View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11538_high_111 (Length: 238)
Name: NF11538_high_111
Description: NF11538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11538_high_111 |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 4690725 - 4690932
Alignment:
| Q |
14 |
catagggaggataagaagggtcaaccacccaacttcctacgaacaaattgcacccatttgttactactggctttttccctcttaagctacttacattatg |
113 |
Q |
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| T |
4690725 |
catagagaggataagaagggtcaaccacccaacttcctatgaacaaattgcacccatttgttactactggctttttccctcttaagctacttacattatg |
4690824 |
T |
|
| Q |
114 |
gaactttgcttcaccaagtagaagttgatgaaaaagtgagaatagaagaagcagagtaattgctctgaaacccatttgagatttgccttgaattgaatga |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4690825 |
gaactttgcttcaccaagtagaagttgatgaaaaagtgagaatagaagaagcagagtaattgctctgaaacccatttgagatttgccttgaattgaatga |
4690924 |
T |
|
| Q |
214 |
aacttgtg |
221 |
Q |
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|||||||| |
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| T |
4690925 |
aacttgtg |
4690932 |
T |
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