View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11537_low_19 (Length: 448)
Name: NF11537_low_19
Description: NF11537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11537_low_19 |
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Alignment Details
Target: chr6 (Bit Score: 377; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 1 - 430
Target Start/End: Original strand, 7002754 - 7003182
Alignment:
| Q |
1 |
atgtattttagtctctacacgttaaagaccgacatctatcagttactcgcaaacctaaattaatcaagttttattagatcactttgtaattgagcttagt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7002754 |
atgtattttagtctctacacgttaaagaccgacatctatcagttactcgcaaacctaaattaatcaagttttattagatcactttgtaattgagcttagt |
7002853 |
T |
|
| Q |
101 |
acataatacatgttgtattaatgacccaaaaatgttctcctagacttaatgtacaaatatatcacttctggccaaaatgaactctgtcttgtaattatcc |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7002854 |
acataatacatgttggattaatgacccaaaaatgttctcctagacttaatgtacaaatatatcacttctggccaaaatgaactctgtcttgtaattatcc |
7002953 |
T |
|
| Q |
201 |
tttttatgcctgccagagttatatccatcttacaatctacagatttgattccatcgccaaaacaaaaccagcctcatcattgcttcatctttcattcggt |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7002954 |
-ttttatgcctgccagagttatatccatcttacaatctacagatttgattccatcgccaaaacaaaaccagcctcatcattgcttcatctttcattcggt |
7003052 |
T |
|
| Q |
301 |
gactttgttctcttctgctgatccccttacatttccttnnnnnnntaattcgatatatgatccaatgaccgattaatctaaggattcaattcaactgttc |
400 |
Q |
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|||||||||||||||||||||||||||||||| ||||| ||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| |
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| T |
7003053 |
gactttgttctcttctgctgatccccttacatatccttaaaaaaataattcggtatctgatccaatgaccgattaatctaaggatccaattcaactgttc |
7003152 |
T |
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| Q |
401 |
ccttacattgccacattttatagtattggc |
430 |
Q |
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||||||||||||||||||| |||||||||| |
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| T |
7003153 |
ccttacattgccacattttgtagtattggc |
7003182 |
T |
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