgcatgttcttcatt |
23721530 |
T |
|
| Q |
123 |
tagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactct |
182 |
Q |
| |
|
| |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23721529 |
tggttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactct |
23721470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 249
Target Start/End: Original strand, 16135532 - 16135709
Alignment:
| Q |
69 |
atgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttcttcatttagttcatgaatatttggacttggttcttgatgttcatcatgaaca |
168 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| |||||||||||||||||| || |||||||||| | ||| | ||||||||| ||| | || || |
|
|
| T |
16135532 |
atgtacttttctgggcttttatttatgtcacatgaaccttgaatgttcttgataatgttcatgaatttctgggtt--gttcttgatagccataa-gagca |
16135628 |
T |
|
| Q |
169 |
accttctgaactctgtccaaccttctgaactctttttaactttctgaactctgactgagttcttaagtctttatatccttt |
249 |
Q |
| |
|
| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| |||||| |
|
|
| T |
16135629 |
atcttctgaaatctgtccaaccttctgaactcagtttaactttctgaactctgactgggttcataagtctttatgtccttt |
16135709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 15475643 - 15475729
Alignment:
| Q |
20 |
ttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggctttcatttaagtcacgtgaac |
105 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||||||| |
|
|
| T |
15475643 |
ttttgactttaatcaaataaatgcctttattccttgattgatcttagtcaatgtacttttctggacttttatttatgtcacgtgaac |
15475729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 15479203 - 15479282
Alignment:
| Q |
101 |
tgaaccttgaatgttcttcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactc |
181 |
Q |
| |
|
||||||||| ||||||||||||| |||||||||| | || |||||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
15479203 |
tgaaccttgcatgttcttcatttggttcatgaatttctgaacttggtttttgatgttcatca-gaacaaccttctgaactc |
15479282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 23721485 - 23721418
Alignment:
| Q |
186 |
caaccttctgaactctttttaactttctgaactctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
23721485 |
caaccttctgaactcttt--aactttttgaactctgactgagttcttaagtctttatgtcctttgattct |
23721418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 250
Target Start/End: Original strand, 40409386 - 40409616
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| | || | ||||||| ||| ||||| ||||| | | |||| ||||| ||||||| |
|
|
| T |
40409386 |
tttttgactttaatcaaataaatggctttattccttgattgatctaattcaaagtactttactgagcttttatttatattatgtgagccttgcatgttct |
40409485 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
217 |
Q |
| |
|
| || | |||||||| | ||| ||| ||||||||| ||| | ||||||||||||||||| || ||| ||||||||| | | ||||||| ||||| |
|
|
| T |
40409486 |
tgataatggtcatgaatttctgggctt-gttcttgataaccat-aagaacaaccttctgaactatgctgaacattctgaactatgtctaactttatgaac |
40409583 |
T |
|
| Q |
218 |
tctgactgagttcttaagtctttatatcctttg |
250 |
Q |
| |
|
||||||| |||| ||||||| || ||||||| |
|
|
| T |
40409584 |
tctgactcggttcaaaagtcttaatgtcctttg |
40409616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 15479268 - 15479331
Alignment:
| Q |
186 |
caaccttctgaactctttttaactttctgaactctgactgagttcttaagtctttatatccttt |
249 |
Q |
| |
|
||||||||||||||| | |||||||| |||||||| ||||||||| ||||||||||| |||||| |
|
|
| T |
15479268 |
caaccttctgaactcatcttaactttttgaactctaactgagttcataagtctttatgtccttt |
15479331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 20957895 - 20957659
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
20957895 |
tttttgactttaatcaaataaatgcttttattccttgattgatctcagtcatgtacttttctaggccttcatttaagtcacgtgaaccttgcatgttctt |
20957796 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
|||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20957795 |
catttagttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
20957696 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||| |||| |
|
|
| T |
20957695 |
ctaactgagttcttaagtctttatgtcctttgattct |
20957659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 20947506 - 20947270
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
20947506 |
tttttgactttaatcaaataaatgcttttattccttgattgatctcagtcatgtacttttctaggccttcatttaagtcacgtgaaccttgcatgttctt |
20947407 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
218 |
Q |
| |
|
|||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20947406 |
catttagttcatgaatttctgggtttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaact |
20947307 |
T |
|
| Q |
219 |
ctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||| |||| |
|
|
| T |
20947306 |
ctaactgagttcttaagtctttatgtcctttgattct |
20947270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 19548824 - 19549061
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
19548824 |
tttttgacttaaatcaaataaatgtctttattccttgattgatcttagtcaatatacttttctgggcttttatttaagtcacgtgaaccttgcatgttct |
19548923 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
217 |
Q |
| |
|
|||||| |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19548924 |
tcatttggttcatgaatttctgggtttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
19549023 |
T |
|
| Q |
218 |
tctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||| |||| |
|
|
| T |
19549024 |
tctaactgagttcttaagtctttatgtcctttgattct |
19549061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 36316075 - 36315838
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||| |||||||||| |||||||||| ||||||| |
|
|
| T |
36316075 |
tttttgactttaatcaaataaatgtctttattccttgattgatcttagtcaatgtactttactgggattttatttaagtcatgtgaaccttgtatgttct |
36315976 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
217 |
Q |
| |
|
| |||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
36315975 |
ttatttggttcatgaatttttgggtttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttttgaac |
36315876 |
T |
|
| Q |
218 |
tctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||| ||||||||||||||||||||| ||||||| |||| |
|
|
| T |
36315875 |
tctaactgagttcttaagtctttatgtcctttgattct |
36315838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 14437088 - 14436851
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14437088 |
tttttgactttaatcaaataaatgcttttattctttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgtatgttctt |
14436989 |
T |
|
| Q |
119 |
cattt-agttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
217 |
Q |
| |
|
||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
14436988 |
cattttagttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactttttttaactttctgaac |
14436889 |
T |
|
| Q |
218 |
tctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||||||||||||||||||||||||| | ||||| |||| |
|
|
| T |
14436888 |
tctgactgagttcttaagtctttatgttctttgattct |
14436851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 26362715 - 26362897
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26362715 |
tttttgactttaataaaataaatgctcttattctttgatttatcttagtcttgtacttttctgggctttcatttaagtcacgtgaaccttgcatgttctt |
26362814 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactct |
201 |
Q |
| |
|
||||||| ||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26362815 |
tatttagtacatgagtatctgggcttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactct |
26362897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 250
Target Start/End: Original strand, 12841862 - 12842083
Alignment:
| Q |
28 |
ttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttcttcatttagt |
126 |
Q |
| |
|
|||||| |||||||| |||||| |||||||||||| ||||| |||||||| |||||| || ||||| ||||||||| || || ||||||||||| | || |
|
|
| T |
12841862 |
ttaatctaataaatgtctttatttcttgattgatctaagtcaatgtactttactgggcctttatttatgtcacgtgagccctgtatgttcttcatattgt |
12841961 |
T |
|
| Q |
127 |
tcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaactctgactga |
226 |
Q |
| |
|
|||| ||| | ||| |||| ||||| || | ||| | || ||||||||| |||||||||||||||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
12841962 |
tcataaatttctgggcttg-ttctttatatccataa-gagcaaccttctaaactctgtccaaccttctaaactcagtttaactttctgaaccctgactgg |
12842059 |
T |
|
| Q |
227 |
gttcttaagtctttatatcctttg |
250 |
Q |
| |
|
|||| |||| ||| || ||||||| |
|
|
| T |
12842060 |
gttcataagccttaatgtcctttg |
12842083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 26362887 - 26362932
Alignment:
| Q |
210 |
ttctgaactctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
26362887 |
ttctgaactctgactgagttcttaagtctttatgtcctttgattct |
26362932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 18536306 - 18536171
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
||||| |||||||||||||||||| ||||||| ||||||||||| | || || || ||| || | |||| ||||| | ||||||| ||||||||||| | |
|
|
| T |
18536306 |
tttttaactttaatcaaataaatgtgtttattctttgattgatctaattcaatatagtttactcgacttttatttatgccacgtgatccttgaatgttat |
18536207 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgat |
154 |
Q |
| |
|
| || ||||||||||| ||||| ||| ||||||||| |
|
|
| T |
18536206 |
tgataaagttcatgaatttttgggctt-gttcttgat |
18536171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 166; Significance: 6e-89; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 19 - 255
Target Start/End: Complemental strand, 24793164 - 24792927
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||| ||| |||||||||| |||||||||| ||||||| |
|
|
| T |
24793164 |
tttttgactttaatcaaataaatgcctttattccttgattgatcttagtcaatgtattttactgggtttttatttaagtcatgtgaaccttgcatgttct |
24793065 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
217 |
Q |
| |
|
|||||| |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
24793064 |
tcatttggttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactttgtccaaccttctgaactctttttaactttctgaac |
24792965 |
T |
|
| Q |
218 |
tctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||||| |||||||||||||||||| ||||||| |||| |
|
|
| T |
24792964 |
tctgagcgagttcttaagtctttatgtcctttgattct |
24792927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 21 - 255
Target Start/End: Original strand, 24873615 - 24873850
Alignment:
| Q |
21 |
tttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttcttc |
119 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||||| ||| || || |
|
|
| T |
24873615 |
tttgacttttatcaaataaatgcctttattccttgattgatcttagtcaatgtactttactgggcttttatttaagtcacatgaaccttgcatgatcgtc |
24873714 |
T |
|
| Q |
120 |
atttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaactc |
219 |
Q |
| |
|
|||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||| || ||||||||||||||||||||| |
|
|
| T |
24873715 |
ttttagttcatgagtatctgggcttggttcttgatgttcatcatgaacaaccttctgaactctgttcaactttctaaattctttttaactttctgaactc |
24873814 |
T |
|
| Q |
220 |
tgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
24873815 |
tgactgagttcttaagtctttatgtcctttgattct |
24873850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 49387729 - 49387911
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
49387729 |
tttttgactttaatcaaataaatgcctttattccttgattgatcttagtcatgtacttttttgggctttcatttaagtcacgtgaaccttgcatgttctt |
49387828 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactct |
201 |
Q |
| |
|
|||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| |
|
|
| T |
49387829 |
catttagttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactctttttaactttctgaactct |
49387911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 82 - 183
Target Start/End: Complemental strand, 17732514 - 17732413
Alignment:
| Q |
82 |
ggctttcatttaagtcacgtgaaccttgaatgttcttcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactc |
181 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
17732514 |
ggcttttatttaagtcacgtgaaccttgcatgttcttcatttagttcatgaatttctgggcttgcttcttgatgttcatcatgaacaaccttccgaactc |
17732415 |
T |
|
| Q |
182 |
tg |
183 |
Q |
| |
|
|| |
|
|
| T |
17732414 |
tg |
17732413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 82 - 183
Target Start/End: Complemental strand, 19033745 - 19033644
Alignment:
| Q |
82 |
ggctttcatttaagtcacgtgaaccttgaatgttcttcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactc |
181 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
19033745 |
ggcttttatttaagtcacgtgaaccttgcatgttcttcatttagttcatgaatttctgggcttgcttcttgatgttcatcatgaacaaccttccgaactc |
19033646 |
T |
|
| Q |
182 |
tg |
183 |
Q |
| |
|
|| |
|
|
| T |
19033645 |
tg |
19033644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 49387877 - 49387946
Alignment:
| Q |
186 |
caaccttctgaactctttttaactttctgaactctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||| |
|
|
| T |
49387877 |
caaccttctgaactctttttaactttctgaactctgactgagttcttaagtttttatgtcctttgattct |
49387946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 21542634 - 21542733
Alignment:
| Q |
21 |
tttgactttaatc-aaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||| |||||||| ||||| ||||||||||| |||||| ||||| |||| |||| ||||| |||||||| |
|
|
| T |
21542634 |
tttgactttaatccaaataaatgcctttattcctttattgatctaagtcaatgtacttttctaggcttttatttatgtcatgtgagccttgcatgttctt |
21542733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 17733823 - 17733773
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca |
69 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
17733823 |
tttttgactttaaccaaataaatgtctttattccttgattgatcttagtca |
17733773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 19035092 - 19035042
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca |
69 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
19035092 |
tttttgactttaaccaaataaatgtctttattccttgattgatcttagtca |
19035042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 17732420 - 17732384
Alignment:
| Q |
214 |
gaactctgactgagttcttaagtctttatatcctttg |
250 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
17732420 |
gaactctgactgagttcttaagtctttatgtcctttg |
17732384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 19033651 - 19033615
Alignment:
| Q |
214 |
gaactctgactgagttcttaagtctttatatcctttg |
250 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
19033651 |
gaactctgactgagttcttaagtctttatgtcctttg |
19033615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 19 - 242
Target Start/End: Original strand, 267272 - 267495
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcat-gtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||||||||| ||||| || |||||||||||| ||||||| |
|
|
| T |
267272 |
tttttgactttaatcaaataaatacctttattccttgattgatcttagtcaacgtacttcactgggcttttatttatgttacgtgaaccttgcatgttct |
267371 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
217 |
Q |
| |
|
|||||| |||||||| | | ||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
267372 |
tcatttggttcatgagtttatgggcttggttcttgatgttcatca-gaacaaccttctgaactttgtccaaccttctgaactcattttaactttctgaac |
267470 |
T |
|
| Q |
218 |
tctgactgagttcttaagtctttat |
242 |
Q |
| |
|
| ||||||||||||||||||||||| |
|
|
| T |
267471 |
tttgactgagttcttaagtctttat |
267495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0535 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0535
Description:
Target: scaffold0535; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 19 - 236
Target Start/End: Original strand, 1275 - 1494
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtca-tgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||||||| || |||| |
|
|
| T |
1275 |
tttttgactttaatcaaataaatgcctttattccttgatttatcttagtcaatgtactttactgggcttttatttaagtcacgtgaaccttgcatattct |
1374 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactct-gtccaaccttctgaactctttttaactttctgaa |
216 |
Q |
| |
|
||||||||||||||||| | ||| ||||||||||||||||||| ||||| ||||||||||||| | || ||||||||||||||| |||| ||||||| |
|
|
| T |
1375 |
tcatttagttcatgaatttctgggcttggttcttgatgttcataatgaaaaaccttctgaactatcttcgaaccttctgaactctaactaaccttctgaa |
1474 |
T |
|
| Q |
217 |
ctctgactgagttcttaagt |
236 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
1475 |
ctctgactgagttcataagt |
1494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 19 - 250
Target Start/End: Original strand, 40947 - 41178
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
40947 |
tttttgactttaatcaaataaatgcttttattccttgattgctcttagtcaatgtactttattgggcttttatttatgtcacgtgaaccttgcatgttct |
41046 |
T |
|
| Q |
118 |
tcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactctttttaactttctgaac |
217 |
Q |
| |
|
|||||| |||||||||| | | |||||| ||||| ||||||| || ||||||||||||||||||||||||||||||||| |||||| ||| ||||| |
|
|
| T |
41047 |
tcatttggttcatgaatttccgagtttggtttttgattttcatca-gagaaaccttctgaactctgtccaaccttctgaactc-ttttaattttttgaac |
41144 |
T |
|
| Q |
218 |
tctgactgagttc-ttaagtctttatatcctttg |
250 |
Q |
| |
|
| ||||||||||| ||||||||||| ||||||| |
|
|
| T |
41145 |
tatgactgagttctttaagtctttaagtcctttg |
41178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0262 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0262
Description:
Target: scaffold0262; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 1310 - 1128
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttctt |
118 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
1310 |
tttttgacttgaatcaaataaatgtctttattcactgattgatcttagttatgtacttttctgcgcttttatttaagtcacgtgaaccttgcatgttctt |
1211 |
T |
|
| Q |
119 |
catttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactct |
201 |
Q |
| |
|
||||| |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| | | ||| ||||||||||| |
|
|
| T |
1210 |
catttggttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactttttttaactttctgaactct |
1128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0262; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 1147 - 1093
Alignment:
| Q |
201 |
tttttaactttctgaactctgactgagttcttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| ||||||| |||| |
|
|
| T |
1147 |
tttttaactttctgaactctggctgagttcttaagtctttatgtcctttgattct |
1093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0434 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0434
Description:
Target: scaffold0434; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 101 - 255
Target Start/End: Complemental strand, 14173 - 14018
Alignment:
| Q |
101 |
tgaaccttgaatgttcttcatttagttcatgaatatttggacttggttcttgatgttcatcatgaacaaccttctgaactctgtccaaccttctgaactc |
200 |
Q |
| |
|
||||||||| ||||||||||||| |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |
|
|
| T |
14173 |
tgaaccttgcatgttcttcatttggttcatgaatttctgggcttggttcttgatgttcatcatgaacaaccttctgaactttgtccaaccttctgaaatc |
14074 |
T |
|
| Q |
201 |
tttttaactttctgaactctgactgagttc-ttaagtctttatatcctttgcttct |
255 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||||||||| | ||||| |||| |
|
|
| T |
14073 |
tttttaactttctgaactctaactgagttctttaagtctttattttctttgattct |
14018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0811 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0811
Description:
Target: scaffold0811; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 3886 - 3986
Alignment:
| Q |
19 |
tttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggctttcatttaagtcacgtgaaccttgaatgttct |
117 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
3886 |
tttttgactttaatcaaataaatgcctttattccttgattgatcttagtcaatgtactttactgagcttttatttaagtcacgtgaaccttgaatgttct |
3985 |
T |
|
| Q |
118 |
t |
118 |
Q |
| |
|
| |
|
|
| T |
3986 |
t |
3986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0811; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 4031 - 4103
Alignment:
| Q |
164 |
gaacaaccttctgaactctgtcc-aaccttctgaactctttttaactttctgaactctgactgagttcttaag |
235 |
Q |
| |
|
||||||| ||||||||| | | | |||||||||||||||| |||| ||| ||||||||||||||||| |||| |
|
|
| T |
4031 |
gaacaactttctgaactattttcgaaccttctgaactcttactaaccttcagaactctgactgagttcataag |
4103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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