View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11536_low_6 (Length: 463)

Name: NF11536_low_6
Description: NF11536
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11536_low_6
NF11536_low_6
[»] chr8 (11 HSPs)
chr8 (1-463)||(15805095-15805557)
chr8 (1-451)||(15799550-15800013)
chr8 (1-451)||(15764114-15764564)
chr8 (1-451)||(15812936-15813395)
chr8 (1-451)||(15697042-15697506)
chr8 (3-451)||(15722265-15722716)
chr8 (6-449)||(15703436-15703881)
chr8 (1-451)||(15711713-15712174)
chr8 (288-431)||(15692667-15692810)
chr8 (79-152)||(15692450-15692523)
chr8 (81-153)||(23560286-23560358)
[»] chr3 (12 HSPs)
chr3 (268-429)||(3080378-3080539)
chr3 (270-451)||(4547994-4548175)
chr3 (268-429)||(3094815-3094976)
chr3 (7-155)||(3080666-3080814)
chr3 (7-155)||(3095103-3095251)
chr3 (297-428)||(3102353-3102484)
chr3 (75-153)||(3123010-3123088)
chr3 (7-153)||(4547704-4547850)
chr3 (289-429)||(3122480-3122620)
chr3 (75-153)||(3103479-3103557)
chr3 (75-153)||(3132760-3132840)
chr3 (79-153)||(20341899-20341973)
[»] chr4 (14 HSPs)
chr4 (298-362)||(36370555-36370619)
chr4 (301-362)||(36399760-36399821)
chr4 (73-153)||(36366669-36366749)
chr4 (298-362)||(36435825-36435889)
chr4 (295-367)||(31717667-31717739)
chr4 (85-153)||(31733279-31733347)
chr4 (298-362)||(36376327-36376391)
chr4 (298-362)||(36407217-36407281)
chr4 (298-362)||(36412340-36412404)
chr4 (298-370)||(36419371-36419443)
chr4 (298-362)||(36429372-36429436)
chr4 (82-153)||(31702570-31702641)
chr4 (295-348)||(31724911-31724964)
chr4 (61-153)||(31740835-31740927)
[»] chr2 (4 HSPs)
chr2 (297-379)||(2662487-2662569)
chr2 (298-368)||(2672478-2672548)
chr2 (76-149)||(2672715-2672788)
chr2 (304-368)||(34192574-34192638)
[»] chr1 (1 HSPs)
chr1 (289-379)||(21917947-21918037)
[»] chr5 (2 HSPs)
chr5 (85-152)||(482817-482884)
chr5 (289-334)||(470065-470110)


Alignment Details
Target: chr8 (Bit Score: 431; Significance: 0; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 431; E-Value: 0
Query Start/End: Original strand, 1 - 463
Target Start/End: Original strand, 15805095 - 15805557
Alignment:
Q  1 tataatagaagactttgcctatgttctgaaagaaagaattcgccatttctttttccgtaaataatttctaatacaagaactccaaagctgaaaacatcag 100  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  15805095 tataatagaagactttgcatatgctctgaaagaaagaattcgccatttctttttccgtaaataatttctaatacaagaactccaaagctaaaaacatcgg 15805194  T
Q  101 atttcactgaaaataagccagccatagcatattctggagccatgtatccactgtataaaatgaaaatactgtcagttgtgaatcatgtgaaattttttaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||    
T  15805195 atttcactgaaaataagccagccatagcatattctggagccatgtatccactgtataaaattaaaatactgtcagttgtgaatcatgtgaaaatttataa 15805294  T
Q  201 tatttgctttgaaaaactttccaataatgcttactaggtgccaaaaactctttctgtttttgtcgggcattgatctttttcaaatctccttgctaatcca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15805295 tatttgctttgaaaaactttccaataatgcttactaggtgccaaaaactctttctgtttttgtcgggcattgatctttttcaaatctccttgctaatcca 15805394  T
Q  301 aaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggattactctaagtcgagaatcctcatgaaggtata 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15805395 aaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggattactctaagtcgagaatcctcatgaaggtata 15805494  T
Q  401 gcagtccttttgcaattccattgataatgcttcgtcgtaatctccaatctatgtgcctatgct 463  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15805495 gcagtccttttgcaattccattgataatgcttcgtcgtaatctccaatctatgtgcttatgct 15805557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 451
Target Start/End: Original strand, 15799550 - 15800013
Alignment:
Q  1 tataatagaagactttgcctatgttctgaaagaaagaattcgccatttctttttccgtaaataatttctaatacaagaactccaaagctgaaaacatcag 100  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||| || |||||||| |||||||||||||||||||||||||| |    
T  15799550 tatagtagaagactttgcatatgttctgaaagaaagaagtcgccatttctttttccgtatattatttctaacacaagaactccaaagctgaaaacatcgg 15799649  T
Q  101 atttcactgaaaataagccagccatagcatattctggagccatgtatccactgtata----aaatgaa---aatactgtcagttgtgaa---tcatgtga 190  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||    |||| ||   || ||  |||||||||||   ||||||||    
T  15799650 atttcactgaaaataacccagccatagcgtattcaggagccatgtatccactatatatataaaatcaacagaacaccatcagttgtgaaaaatcatgtga 15799749  T
Q  191 aattttttaatatttgctttgaaaa-actttccaataatg---cttactaggtgccaaaaactctttctgtttttgtcgggcattgatctttttcaaatc 286  Q
    |||||| || |||||| |||||||| | | |||||||||    | |||||||||||||||||||||| |||||||||| | ||||| ||||| ||||||     
T  15799750 aattttctactatttg-tttgaaaatagtgtccaataataacacatactaggtgccaaaaactctttttgtttttgtctgacattggtctttatcaaatg 15799848  T
Q  287 tccttgctaatccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggattactctaagtcgagaatc 386  Q
    | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15799849 ttcttgccaatccaaaatctgatatttttggattcatttcatcatccagaagaacattgctggctttcagatctctgtggattactctaagtcgagaatc 15799948  T
Q  387 ctcatgaaggtatagcagtccttttgcaattccattgataatgcttcgtcgtaatctccaatcta 451  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||| |||||||||    
T  15799949 ctcatgaaggtatagcaatcctcttgcaattccattgataatgcttagtcgtaatttccaatcta 15800013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 451
Target Start/End: Original strand, 15764114 - 15764564
Alignment:
Q  1 tataatagaagactttgcctatgttctgaaagaaagaattcgccatttctttttccgtaaataatttctaatacaagaactccaaagctgaaaacatcag 100  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| || |  |||||||||| |||||||||||| ||||||||||| |    
T  15764114 tataatagaagactttgcatatgttctgaaagaaagaattctccatttctttttccatacactatttctaatataagaactccaaaactgaaaacatcgg 15764213  T
Q  101 atttcactgaaaataagccagccatagcatattctggagccatgtatccactgtataaaatgaa---aatactgtcagttgtgaatcatgtgaaattttt 197  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||| || ||| | ||   || | | ||| |||||||||||||||||| ||     
T  15764214 atttcaccgaaaataacccagccatagcatattctggagccatgtatccactataaaaagtcaatagaacattttcaattgtgaatcatgtgaaatcttc 15764313  T
Q  198 taatatttgctttgaaaaactttccaataatgcttactaggtgccaaaaactctttctgtttttgtcgggcattgatctttttcaaatctccttgctaat 297  Q
    | |||| |   || ||||| || | | ||| ||||||||||| || | |||||| | ||||||| | || |||||||||||||||||| ||||||||||     
T  15764314 tgatatgt---tttaaaaagttgcaactaacgcttactaggttccgataactctatttgtttttcttggacattgatctttttcaaatgtccttgctaac 15764410  T
Q  298 ccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggattactctaagtcgagaatcctcatgaaggt 397  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15764411 ccaaaatctgatatttttggattcatttcatcatccagaagaacattgctagctttcagatccctgtggattactctaagtcgagaatcctcatgaaggt 15764510  T
Q  398 atagcagtccttttgcaattccattgataatgcttcgtcgtaatctccaatcta 451  Q
    ||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  15764511 atagcagtccttttgcaattccagtgacaatgcttagtcgtaatctccaatcta 15764564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 451
Target Start/End: Original strand, 15812936 - 15813395
Alignment:
Q  1 tataatagaagactttgcctatgttctgaaagaaagaattcgccatttctttttccgtaaataatttctaatacaagaactccaaagctgaaaacatcag 100  Q
    |||||||||||||||||| ||||||||||||||||||| || |||||||||||||| ||||| || ||||| |||||||||||||||||||||||||| |    
T  15812936 tataatagaagactttgcatatgttctgaaagaaagaagtctccatttctttttccataaattatctctaacacaagaactccaaagctgaaaacatcgg 15813035  T
Q  101 atttcactgaaaataagccagccatagcatattctggagccatgtatccactgtata----aaatgaa---aatactgtcagttgtgaatcatgtgaaat 193  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||    |||| ||   || | ||||||||||||||||||| || |    
T  15813036 atttcactgaaaataacccagccatagcgtattctggagccatgtatccactatatatataaaatcaagagaacaatgtcagttgtgaatcatgtaaatt 15813135  T
Q  194 tttttaa--tatttgctttgaaaaactttccaataatgcttactaggtgccaaaaactctttctgtttttgtcgggcattgatctttttcaaatctcctt 291  Q
    ||| |||  |||||| ||| ||| | ||| ||||||  | ||||||||||||| |||||||| ||| |||||  | ||||||||||||||||||  ||||    
T  15813136 tttctaacatatttgttttaaaagagttttcaataacccgtactaggtgccaataactctttttgtctttgtatgacattgatctttttcaaatgccctt 15813235  T
Q  292 gctaatccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggattactctaagtcgagaatcctcat 391  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  15813236 gctaatccaaaatcagatatttttggattcatttcatcatccagaagaacattgctcgctttcagatctctgtggattactctaagtggagaatcctcat 15813335  T
Q  392 gaaggtatagcagtccttttgcaattccattgataatgcttcgtcgtaatctccaatcta 451  Q
    |||||||||| |||||| |||| ||||| |||||||||||| |||||| | |||||||||    
T  15813336 gaaggtatagaagtcctcttgcgattcctttgataatgcttagtcgtagtttccaatcta 15813395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 451
Target Start/End: Original strand, 15697042 - 15697506
Alignment:
Q  1 tataatagaagactttgcctatgttctgaaagaaagaattcgccatttctttttccgtaaataatttctaatacaagaactccaaagctgaaaacatcag 100  Q
    |||||||||||||||||||||||||||||||| | |||||| ||||| |||||||| || | |||||||||||||||||||||||||||||||||||| |    
T  15697042 tataatagaagactttgcctatgttctgaaagtatgaattcaccattcctttttccatacacaatttctaatacaagaactccaaagctgaaaacatcgg 15697141  T
Q  101 atttcactgaaaataagccagccatagcatattctggagccatgtatccactgtataaaatgaaaa-tac--tgtcag--------ttgtgaatcatgtg 189  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| | |||| |||  ||||||        |||||||| |||||    
T  15697142 atttcactgaaaataatccagccatagcatattctggagccatgtatccgctgtttaaagtcaaaagtacattgtcagactcagagttgtgaattatgtg 15697241  T
Q  190 aaattttttaatatttgctttgaaaa---actttccaataatg-cttactaggtgccaaaaactctttctgtttttgtcgggcattgatctttttcaaat 285  Q
    || |||| ||||||||| ||||||||   | || |||||||   ||||||||||||||| |||||||| |||||||||| | | |||| |||||||||||    
T  15697242 aacttttctaatatttg-tttgaaaatagagttgccaataaacacttactaggtgccaataactctttttgtttttgtctgactttgacctttttcaaat 15697340  T
Q  286 ctccttgctaatccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggattactctaagtcgagaat 385  Q
     |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  15697341 ttccttgctaatccaaaatctgatattttcggattcatttcatcatccagaagaacattgctggctttcagatctctatggataactctaagtcgagaat 15697440  T
Q  386 cctcatgaaggtatagcagtccttttgcaattccattgataatgcttcgtcgtaatctccaatcta 451  Q
    | |  ||||||||||  |||||| |||| |||||||||||||| ||| |||||||| |||||||||    
T  15697441 cttggtgaaggtataaaagtcctcttgcgattccattgataatacttagtcgtaatgtccaatcta 15697506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 3 - 451
Target Start/End: Original strand, 15722265 - 15722716
Alignment:
Q  3 taatagaagactttgcctatgttctgaaagaaagaattcgccatttctttttccgtaaataatttctaatacaagaactccaaagctgaaaacatcagat 102  Q
    ||||||||||||||||||||| || || ||||||||||| |||||||||||||| ||||| |||||||||| |||||||||||||||  ||||||| |||    
T  15722265 taatagaagactttgcctatggtcggagagaaagaattcaccatttctttttccataaatgatttctaatataagaactccaaagctataaacatcggat 15722364  T
Q  103 ttcactgaaaataagccagccatagcatattctggagccatgtatccactgtataaaatgaaaatactgtcagttgtga-atcatgtgaaattttttaat 201  Q
    || |||||||| |  ||| |||||||||||||||||||||||||||| |||| |||||| || | | ||| |||||| | || ||| | |||||| ||||    
T  15722365 ttaactgaaaacactccaaccatagcatattctggagccatgtatccgctgtttaaaatcaatagaatgttagttgtaagattatggggaattttctaat 15722464  T
Q  202 atttgctt-tgaaaa-actttccaataatgcttactaggtgccaaaaactctttctgtttttgtcgggcattgatctttttcaaatctccttgctaatcc 299  Q
    ||||| ||  ||||| | || |||||||| |||||||||| |||| |||||||| ||||||||||     | |  |  |||||||| | ||||| || ||    
T  15722465 atttgattcagaaaagaattgccaataatacttactaggtaccaacaactctttttgtttttgtctcaattcgtccgctttcaaattttcttgccaaacc 15722564  T
Q  300 aaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggattactctaagtcgagaatcctcatgaaggtat 399  Q
    ||||||||||||||||||||||||||||   || |||||||| |||||||||||||||||||  ||||| |||||||||||||| |||||||| ||||||    
T  15722565 aaaatctgatatttttggattcatttcactgtccagaagaacgttgctggctttcagatctcgatggatgactctaagtcgagagtcctcatgcaggtat 15722664  T
Q  400 agcagtccttttgcaattccattgataatgcttcgtcgtaatctccaatcta 451  Q
     | |||||| |||| |||||||| | ||||||| || ||||| |||||||||    
T  15722665 tgtagtcctcttgcgattccatttacaatgcttagttgtaatttccaatcta 15722716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 6 - 449
Target Start/End: Original strand, 15703436 - 15703881
Alignment:
Q  6 tagaagactttgcctatgttctgaaagaaagaattcgccatttctttttccgtaaataatttctaatacaagaactccaaagctgaaaacatcagatttc 105  Q
    ||||||||||| |||||| ||  ||||||||||| | |  || ||||| || ||||  |||||||||| ||| ||||||||||| |||||||||||||||    
T  15703436 tagaagactttccctatgatccaaaagaaagaatccactgttccttttcccataaacgatttctaataaaagtactccaaagctaaaaacatcagatttc 15703535  T
Q  106 actgaaaataagccagccatagcatattctggagccatgtatccactgtataaaatgaaaata---ctgtcagttgtgaatcatgtgaaattttttaata 202  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||| | | |   |||| ||||| |||| |||| ||||||| |||||    
T  15703536 actgaaaataatccagccatagcatattctggagccatgtatccgctgtttaaaatgcacagatcactgttagttgcgaataatgtaaaattttctaata 15703635  T
Q  203 tttgctttgaaaa-actttccaataatgcttactaggtgccaaaaactctttctgtttttgtcgggcattgatctttttcaaatctccttgctaatccaa 301  Q
    |||| ||| |||| | ||  ||||||  ||| |||||| || | |||||||| ||||| |||| | | |||  |||| |||||| | ||||| |||||||    
T  15703636 tttgttttaaaaagagttgtcaataacacttgctaggttcccataactctttttgtttctgtctgactttggcctttctcaaattttcttgccaatccaa 15703735  T
Q  302 aatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggattactctaagtcgagaatcctcatgaaggtatag 401  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||| || ||||| ||||| |||||||||||||||||||  ||||||||||     
T  15703736 aatctgatatttttggattcatttcatcatctagaagaacgttgcaggctttaaggtctctatggataactctaagtcgagaatcctggtgaaggtataa 15703835  T
Q  402 cagtccttttgcaattccattgataatgcttcgtcgtaatctccaatc 449  Q
     ||||||  ||  |||||||||||||| ||   ||||||| |||||||    
T  15703836 aagtcctcgtg--attccattgataatactcaatcgtaatgtccaatc 15703881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 451
Target Start/End: Original strand, 15711713 - 15712174
Alignment:
Q  1 tataatagaagactttgcctatgttctgaaagaaagaattcgccatttctttttccgtaaataatttctaatacaagaactccaaagctgaaaacatcag 100  Q
    ||||| |||||  |||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||||| ||||||||||||||| || |||||||    
T  15711713 tataagagaagtgtttgcctatgttctgaaagaaagaattctccatttctttttccataaactatttctaatataagaactccaaagctaaatacatcag 15711812  T
Q  101 atttcactgaaaataagccagccatagcatattctggagccatgtatccactgtataaaatgaa---aatactgtcagttgtgaatcatgtgaaatttt- 196  Q
    | |||||||||||||| |||||||||||||||||||||||||||||||| || | |||||| ||   || |||||||||||||||| || |||| ||||     
T  15711813 acttcactgaaaataacccagccatagcatattctggagccatgtatccgctatttaaaatcaatagaacactgtcagttgtgaataatatgaagttttc 15711912  T
Q  197 --ttaatatttgctttga-----aaaactttccaataatgcttactaggtgccaaaaactctttctgtttttgtcgggcattgatctttttcaaatctcc 289  Q
      ||| | ||| | |  |     || | ||  | || |  |||||||||| || |  ||||||| ||||| |||| | | |||  |||||||||| || |    
T  15711913 tgttacttttttcatatataaagaagagttgtcgatgacacttactaggttcccatgactctttttgtttctgtctgactttggcctttttcaaaccttc 15712012  T
Q  290 ttgctaatccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggattactctaagtcgagaatcctc 389  Q
    |||| |||||||| |||||||||||||||||||||||||| || | ||| |||||||| ||||||| |||||| ||||| ||||||||||||||||||||    
T  15712013 ttgccaatccaaagtctgatatttttggattcatttcatcgtccaaaagtacattgcttgctttcatatctctatggataactctaagtcgagaatcctc 15712112  T
Q  390 atgaaggtatagcagtccttttgcaattccattgataatgcttcgtcgtaatctccaatcta 451  Q
     ||||| |||| ||||||| |||| || || ||||||||| ||  |||||  ||||||||||    
T  15712113 gtgaagatataacagtcctcttgctatcccgttgataatgtttaatcgtacactccaatcta 15712174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 288 - 431
Target Start/End: Original strand, 15692667 - 15692810
Alignment:
Q  288 ccttgctaatccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggattactctaagtcgagaatcc 387  Q
    |||||| |||||||||||||||||||| ||||||||||||| |||||  ||||||||||| ||||| |||||||| || |||||||| | || ||| |||    
T  15692667 ccttgccaatccaaaatctgatattttgggattcatttcatgatctaatagaacattgctagctttgagatctctatgaattactcttaatctagagtcc 15692766  T
Q  388 tcatgaaggtatagcagtccttttgcaattccattgataatgct 431  Q
    ||||| |||||||  || ||||| || |||||||||||||||||    
T  15692767 tcatggaggtataaaagacctttagctattccattgataatgct 15692810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 15692450 - 15692523
Alignment:
Q  79 actccaaagctgaaaacatcagatttcactgaaaataagccagccatagcatattctggagccatgtatccact 152  Q
    |||||||||||||| ||||| | |||||| |||||||  ||  |||| || |||||||| ||||||||||||||    
T  15692450 actccaaagctgaatacatcggttttcacagaaaatactccttccattgcgtattctggtgccatgtatccact 15692523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 23560286 - 23560358
Alignment:
Q  81 tccaaagctgaaaacatcagatttcactgaaaataagccagccatagcatattctggagccatgtatccactg 153  Q
    |||||| ||||| |||||||||||||| ||||| |  ||| ||  |||||||||||| |||||||| ||||||    
T  23560286 tccaaaactgaatacatcagatttcacagaaaaaagtccatccgcagcatattctggtgccatgtagccactg 23560358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 268 - 429
Target Start/End: Complemental strand, 3080539 - 3080378
Alignment:
Q  268 cattgatctttttcaaatctccttgctaatccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtgga 367  Q
    ||||| ||||||||||||  |||||| ||||||||||| ||||||||||||||||| || | |||||  |||||||| || ||||| || ||||| ||||    
T  3080539 cattggtctttttcaaatgcccttgccaatccaaaatcagatatttttggattcatctcttgatctaatagaacattacttgcttttaggtctctatgga 3080440  T
Q  368 ttactctaagtcgagaatcctcatgaaggtatagcagtccttttgcaattccattgataatg 429  Q
    |||||||||||| ||| || |||||||||||||  |||||||||||||||||||||||||||    
T  3080439 ttactctaagtctagagtcttcatgaaggtataagagtccttttgcaattccattgataatg 3080378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 270 - 451
Target Start/End: Original strand, 4547994 - 4548175
Alignment:
Q  270 ttgatctttttcaaatctccttgctaatccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggatt 369  Q
    |||| |||||||||||  |||||| ||||||||||| ||||||||||||||||| || | ||||| ||||||||| || ||||| || ||||| ||||||    
T  4547994 ttgacctttttcaaatgcccttgccaatccaaaatcagatatttttggattcatctcttgatctaaaagaacattacttgcttttaggtctctatggatt 4548093  T
Q  370 actctaagtcgagaatcctcatgaaggtatagcagtccttttgcaattccattgataatgcttcgtcgtaatctccaatcta 451  Q
    |||||||||| ||| || |||||||| || |  |||||||||||||||||||| |||||| || ||| |||  |||||||||    
T  4548094 actctaagtctagagtcttcatgaagatacaagagtccttttgcaattccattaataatgtttagtcttaagttccaatcta 4548175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 268 - 429
Target Start/End: Complemental strand, 3094976 - 3094815
Alignment:
Q  268 cattgatctttttcaaatctccttgctaatccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtgga 367  Q
    ||||| ||||||||||||  |||||| ||||||||||| ||||||||||||||||| || | |||||  |||||||| || ||||| || ||||| ||||    
T  3094976 cattggtctttttcaaatgcccttgccaatccaaaatcagatatttttggattcatctcttgatctaagagaacattacttgcttttaggtctctatgga 3094877  T
Q  368 ttactctaagtcgagaatcctcatgaaggtatagcagtccttttgcaattccattgataatg 429  Q
    ||||||| |||| ||| || |||||||| || |  |||||||||||||||||||||||||||    
T  3094876 ttactcttagtctagagtcttcatgaagatacaagagtccttttgcaattccattgataatg 3094815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 3080814 - 3080666
Alignment:
Q  7 agaagactttgcctatgttctgaaagaaagaattcgccatttctttttccgtaaataatttctaatacaagaactccaaagctgaaaacatcagatttca 106  Q
    ||||||||||| | ||| || |  ||| ||||| | ||||| ||| ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  3080814 agaagactttgaccatgctccgcgagatagaatccaccattccttcttccgcaaattatttctaataaaagaactccaaagctgaaaacatcagatttca 3080715  T
Q  107 ctgaaaataagccagccatagcatattctggagccatgtatccactgta 155  Q
    | ||| |||| ||  ||||||| || ||||| |||||||||||||||||    
T  3080714 cagaatataacccttccatagcgtactctggtgccatgtatccactgta 3080666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 3095251 - 3095103
Alignment:
Q  7 agaagactttgcctatgttctgaaagaaagaattcgccatttctttttccgtaaataatttctaatacaagaactccaaagctgaaaacatcagatttca 106  Q
    ||||||||||| | ||| || |  ||| ||||| | ||||| ||| ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  3095251 agaagactttgaccatgctccgcgagatagaatccaccattccttcttccgcaaattatttctaataaaagaactccaaagctgaaaacatcagatttca 3095152  T
Q  107 ctgaaaataagccagccatagcatattctggagccatgtatccactgta 155  Q
    | ||| |||| ||  ||||||| || ||||| |||||||||||||||||    
T  3095151 cagaatataacccttccatagcgtactctggtgccatgtatccactgta 3095103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 428
Target Start/End: Complemental strand, 3102484 - 3102353
Alignment:
Q  297 tccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggattactctaagtcgagaatcctcatgaagg 396  Q
    |||||||||||| ||||||||||||||||| | |||||  |||| |||||| |||||||| |||||||| || ||||| || | ||| |||||||||||     
T  3102484 tccaaaatctgagatttttggattcatttcttgatctaatagaatattgctagctttcaggtctctgtgaataactctgagcctagagtcctcatgaaga 3102385  T
Q  397 tatagcagtccttttgcaattccattgataat 428  Q
    ||||| || ||||| ||||| ||||| |||||    
T  3102384 tatagaagccctttagcaatcccattaataat 3102353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 3123088 - 3123010
Alignment:
Q  75 aagaactccaaagctgaaaacatcagatttcactgaaaataagccagccatagcatattctggagccatgtatccactg 153  Q
    |||||| ||||||||||||||||| || ||||||||||| |||||  | ||||||||||||||||||||||||||||||    
T  3123088 aagaacgccaaagctgaaaacatctgacttcactgaaaacaagccttcgatagcatattctggagccatgtatccactg 3123010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 153
Target Start/End: Original strand, 4547704 - 4547850
Alignment:
Q  7 agaagactttgcctatgttctgaaagaaagaattcgccatttctttttccgtaaataatttctaatacaagaactccaaagctgaaaacatcagatttca 106  Q
    ||||||||||| | |||||||   ||| ||||| | |||||  |||||||  |||| |||||||||| |||||||||| | ||||||||||| | |||||    
T  4547704 agaagactttgaccatgttcttcgagatagaatccaccattcttttttccacaaattatttctaataaaagaactccataactgaaaacatctgttttca 4547803  T
Q  107 ctgaaaataagccagccatagcatattctggagccatgtatccactg 153  Q
    ||||| |||| ||  ||||||| ||||||||||||||||| ||||||    
T  4547804 ctgaatataacccttccatagcgtattctggagccatgtaaccactg 4547850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 289 - 429
Target Start/End: Complemental strand, 3122620 - 3122480
Alignment:
Q  289 cttgctaatccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggattactctaagtcgagaatcct 388  Q
    ||||||| |||||| ||||| ||||||||||||||||||| |||||  | || ||||||||||||||| |||||||| || || || |||| ||| ||||    
T  3122620 cttgctagtccaaagtctgaaatttttggattcatttcatgatctaacaaaatattgctggctttcaggtctctgtgaataaccctgagtctagagtcct 3122521  T
Q  389 catgaaggtatagcagtccttttgcaattccattgataatg 429  Q
    | ||||| || || || ||||| ||||| ||||| ||||||    
T  3122520 cgtgaagatagagtagccctttagcaatcccattaataatg 3122480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 3103557 - 3103479
Alignment:
Q  75 aagaactccaaagctgaaaacatcagatttcactgaaaataagccagccatagcatattctggagccatgtatccactg 153  Q
    |||||| ||||||||||||||||| || || |||||||| || ||  |||||||||||||||||||||| |||||||||    
T  3103557 aagaacaccaaagctgaaaacatctgactttactgaaaacaatccttccatagcatattctggagccatatatccactg 3103479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 3132760 - 3132840
Alignment:
Q  75 aagaactccaaagctgaaaacatcagatttcactgaaaataagccagccatagc--atattctggagccatgtatccactg 153  Q
    |||||| ||||||||||||||||| || ||||||||||| |||||  | |||||  |||||||||||||||||||||||||    
T  3132760 aagaacgccaaagctgaaaacatctgacttcactgaaaacaagccttcgatagcatatattctggagccatgtatccactg 3132840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 20341899 - 20341973
Alignment:
Q  79 actccaaagctgaaaacatcagatttcactgaaaataagccagccatagcatattctggagccatgtatccactg 153  Q
    |||||||| || |||||||||||||| | ||| ||| | |||  || |||||||||||||| |||||||||||||    
T  20341899 actccaaaactaaaaacatcagattttattgagaatgatccatgcacagcatattctggaggcatgtatccactg 20341973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 36370619 - 36370555
Alignment:
Q  298 ccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctct 362  Q
    ||||||||||| ||||| |||||||||||| |||| || ||||||||||||||||| ||||||||    
T  36370619 ccaaaatctgagattttgggattcatttcagcatcaaggagaacattgctggcttttagatctct 36370555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 301 - 362
Target Start/End: Complemental strand, 36399821 - 36399760
Alignment:
Q  301 aaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctct 362  Q
    |||||||| ||||| |||||||||||| |||| || ||||||||||||||||| ||||||||    
T  36399821 aaatctgagattttgggattcatttcagcatcaaggagaacattgctggcttttagatctct 36399760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 36366749 - 36366669
Alignment:
Q  73 acaagaactccaaagctgaaaacatcagatttcactgaaaataagccagccatagcatattctggagccatgtatccactg 153  Q
    |||||||| ||||| ||||||||||||||||||||||| || |  ||| |||||||||| ||||||| ||| || ||||||    
T  36366749 acaagaacaccaaaactgaaaacatcagatttcactgagaagattccatccatagcatactctggagacatatagccactg 36366669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 36435889 - 36435825
Alignment:
Q  298 ccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctct 362  Q
    ||||||||||| ||||| ||||||||| || |||| || ||||||||||||||||| ||||||||    
T  36435889 ccaaaatctgagattttgggattcattgcagcatcaaggagaacattgctggcttttagatctct 36435825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 31717739 - 31717667
Alignment:
Q  295 aatccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtgga 367  Q
    ||||||||||||||||||||||||||||    ||||||||| | ||||||||||  ||| |||||||| ||||    
T  31717739 aatccaaaatctgatatttttggattcaaagtatcatctagtaaaacattgctgcttttgagatctctatgga 31717667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 31733347 - 31733279
Alignment:
Q  85 aagctgaaaacatcagatttcactgaaaataagccagccatagcatattctggagccatgtatccactg 153  Q
    ||||| ||||| ||||||||||| |||||||| ||| | | |||||||||||| |||||||| ||||||    
T  31733347 aagctaaaaacgtcagatttcaccgaaaataatccatcaacagcatattctggtgccatgtacccactg 31733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 36376391 - 36376327
Alignment:
Q  298 ccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctct 362  Q
    ||||||||||| ||||| ||||||||| || |||| || ||||| ||||||||||| ||||||||    
T  36376391 ccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagatctct 36376327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 36407281 - 36407217
Alignment:
Q  298 ccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctct 362  Q
    ||||||||||| ||||| ||||||||| || | || || ||||||||||||||||| ||||||||    
T  36407281 ccaaaatctgagattttgggattcattgcagcgtcaaggagaacattgctggcttttagatctct 36407217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 36412404 - 36412340
Alignment:
Q  298 ccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctct 362  Q
    ||||||||||| ||||| ||||||||| || | || || ||||||||||||||||| ||||||||    
T  36412404 ccaaaatctgagattttgggattcattgcagcgtcaaggagaacattgctggcttttagatctct 36412340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 370
Target Start/End: Complemental strand, 36419443 - 36419371
Alignment:
Q  298 ccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggatta 370  Q
    |||||||| || ||||| ||||||||| || |||| || ||||| ||||||||||| |||||||| |||||||    
T  36419443 ccaaaatccgagattttgggattcattacagcatcaaggagaacgttgctggcttttagatctctatggatta 36419371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 36429436 - 36429372
Alignment:
Q  298 ccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctct 362  Q
    ||||||||||| ||||| ||||||||| || |||| || ||||| ||||||||||| ||||||||    
T  36429436 ccaaaatctgagattttgggattcattgcagcatcgaggagaacgttgctggcttttagatctct 36429372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 31702641 - 31702570
Alignment:
Q  82 ccaaagctgaaaacatcagatttcactgaaaataagccagccatagcatattctggagccatgtatccactg 153  Q
    ||||||||||||||||| |||||||| ||||||   ||| | |||||||| ||||| |||||||| ||||||    
T  31702641 ccaaagctgaaaacatccgatttcacggaaaattgtccatcaatagcatactctggtgccatgtacccactg 31702570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 31724964 - 31724911
Alignment:
Q  295 aatccaaaatctgatatttttggattcatttcatcatctagaagaacattgctg 348  Q
    ||||||||||||||||||||||||||||    ||||||||| | ||||||||||    
T  31724964 aatccaaaatctgatatttttggattcaaagtatcatctagtaaaacattgctg 31724911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 31740927 - 31740835
Alignment:
Q  61 ataatttctaatacaagaactccaaagctgaaaacatcagatttcactgaaaataagccagccatagcatattctggagccatgtatccactg 153  Q
    ||||||||||| |  | || ||||||||| ||||||||||||||||| ||||| ||  || | | |||||| || || |||||||||||||||    
T  31740927 ataatttctaacaataaaattccaaagctaaaaacatcagatttcaccgaaaacaattcatcaacagcatactcgggtgccatgtatccactg 31740835  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 2662487 - 2662569
Alignment:
Q  297 tccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggattactctaagtc 379  Q
    |||||| || || |||||||||||||||||  |||||| |||||||||||| ||||| |||||||| || |||| ||| ||||    
T  2662487 tccaaagtcagaaatttttggattcatttcgccatctaaaagaacattgcttgcttttagatctctatgaattattcttagtc 2662569  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 368
Target Start/End: Complemental strand, 2672548 - 2672478
Alignment:
Q  298 ccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggat 368  Q
    |||||||||||||| |||||||||||||| | ||| || ||||||||||| || || ||||| ||||||||    
T  2672548 ccaaaatctgatatctttggattcatttctttatcaagtagaacattgcttgccttgagatccctgtggat 2672478  T

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Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 2672788 - 2672715
Alignment:
Q  76 agaactccaaagctgaaaacatcagatttcactgaaaataagccagccatagcatattctggagccatgtatcc 149  Q
    ||||||||||| |||||||||||||||||| | |||||  | ||| |||| ||||||||||||| ||| |||||    
T  2672788 agaactccaaaactgaaaacatcagatttcgcagaaaaatatccacccattgcatattctggagacatatatcc 2672715  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 368
Target Start/End: Original strand, 34192574 - 34192638
Alignment:
Q  304 tctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggat 368  Q
    ||||||||||| |||||||| |  || |||||||||| ||||||||  || ||||||||||||||    
T  34192574 tctgatattttaggattcatattttcgtctagaagaatattgctggtcttgagatctctgtggat 34192638  T

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Target: chr1 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 379
Target Start/End: Original strand, 21917947 - 21918037
Alignment:
Q  289 cttgctaatccaaaatctgatatttttggattcatttcatcatctagaagaacattgctggctttcagatctctgtggattactctaagtc 379  Q
    ||||||| |||||||||||| |||||||| | ||| || |||||||||||||  ||||| | ||||| ||||| ||| || ||||||||||    
T  21917947 cttgctattccaaaatctgagatttttggttgcatctcctcatctagaagaatgttgctagttttcaaatctcggtgaataactctaagtc 21918037  T

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Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 482817 - 482884
Alignment:
Q  85 aagctgaaaacatcagatttcactgaaaataagccagccatagcatattctggagccatgtatccact 152  Q
    |||||||| |||||||||||||| || ||||  ||  |||| ||||||||||||||||| ||||||||    
T  482817 aagctgaagacatcagatttcacggagaatagtccttccattgcatattctggagccatatatccact 482884  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 334
Target Start/End: Original strand, 470065 - 470110
Alignment:
Q  289 cttgctaatccaaaatctgatatttttggattcatttcatcatcta 334  Q
    ||||| || ||||||||||||||||||||||||||||  |||||||    
T  470065 cttgccaaaccaaaatctgatatttttggattcattttgtcatcta 470110  T

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