View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11537_high_55 (Length: 265)
Name: NF11537_high_55
Description: NF11537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11537_high_55 |
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Alignment Details
Target: chr8 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 41222246 - 41222445
Alignment:
| Q |
1 |
tggtcttgttaaagttcctctgtgttctcttagctctgtacttggaaannnnnnnnnnnnnnnnnnncgcactataacgacctactttgaaattttgttc |
100 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
41222246 |
tggtcttgttgaagttcctctgtgttctcttagctctgtacttggaaattttttcttttctttcttccgcactataacgacctactttgaaattttgttc |
41222345 |
T |
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| Q |
101 |
ctcttgcaaattcccctctgttggagacatattattttctttcatgttctgtttcaaagactaaacaaacttcaataaaatcaactttggaaaaatgaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41222346 |
ctcttgcaaattcccctctgttggagacatattattttctttcatgttctgtttcaaagactaaacaaacttcaataaaatcaactttggaaaaatgaag |
41222445 |
T |
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