View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11538_high_26 (Length: 519)

Name: NF11538_high_26
Description: NF11538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11538_high_26
NF11538_high_26
[»] chr6 (28 HSPs)
chr6 (8-389)||(30381535-30381912)
chr6 (458-519)||(30381405-30381466)
chr6 (458-508)||(30437716-30437766)
chr6 (458-519)||(30420199-30420260)
chr6 (5-47)||(30381940-30381982)
chr6 (301-359)||(31851757-31851815)
chr6 (159-262)||(13357448-13357550)
chr6 (225-262)||(2852663-2852700)
chr6 (310-351)||(7054292-7054333)
chr6 (159-268)||(24325606-24325711)
chr6 (310-358)||(7922317-7922365)
chr6 (159-207)||(16206876-16206923)
chr6 (310-360)||(10827229-10827280)
chr6 (301-356)||(13114625-13114680)
chr6 (159-260)||(29942306-29942407)
chr6 (320-363)||(29964457-29964500)
chr6 (312-358)||(13114398-13114444)
chr6 (310-360)||(16659512-16659562)
chr6 (301-359)||(22574030-22574088)
chr6 (159-262)||(34715776-34715876)
chr6 (159-208)||(1319264-1319313)
chr6 (159-208)||(3593488-3593537)
chr6 (159-208)||(25400636-25400684)
chr6 (472-509)||(30471821-30471858)
chr6 (217-262)||(33561877-33561921)
chr6 (469-517)||(9237868-9237916)
chr6 (312-356)||(10546190-10546234)
chr6 (222-262)||(24062320-24062359)
[»] chr3 (23 HSPs)
chr3 (301-359)||(19624010-19624068)
chr3 (159-262)||(3548216-3548319)
chr3 (162-262)||(12767032-12767130)
chr3 (301-359)||(25110061-25110119)
chr3 (310-358)||(3548364-3548413)
chr3 (159-208)||(29313879-29313928)
chr3 (159-208)||(30271637-30271686)
chr3 (301-370)||(45151938-45152006)
chr3 (159-208)||(49872864-49872913)
chr3 (159-207)||(43767753-43767800)
chr3 (312-359)||(14220697-14220744)
chr3 (312-359)||(14224924-14224971)
chr3 (312-359)||(15309083-15309129)
chr3 (311-358)||(47115572-47115619)
chr3 (301-363)||(3072416-3072477)
chr3 (159-201)||(3072570-3072612)
chr3 (310-360)||(49872958-49873008)
chr3 (217-262)||(20957042-20957086)
chr3 (159-208)||(25109977-25110026)
chr3 (159-208)||(27432734-27432783)
chr3 (159-208)||(51460626-51460674)
chr3 (301-360)||(5205354-5205414)
chr3 (159-207)||(8355482-8355530)
[»] chr2 (49 HSPs)
chr2 (159-262)||(22535545-22535646)
chr2 (310-360)||(20182262-20182312)
chr2 (301-345)||(32596418-32596462)
chr2 (310-358)||(33641132-33641180)
chr2 (159-262)||(25227919-25228022)
chr2 (159-262)||(28149528-28149630)
chr2 (312-363)||(38386170-38386221)
chr2 (159-262)||(43301976-43302078)
chr2 (311-358)||(43302123-43302170)
chr2 (312-362)||(3364323-3364373)
chr2 (159-261)||(20182352-20182454)
chr2 (310-360)||(22116153-22116203)
chr2 (310-360)||(33315434-33315484)
chr2 (311-360)||(25077661-25077710)
chr2 (159-207)||(1499029-1499077)
chr2 (312-360)||(19493459-19493507)
chr2 (308-360)||(26270489-26270540)
chr2 (310-358)||(28149675-28149723)
chr2 (301-369)||(34635695-34635763)
chr2 (312-360)||(45464622-45464670)
chr2 (312-359)||(1975811-1975858)
chr2 (159-262)||(27866290-27866387)
chr2 (301-359)||(17328091-17328149)
chr2 (311-357)||(18701552-18701598)
chr2 (225-283)||(27866350-27866407)
chr2 (308-358)||(37200347-37200396)
chr2 (301-359)||(39094198-39094255)
chr2 (159-208)||(3364476-3364525)
chr2 (159-208)||(16577208-16577257)
chr2 (159-208)||(17328185-17328234)
chr2 (301-358)||(19641446-19641503)
chr2 (301-358)||(19840039-19840096)
chr2 (311-360)||(25077426-25077474)
chr2 (320-357)||(25926889-25926926)
chr2 (159-208)||(27010058-27010106)
chr2 (162-207)||(29835247-29835292)
chr2 (159-208)||(32449836-32449884)
chr2 (217-262)||(34635860-34635904)
chr2 (159-208)||(37147644-37147693)
chr2 (217-262)||(39227946-39227990)
chr2 (320-360)||(16577366-16577406)
chr2 (222-262)||(18555672-18555711)
chr2 (320-360)||(18555826-18555866)
chr2 (159-207)||(25926977-25927024)
chr2 (218-262)||(28484453-28484496)
chr2 (312-360)||(33869452-33869499)
chr2 (310-358)||(37147551-37147599)
chr2 (218-262)||(38386082-38386125)
chr2 (225-269)||(43302041-43302084)
[»] scaffold0113 (1 HSPs)
scaffold0113 (301-356)||(28883-28938)
[»] chr8 (39 HSPs)
chr8 (159-262)||(27198238-27198338)
chr8 (301-359)||(14329600-14329658)
chr8 (159-262)||(43121173-43121274)
chr8 (310-359)||(27198143-27198192)
chr8 (159-208)||(14329515-14329564)
chr8 (159-208)||(25277567-25277616)
chr8 (310-359)||(29309783-29309832)
chr8 (159-208)||(38500428-38500477)
chr8 (301-360)||(4482280-4482340)
chr8 (159-207)||(8388210-8388258)
chr8 (159-207)||(17812044-17812092)
chr8 (301-357)||(38500514-38500569)
chr8 (159-207)||(41565366-41565414)
chr8 (308-359)||(43121317-43121369)
chr8 (301-364)||(13572534-13572597)
chr8 (301-360)||(39451503-39451562)
chr8 (310-357)||(43400910-43400957)
chr8 (308-358)||(960504-960554)
chr8 (301-355)||(8388117-8388171)
chr8 (311-360)||(12317529-12317579)
chr8 (311-369)||(23389349-23389407)
chr8 (159-262)||(27543486-27543587)
chr8 (301-359)||(29309564-29309622)
chr8 (310-359)||(3912489-3912538)
chr8 (310-359)||(4482044-4482093)
chr8 (159-208)||(4482194-4482243)
chr8 (159-204)||(7988942-7988987)
chr8 (312-360)||(13567236-13567285)
chr8 (482-519)||(20540257-20540294)
chr8 (310-359)||(25277715-25277764)
chr8 (217-262)||(25601808-25601852)
chr8 (310-359)||(27987296-27987345)
chr8 (310-359)||(28044598-28044647)
chr8 (312-357)||(42406224-42406269)
chr8 (308-360)||(2873772-2873824)
chr8 (320-360)||(12330331-12330371)
chr8 (301-368)||(27637386-27637454)
chr8 (312-356)||(35773150-35773194)
chr8 (180-208)||(40770640-40770668)
[»] chr4 (32 HSPs)
chr4 (301-360)||(39868466-39868525)
chr4 (301-358)||(14574926-14574984)
chr4 (310-359)||(22272929-22272978)
chr4 (310-359)||(21780121-21780170)
chr4 (159-207)||(45900701-45900749)
chr4 (159-262)||(19875838-19875935)
chr4 (325-359)||(6595268-6595302)
chr4 (301-358)||(7272266-7272324)
chr4 (312-358)||(46094251-46094297)
chr4 (312-358)||(50138488-50138534)
chr4 (159-208)||(5401856-5401905)
chr4 (319-360)||(9001442-9001483)
chr4 (159-208)||(16482202-16482251)
chr4 (217-262)||(17289895-17289939)
chr4 (159-204)||(18454287-18454332)
chr4 (313-358)||(21798577-21798622)
chr4 (159-208)||(27579659-27579707)
chr4 (310-359)||(35539603-35539652)
chr4 (159-208)||(43751139-43751187)
chr4 (159-208)||(50727645-50727694)
chr4 (159-208)||(50735659-50735708)
chr4 (159-204)||(55363841-55363886)
chr4 (159-208)||(56467507-56467555)
chr4 (469-517)||(15158594-15158642)
chr4 (222-262)||(18320556-18320595)
chr4 (311-359)||(26799932-26799980)
chr4 (308-336)||(32682198-32682226)
chr4 (312-360)||(35539791-35539839)
chr4 (312-360)||(40479527-40479575)
chr4 (320-360)||(50727588-50727628)
chr4 (320-360)||(50735602-50735642)
chr4 (159-207)||(53231867-53231915)
[»] scaffold0005 (1 HSPs)
scaffold0005 (301-358)||(242391-242449)
[»] chr7 (34 HSPs)
chr7 (159-262)||(20040994-20041096)
chr7 (159-260)||(19272311-19272411)
chr7 (312-359)||(48945183-48945230)
chr7 (159-208)||(31186762-31186811)
chr7 (312-360)||(31186666-31186714)
chr7 (312-359)||(9915650-9915697)
chr7 (312-359)||(9923562-9923609)
chr7 (312-363)||(26050170-26050221)
chr7 (159-262)||(26050266-26050368)
chr7 (312-363)||(26059529-26059580)
chr7 (159-262)||(26059625-26059727)
chr7 (312-358)||(13279428-13279474)
chr7 (310-360)||(24845636-24845686)
chr7 (460-518)||(33993218-33993276)
chr7 (312-358)||(35158183-35158229)
chr7 (308-358)||(39580173-39580223)
chr7 (162-207)||(3307541-3307586)
chr7 (310-359)||(6269527-6269576)
chr7 (310-359)||(19272458-19272507)
chr7 (159-208)||(23371596-23371644)
chr7 (310-359)||(34258432-34258481)
chr7 (159-208)||(43251603-43251651)
chr7 (311-360)||(44569088-44569137)
chr7 (159-208)||(45164006-45164055)
chr7 (320-360)||(10980615-10980655)
chr7 (159-207)||(16902197-16902244)
chr7 (301-360)||(20041135-20041195)
chr7 (311-359)||(21298255-21298303)
chr7 (222-262)||(24205275-24205314)
chr7 (222-262)||(24206793-24206832)
chr7 (320-360)||(24555920-24555960)
chr7 (312-360)||(29141168-29141216)
chr7 (316-356)||(34731640-34731680)
chr7 (310-358)||(48104737-48104785)
[»] chr5 (34 HSPs)
chr5 (301-363)||(12399586-12399648)
chr5 (159-207)||(711332-711380)
chr5 (159-262)||(5718321-5718424)
chr5 (308-359)||(35798690-35798741)
chr5 (159-208)||(5747411-5747460)
chr5 (310-367)||(10976756-10976813)
chr5 (159-208)||(20688888-20688937)
chr5 (159-208)||(31861584-31861633)
chr5 (311-360)||(37204990-37205039)
chr5 (217-262)||(39153543-39153587)
chr5 (310-361)||(23188626-23188677)
chr5 (312-359)||(31861490-31861537)
chr5 (312-358)||(10012817-10012863)
chr5 (159-208)||(21148891-21148941)
chr5 (159-208)||(24098526-24098573)
chr5 (312-361)||(29321318-29321368)
chr5 (312-358)||(36992994-36993040)
chr5 (469-518)||(14092173-14092222)
chr5 (159-208)||(16504868-16504916)
chr5 (159-208)||(20698436-20698484)
chr5 (225-262)||(21149027-21149063)
chr5 (159-208)||(22551664-22551712)
chr5 (217-262)||(26034942-26034986)
chr5 (162-207)||(29754144-29754189)
chr5 (159-207)||(2870743-2870791)
chr5 (222-262)||(2870809-2870848)
chr5 (159-199)||(16304971-16305011)
chr5 (301-337)||(16504946-16504982)
chr5 (180-208)||(20076804-20076832)
chr5 (312-340)||(23159486-23159514)
chr5 (311-359)||(29104443-29104491)
chr5 (308-336)||(31567656-31567684)
chr5 (159-207)||(33658965-33659013)
chr5 (159-199)||(39153481-39153521)
[»] scaffold0740 (1 HSPs)
scaffold0740 (159-208)||(3739-3788)
[»] scaffold0021 (1 HSPs)
scaffold0021 (159-208)||(158183-158232)
[»] chr1 (30 HSPs)
chr1 (159-262)||(5330513-5330617)
chr1 (159-207)||(7112587-7112635)
chr1 (159-262)||(13509251-13509354)
chr1 (301-359)||(14909760-14909818)
chr1 (301-359)||(24963003-24963061)
chr1 (159-283)||(42847586-42847711)
chr1 (159-280)||(13545653-13545774)
chr1 (159-262)||(5348228-5348332)
chr1 (310-366)||(9439411-9439467)
chr1 (301-361)||(15336486-15336546)
chr1 (312-360)||(28410912-28410960)
chr1 (159-207)||(28724445-28724493)
chr1 (159-207)||(29018512-29018560)
chr1 (310-358)||(42736830-42736878)
chr1 (310-357)||(2472593-2472640)
chr1 (311-358)||(5330420-5330467)
chr1 (308-359)||(18458809-18458860)
chr1 (311-358)||(35034305-35034352)
chr1 (225-283)||(13545737-13545794)
chr1 (310-360)||(41190158-41190208)
chr1 (159-208)||(18458719-18458768)
chr1 (312-369)||(22604673-22604730)
chr1 (217-262)||(33573797-33573841)
chr1 (159-208)||(40498172-40498221)
chr1 (217-262)||(42736683-42736727)
chr1 (222-262)||(4646852-4646891)
chr1 (315-355)||(15336867-15336907)
chr1 (312-360)||(24987606-24987654)
chr1 (311-358)||(26743048-26743096)
chr1 (312-360)||(32131914-32131962)
[»] scaffold0068 (2 HSPs)
scaffold0068 (159-262)||(38700-38802)
scaffold0068 (310-358)||(38612-38660)
[»] scaffold0010 (3 HSPs)
scaffold0010 (310-360)||(26542-26592)
scaffold0010 (310-358)||(26308-26356)
scaffold0010 (159-262)||(26400-26498)
[»] scaffold0041 (1 HSPs)
scaffold0041 (159-208)||(38142-38190)
[»] scaffold0769 (2 HSPs)
scaffold0769 (301-369)||(4151-4219)
scaffold0769 (217-262)||(4010-4054)
[»] scaffold0032 (1 HSPs)
scaffold0032 (301-345)||(71665-71709)
[»] scaffold0136 (1 HSPs)
scaffold0136 (301-360)||(636-695)
[»] scaffold0095 (1 HSPs)
scaffold0095 (301-360)||(10353-10412)
[»] scaffold0727 (2 HSPs)
scaffold0727 (320-357)||(837-874)
scaffold0727 (159-207)||(925-972)
[»] scaffold0450 (1 HSPs)
scaffold0450 (159-208)||(8010-8059)
[»] scaffold0384 (1 HSPs)
scaffold0384 (313-358)||(4439-4484)
[»] scaffold0246 (2 HSPs)
scaffold0246 (328-368)||(15862-15902)
scaffold0246 (312-360)||(17466-17514)


Alignment Details
Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 389
Target Start/End: Complemental strand, 30381912 - 30381535
Alignment:
Q  8 gaagttattatttattaaaaattaataatatggtactaatgatctgttgaagttacaaagatcaaactctcaggcctgacctgacatcttacgtacatcc 107  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  30381912 gaagtttttatttattaaaaattaataatatggtactaatgatatgttgaagttataa-gatcaaactcttaggcctgacctgacatcttacgtacatcc 30381814  T
Q  108 taataagttttatgcaaactcaattaatgttgaattcgactc--tnnnnnnnnttgttttgatttatccctctgataggctaaacaaaaacgaaaa-ttt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||  |        ||||||||||||| |||||| |||||| ||||||||||||||| |||    
T  30381813 taataagttttatgcaaactcaattaatgttgaattcgactcttttaaaaaaattgttttgatttacccctctaataggccaaacaaaaacgaaaatttt 30381714  T
Q  205 cttgnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatcaaaacagatttttgttaaagggggtaattnnnnnnnnnnnnnnnttac 304  Q
    ||||        |||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |               ||||    
T  30381713 cttgaaaaaaaataaaattggtttttgtttggcc-tattaggggagtaaatcaaaacagattttttttaaagggggtaaat-----aaataaaaaattac 30381620  T
Q  305 agtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccctagaatttatactagctctgccactaatttg 389  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  30381619 agtgaggaaaaccgaaaataacctatattacaggggataaagacctattaaccttagaatttatactagctctgccactaatttg 30381535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 30381466 - 30381405
Alignment:
Q  458 gatgggtgtgtcaagtgcactagacacattttgtggtcaagcatatggagcaaaacaatatc 519  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30381466 gatgggtgtgtcaagtgcactagacacattttgtggtcaagcatatggagcaaagcaatatc 30381405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 458 - 508
Target Start/End: Complemental strand, 30437766 - 30437716
Alignment:
Q  458 gatgggtgtgtcaagtgcactagacacattttgtggtcaagcatatggagc 508  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30437766 gatgggtatgtcaagtgcactagacacattttgtggtcaagcatatggagc 30437716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 458 - 519
Target Start/End: Complemental strand, 30420260 - 30420199
Alignment:
Q  458 gatgggtgtgtcaagtgcactagacacattttgtggtcaagcatatggagcaaaacaatatc 519  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  30420260 gatgggtatgtcaagtgcattagacacattttgtgggcaagcatatggagcacaacaatatc 30420199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 30381982 - 30381940
Alignment:
Q  5 ggggaagttattatttattaaaaattaataatatggtactaat 47  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  30381982 ggggaagttattatttgttaaaaattaataatatggtactaat 30381940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 31851815 - 31851757
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||| | |||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  31851815 ttacaggggggaaaaccgaaaatgacctatattacaggggataaagacctattaaccct 31851757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 13357448 - 13357550
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatcaa 258  Q
    ||||||||||||| ||| || |||||| |||||||||||||||||| |          |||| ||||||||||||||||| ||||||||| |||||||||    
T  13357448 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttttgaaaaaaaaataaaattggtttttgtttggcc-tattaggggcgtaaatcaa 13357546  T
Q  259 aaca 262  Q
    ||||    
T  13357547 aaca 13357550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 225 - 262
Target Start/End: Complemental strand, 2852700 - 2852663
Alignment:
Q  225 gtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||||||||||||||||||||||| |||||||||||||    
T  2852700 gtttttgtttggccttattaggggggtaaatcaaaaca 2852663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 310 - 351
Target Start/End: Original strand, 7054292 - 7054333
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaaccta 351  Q
    |||||||||||||| ||||||||||||||||||||| |||||    
T  7054292 ggaaaaccgaaaatgacctatattacagaggataaagaccta 7054333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 268
Target Start/End: Original strand, 24325606 - 24325711
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatcaa 258  Q
    ||||||||||||| | |||| |||||| |||||||||||||||||||||          ||| ||||||||||||||||| ||||||||  |||||||||    
T  24325606 ttgttttgatttacctctctaataggccaaacaaaaacgaaaatttcttataaaaa---aaaattggtttttgtttggcc-tattagggaggtaaatcaa 24325701  T
Q  259 aacagatttt 268  Q
    |||| |||||    
T  24325702 aacaaatttt 24325711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 358
Target Start/End: Complemental strand, 7922365 - 7922317
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    |||||||| ||||| ||||||||||||| ||||||| ||||||||||||    
T  7922365 ggaaaaccaaaaatgacctatattacaggggataaagacctattaaccc 7922317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 16206923 - 16206876
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  16206923 ttgttttgatttacccc-ctaataggctaaacaaaaacgaaaatttctt 16206876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 10827229 - 10827280
Alignment:
Q  310 ggaaaaccgaaaataacctatattacag-aggataaaaacctattaacccta 360  Q
    |||||||| |||||||| |||||||||| |||||||| ||||||||||||||    
T  10827229 ggaaaaccaaaaataacatatattacaggaggataaagacctattaacccta 10827280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 356
Target Start/End: Original strand, 13114625 - 13114680
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaac 356  Q
    |||||| |||||||||||||||| || |||||||||| || |||| ||||||||||    
T  13114625 ttacagggaggaaaaccgaaaatgacatatattacagggggtaaagacctattaac 13114680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 29942306 - 29942407
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg--nnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatc 256  Q
    ||||||||||||| ||| || ||||||||||||||| |||||||||||||          |||| ||||||||||||||||| ||||||||| |||||||    
T  29942306 ttgttttgatttacccc-ctaataggctaaacaaaaccgaaaatttcttgaaaaaaataataaaattggtttttgtttggcc-tattaggggggtaaatc 29942403  T
Q  257 aaaa 260  Q
    ||||    
T  29942404 aaaa 29942407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 363
Target Start/End: Complemental strand, 29964500 - 29964457
Alignment:
Q  320 aaataacctatattacagaggataaaaacctattaaccctagaa 363  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||    
T  29964500 aaatgacctatattacaggggataaaaagctattaaccctagaa 29964457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 13114444 - 13114398
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    |||||||||||| ||||||||||||| || |||| ||||||||||||    
T  13114444 aaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 13114398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 360
Target Start/End: Complemental strand, 16659562 - 16659512
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    ||||||||| |||| |||||||||||||||| |||||  ||||||||||||    
T  16659562 ggaaaaccggaaatgacctatattacagagggtaaaatactattaacccta 16659512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 22574030 - 22574088
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||| ||||||| |||||||| | ||||||||||| || |||| |||||||||||||    
T  22574030 ttacagggaggaaatccgaaaatgatctatattacagggggtaaagacctattaaccct 22574088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 34715776 - 34715876
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatcaa 258  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||        |||| ||| ||||||||||||| | |||||||| ||||||||    
T  34715776 ttgttttgatttacccc-ctaataggccaaacaaaaacgaaaatttcttgaaaaaaaataaaattgatttttgtttggcc-tgttagggga-taaatcaa 34715872  T
Q  259 aaca 262  Q
    ||||    
T  34715873 aaca 34715876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 1319313 - 1319264
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    |||||| |||||| ||| || |||||| ||||||||||||||||||||||    
T  1319313 ttgtttcgatttacccccctaataggccaaacaaaaacgaaaatttcttg 1319264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 3593537 - 3593488
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || || ||| ||||||||||||||||||||||    
T  3593537 ttgttttgatttacccccctaatcggccaaacaaaaacgaaaatttcttg 3593488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 25400636 - 25400684
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  25400636 ttgttttgatttacccc-ctaataggccaaacaaaaacgaaaatttcttg 25400684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 472 - 509
Target Start/End: Complemental strand, 30471858 - 30471821
Alignment:
Q  472 gtgcactagacacattttgtggtcaagcatatggagca 509  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  30471858 gtgcactagaaacattttgtggtcaatcatatggagca 30471821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 33561877 - 33561921
Alignment:
Q  217 taaatttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||    
T  33561877 taaaattggtttttgtttggcc-tattaggggggtaaatcaaaaca 33561921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 469 - 517
Target Start/End: Complemental strand, 9237916 - 9237868
Alignment:
Q  469 caagtgcactagacacattttgtggtcaagcatatggagcaaaacaata 517  Q
    |||||||| | || ||| ||||||| |||||||||||||||||||||||    
T  9237916 caagtgcattggaaacactttgtggacaagcatatggagcaaaacaata 9237868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 10546190 - 10546234
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaac 356  Q
    |||||||||||| |||||||||||||||| |||||  ||||||||    
T  10546190 aaaaccgaaaatgacctatattacagagggtaaaacactattaac 10546234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 24062320 - 24062359
Alignment:
Q  222 ttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  24062320 ttggtttttgtttggcct-attaggggggtaaatcaaaaca 24062359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 19624010 - 19624068
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  19624010 ttacagagaggaaaaccgaaaatgacctatattacagaggataaagacctattaaccct 19624068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 3548319 - 3548216
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg-nnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatca 257  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||         |||| ||||||||||||||||| ||||||||| ||||||||    
T  3548319 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttcttgaaaaaaaaataaaattggtttttgtttggcc-tattaggggggtaaatca 3548221  T
Q  258 aaaca 262  Q
    |||||    
T  3548220 aaaca 3548216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 262
Target Start/End: Original strand, 12767032 - 12767130
Alignment:
Q  162 ttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatcaaaac 261  Q
    |||||||||| ||| || |||||| ||||||||||||||||||||||         ||| ||||||||||||||||| ||||||||| ||||||||||||    
T  12767032 ttttgatttacccccctaataggccaaacaaaaacgaaaatttcttgaaaaaaaaaaaaattggtttttgtttggcc-tattagggg-gtaaatcaaaac 12767129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 25110061 - 25110119
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||| |||||||||||||||| ||||||||||||| |  |||| |||||||||||||    
T  25110061 ttacagggaggaaaaccgaaaatgacctatattacagggtgtaaagacctattaaccct 25110119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 310 - 358
Target Start/End: Original strand, 3548364 - 3548413
Alignment:
Q  310 ggaaaaccgaaaataacctatattacaga-ggataaaaacctattaaccc 358  Q
    ||||||||||||||||||||||||||||| || |||| ||||||||||||    
T  3548364 ggaaaaccgaaaataacctatattacagaggggtaaagacctattaaccc 3548413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 29313879 - 29313928
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  29313879 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttcttg 29313928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 30271637 - 30271686
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  30271637 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttcttg 30271686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 45151938 - 45152006
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccctagaatttatac 370  Q
    |||||| ||||||||| |||||| |||||||||||||||| |||||  |||||||||||| ||| |||||    
T  45151938 ttacagggaggaaaactgaaaatcacctatattacagagg-taaaatactattaaccctaaaatatatac 45152006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 49872913 - 49872864
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  49872913 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttcttg 49872864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 43767753 - 43767800
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    |||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  43767753 ttgttttgatttatcc-tctaataggccaaacaaaaacgaaaatttctt 43767800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 14220697 - 14220744
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||||||||| |||||||||||||||| |||||  |||||||||||    
T  14220697 aaaaccgaaaatgacctatattacagagggtaaaatactattaaccct 14220744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 14224924 - 14224971
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||||||||| |||||||||||||||| |||||  |||||||||||    
T  14224924 aaaaccgaaaatgacctatattacagagggtaaaatactattaaccct 14224971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 15309129 - 15309083
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    ||||||| |||||||||||||||||| || ||||||||||||||||||    
T  15309129 aaaaccggaaataacctatattacag-gggtaaaaacctattaaccct 15309083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 358
Target Start/End: Original strand, 47115572 - 47115619
Alignment:
Q  311 gaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    ||||||||||||| ||||||||||||| || |||| ||||||||||||    
T  47115572 gaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 47115619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 363
Target Start/End: Complemental strand, 3072477 - 3072416
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccctagaa 363  Q
    |||||| | ||||||  |||||| |||||||||||||||| |||| |||||||||||||||||    
T  3072477 ttacagggtggaaaattgaaaatgacctatattacagagg-taaagacctattaaccctagaa 3072416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 3072612 - 3072570
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaa 201  Q
    ||||||||||||| |||||| |||||| |||||||||||||||    
T  3072612 ttgttttgatttacccctctaataggccaaacaaaaacgaaaa 3072570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 49872958 - 49873008
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    ||||||||| |||| ||||||||||||| || |||| ||||||||||||||    
T  49872958 ggaaaaccggaaatgacctatattacagggggtaaagacctattaacccta 49873008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 20957086 - 20957042
Alignment:
Q  217 taaatttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||| |||||||||||||||||| |||||||| |||||||||||||    
T  20957086 taaaattggtttttgtttggcct-attaggggggtaaatcaaaaca 20957042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 25110026 - 25109977
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||  || |||||| ||||||||||||||||||||||    
T  25110026 ttgttttgatttaccctcctaataggccaaacaaaaacgaaaatttcttg 25109977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 27432783 - 27432734
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| |||||| |||||||||||||||    
T  27432783 ttgttttgatttacccccctaataggccaaacaacaacgaaaatttcttg 27432734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 51460626 - 51460674
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  51460626 ttgttttgatttacccc-ctaataggccaaacaaaaacgaaaatttcttg 51460674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 5205354 - 5205414
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattaca-gaggataaaaacctattaacccta 360  Q
    |||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||    
T  5205354 ttacaggggggaaaaccggaaatgacctatattacaggggggtaaaaacctattaacccta 5205414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 8355530 - 8355482
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||| ||| || |||||| ||||||||| |||||||||||    
T  8355530 ttgttttgatttacccccctaataggccaaacaaaaatgaaaatttctt 8355482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 22535545 - 22535646
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatcaa 258  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||| |||        |||| ||||||||||||||||| ||||||||| |||||||||    
T  22535545 ttgttttgattta-ccctctaataggccaaacaaaaacgaaaattttttgaaaaaaaataaaattggtttttgtttggcc-tattaggggggtaaatcaa 22535642  T
Q  259 aaca 262  Q
    ||||    
T  22535643 aaca 22535646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 310 - 360
Target Start/End: Complemental strand, 20182312 - 20182262
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||||||||||    
T  20182312 ggaaaatcgaaaatgacctatattacaggggataaaaacctattaacccta 20182262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 32596462 - 32596418
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaa 345  Q
    |||||| |||||||||||||||||||||||||||||| |||||||    
T  32596462 ttacagggaggaaaaccgaaaataacctatattacaggggataaa 32596418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 358
Target Start/End: Complemental strand, 33641180 - 33641132
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    |||||||||||||| |||||||||||||||| |||| ||||||||||||    
T  33641180 ggaaaaccgaaaatgacctatattacagagggtaaagacctattaaccc 33641132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 25228022 - 25227919
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnc-taaatttggtttttgtttggccttattaggggagtaaatca 257  Q
    ||||||||| ||| ||| || |||||| ||||||||||||||||||||||         |||| |||||||||||||||||| |||||||| ||||||||    
T  25228022 ttgttttgaattacccccctaataggccaaacaaaaacgaaaatttcttgaaaaaaaaataaaattggtttttgtttggcct-attaggggggtaaatca 25227924  T
Q  258 aaaca 262  Q
    |||||    
T  25227923 aaaca 25227919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 28149630 - 28149528
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnc-taaatttggtttttgtttggccttattaggggagtaaatca 257  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||         |||| |||||||||||||||||| |||||||| ||||||||    
T  28149630 ttgttttgattta-cccactaataggccaaacaaaaacgaaaatttcttgaaaaaaaaataaaattggtttttgtttggcct-attaggggggtaaatca 28149533  T
Q  258 aaaca 262  Q
    |||||    
T  28149532 aaaca 28149528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 38386170 - 38386221
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccctagaa 363  Q
    |||||| ||||||||||||||||||| ||||||| || ||||||||||||||    
T  38386170 aaaaccaaaaataacctatattacaggggataaagacatattaaccctagaa 38386221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 43302078 - 43301976
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg-nnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatca 257  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||         |||| ||||||||||||||||| ||||||||| ||||||||    
T  43302078 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttcttgaaaaaaaagtaaaattggtttttgtttggcc-tattagggg-gtaaatca 43301981  T
Q  258 aaaca 262  Q
    |||||    
T  43301980 aaaca 43301976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 311 - 358
Target Start/End: Original strand, 43302123 - 43302170
Alignment:
Q  311 gaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  43302123 gaaaaccgaaaataacctatattacatgggataaagacctattaaccc 43302170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 3364373 - 3364323
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccctaga 362  Q
    |||||||||||| || |||||||||| ||||||| ||||||||||||||||    
T  3364373 aaaaccgaaaatgacttatattacaggggataaagacctattaaccctaga 3364323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 261
Target Start/End: Original strand, 20182352 - 20182454
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg-nnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatca 257  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||         |||| ||||||||||||||||| |||||| || ||||||||    
T  20182352 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttcttgaaaaaaaaataaaattggtttttgtttggcc-tattagaggggtaaatca 20182450  T
Q  258 aaac 261  Q
    ||||    
T  20182451 aaac 20182454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 360
Target Start/End: Complemental strand, 22116203 - 22116153
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||||||||||| ||||||||||||| || |||| ||||||||||||||    
T  22116203 ggaaaaccgaaaatgacctatattacagggggtaaagacctattaacccta 22116153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 33315434 - 33315484
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||||||||||| |||||||||||||||| |||||  ||||||||||||    
T  33315434 ggaaaaccgaaaatgacctatattacagagggtaaaatactattaacccta 33315484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 25077661 - 25077710
Alignment:
Q  311 gaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    ||||||||||||||||||||||||  | ||||||| ||||||||||||||    
T  25077661 gaaaaccgaaaataacctatattattggggataaatacctattaacccta 25077710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 1499077 - 1499029
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||||||| |||| |||| |||||||||| ||||||||||    
T  1499077 ttgttttgatttatccccctgacaggccaaacaaaaactaaaatttctt 1499029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 19493459 - 19493507
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||||||||| ||||||||||||| || |||| ||||||||||||||    
T  19493459 aaaaccgaaaatgacctatattacagggggtaaagacctattaacccta 19493507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 360
Target Start/End: Complemental strand, 26270540 - 26270489
Alignment:
Q  308 gaggaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||||| |||||||||||||||||||||||| |||| | ||||||||||||    
T  26270540 gaggaaaatcgaaaataacctatattacagagg-taaagatctattaacccta 26270489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 358
Target Start/End: Original strand, 28149675 - 28149723
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    ||||||||| |||| ||||||||||||| || |||||||||||||||||    
T  28149675 ggaaaaccggaaatgacctatattacagggggtaaaaacctattaaccc 28149723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 369
Target Start/End: Complemental strand, 34635763 - 34635695
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccctagaatttata 369  Q
    |||||| | ||||||||| |||| ||||||||||||| || |||| |||||||||||||| ||| ||||    
T  34635763 ttacaggggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccctaaaatctata 34635695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 45464622 - 45464670
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||||||||| |||||||||||||  | |||||||||||||||||||    
T  45464622 aaaaccgaaaatgacctatattacaggaggtaaaaacctattaacccta 45464670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 359
Target Start/End: Original strand, 1975811 - 1975858
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    ||||||||||||||||||||||||||| | |||||  |||||||||||    
T  1975811 aaaaccgaaaataacctatattacagaaggtaaaacactattaaccct 1975858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 27866387 - 27866290
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatcaa 258  Q
    ||||||||||||| ||| || |||||| |||||||||| |||||||||||         ||| ||||||||||||||||| ||||||||| |||||||||    
T  27866387 ttgttttgatttacccccctaataggccaaacaaaaacaaaaatttcttgaaaaa----aaaattggtttttgtttggcc-tattagggg-gtaaatcaa 27866294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 17328149 - 17328091
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||| | ||||||||| |||| ||||||||||||| || |||| |||||||||||||    
T  17328149 ttacaggggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccct 17328091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 357
Target Start/End: Complemental strand, 18701598 - 18701552
Alignment:
Q  311 gaaaaccgaaaataacctatattacagaggataaaaacctattaacc 357  Q
    ||||||| ||||| ||||||||||||| ||||||| |||||||||||    
T  18701598 gaaaaccaaaaatgacctatattacaggggataaagacctattaacc 18701552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 27866350 - 27866407
Alignment:
Q  225 gtttttgtttggccttattaggggagtaaatcaaaacagatttttgttaaagggggtaa 283  Q
    ||||||||||||||| |||||||| |||||||||||||  ||||| ||| |||||||||    
T  27866350 gtttttgtttggcct-attaggggggtaaatcaaaacaatttttttttacagggggtaa 27866407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 308 - 358
Target Start/End: Complemental strand, 37200396 - 37200347
Alignment:
Q  308 gaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    |||||||||||||||| ||||||||||||| || |||| ||||||||||||    
T  37200396 gaggaaaaccgaaaatgacctatattacag-gggtaaagacctattaaccc 37200347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 39094255 - 39094198
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||| ||||||||||| || ||||||||||||||| || |||| |||||||||||||    
T  39094255 ttacagggaggaaaaccggaactaacctatattacag-gggtaaagacctattaaccct 39094198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 3364525 - 3364476
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| | | || |||||| ||||||||||||||||||||||    
T  3364525 ttgttttgatttacctccctaataggccaaacaaaaacgaaaatttcttg 3364476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 16577208 - 16577257
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||  ||||||||||||||||||||||    
T  16577208 ttgttttgatttacccccctaataggtcaaacaaaaacgaaaatttcttg 16577257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 17328185 - 17328234
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| | || | |||||| ||||||||||||||||||||||    
T  17328185 ttgttttgatttacctctttaataggccaaacaaaaacgaaaatttcttg 17328234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 19641503 - 19641446
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    |||||| | ||||||||| |||| ||||||||||||| || |||| ||||||||||||    
T  19641503 ttacagggtggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 19641446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 19840096 - 19840039
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    |||||| | ||||||||| |||| ||||||||||||| || |||| ||||||||||||    
T  19840096 ttacagggtggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 19840039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 25077474 - 25077426
Alignment:
Q  311 gaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    ||||||||||||| |||||||||||||||| |||| | ||||||||||||    
T  25077474 gaaaaccgaaaatgacctatattacagagg-taaagatctattaacccta 25077426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 25926926 - 25926889
Alignment:
Q  320 aaataacctatattacagaggataaaaacctattaacc 357  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  25926926 aaatgacctatattacagaggataaagacctattaacc 25926889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 27010058 - 27010106
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  27010058 ttgttttgatttacccc-ctaataggccaaacaaaaacgaaaatttcttg 27010106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 29835292 - 29835247
Alignment:
Q  162 ttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    |||| ||||| ||| || ||||||||||||||||||||||||||||    
T  29835292 tttttatttacccccctaataggctaaacaaaaacgaaaatttctt 29835247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 32449884 - 32449836
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  32449884 ttgttttgatttacccc-ctaataggccaaacaaaaacgaaaatttcttg 32449836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 34635860 - 34635904
Alignment:
Q  217 taaatttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||    
T  34635860 taaaattggtttttgtttggcc-tattaggggggtaaatcaaaaca 34635904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 37147644 - 37147693
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||| ||||||    
T  37147644 ttgttttgatttacccccctaataggccaaacaaaaacgaaaaattcttg 37147693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 39227946 - 39227990
Alignment:
Q  217 taaatttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||| ||||||||||||||||| |||||| ||||||||||||||||    
T  39227946 taaaattggtttttgtttggcc-tattagaggagtaaatcaaaaca 39227990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 16577366 - 16577406
Alignment:
Q  320 aaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||||||||||||||| || |||| ||||||||||||||    
T  16577366 aaataacctatattacagggggtaaagacctattaacccta 16577406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 18555711 - 18555672
Alignment:
Q  222 ttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  18555711 ttggtttttgtttggcct-attaggggggtaaatcaaaaca 18555672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 18555826 - 18555866
Alignment:
Q  320 aaataacctatattacagaggataaaaacctattaacccta 360  Q
    ||||||| |||||||||| ||||||| ||||||||||||||    
T  18555826 aaataacatatattacaggggataaagacctattaacccta 18555866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 25926977 - 25927024
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||| ||| || |||||| |||||||||||||||||||||    
T  25926977 ttgttttgatttacccc-ctaataggccaaacaaaaacgaaaatttctt 25927024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 28484496 - 28484453
Alignment:
Q  218 aaatttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||||| ||||||||||||||| |||||||| |||||||||||||    
T  28484496 aaatttcgtttttgtttggcct-attaggggggtaaatcaaaaca 28484453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 33869452 - 33869499
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||| |||||||||||||||||||||| |||||  ||||||||||||    
T  33869452 aaaacctaaaataacctatattacagagg-taaaagtctattaacccta 33869499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 358
Target Start/End: Complemental strand, 37147599 - 37147551
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    ||||||||| |||| ||||||||||||| || |||| ||||||||||||    
T  37147599 ggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 37147551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 38386082 - 38386125
Alignment:
Q  218 aaatttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    ||||||||||||||||||||| ||||||||  |||||||||||||    
T  38386082 aaatttggtttttgtttggcc-tattagggaggtaaatcaaaaca 38386125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 43302041 - 43302084
Alignment:
Q  225 gtttttgtttggccttattaggggagtaaatcaaaacagattttt 269  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||    
T  43302041 gtttttgtttggcct-attaggggggtaaatcaaaacaaattttt 43302084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 356
Target Start/End: Original strand, 28883 - 28938
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaac 356  Q
    |||||| || |||||||||||||||||||||||||||| |||||| ||||||||||    
T  28883 ttacagagaagaaaaccgaaaataacctatattacagaagataaagacctattaac 28938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 27198238 - 27198338
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatcaa 258  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||         ||||||||||||||||||| | ||||||||| |||||||||    
T  27198238 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttcttgaaaaaaa--aaatttggtttttgtttgg-catattaggggggtaaatcaa 27198334  T
Q  259 aaca 262  Q
    ||||    
T  27198335 aaca 27198338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 14329600 - 14329658
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||| |||||||||||||||| ||||||||||||| || |||| |||||||||||||    
T  14329600 ttacagggaggaaaaccgaaaatgacctatattacagggggtaaagacctattaaccct 14329658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 43121274 - 43121173
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatcaa 258  Q
    ||||||||||||| ||| || |||||| ||||||||||||||| ||||||        |||| ||| |||||||||||||| ||||||||||||||||||    
T  43121274 ttgttttgatttaccccactaataggccaaacaaaaacgaaaaattcttgaaaaaaa-taaaattgatttttgtttggcct-attaggggagtaaatcaa 43121177  T
Q  259 aaca 262  Q
    ||||    
T  43121176 aaca 43121173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 359
Target Start/End: Complemental strand, 27198192 - 27198143
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||||||||    
T  27198192 ggaaaaccgaaaatgacctatattacaggggataaagacctattaaccct 27198143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 14329564 - 14329515
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  14329564 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttcttg 14329515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 25277567 - 25277616
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  25277567 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttcttg 25277616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 310 - 359
Target Start/End: Original strand, 29309783 - 29309832
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    ||||||||| |||| ||||||||||||| || ||||||||||||||||||    
T  29309783 ggaaaaccggaaatgacctatattacagggggtaaaaacctattaaccct 29309832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 38500477 - 38500428
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||| ||| |||||| |||||| ||||||||||||||||||||||    
T  38500477 ttgttttgaattacccctctaataggccaaacaaaaacgaaaatttcttg 38500428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 4482280 - 4482340
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattaca-gaggataaaaacctattaacccta 360  Q
    |||||| |||||||||||||||| || ||||||||| | || |||||||||||||||||||    
T  4482280 ttacagggaggaaaaccgaaaatgacttatattacagggggttaaaaacctattaacccta 4482340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 8388210 - 8388258
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||| |||||| |||||| ||||||||| |||||||||||    
T  8388210 ttgttttgatttacccctctaataggccaaacaaaaatgaaaatttctt 8388258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 17812044 - 17812092
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||||| | || |||||| |||||||||||||||||||||    
T  17812044 ttgttttgatttatcaccctaataggccaaacaaaaacgaaaatttctt 17812092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 357
Target Start/End: Original strand, 38500514 - 38500569
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaacc 357  Q
    |||||| |||||||||||||||| ||||||||||||| || |||| |||||||||||    
T  38500514 ttacagagaggaaaaccgaaaatgacctatattacag-gggtaaagacctattaacc 38500569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 41565366 - 41565414
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||| ||| || |||||| |||||||||||||||||||||    
T  41565366 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttctt 41565414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 359
Target Start/End: Original strand, 43121317 - 43121369
Alignment:
Q  308 gaggaaaaccgaaaataacctatattacaga-ggataaaaacctattaaccct 359  Q
    |||||||||| ||||||| |||||||||||| ||||||| |||||||||||||    
T  43121317 gaggaaaaccaaaaataatctatattacagagggataaagacctattaaccct 43121369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 364
Target Start/End: Complemental strand, 13572597 - 13572534
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccctagaat 364  Q
    |||||| | |||||||||||||| ||||||||||||| || |||||  ||||||||||| ||||    
T  13572597 ttacagggtggaaaaccgaaaatgacctatattacagggggtaaaacactattaacccttgaat 13572534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 360
Target Start/End: Complemental strand, 39451562 - 39451503
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||| |||||||||| ||||| || ||||||| || || |||||||||||||||||||    
T  39451562 ttacagggaggaaaaccaaaaatgacttatattagagggggtaaaaacctattaacccta 39451503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 357
Target Start/End: Original strand, 43400910 - 43400957
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaacc 357  Q
    |||||||||||||| |||||||||| ||||| |||| |||||||||||    
T  43400910 ggaaaaccgaaaatgacctatattagagagggtaaagacctattaacc 43400957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 308 - 358
Target Start/End: Original strand, 960504 - 960554
Alignment:
Q  308 gaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    ||||||||||| |||| ||||||||||||| || |||| ||||||||||||    
T  960504 gaggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 960554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 355
Target Start/End: Complemental strand, 8388171 - 8388117
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaa 355  Q
    |||||| ||||||||||| |||| ||||||||||||| || |||| |||||||||    
T  8388171 ttacagggaggaaaaccggaaattacctatattacagggggtaaagacctattaa 8388117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 360
Target Start/End: Complemental strand, 12317579 - 12317529
Alignment:
Q  311 gaaaaccgaaaataacctatattacagaggataaaaac-ctattaacccta 360  Q
    ||||||||||||||||||||||||||| ||  |||||| ||||||||||||    
T  12317579 gaaaaccgaaaataacctatattacaggggtgaaaaacactattaacccta 12317529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 311 - 369
Target Start/End: Original strand, 23389349 - 23389407
Alignment:
Q  311 gaaaaccgaaaataacctatattacagaggataaaaacctattaaccctagaatttata 369  Q
    ||||||||||||| ||||||||||||| || |||||  |||||||||||  ||||||||    
T  23389349 gaaaaccgaaaatgacctatattacagtgggtaaaacactattaaccctttaatttata 23389407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 27543486 - 27543587
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatcaa 258  Q
    ||||||||||||| ||| || |||||| ||||||||||||||| |||||          ||| ||||||||||||||||| ||||||||| |||||||||    
T  27543486 ttgttttgatttacccccctaataggccaaacaaaaacgaaaaattctt-aaaaaaaaaaaaattggtttttgtttggcc-tattaggggggtaaatcaa 27543583  T
Q  259 aaca 262  Q
    ||||    
T  27543584 aaca 27543587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 29309622 - 29309564
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||| | ||||||||| |||| ||||||||||||| || |||| |||||||||||||    
T  29309622 ttacaggggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccct 29309564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 359
Target Start/End: Original strand, 3912489 - 3912538
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||||||||||| ||||||||||||| || |||| || ||||||||||    
T  3912489 ggaaaaccgaaaatgacctatattacagggggtaaagacttattaaccct 3912538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 359
Target Start/End: Complemental strand, 4482093 - 4482044
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    ||||||||| |||| || |||||||||| || ||||||||||||||||||    
T  4482093 ggaaaaccggaaatgacatatattacagggggtaaaaacctattaaccct 4482044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 4482243 - 4482194
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || ||| || ||||||||||||||||||||||    
T  4482243 ttgttttgatttacccccctaataagccaaacaaaaacgaaaatttcttg 4482194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 7988987 - 7988942
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaattt 204  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||    
T  7988987 ttgttttgatttacccccctaataggccaaacaaaaacgaaaattt 7988942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 13567285 - 13567236
Alignment:
Q  312 aaaaccgaaaataacctatattaca-gaggataaaaacctattaacccta 360  Q
    |||||||||||| || ||||||||| | ||||||||||||||||||||||    
T  13567285 aaaaccgaaaatgacttatattacaaggggataaaaacctattaacccta 13567236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 519
Target Start/End: Original strand, 20540257 - 20540294
Alignment:
Q  482 cacattttgtggtcaagcatatggagcaaaacaatatc 519  Q
    |||||||||||||||||||||||||||| | |||||||    
T  20540257 cacattttgtggtcaagcatatggagcacaccaatatc 20540294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 359
Target Start/End: Original strand, 25277715 - 25277764
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    ||||||||| |||| ||||||||||||| || |||| |||||||||||||    
T  25277715 ggaaaaccggaaatgacctatattacagggggtaaagacctattaaccct 25277764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 25601852 - 25601808
Alignment:
Q  217 taaatttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||| |||||||||||||||||| |||||||| |||||||||||||    
T  25601852 taaaattggtttttgtttggcct-attaggggggtaaatcaaaaca 25601808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 359
Target Start/End: Complemental strand, 27987345 - 27987296
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||||||||||| |||||||||| || || |||| |||||||||||||    
T  27987345 ggaaaaccgaaaatgacctatattatagggggtaaagacctattaaccct 27987296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 359
Target Start/End: Complemental strand, 28044647 - 28044598
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||||||||||| |||||||||| || || |||| |||||||||||||    
T  28044647 ggaaaaccgaaaatgacctatattatagggggtaaagacctattaaccct 28044598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 42406269 - 42406224
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaacc 357  Q
    ||||||| |||||||||||||||||| ||||||| |||| ||||||    
T  42406269 aaaaccggaaataacctatattacaggggataaagacctgttaacc 42406224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 360
Target Start/End: Original strand, 2873772 - 2873824
Alignment:
Q  308 gaggaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||||||||||||| || |||||||||| || |||||  ||||||||||||    
T  2873772 gaggaaaaccgaaaatgacttatattacagggggtaaaacactattaacccta 2873824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 12330371 - 12330331
Alignment:
Q  320 aaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||||||||||||||| || |||| ||||||||||||||    
T  12330371 aaataacctatattacagggggtaaagacctattaacccta 12330331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 27637386 - 27637454
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaac-ctattaaccctagaatttat 368  Q
    |||||| | |||||||||||||| ||||||||||||| || | ||| | |||||||||||| |||||||    
T  27637386 ttacagggtggaaaaccgaaaatgacctatattacagggggttaaagcactattaaccctaaaatttat 27637454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 356
Target Start/End: Complemental strand, 35773194 - 35773150
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaac 356  Q
    |||||||||||| |||||||||||||||| |||||  ||||||||    
T  35773194 aaaaccgaaaatgacctatattacagagggtaaaacactattaac 35773150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 208
Target Start/End: Original strand, 40770640 - 40770668
Alignment:
Q  180 ataggctaaacaaaaacgaaaatttcttg 208  Q
    |||||||||||||||||||||||||||||    
T  40770640 ataggctaaacaaaaacgaaaatttcttg 40770668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 360
Target Start/End: Complemental strand, 39868525 - 39868466
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||||||  |||||||||||||||||||||||||| || ||||||||||||| |||||    
T  39868525 ttacagtgaaaaaaaccgaaaataacctatattacagggggtaaaaacctattatcccta 39868466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 14574926 - 14574984
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattaca-gaggataaaaacctattaaccc 358  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  14574926 ttacagggaggaaaaccgaaaataacctatattacaggaggataaaacactattaaccc 14574984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 359
Target Start/End: Complemental strand, 22272978 - 22272929
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  22272978 ggaaaaccgaaaatgacctatattacagggggtaaaaacctattaaccct 22272929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 310 - 359
Target Start/End: Complemental strand, 21780170 - 21780121
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||||||||||| ||||||||||||| || |||| |||||||||||||    
T  21780170 ggaaaaccgaaaatgacctatattacagggggtaaagacctattaaccct 21780121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 45900749 - 45900701
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||| ||| || |||||| |||||||||||||||||||||    
T  45900749 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttctt 45900701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 19875935 - 19875838
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatcaa 258  Q
    ||||||||||||| ||| || |||||| |||||||||||||||||| |||         ||| |||||||||||||||||| |||||||| |||||||||    
T  19875935 ttgttttgatttacccc-ctaataggccaaacaaaaacgaaaattttttgaaaaa----aaaattggtttttgtttggcct-attaggggtgtaaatcaa 19875842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 6595268 - 6595302
Alignment:
Q  325 acctatattacagaggataaaaacctattaaccct 359  Q
    |||||||||||||||| ||||||||||||||||||    
T  6595268 acctatattacagagggtaaaaacctattaaccct 6595302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 7272324 - 7272266
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattac-agaggataaaaacctattaaccc 358  Q
    |||||| | |||||||||||||||||||||||||| || || |||| ||||||||||||    
T  7272324 ttacaggggggaaaaccgaaaataacctatattacaagggggtaaagacctattaaccc 7272266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 46094251 - 46094297
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    ||||||| |||| |||||||||||||||| |||| ||||||||||||    
T  46094251 aaaaccggaaatgacctatattacagagggtaaagacctattaaccc 46094297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 50138534 - 50138488
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    |||||||||||| ||||||||||||| || |||| ||||||||||||    
T  50138534 aaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 50138488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 5401856 - 5401905
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||| ||||||    
T  5401856 ttgttttgatttacccccctaataggccaaacaaaaacgaaaaattcttg 5401905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 9001483 - 9001442
Alignment:
Q  319 aaaataacctatattacagaggataaaaacctattaacccta 360  Q
    ||||||| ||||||||||| || |||||||||||||||||||    
T  9001483 aaaataatctatattacagggggtaaaaacctattaacccta 9001442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 16482251 - 16482202
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| |||  | ||||| |||||||||||||||||||||||    
T  16482251 ttgttttgatttacccccataataggttaaacaaaaacgaaaatttcttg 16482202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 17289895 - 17289939
Alignment:
Q  217 taaatttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||    
T  17289895 taaaattggtttttgtttggcc-tattaggggcgtaaatcaaaaca 17289939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 18454287 - 18454332
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaattt 204  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||    
T  18454287 ttgttttgatttacccccctaataggccaaacaaaaacgaaaattt 18454332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 21798577 - 21798622
Alignment:
Q  313 aaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    |||| |||||| ||||||||||||| ||||||| ||||||||||||    
T  21798577 aaactgaaaatgacctatattacaggggataaagacctattaaccc 21798622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 27579707 - 27579659
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  27579707 ttgttttgatttacccc-ctaataggccaaacaaaaacgaaaatttcttg 27579659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 359
Target Start/End: Complemental strand, 35539652 - 35539603
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||||| ||||| ||||||||||||| ||||||| ||||||| |||||    
T  35539652 ggaaaaccaaaaatgacctatattacaggggataaagacctattgaccct 35539603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 43751139 - 43751187
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| |||| | |||||| ||||||||||||||||||||||    
T  43751139 ttgttttgatttacccct-taataggccaaacaaaaacgaaaatttcttg 43751187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 50727694 - 50727645
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| ||  ||||| ||||||||||||||||||||||    
T  50727694 ttgttttgatttaaccccctattaggccaaacaaaaacgaaaatttcttg 50727645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 50735708 - 50735659
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| ||  ||||| ||||||||||||||||||||||    
T  50735708 ttgttttgatttaaccccctattaggccaaacaaaaacgaaaatttcttg 50735659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 55363886 - 55363841
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaattt 204  Q
    |||||||||||||  ||||| |||||| ||||||||||||||||||    
T  55363886 ttgttttgatttacacctctaataggccaaacaaaaacgaaaattt 55363841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 56467507 - 56467555
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  56467507 ttgttttgatttacccc-ctaataggccaaacaaaaacgaaaatttcttg 56467555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 469 - 517
Target Start/End: Complemental strand, 15158642 - 15158594
Alignment:
Q  469 caagtgcactagacacattttgtggtcaagcatatggagcaaaacaata 517  Q
    |||||||| | || ||| ||||||| |||||||||||||||||||||||    
T  15158642 caagtgcattggaaacactttgtggacaagcatatggagcaaaacaata 15158594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 18320595 - 18320556
Alignment:
Q  222 ttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  18320595 ttggtttttgtttggcct-attaggagagtaaatcaaaaca 18320556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 26799980 - 26799932
Alignment:
Q  311 gaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    ||||| ||||||| | |||||||||||||||||||||  ||||||||||    
T  26799980 gaaaatcgaaaatgatctatattacagaggataaaaatttattaaccct 26799932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 336
Target Start/End: Complemental strand, 32682226 - 32682198
Alignment:
Q  308 gaggaaaaccgaaaataacctatattaca 336  Q
    |||||||||||||||||||||||||||||    
T  32682226 gaggaaaaccgaaaataacctatattaca 32682198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 35539791 - 35539839
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    ||||||| |||| ||||||||||||| || |||| ||||||||||||||    
T  35539791 aaaaccggaaatgacctatattacagggggtaaatacctattaacccta 35539839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 40479527 - 40479575
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||| ||| || |||||||||||||||||||  ||||||||||||||    
T  40479527 aaaaccaaaagtaccctatattacagaggataatgacctattaacccta 40479575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 50727628 - 50727588
Alignment:
Q  320 aaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||| ||||||||||||| || |||||||||||||||||||    
T  50727628 aaatgacctatattacagggggtaaaaacctattaacccta 50727588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 50735642 - 50735602
Alignment:
Q  320 aaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||| ||||||||||||| || |||||||||||||||||||    
T  50735642 aaatgacctatattacagggggtaaaaacctattaacccta 50735602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 53231867 - 53231915
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||| ||||| ||| || |||||||||||||||||||||| |||||    
T  53231867 ttgttttcatttacccccctaataggctaaacaaaaacgaaaagttctt 53231915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 301 - 358
Target Start/End: Complemental strand, 242449 - 242391
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattaca-gaggataaaaacctattaaccc 358  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  242449 ttacagggaggaaaaccgaaaataacctatattacaggaggataaaacactattaaccc 242391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 20040994 - 20041096
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatcaa 258  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||        |||| || |||||||||||||| ||||||||| ||||| |||    
T  20040994 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttcttgaaaaaaaataaaattagtttttgtttggcc-tattaggggggtaaaacaa 20041092  T
Q  259 aaca 262  Q
    ||||    
T  20041093 aaca 20041096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 260
Target Start/End: Original strand, 19272311 - 19272411
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatcaa 258  Q
    ||||||| ||||| ||| || |||||| ||||||||||||||||||||||         ||| ||||||||||||||||| ||||||||| |||||||||    
T  19272311 ttgttttaatttacccccctaataggccaaacaaaaacgaaaatttcttgaaaaaaaaaaaaattggtttttgtttggcc-tattaggggggtaaatcaa 19272409  T
Q  259 aa 260  Q
    ||    
T  19272410 aa 19272411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 48945230 - 48945183
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||| ||||| |||||||||||||||| ||||||||||||||||||    
T  48945230 aaaaccaaaaatgacctatattacagagggtaaaaacctattaaccct 48945183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 31186762 - 31186811
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  31186762 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttcttg 31186811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 31186714 - 31186666
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||| ||||||| |||||||||||||||| |||| ||||||||||||||    
T  31186714 aaaatcgaaaatgacctatattacagagggtaaagacctattaacccta 31186666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 9915697 - 9915650
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    ||||| |||||||||||||||||||| || |||| |||||||||||||    
T  9915697 aaaactgaaaataacctatattacagggggtaaagacctattaaccct 9915650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 9923609 - 9923562
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    ||||| |||||||||||||||||||| || |||| |||||||||||||    
T  9923609 aaaactgaaaataacctatattacagggggtaaagacctattaaccct 9923562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 26050221 - 26050170
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccctagaa 363  Q
    |||||||||||| |||||||||| || || |||| |||||||||||||||||    
T  26050221 aaaaccgaaaatgacctatattagagggggtaaagacctattaaccctagaa 26050170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 26050266 - 26050368
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg-nnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatca 257  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||         |||| ||||||||||||||||| ||||||||| |||| |||    
T  26050266 ttgttttgatttacccc-ctaataggcaaaacaaaaacgaaaatttcttgaaaaaaaaataaaattggtttttgtttggcc-tattaggggggtaattca 26050363  T
Q  258 aaaca 262  Q
    |||||    
T  26050364 aaaca 26050368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 26059580 - 26059529
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccctagaa 363  Q
    |||||||||||| |||||||||| || || |||| |||||||||||||||||    
T  26059580 aaaaccgaaaatgacctatattagagggggtaaagacctattaaccctagaa 26059529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 26059625 - 26059727
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg-nnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatca 257  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||         |||| ||||||||||||||||| ||||||||| |||| |||    
T  26059625 ttgttttgatttacccc-ctaataggcaaaacaaaaacgaaaatttcttgaaaaaaaaataaaattggtttttgtttggcc-tattaggggggtaattca 26059722  T
Q  258 aaaca 262  Q
    |||||    
T  26059723 aaaca 26059727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 13279428 - 13279474
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    |||||||||||| ||||||||||||| || |||| ||||||||||||    
T  13279428 aaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 13279474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 360
Target Start/End: Complemental strand, 24845686 - 24845636
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||||||||||| |||||||||||||  | |||| ||||||||||||||    
T  24845686 ggaaaaccgaaaatgacctatattacaggaggtaaagacctattaacccta 24845636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 460 - 518
Target Start/End: Original strand, 33993218 - 33993276
Alignment:
Q  460 tgggtgtgtcaagtgcactagacacattttgtggtcaagcatatggagcaaaacaatat 518  Q
    ||||| || |||||||| |||| ||| | ||||| ||||||||||||||||||||||||    
T  33993218 tgggtatggcaagtgcattagaaacactatgtggacaagcatatggagcaaaacaatat 33993276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 358
Target Start/End: Complemental strand, 35158229 - 35158183
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    |||||||||||| ||||||||||||| ||||||||  ||||||||||    
T  35158229 aaaaccgaaaatgacctatattacaggggataaaacactattaaccc 35158183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 308 - 358
Target Start/End: Original strand, 39580173 - 39580223
Alignment:
Q  308 gaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    ||||||||||| |||| ||||||||||||| || |||| ||||||||||||    
T  39580173 gaggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 39580223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 3307541 - 3307586
Alignment:
Q  162 ttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    |||| ||||| |||||| |||||| |||||||||||||||||||||    
T  3307541 tttttatttacccctctaataggccaaacaaaaacgaaaatttctt 3307586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 359
Target Start/End: Complemental strand, 6269576 - 6269527
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    ||||||| |||||| ||||||||||||| || |||| |||||||||||||    
T  6269576 ggaaaactgaaaatgacctatattacagggggtaaagacctattaaccct 6269527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 359
Target Start/End: Original strand, 19272458 - 19272507
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||||| ||||| ||||||||||||| || |||| |||||||||||||    
T  19272458 ggaaaaccaaaaatgacctatattacagggggtaaagacctattaaccct 19272507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 23371644 - 23371596
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  23371644 ttgttttgatttacccc-ctaataggccaaacaaaaacgaaaatttcttg 23371596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 359
Target Start/End: Original strand, 34258432 - 34258481
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||||||||||||||| |||||| ||||| |||||  |||||||||||    
T  34258432 ggaaaaccgaaaataacccatattatagagggtaaaacactattaaccct 34258481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 43251603 - 43251651
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| |||| | |||||| ||||||||||||||||||||||    
T  43251603 ttgttttgatttacccct-taataggccaaacaaaaacgaaaatttcttg 43251651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 44569088 - 44569137
Alignment:
Q  311 gaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    ||||| ||||||| |||| |||||||| ||||||| ||||||||||||||    
T  44569088 gaaaatcgaaaatgacctgtattacaggggataaagacctattaacccta 44569137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 45164006 - 45164055
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| |||||||||||||||| |||||    
T  45164006 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatatcttg 45164055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 10980615 - 10980655
Alignment:
Q  320 aaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||| |||||||||||||||| |||| ||||||||||||||    
T  10980615 aaatgacctatattacagagggtaaagacctattaacccta 10980655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 16902197 - 16902244
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||| ||| || |||||| |||||||||||||||||||||    
T  16902197 ttgttttgatttacccc-cttataggccaaacaaaaacgaaaatttctt 16902244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 20041135 - 20041195
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattaca-gaggataaaaacctattaacccta 360  Q
    |||||| | ||||||||| |||| |||||||||||| | || |||||||||||||||||||    
T  20041135 ttacagggtggaaaaccggaaatgacctatattacaggggggtaaaaacctattaacccta 20041195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 21298255 - 21298303
Alignment:
Q  311 gaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    ||||||| ||||| ||||||||||||  ||||||| |||||||||||||    
T  21298255 gaaaaccaaaaatgacctatattacaagggataaagacctattaaccct 21298303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 24205275 - 24205314
Alignment:
Q  222 ttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  24205275 ttggtttttgtttggcct-attaggggggtaaatcaaaaca 24205314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 24206793 - 24206832
Alignment:
Q  222 ttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  24206793 ttggtttttgtttggcct-attaggggggtaaatcaaaaca 24206832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 24555920 - 24555960
Alignment:
Q  320 aaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||| ||||||||||||| || |||||||||||||||||||    
T  24555920 aaatgacctatattacagggggtaaaaacctattaacccta 24555960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 29141168 - 29141216
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||| ||||||| ||||||||||||| ||||||| ||||||||| ||||    
T  29141168 aaaatcgaaaatgacctatattacaggggataaagacctattaatccta 29141216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 34731680 - 34731640
Alignment:
Q  316 ccgaaaataacctatattacagaggataaaaacctattaac 356  Q
    |||||||| |||||||||| || ||||||||||||||||||    
T  34731680 ccgaaaatgacctatattataggggataaaaacctattaac 34731640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 358
Target Start/End: Original strand, 48104737 - 48104785
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    |||||||||||||| |||||||||||||  | |||| ||||||||||||    
T  48104737 ggaaaaccgaaaatgacctatattacaggaggtaaagacctattaaccc 48104785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 301 - 363
Target Start/End: Original strand, 12399586 - 12399648
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccctagaa 363  Q
    |||||| | |||||||||||||||||||||||||||| || |||| |||||||||||| ||||    
T  12399586 ttacaggggggaaaaccgaaaataacctatattacagggggtaaagacctattaacccaagaa 12399648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 711332 - 711380
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||||||    
T  711332 ttgttttgatttacccctctaataggccaaacaaaaacgaaaatttctt 711380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 5718424 - 5718321
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnc-taaatttggtttttgtttggccttattaggggagtaaatca 257  Q
    ||||||||||||| |||  | |||||| ||||||||||||||||||||||         |||| |||||||||||||||||| |||||||| ||||||||    
T  5718424 ttgttttgatttacccccttaataggccaaacaaaaacgaaaatttcttgaaaaaaaaataaaattggtttttgtttggcct-attaggggggtaaatca 5718326  T
Q  258 aaaca 262  Q
    |||||    
T  5718325 aaaca 5718321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 308 - 359
Target Start/End: Original strand, 35798690 - 35798741
Alignment:
Q  308 gaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||| |||||||    
T  35798690 gaggaaaaccgaaaatgacctatattacaggggataaagacctactaaccct 35798741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 5747411 - 5747460
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| |||||| |||||| ||||||||| ||||||||||||    
T  5747411 ttgttttgatttacccctctaataggccaaacaaaaatgaaaatttcttg 5747460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 310 - 367
Target Start/End: Original strand, 10976756 - 10976813
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccctagaattta 367  Q
    ||||||||| |||| ||||||||||||| || |||| |||||||||||||| ||||||    
T  10976756 ggaaaaccggaaatgacctatattacagggggtaaagacctattaaccctataattta 10976813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 20688888 - 20688937
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  20688888 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttcttg 20688937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 31861584 - 31861633
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  31861584 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttcttg 31861633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 37204990 - 37205039
Alignment:
Q  311 gaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    ||||||||||||| |||||||||||||||| |||| || |||||||||||    
T  37204990 gaaaaccgaaaatgacctatattacagagggtaaagacatattaacccta 37205039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 39153543 - 39153587
Alignment:
Q  217 taaatttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||    
T  39153543 taaaattggtttttgtttggcct-attaggggagtaaatcaaaaca 39153587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 361
Target Start/End: Complemental strand, 23188677 - 23188626
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccctag 361  Q
    ||||||||||||||||||||||||||||  | |||||  |||||||||||||    
T  23188677 ggaaaaccgaaaataacctatattacaggaggtaaaacactattaaccctag 23188626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 31861537 - 31861490
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    ||||||| |||| ||||||||||||| ||||||| |||||||||||||    
T  31861537 aaaaccggaaatgacctatattacaggggataaagacctattaaccct 31861490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 10012817 - 10012863
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    |||||| ||| || |||||||||||||||||||| ||||||||||||    
T  10012817 aaaaccaaaagtaccctatattacagaggataaagacctattaaccc 10012863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 21148891 - 21148941
Alignment:
Q  159 ttgttttgatttatccctctga-taggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||||||| || | ||||| ||||||||||||||||||||||    
T  21148891 ttgttttgatttatcccccttaataggccaaacaaaaacgaaaatttcttg 21148941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 24098526 - 24098573
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||||||||   |||||| ||||||||||||||||||||||    
T  24098526 ttgttttgatttatcccta--ataggccaaacaaaaacgaaaatttcttg 24098573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 361
Target Start/End: Original strand, 29321318 - 29321368
Alignment:
Q  312 aaaaccgaaaataacctatattaca-gaggataaaaacctattaaccctag 361  Q
    |||||| ||||| |||||||||||| ||||||||| |||||||||||||||    
T  29321318 aaaaccaaaaatgacctatattacatgaggataaagacctattaaccctag 29321368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 312 - 358
Target Start/End: Original strand, 36992994 - 36993040
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    ||||||| |||| |||||||||||||||| |||| ||||||||||||    
T  36992994 aaaaccggaaatgacctatattacagagggtaaagacctattaaccc 36993040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 518
Target Start/End: Original strand, 14092173 - 14092222
Alignment:
Q  469 caagtgcactagacacattttgtggtcaagcatatggagcaaaacaatat 518  Q
    |||||||| |||| || || ||||| ||||||||||||||||||||||||    
T  14092173 caagtgcattagaaactttatgtggacaagcatatggagcaaaacaatat 14092222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 16504916 - 16504868
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || ||||||||||||||||| |||||||||||    
T  16504916 ttgttttgatttacccc-ctaataggctaaacaaaaacaaaaatttcttg 16504868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 20698484 - 20698436
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||    
T  20698484 ttgttttgatttagccc-ctaataggccaaacaaaaacgaaaatttcttg 20698436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 21149027 - 21149063
Alignment:
Q  225 gtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  21149027 gtttttgtttggcct-attaggggagtaaatcaaaaca 21149063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 22551712 - 22551664
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| |||  | |||||||||||||||||||||||||||||    
T  22551712 ttgttttgatttacccca-taataggctaaacaaaaacgaaaatttcttg 22551664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 26034986 - 26034942
Alignment:
Q  217 taaatttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||| |||||||||||||||||| |||||||| |||||||||||||    
T  26034986 taaaattggtttttgtttggcct-attaggggggtaaatcaaaaca 26034942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 29754144 - 29754189
Alignment:
Q  162 ttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    |||||||||| ||| || |||||| |||||||||||||||||||||    
T  29754144 ttttgatttacccccctaataggccaaacaaaaacgaaaatttctt 29754189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 2870743 - 2870791
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||| ||| || |||||| ||| |||||||||||||||||    
T  2870743 ttgttttgatttaaccccctaataggccaaataaaaacgaaaatttctt 2870791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 2870809 - 2870848
Alignment:
Q  222 ttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  2870809 ttggtttttgtttggcct-attaggggggtaaatcaaaaca 2870848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 16304971 - 16305011
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaa 199  Q
    ||||||||||||| ||| || ||||||||||||||||||||    
T  16304971 ttgttttgatttacccccctaataggctaaacaaaaacgaa 16305011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 337
Target Start/End: Original strand, 16504946 - 16504982
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacag 337  Q
    |||||||| |||||||||||||| |||||||||||||    
T  16504946 ttacagtggggaaaaccgaaaatgacctatattacag 16504982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 208
Target Start/End: Complemental strand, 20076832 - 20076804
Alignment:
Q  180 ataggctaaacaaaaacgaaaatttcttg 208  Q
    |||||||||||||||||||||||||||||    
T  20076832 ataggctaaacaaaaacgaaaatttcttg 20076804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 340
Target Start/End: Complemental strand, 23159514 - 23159486
Alignment:
Q  312 aaaaccgaaaataacctatattacagagg 340  Q
    |||||||||||||||||||||||||||||    
T  23159514 aaaaccgaaaataacctatattacagagg 23159486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 29104491 - 29104443
Alignment:
Q  311 gaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||| |||||| ||||||||||||| || |||| |||||||||||||    
T  29104491 gaaaactgaaaatgacctatattacagggggtaaagacctattaaccct 29104443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 336
Target Start/End: Complemental strand, 31567684 - 31567656
Alignment:
Q  308 gaggaaaaccgaaaataacctatattaca 336  Q
    |||||||||||||||||||||||||||||    
T  31567684 gaggaaaaccgaaaataacctatattaca 31567656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 33658965 - 33659013
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||| ||| || |||||| ||||||||||||||| |||||    
T  33658965 ttgttttgatttacccccctaataggccaaacaaaaacgaaaaattctt 33659013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 39153481 - 39153521
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaa 199  Q
    ||||||||||||||||| || |||||| |||||||||||||    
T  39153481 ttgttttgatttatccccctaataggccaaacaaaaacgaa 39153521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 3739 - 3788
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  3739 ttgttttgatttacccctctaataggccaaacaaaaacgaaaatttcttg 3788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 158232 - 158183
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  158232 ttgttttgatttacccctctaataggccaaacaaaaacgaaaatttcttg 158183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 5330513 - 5330617
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnctaaat--ttggtttttgtttggccttattaggggagtaaatc 256  Q
    ||||||||||||||||| || |||||| |||||||||||||||||| |||         ||||  ||||||||||||||||| ||||||||| |||||||    
T  5330513 ttgttttgatttatccccctaataggccaaacaaaaacgaaaattttttgaaaaaaaaaaaataattggtttttgtttggcc-tattaggggggtaaatc 5330611  T
Q  257 aaaaca 262  Q
    ||||||    
T  5330612 aaaaca 5330617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 7112587 - 7112635
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||||||| || |||||| |||||||||||||||||||||    
T  7112587 ttgttttgatttatccccctaataggccaaacaaaaacgaaaatttctt 7112635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 13509354 - 13509251
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg-nnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatca 257  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||         |||| ||||||||||||||| |||||||| || ||||||||    
T  13509354 ttgttttgatttaccccgctaataggccaaacaaaaacgaaaatttcttgaaaaaaaattaaaattggtttttgtttgg-cttattagaggggtaaatca 13509256  T
Q  258 aaaca 262  Q
    |||||    
T  13509255 aaaca 13509251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 14909818 - 14909760
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||   |||||||||||    
T  14909818 ttacagggaggaaaaccgaaaattacctatattacagagggtaaagcactattaaccct 14909760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 24963003 - 24963061
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    |||||| |||||||| | ||||||||||||||||||| || ||||| ||||||||||||    
T  24963003 ttacagggaggaaaatcaaaaataacctatattacagggggtaaaagcctattaaccct 24963061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 283
Target Start/End: Complemental strand, 42847711 - 42847586
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg--nnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatc 256  Q
    ||||||||||||| ||| || |||||| ||||||||||||||||||||||          || ||||||||||||||||||| ||||||||  |||||||    
T  42847711 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttcttgaaaaaaaaaatatatttggtttttgtttggcc-tattagggaggtaaatc 42847613  T
Q  257 aaaacagatttttgttaaagggggtaa 283  Q
    ||||||  ||||| ||  |||||||||    
T  42847612 aaaacaattttttttttcagggggtaa 42847586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 280
Target Start/End: Complemental strand, 13545774 - 13545653
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt-gnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatca 257  Q
    ||||||||||||| ||| || |||||| |||||||||||||||||||||          |||| ||||||||||||||| |||||||| || ||||||||    
T  13545774 ttgttttgatttaccccgctaataggccaaacaaaaacgaaaatttcttaaaaaaaaattaaaattggtttttgtttgg-cttattagaggggtaaatca 13545676  T
Q  258 aaacagatttttgttaaaggggg 280  Q
    |||||  ||||| ||| ||||||    
T  13545675 aaacaatttttttttacaggggg 13545653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 5348228 - 5348332
Alignment:
Q  159 ttgttttgatttatccctctga-taggctaaacaaaaacgaaaatttcttgnnnnnnncta-aatttggtttttgtttggccttattaggggagtaaatc 256  Q
    ||||||||||||||||| || | ||||| ||||||||||||||||||||||         | || ||||||||||||||||| ||||||||| |||||||    
T  5348228 ttgttttgatttatcccccttaataggccaaacaaaaacgaaaatttcttgaaaaaaaaaataaattggtttttgtttggcc-tattaggggggtaaatc 5348326  T
Q  257 aaaaca 262  Q
    ||||||    
T  5348327 aaaaca 5348332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 366
Target Start/End: Original strand, 9439411 - 9439467
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccctagaattt 366  Q
    ||||||||| || ||||||||||||||| || |||| |||||||||||||| |||||    
T  9439411 ggaaaaccggaattaacctatattacagggggtaaagacctattaaccctataattt 9439467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 15336546 - 15336486
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccctag 361  Q
    |||||| | |||||||||||||||||||||||||||| || | |||  |||||||||||||    
T  15336546 ttacagggtggaaaaccgaaaataacctatattacagggggtgaaagactattaaccctag 15336486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 28410960 - 28410912
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||| ||||||| ||||||||||||| ||||||| ||||||||||||||    
T  28410960 aaaatcgaaaatgacctatattacaggggataaagacctattaacccta 28410912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 28724493 - 28724445
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||| ||| || |||||| |||||||||||||||||||||    
T  28724493 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatttctt 28724445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 29018560 - 29018512
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||| |||||| |||| | |||||||||||||||||||||    
T  29018560 ttgttttgatttacccctctaatagaccaaacaaaaacgaaaatttctt 29018512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 358
Target Start/End: Original strand, 42736830 - 42736878
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    ||||||||| |||| ||||||||||||| ||||||| ||||||||||||    
T  42736830 ggaaaaccggaaatgacctatattacaggggataaagacctattaaccc 42736878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 357
Target Start/End: Original strand, 2472593 - 2472640
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaacc 357  Q
    |||||| ||||||||||||||||||||| || |||| |||||||||||    
T  2472593 ggaaaatcgaaaataacctatattacagggggtaaagacctattaacc 2472640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 358
Target Start/End: Complemental strand, 5330467 - 5330420
Alignment:
Q  311 gaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    |||||| |||||| |||||||||||| ||| |||||||||||||||||    
T  5330467 gaaaactgaaaatgacctatattacatagggtaaaaacctattaaccc 5330420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 359
Target Start/End: Original strand, 18458809 - 18458860
Alignment:
Q  308 gaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccct 359  Q
    ||||||||||| |||| ||||||||||||| || |||| |||||||||||||    
T  18458809 gaggaaaaccggaaatgacctatattacagggggtaaagacctattaaccct 18458860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 358
Target Start/End: Original strand, 35034305 - 35034352
Alignment:
Q  311 gaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    |||||||| |||| ||||||||||||| ||||||| ||||||||||||    
T  35034305 gaaaaccggaaatgacctatattacaggggataaagacctattaaccc 35034352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 13545737 - 13545794
Alignment:
Q  225 gtttttgtttggccttattaggggagtaaatcaaaacagatttttgttaaagggggtaa 283  Q
    ||||||||||||||| ||||| || ||||||||||||| | |||| |||||||||||||    
T  13545737 gtttttgtttggcct-attagcggggtaaatcaaaacaaactttttttaaagggggtaa 13545794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 41190158 - 41190208
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||| |||||||||| ||||||||||||| |||||  ||||||||||||    
T  41190158 ggaaaatcgaaaataacatatattacagagggtaaaatactattaacccta 41190208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 18458768 - 18458719
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| ||||||||||||||| ||||||    
T  18458768 ttgttttgatttacccccctaataggccaaacaaaaacgaaaaattcttg 18458719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 22604673 - 22604730
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaaccctagaatttata 369  Q
    ||||||| |||| ||||||||||||| || |||| |||||||||||||| | ||||||    
T  22604673 aaaaccggaaatgacctatattacaggggttaaagacctattaaccctaaattttata 22604730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 33573797 - 33573841
Alignment:
Q  217 taaatttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||    
T  33573797 taaaattggtttttgtttggcc-tattaggggggtaaatcaaaaca 33573841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 40498221 - 40498172
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    |||||||||||||||||| | |||||  | ||||||||||||||||||||    
T  40498221 ttgttttgatttatccctttaatagggcagacaaaaacgaaaatttcttg 40498172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 42736727 - 42736683
Alignment:
Q  217 taaatttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||| |||||||||||||||||| |||||| |||||||||||||||    
T  42736727 taaaattggtttttgtttggcct-attaggagagtaaatcaaaaca 42736683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 4646891 - 4646852
Alignment:
Q  222 ttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  4646891 ttggtttttgtttggcct-attaggggggtaaatcaaaaca 4646852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 15336867 - 15336907
Alignment:
Q  315 accgaaaataacctatattacagaggataaaaacctattaa 355  Q
    ||||| ||| ||||||||||||||||||||| |||||||||    
T  15336867 accgagaatgacctatattacagaggataaagacctattaa 15336907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 360
Target Start/End: Complemental strand, 24987654 - 24987606
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    ||||||| |||| ||||||||||||| || |||| ||||||||||||||    
T  24987654 aaaaccggaaatgacctatattacagggggtaaagacctattaacccta 24987606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 358
Target Start/End: Original strand, 26743048 - 26743096
Alignment:
Q  311 gaaaaccgaaaataacctatattacagaggataaaaac-ctattaaccc 358  Q
    ||||||||||||| ||||||||||||||||  |||||| ||||||||||    
T  26743048 gaaaaccgaaaatgacctatattacagaggtgaaaaacactattaaccc 26743096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 32131914 - 32131962
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||||||| | ||||||||||||| || |||| ||||||||||||||    
T  32131914 aaaaccgaaagtgacctatattacagggggtaaagacctattaacccta 32131962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 38700 - 38802
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatcaa 258  Q
    ||||||||||||| ||| || |||||| |||||||||| |||||||||||        |||| ||||||||||||||| |||||| | || |||||||||    
T  38700 ttgttttgatttaccccgctaataggccaaacaaaaacaaaaatttcttgaaaaaaattaaaattggtttttgtttgg-cttattcgaggggtaaatcaa 38798  T
Q  259 aaca 262  Q
    ||||    
T  38799 aaca 38802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 358
Target Start/End: Complemental strand, 38660 - 38612
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    ||||||||| |||| ||||||||||||||||||||| | || |||||||    
T  38660 ggaaaaccggaaatgacctatattacagaggataaatatctgttaaccc 38612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 26542 - 26592
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||||||||||| |||||||||||| ||| |||| ||||||||||||||    
T  26542 ggaaaaccgaaaatgacctatattacaaagggtaaacacctattaacccta 26592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 358
Target Start/End: Complemental strand, 26356 - 26308
Alignment:
Q  310 ggaaaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    |||||||||||||| ||||||||||||| || |||| ||||||||||||    
T  26356 ggaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 26308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 26400 - 26498
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttgnnnnnnnctaaatttggtttttgtttggccttattaggggagtaaatcaa 258  Q
    ||||||||| ||| ||| || |||||| ||||||||||||||||||||||         ||| |||||||||||||||||| |||||||| |||||||||    
T  26400 ttgttttgaattacccc-ctaataggccaaacaaaaacgaaaatttcttgaaaaaa---aaaattggtttttgtttggcct-attaggggggtaaatcaa 26494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 38142 - 38190
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  38142 ttgttttgatttacccc-ctaataggctaaacaaaaacgaaaatttcttg 38190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 369
Target Start/End: Original strand, 4151 - 4219
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaaccctagaatttata 369  Q
    |||||| | ||||||||| |||| ||||||||||||| || |||| |||||||||||||| ||| ||||    
T  4151 ttacaggggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccctaaaatctata 4219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 4054 - 4010
Alignment:
Q  217 taaatttggtttttgtttggccttattaggggagtaaatcaaaaca 262  Q
    |||| |||||||||||||||||| |||||||| |||||||||||||    
T  4054 taaaattggtttttgtttggcct-attaggggggtaaatcaaaaca 4010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 71709 - 71665
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaa 345  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||    
T  71709 ttacagggaggaaaaccgaaaataacatatattacaggggataaa 71665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 636 - 695
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||| | ||||||||  |||| |||||||||||||||| |||| ||||||||||||||    
T  636 ttacaggggggaaaaccataaatgacctatattacagagggtaaagacctattaacccta 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 360
Target Start/End: Complemental strand, 10412 - 10353
Alignment:
Q  301 ttacagtgaggaaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||| |||||||||| ||||| || ||||||| || || |||||||||||||||||||    
T  10412 ttacagggaggaaaaccaaaaatgacttatattagagggggtaaaaacctattaacccta 10353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 874 - 837
Alignment:
Q  320 aaataacctatattacagaggataaaaacctattaacc 357  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  874 aaatgacctatattacagaggataaagacctattaacc 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 925 - 972
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttctt 207  Q
    ||||||||||||| ||| || |||||| |||||||||||||||||||||    
T  925 ttgttttgatttacccc-ctaataggccaaacaaaaacgaaaatttctt 972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 8059 - 8010
Alignment:
Q  159 ttgttttgatttatccctctgataggctaaacaaaaacgaaaatttcttg 208  Q
    ||||||||||||| ||| || |||||| |||||||||||||||| |||||    
T  8059 ttgttttgatttacccccctaataggccaaacaaaaacgaaaatctcttg 8010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 4439 - 4484
Alignment:
Q  313 aaaccgaaaataacctatattacagaggataaaaacctattaaccc 358  Q
    ||||||||||| ||||||||||||| || |||| ||||||||||||    
T  4439 aaaccgaaaatgacctatattacagggggtaaagacctattaaccc 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 368
Target Start/End: Complemental strand, 15902 - 15862
Alignment:
Q  328 tatattacagaggataaaaacctattaaccctagaatttat 368  Q
    |||||||||| ||||||| ||||||||||||||| ||||||    
T  15902 tatattacaggggataaagacctattaaccctagtatttat 15862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 17466 - 17514
Alignment:
Q  312 aaaaccgaaaataacctatattacagaggataaaaacctattaacccta 360  Q
    |||||| ||| || |||||||||||||||||||  ||||||||||||||    
T  17466 aaaaccaaaagtaccctatattacagaggataatgacctattaacccta 17514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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