View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11536_high_6 (Length: 425)

Name: NF11536_high_6
Description: NF11536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11536_high_6
NF11536_high_6
[»] chr8 (7 HSPs)
chr8 (16-425)||(14003870-14004279)
chr8 (16-425)||(5766525-5766934)
chr8 (48-152)||(17635608-17635712)
chr8 (96-226)||(18314638-18314768)
chr8 (48-152)||(17642887-17642991)
chr8 (186-223)||(17643025-17643062)
chr8 (48-136)||(34935939-34936027)
[»] chr4 (11 HSPs)
chr4 (280-401)||(1481511-1481632)
chr4 (47-223)||(8186310-8186486)
chr4 (47-155)||(661855-661963)
chr4 (48-111)||(1481684-1481747)
chr4 (282-397)||(8186539-8186654)
chr4 (55-155)||(55907634-55907734)
chr4 (96-139)||(553772-553815)
chr4 (286-348)||(532630-532692)
chr4 (275-329)||(7225324-7225378)
chr4 (187-227)||(12124517-12124557)
chr4 (285-325)||(21833493-21833533)
[»] chr6 (5 HSPs)
chr6 (50-134)||(7132323-7132407)
chr6 (50-134)||(7135246-7135330)
chr6 (50-134)||(7138169-7138253)
chr6 (50-155)||(8913374-8913479)
chr6 (94-202)||(6403528-6403636)
[»] chr2 (1 HSPs)
chr2 (55-155)||(1036570-1036670)
[»] chr1 (2 HSPs)
chr1 (70-226)||(7555124-7555280)
chr1 (280-325)||(19467627-19467672)
[»] chr5 (1 HSPs)
chr5 (48-223)||(29021726-29021901)
[»] chr7 (3 HSPs)
chr7 (50-152)||(10169004-10169106)
chr7 (50-152)||(10176529-10176631)
chr7 (55-152)||(10615713-10615810)


Alignment Details
Target: chr8 (Bit Score: 398; Significance: 0; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 16 - 425
Target Start/End: Complemental strand, 14004279 - 14003870
Alignment:
Q  16 cacttcttactcaaatctctagcttcccaatgttgaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctc 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14004279 cacttcttactcaaatctctagcttcccaatgttcaaactcacatcgctcaatctttccaaccaacccatccttcctgctaatggtttgcgagctttctc 14004180  T
Q  116 tcagaacattacaactttgacctcacttatttgttccaaccttaattctcttaatagcactgatctccatctcattgctgattgttttcctttgctagaa 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14004179 tcagaacattacaactttgacctcacttatttgttccaaccttaattctcttaatagcactgatctccatctcattgctgattgttttcctttgctagaa 14004080  T
Q  216 gaactcgacctcgcttacccctctaaaatcattaatcacacacatgctaccttctccactggactagaggctctttcattagcactcatcaaactccgca 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14004079 gaactcgacctcgcttacccctctaaaatcattaatcacacacatgctaccttctccactggactagaggctctttcattagcactcatcaaactccgca 14003980  T
Q  316 aggttaatctctcttatcatggctacctcaacggcactttgctttctcacttgttcaagaactgcaagtttctccaagaggtcatcttgcttagatgtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14003979 aggttaatctctcttatcatggctacctcaacggcactttgctttctcacttgttcaagaactgcaagtttctccaagatgtcatcttgcttagatgtga 14003880  T
Q  416 acaattaacc 425  Q
    ||||||||||    
T  14003879 acaattaacc 14003870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 16 - 425
Target Start/End: Original strand, 5766525 - 5766934
Alignment:
Q  16 cacttcttactcaaatctctagcttcccaatgttgaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5766525 cacttcttactcaaatctctagcttcccaatgttgaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctc 5766624  T
Q  116 tcagaacattacaactttgacctcacttatttgttccaaccttaattctcttaatagcactgatctccatctcattgctgattgttttcctttgctagaa 215  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||  ||||||||||||||||    
T  5766625 tcagaacattacaactttgacctcacttatttgttccaaccttatttctcttaatagcactgatatccacctcattgctgatacttttcctttgctagaa 5766724  T
Q  216 gaactcgacctcgcttacccctctaaaatcattaatcacacacatgctaccttctccactggactagaggctctttcattagcactcatcaaactccgca 315  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5766725 gaacttgacctcgcttacccctctaaaatcattaatcacacacatgctaccttctccactggactagaggctctttcattagcactcatcaaactccgca 5766824  T
Q  316 aggttaatctctcttatcatggctacctcaacggcactttgctttctcacttgttcaagaactgcaagtttctccaagaggtcatcttgcttagatgtga 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5766825 aggttaatctctcttatcatggctacctcaacggcactttgctttctcacttgttcaagaactgcaagtttctccaagaggtcatcttgcttagatgtga 5766924  T
Q  416 acaattaacc 425  Q
    ||||||||||    
T  5766925 acaattaacc 5766934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 17635608 - 17635712
Alignment:
Q  48 ttgaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttattt 147  Q
    |||||||||| ||| |||||||| ||||||||||||| | ||||  ||||||| || ||||||||||| | ||| ||||||||||||||||| || | ||    
T  17635608 ttgaaactcatatcactcaatctgtccaaccaactcaccattccaactaatgggttacgagctttctcccggaatattacaactttgacctctctcactt 17635707  T
Q  148 gttcc 152  Q
    |||||    
T  17635708 gttcc 17635712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 96 - 226
Target Start/End: Original strand, 18314638 - 18314768
Alignment:
Q  96 aatggtttgcgagctttctctcagaacattacaactttgacctcacttatttgttccaaccttaattctcttaatagcactgatctccatctcattgctg 195  Q
    ||||| || |||| ||||||||| || ||||||||||||||||||||    |||||  || || | |||||  || |||||||||||   ||||||||||    
T  18314638 aatggcttacgagttttctctcaaaatattacaactttgacctcactctcatgttcttacattcaatctctccatggcactgatctcttcctcattgctg 18314737  T
Q  196 attgttttcctttgctagaagaactcgacct 226  Q
    ||||||| |||||||| ||||||||||||||    
T  18314738 attgtttccctttgctcgaagaactcgacct 18314768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 17642887 - 17642991
Alignment:
Q  48 ttgaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttattt 147  Q
    |||||||||||||| |||||||| |||||||| |||| | ||||  | ||||| || | ||||||||| ||||| ||||||||||||||||| || | ||    
T  17642887 ttgaaactcacatcactcaatctctccaaccatctcaccattcccaccaatgggttacaagctttctcccagaatattacaactttgacctctctcactt 17642986  T
Q  148 gttcc 152  Q
    |||||    
T  17642987 gttcc 17642991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 17643025 - 17643062
Alignment:
Q  186 ctcattgctgattgttttcctttgctagaagaactcga 223  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  17643025 ctcatcgctgattgtttccctttgctagaagaactcga 17643062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 34935939 - 34936027
Alignment:
Q  48 ttgaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgac 136  Q
    ||||| || ||||| |||||||| |||||||| | |||| ||||    ||||||||||||| |||||| || || ||||||||||||||    
T  34935939 ttgaaccttacatcactcaatctctccaaccatcccatcattccacaaaatggtttgcgagttttctcacaaaatattacaactttgac 34936027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 280 - 401
Target Start/End: Complemental strand, 1481632 - 1481511
Alignment:
Q  280 tagaggctctttcattagcactcatcaaactccgcaaggttaatctctcttatcatggctacctcaacggcactttgctttctcacttgttcaagaactg 379  Q
    |||||||||||||||| |||||| |||||||||||||| ||||||||||| |||||  |||| |||||| || |||||||| ||| ||||||||||||||    
T  1481632 tagaggctctttcattggcactcttcaaactccgcaagcttaatctctctgatcattactacgtcaacgacattttgctttttcaattgttcaagaactg 1481533  T
Q  380 caagtttctccaagaggtcatc 401  Q
    |||||||||| || ||||||||    
T  1481532 caagtttctcgaaaaggtcatc 1481511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 47 - 223
Target Start/End: Original strand, 8186310 - 8186486
Alignment:
Q  47 gttgaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttatt 146  Q
    |||||| |||||||| |||||||| || ||| ||| || | ||||||| ||||| ||||||| | |||| |  || |||||||||||||||||||| |      
T  8186310 gttgaacctcacatcactcaatctctctaacaaacccaccattcctgcaaatggattgcgagttctctcccgaaatattacaactttgacctcactcaca 8186409  T
Q  147 tgttccaaccttaattctcttaatagcactgatctccatctcattgctgattgttttcctttgctagaagaactcga 223  Q
    ||||||||| || | ||| | |||||||||||  ||   ||||| || |||||||||||||| ||||||||||||||    
T  8186410 tgttccaacattgaatctatcaatagcactgacatcttcctcatcgccgattgttttcctttcctagaagaactcga 8186486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 155
Target Start/End: Complemental strand, 661963 - 661855
Alignment:
Q  47 gttgaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttatt 146  Q
    ||||||| |||| || |||||||| |||||||||  || | |||| ||||||||||||||||||||||| ||  | ||||||||||| ||||| || |||    
T  661963 gttgaaaatcacgtcactcaatctctccaaccaaaccaccattcccgctaatggtttgcgagctttctcccaatatattacaactttaacctctctcatt 661864  T
Q  147 tgttccaac 155  Q
    |||| ||||    
T  661863 tgttacaac 661855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 1481747 - 1481684
Alignment:
Q  48 ttgaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctt 111  Q
    ||||||||||||||||||||| | || |||||||||| |||||| |||||||| ||||||||||    
T  1481747 ttgaaactcacatcgctcaatatctcaaaccaactcaaccttcccgctaatggcttgcgagctt 1481684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 397
Target Start/End: Original strand, 8186539 - 8186654
Alignment:
Q  282 gaggctctttcattagcactcatcaaactccgcaaggttaatctctcttatcatggctacctcaacggcactttgctttctcacttgttcaagaactgca 381  Q
    |||||||||||||| |||||  ||||||| |||||||||||||| ||| |||||  |||  |||||| ||  ||||||| ||||||||| ||||| || |    
T  8186539 gaggctctttcattggcacttttcaaacttcgcaaggttaatctatctaatcataactatatcaacgacaaattgctttttcacttgttaaagaattgta 8186638  T
Q  382 agtttctccaagaggt 397  Q
    ||  |||| |||||||    
T  8186639 agcatctcgaagaggt 8186654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 55907634 - 55907734
Alignment:
Q  55 tcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttatttgttccaa 154  Q
    |||| ||||||||||| ||||||||||  ||| | || |||| ||| || ||||||||||| || || |||||||||||||  || || |||||||||||    
T  55907634 tcacttcgctcaatctctccaaccaacctatcatccccgctactggcttacgagctttctcccaaaatattacaactttgaattctctcatttgttccaa 55907733  T
Q  155 c 155  Q
    |    
T  55907734 c 55907734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 553815 - 553772
Alignment:
Q  96 aatggtttgcgagctttctctcagaacattacaactttgacctc 139  Q
    ||||| |||||||||||||| || ||||||||||||||||||||    
T  553815 aatgggttgcgagctttctcccaaaacattacaactttgacctc 553772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 532692 - 532630
Alignment:
Q  286 ctctttcattagcactcatcaaactccgcaaggttaatctctcttatcatggctacctcaacg 348  Q
    ||||||||||| ||||  |||||||||||||||||||||| |||  ||||| |||| ||||||    
T  532692 ctctttcattatcacttttcaaactccgcaaggttaatctttctactcatgactacatcaacg 532630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 7225324 - 7225378
Alignment:
Q  275 tggactagaggctctttcattagcactcatcaaactccgcaaggttaatctctct 329  Q
    |||| ||||||||||||||| ||||||  |||||||||| | |||||||||||||    
T  7225324 tggagtagaggctctttcatcagcacttttcaaactccgtagggttaatctctct 7225378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 12124557 - 12124517
Alignment:
Q  187 tcattgctgattgttttcctttgctagaagaactcgacctc 227  Q
    |||||||||||||||| ||||| ||||||||||| ||||||    
T  12124557 tcattgctgattgtttccctttactagaagaacttgacctc 12124517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 325
Target Start/End: Original strand, 21833493 - 21833533
Alignment:
Q  285 gctctttcattagcactcatcaaactccgcaaggttaatct 325  Q
    ||||||||| | ||||| |||||||||||||||||||||||    
T  21833493 gctctttcacttgcacttatcaaactccgcaaggttaatct 21833533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 7132407 - 7132323
Alignment:
Q  50 gaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttg 134  Q
    ||||||||||||||| | | | |||||||||| || | ||||||| ||||| |||||||||||||| || |||||||||||||||    
T  7132407 gaaactcacatcgcttagtatctccaaccaacacacctttcctgcaaatgggttgcgagctttctcccaaaacattacaactttg 7132323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 7135330 - 7135246
Alignment:
Q  50 gaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttg 134  Q
    ||||||||||||||| | | | |||||||||| || | ||||||| ||||| |||||||||||||| || |||||||||||||||    
T  7135330 gaaactcacatcgcttagtatctccaaccaacacacctttcctgcaaatgggttgcgagctttctcccaaaacattacaactttg 7135246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 7138253 - 7138169
Alignment:
Q  50 gaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttg 134  Q
    ||||||||||||||| | | | |||||||||| || | ||||||| ||||| |||||||||||||| || |||||||||||||||    
T  7138253 gaaactcacatcgcttagtatctccaaccaacacacctttcctgcaaatgggttgcgagctttctcccaaaacattacaactttg 7138169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 8913374 - 8913479
Alignment:
Q  50 gaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttatttgt 149  Q
    ||||||||||||||||||| | |||||||||   | | ||||||||||||| |||| || ||| ||| | || ||||||||||||||||| || | ||||    
T  8913374 gaaactcacatcgctcaatatctccaaccaatggacctttcctgctaatgggttgctagttttatctaaaaagattacaactttgacctctctcaattgt 8913473  T
Q  150 tccaac 155  Q
    ||||||    
T  8913474 tccaac 8913479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 6403636 - 6403528
Alignment:
Q  94 ctaatggtttgcgagctttctctcagaacattacaactttgacctcacttatttgttccaaccttaattctcttaatagcactgatctccatctcattgc 193  Q
    ||||||| |||||||||||||| |  ||  | || ||||||||||| |||  ||||||| || || |||||||||||||| || |||||   ||||||||    
T  6403636 ctaatgggttgcgagctttctcccgaaaggtcactactttgacctctcttgattgttccgacattgattctcttaatagctctcatctcttactcattgc 6403537  T
Q  194 tgattgttt 202  Q
     ||||||||    
T  6403536 cgattgttt 6403528  T

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Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 155
Target Start/End: Original strand, 1036570 - 1036670
Alignment:
Q  55 tcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttatttgttccaa 154  Q
    |||| ||||||||||| ||||||||||  ||| | || |||| ||| || ||||||||||| || || |||||||||||||| || || |||||||||||    
T  1036570 tcacttcgctcaatctctccaaccaacctatcatccccgctactggcttacgagctttctcccaaaatattacaactttgacttctctcatttgttccaa 1036669  T
Q  155 c 155  Q
    |    
T  1036670 c 1036670  T

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Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 226
Target Start/End: Complemental strand, 7555280 - 7555124
Alignment:
Q  70 tttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttatttgttccaaccttaattctcttaa 169  Q
    |||||||||||| || | | ||||| | ||| |||||||||||||| || || ||||||||||| |||||||| | |||||||||  |  ||||| | ||    
T  7555280 tttccaaccaacccaccatccctgcaattggattgcgagctttctcccaaaatattacaactttaacctcactcacttgttccaaaatggattctatcaa 7555181  T
Q  170 tagcactgatctccatctcattgctgattgttttcctttgctagaagaactcgacct 226  Q
    ||||| |||  |    ||||||||||| ||||| |||||||| ||||||||| ||||    
T  7555180 tagcaatgacttgttactcattgctgaatgtttccctttgctcgaagaactcaacct 7555124  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 19467627 - 19467672
Alignment:
Q  280 tagaggctctttcattagcactcatcaaactccgcaaggttaatct 325  Q
    |||||||||||||| | |||||  ||||||||||||||||||||||    
T  19467627 tagaggctctttcacttgcacttctcaaactccgcaaggttaatct 19467672  T

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Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 223
Target Start/End: Complemental strand, 29021901 - 29021726
Alignment:
Q  48 ttgaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttattt 147  Q
    ||||| |||||||| |||||| | ||| |||||   ||| |||| ||  |||||||||||||||||    | |||||||| ||||||||||| || | ||    
T  29021901 ttgaacctcacatctctcaatttctccgaccaagatatctttcccgcagatggtttgcgagctttcagcaaaaacattactactttgacctctctcactt 29021802  T
Q  148 gttccaaccttaattctcttaatagcactgatctccatctcattgctgattgttttcctttgctagaagaactcga 223  Q
    ||| | ||||| |  | || ||||||||| |||||  ||| ||||||||||| || |||||||| |||||||||||    
T  29021801 gttaccaccttgaaaccctcaatagcactcatctctttcttattgctgattgcttccctttgctcgaagaactcga 29021726  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000004; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 10169004 - 10169106
Alignment:
Q  50 gaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttatttgt 149  Q
    |||||||||||| ||| || ||||| |||||  || | |||| || ||||| ||||||| ||||||||| || |||| |||||||||||| || | ||||    
T  10169004 gaaactcacatcactcgatatttcctaccaatgcaccattcccgcaaatgggttgcgagttttctctcaaaatattagaactttgacctctctcacttgt 10169103  T
Q  150 tcc 152  Q
    |||    
T  10169104 tcc 10169106  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 10176529 - 10176631
Alignment:
Q  50 gaaactcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttatttgt 149  Q
    |||||||||||| ||| || ||||| |||||  || | |||| || ||||| ||||||| ||||||||| || |||| |||||||||||| || | ||||    
T  10176529 gaaactcacatcactcgatatttcctaccaatgcaccattcccgcaaatgggttgcgagttttctctcaaaatattagaactttgacctctctcacttgt 10176628  T
Q  150 tcc 152  Q
    |||    
T  10176629 tcc 10176631  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 10615810 - 10615713
Alignment:
Q  55 tcacatcgctcaatctttccaaccaactcatccttcctgctaatggtttgcgagctttctctcagaacattacaactttgacctcacttatttgttcc 152  Q
    ||||||| || ||| |||||||||||| ||   |||| || ||||| || ||||||||||| || || ||||||||||||||||| || | |||||||    
T  10615810 tcacatcacttaatatttccaaccaacccacagttcccgcaaatgggttacgagctttctcccaaaagattacaactttgacctctctcacttgttcc 10615713  T

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