View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11538_low_126 (Length: 210)

Name: NF11538_low_126
Description: NF11538
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11538_low_126
NF11538_low_126
[»] chr7 (38 HSPs)
chr7 (1-110)||(36905678-36905787)
chr7 (1-110)||(31110777-31110886)
chr7 (1-110)||(4612087-4612196)
chr7 (1-110)||(19072921-19073030)
chr7 (1-112)||(31466356-31466467)
chr7 (1-110)||(47713502-47713611)
chr7 (1-110)||(48531474-48531583)
chr7 (1-112)||(36819848-36819959)
chr7 (1-110)||(47081132-47081241)
chr7 (1-85)||(44479746-44479830)
chr7 (1-111)||(28185410-28185520)
chr7 (1-110)||(23473969-23474078)
chr7 (1-110)||(35500747-35500856)
chr7 (1-110)||(37231563-37231672)
chr7 (1-110)||(37950945-37951054)
chr7 (1-110)||(42086638-42086747)
chr7 (1-110)||(42834292-42834401)
chr7 (1-110)||(47538075-47538184)
chr7 (9-112)||(34478006-34478109)
chr7 (5-110)||(10464115-10464220)
chr7 (1-110)||(36859208-36859317)
chr7 (1-93)||(21392170-21392262)
chr7 (1-79)||(18795171-18795249)
chr7 (1-111)||(32618941-32619051)
chr7 (1-110)||(2400437-2400546)
chr7 (1-79)||(46657785-46657863)
chr7 (5-81)||(36643318-36643394)
chr7 (1-64)||(42493563-42493626)
chr7 (1-64)||(44389332-44389395)
chr7 (1-49)||(33613365-33613413)
chr7 (5-64)||(3680394-3680453)
chr7 (8-79)||(4033447-4033518)
chr7 (75-110)||(42086864-42086899)
chr7 (4-38)||(29770546-29770580)
chr7 (5-63)||(30462180-30462238)
chr7 (5-51)||(35265780-35265826)
chr7 (5-63)||(40348563-40348621)
chr7 (76-112)||(19072767-19072803)
[»] chr5 (38 HSPs)
chr5 (1-110)||(29627420-29627529)
chr5 (1-110)||(32002014-32002123)
chr5 (5-110)||(39894937-39895042)
chr5 (1-112)||(4924836-4924947)
chr5 (1-111)||(40512679-40512789)
chr5 (1-110)||(32334638-32334747)
chr5 (4-112)||(5364579-5364687)
chr5 (1-110)||(5212922-5213031)
chr5 (1-110)||(42148459-42148568)
chr5 (1-111)||(43517059-43517169)
chr5 (1-110)||(22613709-22613818)
chr5 (1-112)||(39036562-39036673)
chr5 (1-111)||(37843574-37843684)
chr5 (5-110)||(4299833-4299938)
chr5 (1-110)||(14475230-14475339)
chr5 (1-110)||(16048237-16048346)
chr5 (1-110)||(23988729-23988838)
chr5 (9-110)||(35447997-35448098)
chr5 (1-110)||(39405916-39406025)
chr5 (1-110)||(41411157-41411266)
chr5 (1-112)||(35290438-35290549)
chr5 (5-110)||(970294-970399)
chr5 (1-110)||(1830807-1830916)
chr5 (1-105)||(37516297-37516401)
chr5 (1-112)||(38698115-38698226)
chr5 (1-96)||(40316274-40316369)
chr5 (8-110)||(43067380-43067482)
chr5 (1-64)||(19868732-19868795)
chr5 (3-79)||(19087647-19087723)
chr5 (1-93)||(25563652-25563744)
chr5 (5-64)||(2864110-2864169)
chr5 (1-81)||(30779775-30779855)
chr5 (1-110)||(16954775-16954881)
chr5 (1-49)||(24520357-24520405)
chr5 (1-30)||(19889805-19889834)
chr5 (75-111)||(23988578-23988614)
chr5 (5-65)||(27477697-27477757)
chr5 (5-57)||(35641822-35641874)
[»] chr1 (41 HSPs)
chr1 (1-110)||(38458882-38458991)
chr1 (1-110)||(50539412-50539521)
chr1 (1-110)||(25531930-25532039)
chr1 (1-110)||(32988349-32988458)
chr1 (1-110)||(37281244-37281353)
chr1 (1-112)||(30529048-30529159)
chr1 (1-111)||(50876516-50876626)
chr1 (1-110)||(23569674-23569783)
chr1 (1-111)||(49805251-49805361)
chr1 (1-110)||(16265185-16265294)
chr1 (1-110)||(16266314-16266423)
chr1 (1-110)||(24982503-24982612)
chr1 (1-110)||(42708652-42708761)
chr1 (1-112)||(29161995-29162106)
chr1 (1-110)||(1849852-1849962)
chr1 (1-110)||(3898571-3898680)
chr1 (5-110)||(26441790-26441895)
chr1 (1-110)||(39354264-39354373)
chr1 (1-110)||(48264811-48264920)
chr1 (1-110)||(52379141-52379250)
chr1 (7-110)||(43680228-43680331)
chr1 (1-108)||(48219644-48219751)
chr1 (1-93)||(16751470-16751562)
chr1 (1-79)||(3529328-3529406)
chr1 (1-110)||(4605151-4605260)
chr1 (5-93)||(47222371-47222459)
chr1 (2-79)||(21034560-21034637)
chr1 (8-110)||(45234849-45234951)
chr1 (1-110)||(41501607-41501716)
chr1 (8-94)||(14075892-14075978)
chr1 (1-110)||(50481428-50481537)
chr1 (1-64)||(23330604-23330668)
chr1 (5-57)||(32968166-32968218)
chr1 (5-52)||(45299376-45299423)
chr1 (7-57)||(3555257-3555307)
chr1 (5-79)||(31971418-31971492)
chr1 (9-71)||(38737871-38737933)
chr1 (75-113)||(50876361-50876399)
chr1 (1-30)||(32565898-32565927)
chr1 (75-112)||(48265037-48265074)
chr1 (75-111)||(25531777-25531813)
[»] chr8 (37 HSPs)
chr8 (1-111)||(3293100-3293210)
chr8 (1-110)||(30380682-30380791)
chr8 (1-116)||(37710051-37710166)
chr8 (1-110)||(38739809-38739918)
chr8 (1-113)||(23249004-23249116)
chr8 (1-108)||(38845759-38845866)
chr8 (1-110)||(30290076-30290185)
chr8 (1-110)||(43066278-43066387)
chr8 (1-107)||(40013803-40013909)
chr8 (1-110)||(2805476-2805585)
chr8 (1-110)||(8350880-8350989)
chr8 (1-110)||(29791094-29791203)
chr8 (1-110)||(31127805-31127914)
chr8 (1-113)||(2986477-2986589)
chr8 (1-110)||(6470997-6471106)
chr8 (5-110)||(18809432-18809537)
chr8 (1-110)||(45081964-45082073)
chr8 (1-111)||(13138131-13138241)
chr8 (1-111)||(14522532-14522641)
chr8 (1-93)||(45253898-45253990)
chr8 (1-110)||(1580768-1580874)
chr8 (1-99)||(6470625-6470723)
chr8 (1-79)||(886100-886178)
chr8 (5-99)||(39361281-39361375)
chr8 (1-110)||(12893680-12893789)
chr8 (1-93)||(44123822-44123914)
chr8 (1-64)||(25256485-25256548)
chr8 (1-79)||(10658129-10658207)
chr8 (8-60)||(14847368-14847420)
chr8 (4-79)||(3383563-3383638)
chr8 (1-64)||(20167623-20167686)
chr8 (75-110)||(2805702-2805737)
chr8 (1-88)||(23764471-23764558)
chr8 (5-63)||(7603354-7603412)
chr8 (1-38)||(11854677-11854714)
chr8 (9-57)||(10535951-10535999)
chr8 (75-111)||(29790941-29790977)
[»] chr6 (25 HSPs)
chr6 (1-110)||(643431-643540)
chr6 (1-110)||(8796201-8796310)
chr6 (1-111)||(25435563-25435673)
chr6 (1-111)||(22020428-22020538)
chr6 (1-112)||(18992055-18992166)
chr6 (1-111)||(20662058-20662168)
chr6 (1-110)||(7097873-7097982)
chr6 (1-110)||(11114717-11114826)
chr6 (1-110)||(16696016-16696125)
chr6 (1-110)||(31854970-31855079)
chr6 (1-112)||(30237319-30237430)
chr6 (5-110)||(25163320-25163425)
chr6 (1-110)||(24150893-24151002)
chr6 (1-110)||(33121694-33121803)
chr6 (1-110)||(13206953-13207062)
chr6 (1-110)||(19068771-19068880)
chr6 (1-58)||(29986210-29986267)
chr6 (5-63)||(12869377-12869435)
chr6 (75-113)||(31854815-31854853)
chr6 (5-52)||(995621-995668)
chr6 (5-52)||(2656633-2656680)
chr6 (5-52)||(2667288-2667335)
chr6 (1-63)||(19788625-19788687)
chr6 (3-52)||(17496279-17496328)
chr6 (5-57)||(16434596-16434648)
[»] chr2 (40 HSPs)
chr2 (1-110)||(34827064-34827173)
chr2 (1-111)||(27559727-27559837)
chr2 (1-111)||(44330536-44330646)
chr2 (5-112)||(42038679-42038786)
chr2 (1-108)||(44283281-44283388)
chr2 (1-110)||(7442891-7443000)
chr2 (1-110)||(18718391-18718500)
chr2 (4-111)||(32775902-32776009)
chr2 (1-110)||(4045233-4045342)
chr2 (5-110)||(9877083-9877188)
chr2 (1-110)||(14707535-14707643)
chr2 (5-110)||(23671532-23671637)
chr2 (1-110)||(24282960-24283069)
chr2 (1-110)||(40425249-40425358)
chr2 (1-111)||(20517570-20517680)
chr2 (1-110)||(3987232-3987341)
chr2 (1-110)||(14372229-14372338)
chr2 (1-110)||(39418020-39418129)
chr2 (1-104)||(36198957-36199060)
chr2 (1-99)||(30708880-30708978)
chr2 (1-110)||(38963671-38963780)
chr2 (1-79)||(332426-332504)
chr2 (1-79)||(4083359-4083437)
chr2 (1-110)||(41172757-41172866)
chr2 (1-110)||(43925074-43925183)
chr2 (1-109)||(38137533-38137640)
chr2 (1-104)||(40598281-40598384)
chr2 (1-110)||(13399105-13399214)
chr2 (1-110)||(41463517-41463626)
chr2 (1-64)||(1110444-1110507)
chr2 (1-64)||(16941857-16941920)
chr2 (1-64)||(17012522-17012585)
chr2 (1-111)||(42020202-42020313)
chr2 (1-104)||(4046002-4046104)
chr2 (1-38)||(7106430-7106467)
chr2 (16-64)||(30776246-30776294)
chr2 (8-88)||(42951543-42951622)
chr2 (5-52)||(15177427-15177474)
chr2 (5-63)||(27668005-27668063)
chr2 (5-57)||(5030337-5030389)
[»] chr4 (52 HSPs)
chr4 (1-112)||(46212348-46212459)
chr4 (1-111)||(5744082-5744192)
chr4 (1-110)||(4264286-4264395)
chr4 (1-110)||(7738819-7738928)
chr4 (1-112)||(1377184-1377294)
chr4 (1-111)||(19170538-19170648)
chr4 (1-110)||(3442344-3442453)
chr4 (9-110)||(6494750-6494851)
chr4 (1-110)||(18359973-18360082)
chr4 (1-110)||(36602846-36602955)
chr4 (1-110)||(47579438-47579547)
chr4 (1-113)||(20678585-20678697)
chr4 (1-112)||(3443385-3443496)
chr4 (1-112)||(28152143-28152254)
chr4 (1-107)||(19525717-19525823)
chr4 (1-110)||(4209511-4209620)
chr4 (1-110)||(5735423-5735532)
chr4 (1-110)||(26205704-26205813)
chr4 (1-99)||(49768597-49768695)
chr4 (1-110)||(3901139-3901248)
chr4 (1-110)||(25644511-25644620)
chr4 (1-110)||(37688033-37688142)
chr4 (1-110)||(39260132-39260241)
chr4 (1-110)||(39786357-39786466)
chr4 (1-110)||(45198340-45198449)
chr4 (1-110)||(46803784-46803893)
chr4 (9-110)||(55190566-55190667)
chr4 (9-105)||(5123162-5123258)
chr4 (1-99)||(28166426-28166524)
chr4 (1-110)||(6922940-6923049)
chr4 (1-110)||(19652256-19652365)
chr4 (1-105)||(19633854-19633958)
chr4 (1-110)||(23603647-23603756)
chr4 (1-112)||(21858917-21859028)
chr4 (1-112)||(21914780-21914891)
chr4 (1-93)||(50033172-50033264)
chr4 (1-81)||(23256087-23256167)
chr4 (1-93)||(50035688-50035780)
chr4 (1-79)||(51736985-51737063)
chr4 (1-48)||(50971611-50971658)
chr4 (5-63)||(39195537-39195595)
chr4 (1-93)||(55997263-55997355)
chr4 (5-64)||(18881315-18881374)
chr4 (1-90)||(19631460-19631550)
chr4 (8-110)||(40250736-40250838)
chr4 (1-55)||(53568503-53568557)
chr4 (9-64)||(19731212-19731267)
chr4 (5-52)||(37164074-37164121)
chr4 (1-64)||(39194064-39194127)
chr4 (5-52)||(46608271-46608318)
chr4 (1-53)||(26660562-26660614)
chr4 (1-105)||(35064129-35064232)
[»] chr3 (42 HSPs)
chr3 (1-110)||(21907148-21907257)
chr3 (1-110)||(54840128-54840237)
chr3 (1-110)||(38833815-38833924)
chr3 (1-110)||(48706846-48706955)
chr3 (1-112)||(51062542-51062653)
chr3 (1-110)||(7459820-7459929)
chr3 (1-110)||(10571144-10571253)
chr3 (1-110)||(45167451-45167560)
chr3 (1-112)||(8559003-8559114)
chr3 (1-110)||(18659204-18659313)
chr3 (1-110)||(29728098-29728207)
chr3 (1-110)||(52668486-52668595)
chr3 (1-113)||(49058008-49058120)
chr3 (8-112)||(53066529-53066633)
chr3 (15-110)||(34827419-34827514)
chr3 (1-110)||(17053016-17053125)
chr3 (1-110)||(37833052-37833161)
chr3 (1-99)||(1327464-1327562)
chr3 (1-79)||(25097218-25097296)
chr3 (5-107)||(47638211-47638313)
chr3 (1-110)||(32285176-32285285)
chr3 (5-110)||(32951136-32951241)
chr3 (1-93)||(43138003-43138095)
chr3 (1-99)||(38492203-38492301)
chr3 (1-106)||(36665170-36665275)
chr3 (5-110)||(54673934-54674039)
chr3 (1-110)||(46483702-46483809)
chr3 (1-99)||(48143915-48144013)
chr3 (9-110)||(4238494-4238595)
chr3 (1-79)||(35717886-35717964)
chr3 (109-148)||(45207033-45207072)
chr3 (1-110)||(3547420-3547530)
chr3 (1-64)||(7671359-7671422)
chr3 (1-48)||(10435286-10435333)
chr3 (5-64)||(20080943-20081001)
chr3 (1-48)||(27849103-27849150)
chr3 (5-52)||(33462763-33462810)
chr3 (5-64)||(48690209-48690268)
chr3 (75-110)||(54840354-54840389)
chr3 (5-63)||(50673724-50673782)
chr3 (5-53)||(3086297-3086345)
chr3 (167-199)||(45207091-45207123)
[»] scaffold0459 (1 HSPs)
scaffold0459 (1-99)||(12904-13002)
[»] scaffold0366 (2 HSPs)
scaffold0366 (1-99)||(10545-10643)
scaffold0366 (1-99)||(14211-14309)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-107)||(117473-117579)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-110)||(41217-41326)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-110)||(15216-15325)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-99)||(44119-44217)
[»] scaffold0604 (1 HSPs)
scaffold0604 (1-110)||(1266-1369)
[»] scaffold0340 (1 HSPs)
scaffold0340 (13-110)||(14502-14599)
[»] scaffold0687 (1 HSPs)
scaffold0687 (5-63)||(1036-1094)


Alignment Details
Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36905678 - 36905787
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||     
T  36905678 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatgtatattgtcaactgggtcatttatttagggac 36905777  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  36905778 ggagggagta 36905787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 31110777 - 31110886
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||| |||||||||||||||     
T  31110777 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatttcaagtcaattatgtatattgtcaactggatcatttatttagggac 31110876  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  31110877 ggagggagta 31110886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4612196 - 4612087
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||     
T  4612196 ttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggac 4612097  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  4612096 ggagggagta 4612087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19072921 - 19073030
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| || ||| ||||||||||||||||||||| |||||     
T  19072921 ttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaactgggtcatttattaagggac 19073020  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  19073021 ggagggagta 19073030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 31466467 - 31466356
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||| ||||||||||| |||||     
T  31466467 ttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggac 31466368  T
Q  101 ggagggagtaat 112  Q
    ||||||||||||    
T  31466367 ggagggagtaat 31466356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 47713611 - 47713502
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||     
T  47713611 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggac 47713512  T
Q  101 ggagggagta 110  Q
     |||||||||    
T  47713511 agagggagta 47713502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 48531474 - 48531583
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| || ||| ||||||||| |||||| |||| |||||     
T  48531474 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggac 48531573  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  48531574 ggagggagta 48531583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 36819848 - 36819959
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  36819848 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 36819947  T
Q  101 ggagggagtaat 112  Q
    ||||||||||||    
T  36819948 ggagggagtaat 36819959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47081132 - 47081241
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||| ||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  47081132 ttacatgatattatttatctttgtggattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 47081231  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  47081232 ggagggagta 47081241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 44479830 - 44479746
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggt 85  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||| |||||||||||||    
T  44479830 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggt 44479746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 28185520 - 28185410
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || |||||||||  |||||||||| |||||     
T  28185520 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactatgtcatttattaagggac 28185421  T
Q  101 ggagggagtaa 111  Q
    |||| ||||||    
T  28185420 ggagagagtaa 28185410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23474078 - 23473969
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||| ||||||||  ||||||| |||||||||||| |||||||| || ||| ||||||||| ||||||||||| |||||     
T  23474078 ttacatgatattatttatctttgtaaattagtaggaaagtatggtcaaagtatgtaaagtcaataatgtatattgtcaactaggtcatttattaagggac 23473979  T
Q  101 ggagggagta 110  Q
    ||| ||||||    
T  23473978 ggatggagta 23473969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35500856 - 35500747
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||| |||||||||| |||| |||||||||||||| | |||||||| || ||| ||||||||| ||||| ||||| |||||     
T  35500856 ttacatgatattatttatctttatgaattagtagaaaaatatagtcaaagtatcttaagtcaataatgtatattgtcaactaggtcaattattgagggac 35500757  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  35500756 ggagggagta 35500747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37231672 - 37231563
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| || ||| ||||||||| |||| |||||| |||||     
T  37231672 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcgtttattgagggac 37231573  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  37231572 ggagggagta 37231563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37951054 - 37950945
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||| ||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  37951054 ttacatgatattatttatctttgtgaattagtaaaaaagtatgatcaaaatatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 37950955  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  37950954 ggagggagta 37950945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 42086747 - 42086638
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||| ||| || |||||||||   ||||||||| |||||     
T  42086747 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatatcaagtcaataatacatattgtcaactaaatcatttattaagggac 42086648  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  42086647 ggagggagta 42086638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 42834401 - 42834292
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||| ||||| ||  || ||||| ||| ||||||||||| |||||     
T  42834401 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaaatcaataatgcatattgtcgactaggtcatttattaagggac 42834302  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  42834301 ggagggagta 42834292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47538075 - 47538184
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||| || || ||| ||||||||| |||||| |||| ||||      
T  47538075 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaggtatgtcaagtccataatgtatattgtcaactaggtcatctattaaggggc 47538174  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  47538175 ggagggagta 47538184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 34478109 - 34478006
Alignment:
Q  9 tattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggagggag 108  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||| || ||||| || ||| ||||||||| ||||||||||| ||||| ||||||||    
T  34478109 tattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtatattgtcaactaggtcatttattgagggacggagggag 34478010  T
Q  109 taat 112  Q
    ||||    
T  34478009 taat 34478006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 10464220 - 10464115
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggag 104  Q
    |||||||||||||||||| |||||||||| |||| ||| |||||||||| | |||||||| || ||| ||||||||| ||||||||||| ||||| ||||    
T  10464220 atgatattatttatctttatgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggag 10464121  T
Q  105 ggagta 110  Q
    ||||||    
T  10464120 ggagta 10464115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 36859317 - 36859208
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||| ||||| ||  || |||||||||  |||||||||| |||||     
T  36859317 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaaatcaataatgcatattgtcaactaagtcatttattaagggac 36859218  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  36859217 ggagggagta 36859208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 21392170 - 21392262
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatt 93  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| ||| || ||| ||||||||| ||| |||||||    
T  21392170 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagttaataatgtatattgtcaactaggttatttatt 21392262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18795249 - 18795171
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaa 79  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| |||||||| |||||| |||||||    
T  18795249 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgtcaa 18795171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 32619051 - 32618941
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||||||| | |||||||| ||  || ||||||| | ||||||||||| |||||     
T  32619051 ttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatataaagtcaataatgcatattgtcaattaggtcatttattaagggac 32618952  T
Q  101 ggagggagtaa 111  Q
    ||| |||||||    
T  32618951 ggaaggagtaa 32618941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2400437 - 2400546
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| | |||||||| ||  || |||||||||   ||||||||| |||||     
T  2400437 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatataaagtcaataatgcatattgtcaactatatcatttattaagggac 2400536  T
Q  101 ggagggagta 110  Q
    ||||| ||||    
T  2400537 ggaggaagta 2400546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 46657785 - 46657863
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaa 79  Q
    |||||||||||||||||||||||| ||||| || |||| ||| ||||||| |||| |||||||| || ||| |||||||    
T  46657785 ttacatgatattatttatctttgtaaattaatagaaaaatatggtcaaagaatgttaagtcaataatgtatgttgtcaa 46657863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 36643318 - 36643394
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaact 81  Q
    ||||||||||||||||||||||||||||  |||| ||| |||||||||| | || ||||| || ||| |||||||||    
T  36643318 atgatattatttatctttgtgaattagtggaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaact 36643394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 42493626 - 42493563
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    ||||||||||||||||||||||||  ||||||| |||| ||| |||||||||||| | ||||||    
T  42493626 ttacatgatattatttatctttgtatattagtagaaaaatatggtcaaagtatgttaggtcaat 42493563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 44389395 - 44389332
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    |||||||||||||||||| |||||||||||||| |||| |||  ||||| ||||| ||||||||    
T  44389395 ttacatgatattatttatttttgtgaattagtagaaaaatattatcaaaatatgttaagtcaat 44389332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33613365 - 33613413
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaa 49  Q
    |||||||||||||||||| |||||||||||||| |||| ||| ||||||    
T  33613365 ttacatgatattatttatttttgtgaattagtaaaaaaatatggtcaaa 33613413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 3680453 - 3680394
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    |||||||||||||| |||||  |||||||||||| ||  |||||| ||||||||||||||    
T  3680453 atgatattatttatatttgtatattagtataaaaataaggtcaaaatatgtcaagtcaat 3680394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 4033447 - 4033518
Alignment:
Q  8 atattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaa 79  Q
    |||||||||||||||||  |||||||||||| ||  ||||||||| |||| ||||| ||||||  |||||||    
T  4033447 atattatttatctttgtatattagtataaaaatacggtcaaagtacgtcaggtcaaatatatacattgtcaa 4033518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 42086864 - 42086899
Alignment:
Q  75 gtcaactgggtcatttatttagggatggagggagta 110  Q
    ||||||| ||||||||||||||||||||||||||||    
T  42086864 gtcaactaggtcatttatttagggatggagggagta 42086899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 29770580 - 29770546
Alignment:
Q  4 catgatattatttatctttgtgaattagtataaaa 38  Q
    |||||||||||||||||||||||||||||| ||||    
T  29770580 catgatattatttatctttgtgaattagtagaaaa 29770546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 30462180 - 30462238
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaa 63  Q
    ||||||||||||||||||||  ||||||| |||| ||| ||||||||| || |||||||    
T  30462180 atgatattatttatctttgtatattagtaaaaaaatatggtcaaagtaagttaagtcaa 30462238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 35265780 - 35265826
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagt 51  Q
    ||||||||||||||||||||  ||||||| |||| ||||||||||||    
T  35265780 atgatattatttatctttgtatattagtagaaaaatatagtcaaagt 35265826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 40348563 - 40348621
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaa 63  Q
    ||||||||||||||||||||  ||||||| |||| ||| |||||| ||||||| |||||    
T  40348563 atgatattatttatctttgtatattagtagaaaaatatggtcaaaatatgtcaggtcaa 40348621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 19072803 - 19072767
Alignment:
Q  76 tcaactgggtcatttatttagggatggagggagtaat 112  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  19072803 tcaactaggtcatttatttagggacggagggagtaat 19072767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 29627420 - 29627529
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||     
T  29627420 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatgtatattgtcaactgggtcatttatttagggac 29627519  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  29627520 ggagggagta 29627529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32002123 - 32002014
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||     
T  32002123 ttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggac 32002024  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  32002023 ggagggagta 32002014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 39894937 - 39895042
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggag 104  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||||||||||||||| ||||| ||||    
T  39894937 atgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggag 39895036  T
Q  105 ggagta 110  Q
    ||||||    
T  39895037 ggagta 39895042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 4924947 - 4924836
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||| | |||||| |||| |||||     
T  4924947 ttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatatatattgtcaattaggtcatctattaagggac 4924848  T
Q  101 ggagggagtaat 112  Q
    ||||| ||||||    
T  4924847 ggaggaagtaat 4924836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 40512789 - 40512679
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || ||| |||||||||| |||||||||| |||||     
T  40512789 ttacatgatattatttatctttgtgaattagtagaaaagtatagtcaaagtatgtcaaatcaataatgtatattgtcaactgagtcatttattaagggac 40512690  T
Q  101 ggagggagtaa 111  Q
    |||| ||||||    
T  40512689 ggagagagtaa 40512679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32334747 - 32334638
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| ||||| || ||| ||||||||||||||||||||| |||||     
T  32334747 ttacatgatattatttatctttgtcaattagtataaaagtgtggtcaaagtatgtcaaatcaataatgtatattgtcaactgggtcatttattaagggac 32334648  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  32334647 ggagggagta 32334638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 5364579 - 5364687
Alignment:
Q  4 catgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatgga 103  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| || ||| ||||||||||||||||||||| ||||| |||    
T  5364579 catgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacgga 5364678  T
Q  104 gggagtaat 112  Q
    | |||||||    
T  5364679 gagagtaat 5364687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5213031 - 5212922
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||| ||||||||||| || ||     
T  5213031 ttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagagac 5212932  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  5212931 ggagggagta 5212922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42148459 - 42148568
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  42148459 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 42148558  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  42148559 ggagggagta 42148568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 43517169 - 43517059
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||| |||||| |||||||||  ||||| |||| |||||     
T  43517169 ttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatatatattgtcaactaagtcatctattaagggac 43517070  T
Q  101 ggagggagtaa 111  Q
    ||||| |||||    
T  43517069 ggaggaagtaa 43517059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22613818 - 22613709
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| || ||| ||||||||| ||||||||||| |||||     
T  22613818 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggac 22613719  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  22613718 ggagggagta 22613709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 39036562 - 39036673
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||| || ||| ||||||||| |||||| |||| |||||     
T  39036562 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgacaagtcaataatgtatattgtcaactaggtcatctattaagggac 39036661  T
Q  101 ggagggagtaat 112  Q
    ||||||| ||||    
T  39036662 ggagggaataat 39036673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 37843684 - 37843574
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||| |||||||||||||||| |||| ||| ||||||||||||||||||||| || ||| ||||||| | |||||| |||| |||||     
T  37843684 ttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaagtaggtcatctattgagggac 37843585  T
Q  101 ggagggagtaa 111  Q
    |||||||||||    
T  37843584 ggagggagtaa 37843574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 4299938 - 4299833
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggag 104  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| || ||| ||||||||| ||||||||||| ||||| ||||    
T  4299938 atgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggag 4299839  T
Q  105 ggagta 110  Q
    ||||||    
T  4299838 ggagta 4299833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 14475339 - 14475230
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||| |||||||||||||||| |||| ||| ||||||||||||||||||||| || ||| ||||||||| |||||| |||| | |||     
T  14475339 ttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattgaaggac 14475240  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  14475239 ggagggagta 14475230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16048237 - 16048346
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| || ||| ||||||||| ||||||||||| |||||     
T  16048237 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggac 16048336  T
Q  101 ggagggagta 110  Q
    ||| ||||||    
T  16048337 ggacggagta 16048346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23988729 - 23988838
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || |||||||||  |||||||||| |||||     
T  23988729 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaagggac 23988828  T
Q  101 ggagggagta 110  Q
    ||| ||||||    
T  23988829 ggatggagta 23988838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 35448098 - 35447997
Alignment:
Q  9 tattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggagggag 108  Q
    ||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| ||||| ||||||||    
T  35448098 tattatttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggag 35447999  T
Q  109 ta 110  Q
    ||    
T  35447998 ta 35447997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 39405916 - 39406025
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| || ||| ||||||||| ||||||||||| |||||     
T  39405916 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggaa 39406015  T
Q  101 ggagggagta 110  Q
    ||| ||||||    
T  39406016 ggatggagta 39406025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 41411266 - 41411157
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||| || |||||||| |||||| ||||||| |  ||||||||||||||||     
T  41411266 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgttaagtcaataatatatattgtcaaatacgtcatttatttagggac 41411167  T
Q  101 ggagggagta 110  Q
    ||| ||||||    
T  41411166 ggatggagta 41411157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 35290438 - 35290549
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||| |||||||||||||||||||||||||| |||| ||| ||||||||||| ||||||||| || ||| ||||||||| |||||| |||| |||||     
T  35290438 ttacataatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgacaagtcaataatgtatattgtcaactaggtcatctattaagggac 35290537  T
Q  101 ggagggagtaat 112  Q
    ||||| ||||||    
T  35290538 ggaggaagtaat 35290549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 970294 - 970399
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggag 104  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||| ||| || ||| ||||||||| ||||||||||| ||||| ||||    
T  970294 atgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagttaataatgtatattgtcaactaggtcatttattgagggacggag 970393  T
Q  105 ggagta 110  Q
    ||||||    
T  970394 ggagta 970399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1830807 - 1830916
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||| |||||||||| |||| ||| ||||||||| || |||||||| |||||| ||||||| |  ||||||||||||||||     
T  1830807 ttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtacgttaagtcaataatatatattgtcaaatacgtcatttatttagggac 1830906  T
Q  101 ggagggagta 110  Q
    ||| ||||||    
T  1830907 ggatggagta 1830916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 37516297 - 37516401
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||| || ||| ||||||||| ||| || |||| |||||     
T  37516297 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgtatattgtcaactaggttatctattaagggac 37516396  T
Q  101 ggagg 105  Q
    |||||    
T  37516397 ggagg 37516401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 38698115 - 38698226
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||| |||||||| |||||||| |||| ||| |||||||||| |||||||||| ||  || |||||||||  |||||||||| |||||     
T  38698115 ttacatgatattattcatctttgtaaattagtaaaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaagggac 38698214  T
Q  101 ggagggagtaat 112  Q
    ||||||||||||    
T  38698215 ggagggagtaat 38698226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 40316274 - 40316369
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttag 96  Q
    |||||||||||||||||||||| |||||||||| |||| ||| |||||| || || |||||||| |||||| ||||||| |  |||||||||||||    
T  40316274 ttacatgatattatttatctttatgaattagtagaaaaatatggtcaaattacgttaagtcaataatatatattgtcaaatacgtcatttatttag 40316369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 43067380 - 43067482
Alignment:
Q  8 atattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggaggga 107  Q
    ||||||||||||||||| |||||||| |||| ||| |||||||||| | || ||||| || ||| ||||||||| ||||||||||| ||||| ||| |||    
T  43067380 atattatttatctttgtaaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaactaggtcatttattgagggacggatgga 43067479  T
Q  108 gta 110  Q
    |||    
T  43067480 gta 43067482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19868795 - 19868732
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    ||||||||||||||||||||||||||||||||| |||| |||  ||||||||||| ||||||||    
T  19868795 ttacatgatattatttatctttgtgaattagtagaaaaatatcttcaaagtatgttaagtcaat 19868732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 19087723 - 19087647
Alignment:
Q  3 acatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaa 79  Q
    ||||||||||||||||||||||||||||||| |||| ||| |||||||||| | || ||||| || ||| |||||||    
T  19087723 acatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaa 19087647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25563652 - 25563744
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatt 93  Q
    ||||||||||| ||||||||||||||||||||| |||| |||  ||||||||||| || ||||| || ||  ||||||||| |||||| ||||    
T  25563652 ttacatgatataatttatctttgtgaattagtagaaaaatatgatcaaagtatgttaaatcaataatgtacattgtcaactaggtcatctatt 25563744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 2864110 - 2864169
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    ||||||||||||||||||||||||||||| |||| ||| || ||||||||| ||||||||    
T  2864110 atgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaat 2864169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 30779855 - 30779775
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaact 81  Q
    |||||||||||||||||||||||| |||||||| |||| |||| ||||||| | | || ||||| || ||| |||||||||    
T  30779855 ttacatgatattatttatctttgtaaattagtagaaaaatataatcaaagtgtattaaatcaataatgtatattgtcaact 30779775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16954775 - 16954881
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtc--aattatatattttgtcaactgggtcatttatttaggg 98  Q
    |||||||||||||||||||     ||||||||| |||| ||| ||||||| ||||||||||  || ||||||| |||||||||  ||||| |||| || |    
T  16954775 ttacatgatattatttatc-----gaattagtagaaaaatatggtcaaagcatgtcaagtcaaaaatatatatattgtcaactaagtcatctattaagag 16954869  T
Q  99 atggagggagta 110  Q
    | ||||||||||    
T  16954870 acggagggagta 16954881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24520357 - 24520405
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaa 49  Q
    |||||||||||| ||||||||| |||||||||| |||| ||||||||||    
T  24520357 ttacatgatattgtttatctttatgaattagtagaaaaatatagtcaaa 24520405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 19889805 - 19889834
Alignment:
Q  1 ttacatgatattatttatctttgtgaatta 30  Q
    ||||||||||||||||||||||||||||||    
T  19889805 ttacatgatattatttatctttgtgaatta 19889834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 23988614 - 23988578
Alignment:
Q  75 gtcaactgggtcatttatttagggatggagggagtaa 111  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  23988614 gtcaactaggtcatttatttagggacggagggagtaa 23988578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 27477697 - 27477757
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaatt 65  Q
    ||||||||||||||||||||  ||||||| |||| ||  |||||||||||| |||| ||||    
T  27477697 atgatattatttatctttgtatattagtaaaaaaatacggtcaaagtatgttaagttaatt 27477757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 35641874 - 35641822
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtca 57  Q
    |||||||||||||||||| |  ||||||| |||| ||| ||||||||||||||    
T  35641874 atgatattatttatctttatatattagtagaaaaatatggtcaaagtatgtca 35641822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 1e-43; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38458882 - 38458991
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||||||||| ||||||    
T  38458882 ttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggat 38458981  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  38458982 ggagggagta 38458991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 50539412 - 50539521
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||| |||||||||| |||||     
T  50539412 ttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaattatgtatattgtcaactgagtcatttattaagggac 50539511  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  50539512 ggagggagta 50539521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25531930 - 25532039
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| || ||| ||||||||| ||||||||||| |||||     
T  25531930 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcaactaggtcatttattaagggac 25532029  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  25532030 ggagggagta 25532039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32988458 - 32988349
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||| || ||| ||||||||||| ||||||||| |||||     
T  32988458 ttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaaatatgtcaagtcaataatgtatattgtcaactggatcatttattaagggac 32988359  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  32988358 ggagggagta 32988349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37281244 - 37281353
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||| ||||||||| | |||| |||| |||||     
T  37281244 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatatatattgtcaactagatcatctattaagggac 37281343  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  37281344 ggagggagta 37281353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 30529159 - 30529048
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||| || ||| ||||||||| ||||||||||| |||||     
T  30529159 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaattatctcaagtcaataatgtatattgtcaactaggtcatttattaagggac 30529060  T
Q  101 ggagggagtaat 112  Q
    ||||||||||||    
T  30529059 ggagggagtaat 30529048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 50876516 - 50876626
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  50876516 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 50876615  T
Q  101 ggagggagtaa 111  Q
    |||||||||||    
T  50876616 ggagggagtaa 50876626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23569783 - 23569674
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||| ||||||||||| |||||| |||||||   |||||||||||||||||     
T  23569783 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataatatatattgtcaaacaggtcatttatttagggac 23569684  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  23569683 ggagggagta 23569674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 49805361 - 49805251
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||  || ||| ||||||||||||||||||||| ||| |     
T  49805361 ttacatgatattatttatctttgtgaattagtattaaaatgtggtcaaagtatgtcaagtcaacaatgtatattgtcaactgggtcatttattaaggaac 49805262  T
Q  101 ggagggagtaa 111  Q
    |||||||||||    
T  49805261 ggagggagtaa 49805251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16265185 - 16265294
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| || ||| ||||||||| ||||||||||| |||||     
T  16265185 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggac 16265284  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  16265285 ggagggagta 16265294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16266314 - 16266423
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| || ||| ||||||||| ||||||||||| |||||     
T  16266314 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggac 16266413  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  16266414 ggagggagta 16266423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24982503 - 24982612
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| |||||| ||||||||  ||||||||||| |||||     
T  24982503 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatatatattgtcaacaaggtcatttattgagggac 24982602  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  24982603 ggagggagta 24982612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42708652 - 42708761
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  42708652 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 42708751  T
Q  101 ggagggagta 110  Q
    ||| ||||||    
T  42708752 ggatggagta 42708761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 29161995 - 29162106
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||||||| |||||||||| || ||| ||||||||| | || |||||| |||||     
T  29161995 ttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatctcaagtcaataatgtatattgtcaactagatcgtttattaagggac 29162094  T
Q  101 ggagggagtaat 112  Q
    ||||||||||||    
T  29162095 ggagggagtaat 29162106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1849852 - 1849962
Alignment:
Q  1 ttacatgata-ttatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    |||||||||| |||||||| |||||||||||||| |||||| | ||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||    
T  1849852 ttacatgatacttatttatttttgtgaattagtagaaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaaggga 1849951  T
Q  100 tggagggagta 110  Q
     ||| ||||||    
T  1849952 cggatggagta 1849962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3898680 - 3898571
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||| |||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| || ||| ||||||||| ||||||||||| |||||     
T  3898680 ttacataatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggac 3898581  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  3898580 ggagggagta 3898571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 26441790 - 26441895
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggag 104  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| || ||| ||||||||| ||||||||||| ||||| ||||    
T  26441790 atgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggag 26441889  T
Q  105 ggagta 110  Q
    ||||||    
T  26441890 ggagta 26441895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39354373 - 39354264
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||| ||  ||  |||||||| ||||||||||| |||||     
T  39354373 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatatcaagtcaataatgcatactgtcaactaggtcatttattaagggac 39354274  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  39354273 ggagggagta 39354264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 48264920 - 48264811
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||| |||| ||||| ||  || ||||||||| ||||||||||| |||||     
T  48264920 ttacatgatattatttatctttctgaattagtagaaaagtatggtcaaagtatatcaactcaataatgcatattgtcaactaggtcatttattaagggac 48264821  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  48264820 ggagggagta 48264811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 52379141 - 52379250
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| | |||     
T  52379141 ttacatgatattatttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaaaggac 52379240  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  52379241 ggagggagta 52379250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 43680228 - 43680331
Alignment:
Q  7 gatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggaggg 106  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| || ||| ||||||||| ||||||||||| ||||| ||||||    
T  43680228 gatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggaggg 43680327  T
Q  107 agta 110  Q
    ||||    
T  43680328 agta 43680331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 48219751 - 48219644
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||| || |||||||| ||||| |||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  48219751 ttacatgatattatttatctttgtgaattactagaaaagtatggtcaacgtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 48219652  T
Q  101 ggagggag 108  Q
    ||| ||||    
T  48219651 ggaaggag 48219644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 16751562 - 16751470
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatt 93  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||| ||||| |||||||| || ||| ||||||||| |||||| ||||    
T  16751562 ttacatgatattatttatctttgtgaattagtaaaaaaatatggtcaaaatatgttaagtcaataatgtatattgtcaactaggtcatgtatt 16751470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3529328 - 3529406
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaa 79  Q
    |||||||||||||||||||||| |||||||||| |||| ||| |||||||||||| |||||||| |||||| |||||||    
T  3529328 ttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtatgttaagtcaataatatatattgtcaa 3529406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 4605151 - 4605260
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||| ||  ||| ||| | |||||||||| |||||||| || ||| ||||||| | |||||| |||| |||||     
T  4605151 ttacatgatattatttatctttgtgaattaataggaaaatatggccaaagtatgtaaagtcaataatgtatattgtcaaataggtcatctattaagggac 4605250  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  4605251 ggagggagta 4605260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 47222371 - 47222459
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatt 93  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||||||||| |||||||| || ||| || |||| | |||||||||||    
T  47222371 atgatattatttatctttgtgaattagtaaaaaaatatggtcaaagtatgttaagtcaataatgtatattatcaaataggtcatttatt 47222459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 21034637 - 21034560
Alignment:
Q  2 tacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaa 79  Q
    ||||||||||||||||||||||||| |||||| |||| |||| ||||||||||| |||||||| || ||| |||||||    
T  21034637 tacatgatattatttatctttgtgatttagtagaaaaatataatcaaagtatgttaagtcaataatgtatattgtcaa 21034560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 45234951 - 45234849
Alignment:
Q  8 atattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggaggga 107  Q
    |||||| |||||||||| ||||| || ||||||||  |||||||||||||| | ||| || ||| ||||||||| ||||||||||| || || |||||||    
T  45234951 atattacttatctttgtaaattaataaaaaagtatgatcaaagtatgtcaaattaataatgtatattgtcaactaggtcatttattaagagacggaggga 45234852  T
Q  108 gta 110  Q
    |||    
T  45234851 gta 45234849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 41501716 - 41501607
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||| | ||||||||||||  || ||||  |||||||||||||| ||||| || ||| |||| |||| |||||| |||  ||||||    
T  41501716 ttacatgatattatttatttgtgtgaattagtaggaatgtatgatcaaagtatgtcaattcaataatgtatattgtgaactaggtcatctatcaagggat 41501617  T
Q  101 ggagggagta 110  Q
     |||||||||    
T  41501616 tgagggagta 41501607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 14075892 - 14075978
Alignment:
Q  8 atattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttattt 94  Q
    ||||||||||| |||||||||||||| |||| ||| || ||| ||||| |||||||| || ||| ||||||||| |||||| |||||    
T  14075892 atattatttatatttgtgaattagtagaaaaatatggttaaaatatgttaagtcaataatgtatattgtcaactaggtcatgtattt 14075978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 50481428 - 50481537
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||  || |||||||||||| | |||||| || ||| ||||||| | || ||| |||| |||||     
T  50481428 ttacatggtattatttacctttgtgaattagtagaaaaaaattgtcaaagtatgttaggtcaataatgtatattgtcaaataggccatctattgagggac 50481527  T
Q  101 ggagggagta 110  Q
    | ||||||||    
T  50481528 gtagggagta 50481537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23330604 - 23330668
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagt-atgtcaagtcaat 64  Q
    |||||||||||||||||| |||||||||||| ||||||  || |||||||| |||| ||||||||    
T  23330604 ttacatgatattatttatgtttgtgaattagcataaaaacattgtcaaagtaatgttaagtcaat 23330668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 32968218 - 32968166
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtca 57  Q
    ||||||||||||||||||||  |||||||||||| || ||||||| |||||||    
T  32968218 atgatattatttatctttgtatattagtataaaaatacagtcaaaatatgtca 32968166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 45299423 - 45299376
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagta 52  Q
    ||||||||||||||||||||  |||||||||||| ||| |||||||||    
T  45299423 atgatattatttatctttgtatattagtataaaaatatggtcaaagta 45299376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 3555307 - 3555257
Alignment:
Q  7 gatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtca 57  Q
    ||||||||||||||||||  ||||||| |||| |||| |||||||||||||    
T  3555307 gatattatttatctttgtatattagtagaaaaatatattcaaagtatgtca 3555257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 31971492 - 31971418
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaa 79  Q
    |||||||||||||||||||| |||||||| |||| |||  ||||| ||||| || | ||| |||||| |||||||    
T  31971492 atgatattatttatctttgttaattagtagaaaaatatgatcaaaatatgttaaattaataatatatattgtcaa 31971418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 38737933 - 38737871
Alignment:
Q  9 tattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatat 71  Q
    ||||||||||||||||||||||||| |||| |||  | ||||||||| || ||||| ||||||    
T  38737933 tattatttatctttgtgaattagtagaaaaatatgattaaagtatgttaaatcaataatatat 38737871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 113
Target Start/End: Complemental strand, 50876399 - 50876361
Alignment:
Q  75 gtcaactgggtcatttatttagggatggagggagtaatt 113  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  50876399 gtcaactaggtcatttatttagggacggagggagtaatt 50876361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 32565898 - 32565927
Alignment:
Q  1 ttacatgatattatttatctttgtgaatta 30  Q
    ||||||||||||||||||||||||||||||    
T  32565898 ttacatgatattatttatctttgtgaatta 32565927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 48265037 - 48265074
Alignment:
Q  75 gtcaactgggtcatttatttagggatggagggagtaat 112  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  48265037 gtcaactaggtcatttatttagggacggagggagtaat 48265074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 25531813 - 25531777
Alignment:
Q  75 gtcaactgggtcatttatttagggatggagggagtaa 111  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  25531813 gtcaactaggtcatttatttagggacggagggagtaa 25531777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 7e-42; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 3293210 - 3293100
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||     
T  3293210 ttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggac 3293111  T
Q  101 ggagggagtaa 111  Q
    |||||||||||    
T  3293110 ggagggagtaa 3293100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30380682 - 30380791
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||||| ||||||||| |||||     
T  30380682 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggac 30380781  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  30380782 ggagggagta 30380791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 37710051 - 37710166
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||| |||||||||| |||||||||| |||||     
T  37710051 ttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcatttattaagggac 37710150  T
Q  101 ggagggagtaattgat 116  Q
    ||| |||||| |||||    
T  37710151 ggatggagtacttgat 37710166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38739809 - 38739918
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| |||||| |||||||||||||||||||||   |||     
T  38739809 ttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaaatcaataatatatattgtcaactgggtcatttattaccggac 38739908  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  38739909 ggagggagta 38739918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 23249004 - 23249116
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  23249004 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 23249103  T
Q  101 ggagggagtaatt 113  Q
    |||||||||||||    
T  23249104 ggagggagtaatt 23249116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38845759 - 38845866
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||     
T  38845759 ttacatgatattatttatctttgtgaattagtataaaaatgtggtcaaagtatgtcaagtcaacaatgtatattgtcaactgggtcatttattaagggac 38845858  T
Q  101 ggagggag 108  Q
    ||||||||    
T  38845859 ggagggag 38845866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30290076 - 30290185
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  30290076 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 30290175  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  30290176 ggagggagta 30290185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43066278 - 43066387
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| || ||| ||||| ||| ||||||||||| |||||     
T  43066278 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcgactaggtcatttattaagggac 43066377  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  43066378 ggagggagta 43066387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 40013803 - 40013909
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||| || ||| |||||||||| |||||||| | |||||     
T  40013803 ttacatgatattatttatatttgtgaattaatataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcatttactaagggac 40013902  T
Q  101 ggaggga 107  Q
    |||||||    
T  40013903 ggaggga 40013909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2805585 - 2805476
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||| |||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  2805585 ttacatgatattatttttctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaatgatgcatattgtcaactaggtcatttattaagggac 2805486  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  2805485 ggagggagta 2805476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8350989 - 8350880
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||| | ||||| || |||| ||| ||||||||||||||||||||| || ||| ||||||||| ||||||||||| ||||||    
T  8350989 ttacatgatattatttatctttctaaattaatagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggat 8350890  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  8350889 ggagggagta 8350880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 29791094 - 29791203
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  29791094 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 29791193  T
Q  101 ggagggagta 110  Q
    | ||||||||    
T  29791194 gtagggagta 29791203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 31127914 - 31127805
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| |||  ||||||||| | |||||||| |||||| ||||||||| ||||||||||| |||||     
T  31127914 ttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtatattaagtcaataatatatattgtcaactaggtcatttattgagggac 31127815  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  31127814 ggagggagta 31127805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 2986477 - 2986589
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||| |||||||| |||||||| |||||||| |||||| |||||||||||||| || ||| |||||||||  |||||||||| |||||     
T  2986477 ttacatgatattattaatctttgtaaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaactaagtcatttattaagggac 2986576  T
Q  101 ggagggagtaatt 113  Q
    |||||||||||||    
T  2986577 ggagggagtaatt 2986589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 6470997 - 6471106
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||| || ||| ||||||||| |||||| |||| |||||     
T  6470997 ttacatgatattatttatctttatgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggac 6471096  T
Q  101 ggagggagta 110  Q
     |||||||||    
T  6471097 agagggagta 6471106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 18809432 - 18809537
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggag 104  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| || ||| ||||||||| ||||||||||| ||||| ||||    
T  18809432 atgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggag 18809531  T
Q  105 ggagta 110  Q
    ||||||    
T  18809532 ggagta 18809537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45081964 - 45082073
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||| |||||| |||| ||||| ||  || ||||||||| ||||||||||| |||||     
T  45081964 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcgaagtatatcaaatcaataatgcatattgtcaactaggtcatttattaagggac 45082063  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  45082064 ggagggagta 45082073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 13138241 - 13138131
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| || ||| || |||||| |||||| |||| | |||     
T  13138241 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgtcaagtcaataatgtatattatcaactaggtcatctattaaaggac 13138142  T
Q  101 ggagggagtaa 111  Q
    |||||||||||    
T  13138141 ggagggagtaa 13138131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 14522532 - 14522641
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||| ||||||||||| |||||||| |||||||| |||||||||| |||||||||| || ||| ||||||||| |||||| |||| |||||     
T  14522532 ttacatgatattttttatctttgt-aattagtagaaaagtatggtcaaagtatatcaagtcaataatgtatattgtcaactaggtcatctattaagggac 14522630  T
Q  101 ggagggagtaa 111  Q
    |||||||||||    
T  14522631 ggagggagtaa 14522641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 45253898 - 45253990
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatt 93  Q
    |||||||||||||||| |||||||||||||||| |||| ||| ||||||||||||||||||||| || ||| ||||||||| |||||| ||||    
T  45253898 ttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctatt 45253990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1580874 - 1580768
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| ||||| || ||| ||||   || ||||||||||| ||| |     
T  1580874 ttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaactcaataatgtatattgt---ctaggtcatttattaaggaac 1580778  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  1580777 ggagggagta 1580768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6470723 - 6470625
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||| ||| |||| ||||| || ||| ||||||||| |||||| |||| |||||    
T  6470723 ttacatgatattatttatctttatgaattagtagaaaagtatcgtcaaaatatctcaaatcaataatgtatattgtcaactaggtcatctattaaggga 6470625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 886178 - 886100
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaa 79  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| |||| ||| || ||| |||||||    
T  886178 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagttaataatgtatattgtcaa 886100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 39361281 - 39361375
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    |||||||||||||||||||||||||| || ||||||||  ||||||||| |||| ||||| ||  || ||||||||| ||||||||||| |||||    
T  39361281 atgatattatttatctttgtgaattaatagaaaagtatgatcaaagtatatcaaatcaataatgcatattgtcaactaggtcatttattaaggga 39361375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12893680 - 12893789
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||| ||||  || |||| ||| |||||||||||| |||||||| ||  || ||||||| | ||||||||| | |||||     
T  12893680 ttacatgatattatttatctttgtaaattgatagaaaaatatggtcaaagtatgttaagtcaataatgcatattgtcaaataggtcatttactgagggac 12893779  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  12893780 ggagggagta 12893789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 44123822 - 44123914
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatt 93  Q
    ||||||||||||||||||||||||||||||||| |||| ||| || ||||||||| |||||||  || ||| ||||||| | |||||| ||||    
T  44123822 ttacatgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaacaatgtatattgtcaaataggtcatctatt 44123914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25256485 - 25256548
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    |||||||||||||||||||||||| |||||||| |||| |||  ||||||||||| ||||||||    
T  25256485 ttacatgatattatttatctttgtaaattagtagaaaaatatgatcaaagtatgttaagtcaat 25256548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10658129 - 10658207
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaa 79  Q
    |||||| ||||||||||| ||||| |||||||| |||| ||| |||||||||||| |||||||| || ||| |||||||    
T  10658129 ttacataatattatttatatttgttaattagtagaaaaatatggtcaaagtatgttaagtcaataatgtatattgtcaa 10658207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 14847368 - 14847420
Alignment:
Q  8 atattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagt 60  Q
    |||||||||||||||||||||||||| |||| ||| |||||||||||| ||||    
T  14847368 atattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtaaagt 14847420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 3383563 - 3383638
Alignment:
Q  4 catgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaa 79  Q
    |||||||||||||||||||||||||||||  |||| |||  ||| ||||| | |||||||| |||||| |||||||    
T  3383563 catgatattatttatctttgtgaattagtgaaaaaatatgatcacagtatattaagtcaataatatatattgtcaa 3383638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 20167686 - 20167623
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    |||||||||||||||||| |||||||||||||| |||| |||  ||||| ||||| ||||||||    
T  20167686 ttacatgatattatttatttttgtgaattagtagaaaaatattatcaaaatatgttaagtcaat 20167623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 2805702 - 2805737
Alignment:
Q  75 gtcaactgggtcatttatttagggatggagggagta 110  Q
    ||||||||||||||||||||||||| ||||||||||    
T  2805702 gtcaactgggtcatttatttagggacggagggagta 2805737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 23764558 - 23764471
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcat 88  Q
    |||||||||||||||| ||||||||||||| || |||| |||  ||||| ||| |||| | ||| || ||| ||||||||| ||||||    
T  23764558 ttacatgatattatttttctttgtgaattaatagaaaaatatgatcaaaatatatcaaattaataatgtatattgtcaactaggtcat 23764471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 7603412 - 7603354
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaa 63  Q
    ||||||||||||||||||||  |||||||||||| ||  |||||| ||||||| |||||    
T  7603412 atgatattatttatctttgtatattagtataaaaatacggtcaaaatatgtcaggtcaa 7603354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 11854677 - 11854714
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaa 38  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  11854677 ttacaggatattatttatctttgtgaattagtagaaaa 11854714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 10535999 - 10535951
Alignment:
Q  9 tattatttatctttgtgaattagtataaaagtatagtcaaagtatgtca 57  Q
    ||||||||||||||||  |||||||||||| || ||| |||||||||||    
T  10535999 tattatttatctttgtatattagtataaaaatacagttaaagtatgtca 10535951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 29790977 - 29790941
Alignment:
Q  75 gtcaactgggtcatttatttagggatggagggagtaa 111  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  29790977 gtcaactaggtcatttatttagggacggagggagtaa 29790941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 3e-41; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 643540 - 643431
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||     
T  643540 ttacatgatattatttatctttgtgacttagtataaaagtatggtcaaagtatgtcaagtcaattatgtatattgtcaactgagtcatttatttagggac 643441  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  643440 ggagggagta 643431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8796201 - 8796310
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| || ||| ||||||||||||||||||||| |||||     
T  8796201 ttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgttaagtcaataatgtatattgtcaactgggtcatttattaagggac 8796300  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  8796301 ggagggagta 8796310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 25435563 - 25435673
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| || ||| ||||||||||||||||||||| |||||     
T  25435563 ttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaactgggtcatttattaagggac 25435662  T
Q  101 ggagggagtaa 111  Q
    |||| ||||||    
T  25435663 ggagagagtaa 25435673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 22020428 - 22020538
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||| || ||| ||||||||||||||||||| | |||||     
T  22020428 ttacatgatattatttatctttgtgaattagtataaaagtgtggttaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttaataagggac 22020527  T
Q  101 ggagggagtaa 111  Q
    |||||||||||    
T  22020528 ggagggagtaa 22020538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 18992055 - 18992166
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||| ||||||||||| |||||     
T  18992055 ttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggac 18992154  T
Q  101 ggagggagtaat 112  Q
    |||| |||||||    
T  18992155 ggagcgagtaat 18992166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 20662168 - 20662058
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  20662168 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 20662069  T
Q  101 ggagggagtaa 111  Q
    |||||||||||    
T  20662068 ggagggagtaa 20662058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7097982 - 7097873
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||| || ||| ||||||||||  ||||||||| |||||     
T  7097982 ttacatgatattatttatctttatgaattagtataaaagtatggtcaaagtatgttaagtcaataatctatattgtcaactgaatcatttattaagggac 7097883  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  7097882 ggagggagta 7097873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11114717 - 11114826
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| || ||| ||||||||||| ||||||||| || ||     
T  11114717 ttacatgatattatttatctttgtgaattagtataaaagtatggtcaaaatatgtcaaatcaataatgtatattgtcaactggatcatttattaagagac 11114816  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  11114817 ggagggagta 11114826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16696125 - 16696016
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| || ||| ||||||||| |||||| |||| |||||     
T  16696125 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaatgatgtatattgtcaactaggtcatctattgagggac 16696026  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  16696025 ggagggagta 16696016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 31854970 - 31855079
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||| |  ||| |||||||||| |||||||||| |||||     
T  31854970 ttacatgatattatttatctttgtgaattaatataaaagtgtggtcaaagtatgtcaagtcaataacgtatattgtcaactgagtcatttattaagggac 31855069  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  31855070 ggagggagta 31855079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 30237319 - 30237430
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||| ||||| |||||||||||||||||||| |||| ||| ||||||||||||||||||||| || ||| |||||||||  |||||||||| |||||     
T  30237319 ttacattatattgtttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactatgtcatttattaagggac 30237418  T
Q  101 ggagggagtaat 112  Q
    | ||||||||||    
T  30237419 gaagggagtaat 30237430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 25163320 - 25163425
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggag 104  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| || ||| |||||||||  |||||||||| ||||| ||||    
T  25163320 atgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactatgtcatttattgagggacggag 25163419  T
Q  105 ggagta 110  Q
    ||||||    
T  25163420 ggagta 25163425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24150893 - 24151002
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||| || |||||||| |||||||||| |||||||||| ||  || |||||||||   | ||||||| |||||     
T  24150893 ttacatgatattatttatctttgtgaattaatagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaaattatttattaagggac 24150992  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  24150993 ggagggagta 24151002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33121694 - 33121803
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||| |||||||||| |||| ||| |||||||||  |||||||||| |||||| |||||||   | |||||||||||||||     
T  33121694 ttacatgatattatttatctttatgaattagtagaaaaatatggtcaaagtacatcaagtcaataatatatattgtcaaacagatcatttatttagggac 33121793  T
Q  101 ggagggagta 110  Q
     |||||||||    
T  33121794 agagggagta 33121803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13207062 - 13206953
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||| |||| |||||||| |  ||| ||||||| | |||||| |||| || ||     
T  13207062 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagaatgttaagtcaataaagtatattgtcaaataggtcatctattgagtgac 13206963  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  13206962 ggagggagta 13206953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19068880 - 19068771
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||| || |||||||||||||||| |||| ||| |||||||||||| || ||||| ||  |||||||||| | | |||| |||| ||||||    
T  19068880 ttacatgatattacttctctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaataatgcattttgtcaaatagatcatctattgagggat 19068781  T
Q  101 ggagggagta 110  Q
    |||| |||||    
T  19068780 ggagagagta 19068771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29986267 - 29986210
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaa 58  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||||    
T  29986267 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaa 29986210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 12869377 - 12869435
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaa 63  Q
    ||||||||||||||||||||  ||||||| |||| ||| |||||| |||||||||||||    
T  12869377 atgatattatttatctttgtatattagtagaaaaatatggtcaaactatgtcaagtcaa 12869435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 113
Target Start/End: Complemental strand, 31854853 - 31854815
Alignment:
Q  75 gtcaactgggtcatttatttagggatggagggagtaatt 113  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  31854853 gtcaactgggtcatttatttagggacggagggagtaatt 31854815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 995668 - 995621
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagta 52  Q
    ||||||||||||||||||||  ||||||| |||| |||||||||||||    
T  995668 atgatattatttatctttgtatattagtagaaaaatatagtcaaagta 995621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 2656633 - 2656680
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagta 52  Q
    ||||||||||||||||||||  ||||||| |||| |||||||||||||    
T  2656633 atgatattatttatctttgtatattagtagaaaaatatagtcaaagta 2656680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 2667288 - 2667335
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagta 52  Q
    ||||||||||||||||||||  ||||||| |||| |||||||||||||    
T  2667288 atgatattatttatctttgtttattagtagaaaaatatagtcaaagta 2667335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19788687 - 19788625
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaa 63  Q
    |||||||||||||||||| |||||  ||||||| |||| ||| || ||||||||||| |||||    
T  19788687 ttacatgatattatttatatttgtatattagtagaaaaatatggttaaagtatgtcaggtcaa 19788625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 17496279 - 17496328
Alignment:
Q  3 acatgatattatttatctttgtgaattagtataaaagtatagtcaaagta 52  Q
    ||||||||||||||||||||||  ||||||| |||| ||| |||||||||    
T  17496279 acatgatattatttatctttgtatattagtagaaaaatatggtcaaagta 17496328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 16434648 - 16434596
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtca 57  Q
    ||||||||||||||||||||  ||||||  |||| ||| ||||||||||||||    
T  16434648 atgatattatttatctttgtatattagtggaaaaatatggtcaaagtatgtca 16434596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 34827064 - 34827173
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||     
T  34827064 ttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatatatattgtcaactgggtcatttattaagggac 34827163  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  34827164 ggagggagta 34827173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 27559727 - 27559837
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||     
T  27559727 ttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaaaaatgtatattgtcaactgggtcatttattaagggac 27559826  T
Q  101 ggagggagtaa 111  Q
    |||||||||||    
T  27559827 ggagggagtaa 27559837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 44330536 - 44330646
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||| || ||| ||||||||||||||||||| | |||||     
T  44330536 ttacatgatattatttatctttgtgaattagtataaaagtgtggttaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttaataagggac 44330635  T
Q  101 ggagggagtaa 111  Q
    |||||||||||    
T  44330636 ggagggagtaa 44330646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 42038679 - 42038786
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggag 104  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||||  ||||||||| ||||| ||||    
T  42038679 atgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgaatcatttattaagggacggag 42038778  T
Q  105 ggagtaat 112  Q
    ||||||||    
T  42038779 ggagtaat 42038786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 44283388 - 44283281
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  44283388 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 44283289  T
Q  101 ggagggag 108  Q
    ||||||||    
T  44283288 ggagggag 44283281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7443000 - 7442891
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||| | ||||||||| |||||     
T  7443000 ttacatgatattttttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactagatcatttattaagggac 7442901  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  7442900 ggagggagta 7442891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18718391 - 18718500
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  18718391 ttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 18718490  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  18718491 ggagggagta 18718500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 32776009 - 32775902
Alignment:
Q  4 catgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatgga 103  Q
    ||||||||||||| |||| ||||||||||| |||| ||| ||||||||||||||||||||| || ||| |||||||||||||||| |||| ||||| |||    
T  32776009 catgatattatttttcttagtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatctattgagggacgga 32775910  T
Q  104 gggagtaa 111  Q
    ||||||||    
T  32775909 gggagtaa 32775902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4045342 - 4045233
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||| ||||||||||||| | | |||||| |||||||||||||  || ||| ||||||| ||||||||||||| |||||     
T  4045342 ttacatgatattatttatctttgtaaattagtataaaaatgtggtcaaaatatgtcaagtcaacaatgtatattgtcaaatgggtcatttattaagggac 4045243  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  4045242 ggagggagta 4045233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 9877188 - 9877083
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggag 104  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| || ||| ||||||| | |||||| |||| ||||| ||||    
T  9877188 atgatattatttatctttgtgaattagtaaaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaattaggtcatctattaagggacggag 9877089  T
Q  105 ggagta 110  Q
    ||||||    
T  9877088 ggagta 9877083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 14707643 - 14707535
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||  |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  14707643 ttacatgatattatttatctttgtgaattagtagaaaagtat-gtcaaagtacatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 14707545  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  14707544 ggagggagta 14707535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 23671532 - 23671637
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggag 104  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||  ||||||||| ||  || ||||||||| ||||||||||| ||||| ||||    
T  23671532 atgatattatttatctttgtgaattagtagaaaagtatggtcaaagtataccaagtcaataatgcatattgtcaactaggtcatttattaagggacggag 23671631  T
Q  105 ggagta 110  Q
    ||||||    
T  23671632 ggagta 23671637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 24283069 - 24282960
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||| ||||| |||||| ||||||||| | |||| |||| |||||     
T  24283069 ttacatgatattatttatctttgtgaattagtaaaaaaatatagtcaaaatatgtcaaatcaataatatatattgtcaactagatcatctattgagggac 24282970  T
Q  101 ggagggagta 110  Q
    ||| ||||||    
T  24282969 ggaaggagta 24282960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40425358 - 40425249
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||||||| |||| ||||| ||  || ||||||||| ||||||||||| |||||     
T  40425358 ttacatgatattatttatctttgcgaattagtagaaaagtatggtcaaagtatatcaaatcaataatgcatattgtcaactaggtcatttattaagggac 40425259  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  40425258 ggagggagta 40425249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 20517570 - 20517680
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||| ||  || |||||||||  |||||||||| ||| |     
T  20517570 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaaggaac 20517669  T
Q  101 ggagggagtaa 111  Q
    |||||||||||    
T  20517670 ggagggagtaa 20517680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3987341 - 3987232
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||| ||| ||  || |||||||||  |||||||||| |||||     
T  3987341 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagttaataatgcatattgtcaactaagtcatttattaagggac 3987242  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  3987241 ggagggagta 3987232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 14372229 - 14372338
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||| |||||||||| |||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||| | ||||||||||| |||||     
T  14372229 ttacatgttattatttatatttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaattaggtcatttattaagggac 14372328  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  14372329 ggagggagta 14372338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39418129 - 39418020
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| || ||| |||||||||  |||||  ||| || ||     
T  39418129 ttacatgatattatttatctttgtgaattagtagaaaaatgtagtcaaagtatgtcaagtcaataatgtatattgtcaactaagtcatccattaagagac 39418030  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  39418029 ggagggagta 39418020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36199060 - 36198957
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||  |||||||||| |||| ||||| ||  || ||||||||| ||||||||||| |||||     
T  36199060 ttacatgatattatttatctttgtgaattagtagaaaagtacggtcaaagtatatcaaatcaataatgcatattgtcaactaggtcatttattaagggac 36198961  T
Q  101 ggag 104  Q
    ||||    
T  36198960 ggag 36198957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30708880 - 30708978
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    |||||||||||||||||||||||| |||||||| |||| ||| |||||| ||| |||||||||| || ||| ||||||||| ||||||||||| |||||    
T  30708880 ttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaatatatcaagtcaataatgtatattgtcaactaggtcatttattaaggga 30708978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38963671 - 38963780
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||| |||||||||||||||||||||||||| |||| |||  |||||||| ||||||||||| |||||| |||||||   | |||| ||||||||||     
T  38963671 ttacataatattatttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaataatatatattgtcaagcagatcatctatttagggac 38963770  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  38963771 ggagggagta 38963780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 332426 - 332504
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaa 79  Q
    ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| |||||||| || ||| |||||||    
T  332426 ttacatgatattatttatctttgtgaattagtaaaaaaatataatcaaagtatgttaagtcaataatgtatattgtcaa 332504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4083359 - 4083437
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaa 79  Q
    |||||||||||||||||||||||||| |||||| |||| ||| ||||||||||||||||||||| || ||| |||||||    
T  4083359 ttacatgatattatttatctttgtgatttagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaa 4083437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 41172866 - 41172757
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||| |||||||||||||||||| || ||||||||  ||||||||| |||||||||| ||  || ||||||||| | ||||||||| |||||     
T  41172866 ttacatgatatcatttatctttgtgaattaatagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaactagatcatttattaagggac 41172767  T
Q  101 ggagggagta 110  Q
    || |||||||    
T  41172766 ggggggagta 41172757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43925183 - 43925074
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| |||  ||||||||||| |||||||| || ||| || |||| | |||| | |||| |||||     
T  43925183 ttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtatgttaagtcaataatgtatattatcaaataggtcgtctattgagggac 43925084  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  43925083 ggagggagta 43925074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 38137640 - 38137533
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| ||||| || |||||| | ||||| | |||||| || | |||||     
T  38137640 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtc-ataatatatatcgtcaaataggtcatctaatgagggac 38137542  T
Q  101 ggagggagt 109  Q
    |||||||||    
T  38137541 ggagggagt 38137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 40598281 - 40598384
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||| || |||| ||| |||||||||| | || | ||| || ||| ||||||||| ||||||||||| |||||     
T  40598281 ttacatgatattatttatctttgtgaattattagaaaaatatggtcaaagtatattaaattaataatgtatattgtcaactaggtcatttattgagggag 40598380  T
Q  101 ggag 104  Q
    ||||    
T  40598381 ggag 40598384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13399214 - 13399105
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||| |||||||| |||| ||| || |||| |||| |||||||| || ||| ||||||||| | |||| |||| |||||     
T  13399214 ttacatgatattatttatctttgtaaattagtagaaaaatatggttaaagaatgttaagtcaataatgtatattgtcaactagatcatctattgagggac 13399115  T
Q  101 ggagggagta 110  Q
    || |||||||    
T  13399114 ggggggagta 13399105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 41463626 - 41463517
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||| |||||||| |||| | | || |||||||||||| ||||| || ||| ||||||||| | ||||||||| || ||     
T  41463626 ttacatgatattatttatctttgtaaattagtagaaaaatgtggtgaaagtatgtcaaatcaataatgtatattgtcaactagatcatttattgagagac 41463527  T
Q  101 ggagggagta 110  Q
    ||| ||||||    
T  41463526 ggaaggagta 41463517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1110444 - 1110507
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| || |||||    
T  1110444 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaaatcaat 1110507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16941920 - 16941857
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    |||||| |||||||| ||||||||||||||||| ||||||||  ||||||||| ||||||||||    
T  16941920 ttacataatattattcatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaat 16941857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17012585 - 17012522
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    |||||| |||||||| ||||||||||||||||| ||||||||  ||||||||| ||||||||||    
T  17012585 ttacataatattattcatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaat 17012522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 42020313 - 42020202
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtc-aaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    |||||||||||||||||| |||||||||||||| || | ||| ||| ||||||||| || ||||| || ||| ||||||| | ||| || |||| |||||    
T  42020313 ttacatgatattatttatatttgtgaattagtagaataatatggtctaaagtatgttaaatcaataatgtatattgtcaaataggttatctattgaggga 42020214  T
Q  100 tggagggagtaa 111  Q
     |||||||||||    
T  42020213 cggagggagtaa 42020202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 4046002 - 4046104
Alignment:
Q  1 ttacatgatat-tatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    ||||||||||| | |||||||||||||||||||| ||||||||   ||||||||||||| | | | |||||| ||||||||| |||||| |||| |||||    
T  4046002 ttacatgatatatttttatctttgtgaattagtagaaaagtat--gcaaagtatgtcaaatgagtaatatatattgtcaactaggtcatctattaaggga 4046099  T
Q  100 tggag 104  Q
     ||||    
T  4046100 cggag 4046104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7106430 - 7106467
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaa 38  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  7106430 ttacatgatattatttatctttgtgaattagtagaaaa 7106467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 30776294 - 30776246
Alignment:
Q  16 tatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    ||||||||| |||||||| |||| ||| |||||||||||||||||||||    
T  30776294 tatctttgtaaattagtagaaaaatattgtcaaagtatgtcaagtcaat 30776246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 42951543 - 42951622
Alignment:
Q  8 atattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcat 88  Q
    |||||||||||| ||||||||||||| |||| ||| |||||||||||| || ||||| |||||  ||||||| | ||||||    
T  42951543 atattatttatcgttgtgaattagta-aaaaatattgtcaaagtatgttaaatcaataatatacattgtcaaataggtcat 42951622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 15177474 - 15177427
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagta 52  Q
    ||||||||||||||||||||  |||||||||||| ||| |||||||||    
T  15177474 atgatattatttatctttgtatattagtataaaaatatggtcaaagta 15177427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 27668063 - 27668005
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaa 63  Q
    |||||||||||||||||||   |||| || |||| ||| ||||||||||||||||||||    
T  27668063 atgatattatttatctttgcatattactagaaaaatatggtcaaagtatgtcaagtcaa 27668005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 5030389 - 5030337
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtca 57  Q
    ||||||||||||||||||||  |||||||||||| ||   |||||||||||||    
T  5030389 atgatattatttatctttgtatattagtataaaaatacgatcaaagtatgtca 5030337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 4e-40; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 46212459 - 46212348
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| || ||| |||||||||| |||||||||| ||||||    
T  46212459 ttacatgatattatttatctttatgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcatttattaagggat 46212360  T
Q  101 ggagggagtaat 112  Q
    ||||||||||||    
T  46212359 ggagggagtaat 46212348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 5744192 - 5744082
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||  || ||| ||||||||||||||||||||| |||||     
T  5744192 ttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaaaaatgtatattgtcaactgggtcatttattaagggac 5744093  T
Q  101 ggagggagtaa 111  Q
    |||||||||||    
T  5744092 ggagggagtaa 5744082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 4264286 - 4264395
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| |||||||||  |||||||||| |||||     
T  4264286 ttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaagtcatttattaagggac 4264385  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  4264386 ggagggagta 4264395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7738928 - 7738819
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||| ||||||||||| |||||     
T  7738928 ttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggac 7738829  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  7738828 ggagggagta 7738819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 1377184 - 1377294
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| || ||| ||||||||||| ||||||||| |||||     
T  1377184 ttacatgatattatttatatttgtgaattagtataaaagtat-gtcaaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggac 1377282  T
Q  101 ggagggagtaat 112  Q
     |||||||||||    
T  1377283 agagggagtaat 1377294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 19170648 - 19170538
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||| ||||||||||| |||||| |||||||   |||||||||||||||||     
T  19170648 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtacgtcaagtcaataatatatattgtcaaacaggtcatttatttagggac 19170549  T
Q  101 ggagggagtaa 111  Q
    |||||||||||    
T  19170548 ggagggagtaa 19170538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3442453 - 3442344
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  3442453 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 3442354  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  3442353 ggagggagta 3442344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 6494750 - 6494851
Alignment:
Q  9 tattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggagggag 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||| || ||| ||||||||||||||||||||| ||||| ||| ||||    
T  6494750 tattatttatctttgtgaattagtataaaagtatggtcaaagtatgttaagtcaataatgtatattgtcaactgggtcatttattaagggacggaaggag 6494849  T
Q  109 ta 110  Q
    ||    
T  6494850 ta 6494851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18360082 - 18359973
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| || ||| ||||||||| |||||| |||| |||||     
T  18360082 ttacatgatattatttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggac 18359983  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  18359982 ggagggagta 18359973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 36602846 - 36602955
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| || ||| ||||||||| |||||| |||| |||||     
T  36602846 ttacatgatattatttatctttgtgaattagtagaaaaatataatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggac 36602945  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  36602946 ggagggagta 36602955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47579438 - 47579547
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  47579438 ttacatgatattatttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 47579537  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  47579538 ggagggagta 47579547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 20678697 - 20678585
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  20678697 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 20678598  T
Q  101 ggagggagtaatt 113  Q
    ||||| |||||||    
T  20678597 ggaggaagtaatt 20678585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 3443496 - 3443385
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||| |||||||||| |||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||| ||||||||||| |||||     
T  3443496 ttacatgatattacttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggag 3443397  T
Q  101 ggagggagtaat 112  Q
    |||| |||||||    
T  3443396 ggagagagtaat 3443385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 28152143 - 28152254
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  28152143 ttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 28152242  T
Q  101 ggagggagtaat 112  Q
    ||||||||||||    
T  28152243 ggagggagtaat 28152254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19525823 - 19525717
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| |||||||| || ||| ||||||||| ||||||||||| |||||     
T  19525823 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaatgatgtatattgtcaactaggtcatttattgagggac 19525724  T
Q  101 ggaggga 107  Q
    |||||||    
T  19525723 ggaggga 19525717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 4209511 - 4209620
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||| ||||| || ||| ||||||||| |||||| |||| |||||     
T  4209511 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaaatcaataatgtatattgtcaactaggtcatctattaagggac 4209610  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  4209611 ggagggagta 4209620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 5735423 - 5735532
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  5735423 ttacatgatattatttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 5735522  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  5735523 ggagggagta 5735532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 26205813 - 26205704
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || |||||||||  |||||||||| |||||     
T  26205813 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaagggac 26205714  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  26205713 ggagggagta 26205704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 49768597 - 49768695
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||    
T  49768597 ttacatgatattatttatctttgtgaattagtaaaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaaggga 49768695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3901248 - 3901139
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| | ||||||||| |||||     
T  3901248 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactagatcatttattaagggac 3901149  T
Q  101 ggagggagta 110  Q
    ||||| ||||    
T  3901148 ggaggaagta 3901139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25644511 - 25644620
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| || ||| ||||||||| ||||||||||| | |||     
T  25644511 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattgaaggac 25644610  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  25644611 ggagggagta 25644620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37688142 - 37688033
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||| ||||| ||| || ||||||||| | ||||||||| ||| |     
T  37688142 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaaatcaataatacatattgtcaactagatcatttattaaggaac 37688043  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  37688042 ggagggagta 37688033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39260241 - 39260132
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||||||| || ||| ||||||||| |||||| |||| |||||     
T  39260241 ttacatgatattatttatctttgtgaattagtagaaaagtaggatcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggac 39260142  T
Q  101 ggagggagta 110  Q
    ||||| ||||    
T  39260141 ggaggaagta 39260132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39786466 - 39786357
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||| ||||| |||||| |||||||||  ||||| |||| |||||     
T  39786466 ttacatgatattattaaactttgtgaattagtataaaagtatggtcaaagtatgtcaaatcaataatatatattgtcaactaagtcatctattaagggac 39786367  T
Q  101 ggagggagta 110  Q
    | ||||||||    
T  39786366 gaagggagta 39786357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 45198449 - 45198340
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||  |||  ||||||||| | |||||||| || ||| ||||||||| ||||||||||| |||||     
T  45198449 ttacatgatattatttatctttgtgaattagtataaatttatgttcaaagtatattaagtcaataatgtatattgtcaactaggtcatttattaagggac 45198350  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  45198349 ggagggagta 45198340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 46803784 - 46803893
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  46803784 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 46803883  T
Q  101 ggagggagta 110  Q
     |||||||||    
T  46803884 agagggagta 46803893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 55190667 - 55190566
Alignment:
Q  9 tattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggagggag 108  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||| ||| || |||| ||||| ||||||||    
T  55190667 tattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggttatctattaagggacggagggag 55190568  T
Q  109 ta 110  Q
    ||    
T  55190567 ta 55190566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 5123258 - 5123162
Alignment:
Q  9 tattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggagg 105  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||| |||||| |||| ||||| |||||    
T  5123258 tattatttatctttgtgaattagtaaaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggacggagg 5123162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28166426 - 28166524
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||    
T  28166426 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaaggga 28166524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6923049 - 6922940
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| || ||| || |||||| ||||||||||| ||| |     
T  6923049 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattatcaactaggtcatttattgaggaac 6922950  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  6922949 ggagggagta 6922940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19652365 - 19652256
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||| ||||| |||||||||| |||| ||||||||||||||||||||||||| || ||| ||||||||| | |||| |||| |||||     
T  19652365 ttacatgatattatttttctttttgaattagtagaaaaatatagtcaaagtatgtcaagtcaataatgtatattgtcaactagatcatctattaagggac 19652266  T
Q  101 ggagggagta 110  Q
    ||||| ||||    
T  19652265 ggaggaagta 19652256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 19633958 - 19633854
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||| ||||| |||||||||| |||| ||| ||||||||| ||||||||||| |||||| ||||||||| |||||| |||| |||||     
T  19633958 ttacatgatattatttttctttttgaattagtagaaaaatatggtcaaagtaggtcaagtcaataatatatattgtcaactaggtcatctattgagggac 19633859  T
Q  101 ggagg 105  Q
    |||||    
T  19633858 ggagg 19633854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23603756 - 23603647
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||| ||||| |||||||||| |||| |||  |||||||||||||||||||| || ||| ||||||||| |||||| |||| ||| |     
T  23603756 ttacatgatattatttttctttttgaattagtagaaaaatatgttcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattgaggaac 23603657  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  23603656 ggagggagta 23603647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 21859028 - 21858917
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||  ||||| |||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| | ||||||||| |||||     
T  21859028 ttacatgatattaagtatctatgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataattcatattgtcaactagatcatttattaagggac 21858929  T
Q  101 ggagggagtaat 112  Q
    ||| ||||||||    
T  21858928 ggatggagtaat 21858917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 21914891 - 21914780
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||  ||||| |||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| | ||||||||| |||||     
T  21914891 ttacatgatattaagtatctatgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataattcatattgtcaactagatcatttattaagggac 21914792  T
Q  101 ggagggagtaat 112  Q
    ||| ||||||||    
T  21914791 ggatggagtaat 21914780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 50033172 - 50033264
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatt 93  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| |||||||| || ||| | ||||| | |||||| ||||    
T  50033172 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgttaagtcaataatgtatatcgtcaaataggtcatctatt 50033264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23256087 - 23256167
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaact 81  Q
    |||||| ||||||||||| |||||||||||||| |||||||| ||| ||||||||||| ||||| || ||| |||||||||    
T  23256087 ttacattatattatttatttttgtgaattagtagaaaagtatggtccaagtatgtcaaatcaataatgtatattgtcaact 23256167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 50035688 - 50035780
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatt 93  Q
    ||||||||||||||||||||||||||||||||| |||| ||| || ||||||||| |||||||  || ||| ||||||| | |||||| ||||    
T  50035688 ttacatgatattatttatctttgtgaattagtagaaaaatatggtgaaagtatgttaagtcaacaatgtatattgtcaaataggtcatctatt 50035780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 51737063 - 51736985
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaa 79  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||| ||| | |||||||| || ||| |||||||    
T  51737063 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaaatatattaagtcaataatgtatattgtcaa 51736985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 50971611 - 50971658
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaa 48  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||    
T  50971611 ttacatgatattatttatctttgtgaattagtagaaaagtattgtcaa 50971658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 39195595 - 39195537
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaa 63  Q
    ||||||||||||||||||||  |||||||||||| ||| |||||||||||||| |||||    
T  39195595 atgatattatttatctttgtatattagtataaaaatatggtcaaagtatgtcaggtcaa 39195537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 55997263 - 55997355
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatt 93  Q
    |||||||||||||||||| |||||||||||||| |||| ||| ||||||  || | |||||||| |||||| || |||| | |||||| ||||    
T  55997263 ttacatgatattatttatttttgtgaattagtagaaaaatatggtcaaaaaatattaagtcaataatatatattatcaaataggtcatctatt 55997355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 18881315 - 18881374
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    ||||||||||||||||||||  ||||||| |||| |||||||||||||| | ||||||||    
T  18881315 atgatattatttatctttgtatattagtagaaaaatatagtcaaagtatattaagtcaat 18881374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 19631460 - 19631550
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagta-taaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcattt 90  Q
    ||||||||||||||||||||||||||||||| |  |||| ||| |||||||||||| ||||| || || ||| || |||| | ||||||||    
T  19631460 ttacatgatattatttatctttgtgaattagcagaaaaaatatggtcaaagtatgttaagtctataatgtatattatcaaataggtcattt 19631550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 40250736 - 40250838
Alignment:
Q  8 atattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggaggga 107  Q
    ||||||||||| |||||  |||||||||||| ||  |||||| |||||||||||||| || ||| |||||||||  ||||| ||||  |||| ||| |||    
T  40250736 atattatttatatttgtatattagtataaaaataaggtcaaactatgtcaagtcaataatgtatattgtcaactatgtcatctattatgggacggaagga 40250835  T
Q  108 gta 110  Q
    |||    
T  40250836 gta 40250838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 53568503 - 53568557
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgt 55  Q
    |||||| |||||||||||||||||||||||||| |||| ||| |||||| |||||    
T  53568503 ttacataatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgt 53568557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 19731267 - 19731212
Alignment:
Q  9 tattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    |||||||||||||| |||||||| |||||  ||| |||||||||||| ||||||||    
T  19731267 tattatttatctttctgaattagcataaatatatggtcaaagtatgttaagtcaat 19731212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 37164121 - 37164074
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagta 52  Q
    ||||||||||||||||||||  ||||||| |||| |||||||||||||    
T  37164121 atgatattatttatctttgtatattagtagaaaaatatagtcaaagta 37164074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39194064 - 39194127
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    |||||| ||| | |||||||||||| ||||||| |||| || ||||||||||||| ||||||||    
T  39194064 ttacattataatgtttatctttgtgtattagtagaaaaatacagtcaaagtatgttaagtcaat 39194127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 46608318 - 46608271
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagta 52  Q
    ||||||||||||||||||||  |||||||||||| ||| |||||||||    
T  46608318 atgatattatttatctttgtatattagtataaaaatatggtcaaagta 46608271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26660562 - 26660614
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtat 53  Q
    ||||||||||||||||| |||| ||||||| || |||| ||| ||||||||||    
T  26660562 ttacatgatattatttacctttatgaattaatagaaaaatatggtcaaagtat 26660614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 35064129 - 35064232
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||| | ||||| |||||  ||||||| |||| || ||||||||||||| |||| |||  ||||| ||||||| | |||||| ||||  |||||    
T  35064129 ttacatgataatgtttatatttgtatattagtaaaaaa-tacagtcaaagtatgttaagttaatattatatattgtcaaataggtcatctattatgggat 35064227  T
Q  101 ggagg 105  Q
    |||||    
T  35064228 ggagg 35064232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 7e-39; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 21907148 - 21907257
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| |||||||||| |||||||||| |||||     
T  21907148 ttacatgatattatttatctttgtgaattagtataaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgagtcatttattaagggac 21907247  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  21907248 ggagggagta 21907257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 54840237 - 54840128
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||     
T  54840237 ttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggac 54840138  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  54840137 ggagggagta 54840128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38833815 - 38833924
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||| || ||| ||||||||||||||||||||| |||||     
T  38833815 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggac 38833914  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  38833915 ggagggagta 38833924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 48706955 - 48706846
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||| |||||| ||||||||||| ||||||||| |||||     
T  48706955 ttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaaatatgtcaagtcaataatatatattgtcaactggatcatttattaagggac 48706856  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  48706855 ggagggagta 48706846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 51062542 - 51062653
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| || ||| || ||||||| |||||||||| |||||     
T  51062542 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatgtcaagtcaataatgtatattatcaactgagtcatttattaagggac 51062641  T
Q  101 ggagggagtaat 112  Q
    ||||||||||||    
T  51062642 ggagggagtaat 51062653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7459929 - 7459820
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  7459929 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 7459830  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  7459829 ggagggagta 7459820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 10571253 - 10571144
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||| ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||| || ||| ||||||||||||| ||||||| |||||     
T  10571253 ttacttgatattatttatctttgtaaattagtataaaaatatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggttatttattaagggac 10571154  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  10571153 ggagggagta 10571144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45167451 - 45167560
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||| || ||| ||||||||||| |||| |||| |||||     
T  45167451 ttacatgatattatttatctttgtgaattagtataaaagtgtggtcaaaatatgtcaagtcaataatgtatattgtcaactggatcatatattaagggac 45167550  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  45167551 ggagggagta 45167560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 8559114 - 8559003
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| ||| |||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  8559114 ttacatgatattatttatctttgtgaattagtagaaatgtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 8559015  T
Q  101 ggagggagtaat 112  Q
    ||||||||||||    
T  8559014 ggagggagtaat 8559003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18659204 - 18659313
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||| |||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||     
T  18659204 ttacatgatattatttatctttatgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggac 18659303  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  18659304 ggagggagta 18659313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29728207 - 29728098
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||| || ||| ||||||||| | ||||||||| |||||     
T  29728207 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaaatatctcaagtcaataatgtatattgtcaactagatcatttattaagggac 29728108  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  29728107 ggagggagta 29728098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 52668595 - 52668486
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||| ||||||| |||||     
T  52668595 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtgatttattaagggac 52668496  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  52668495 ggagggagta 52668486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 49058008 - 49058120
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| |||  |||||||| ||||||||||| |||||| |||||||   |||||| ||||||||||     
T  49058008 ttacatgatattatttatctttgtgaattagtagaaaaatatgatcaaagtacgtcaagtcaataatatatattgtcaaagaggtcatctatttagggac 49058107  T
Q  101 ggagggagtaatt 113  Q
    |||||||||||||    
T  49058108 ggagggagtaatt 49058120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 53066529 - 53066633
Alignment:
Q  8 atattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggaggga 107  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||||||||||||| |||||| ||||||||| | |||| |||| ||||| |||||||    
T  53066529 atattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatatatattgtcaactagatcatctattaagggacggaggga 53066628  T
Q  108 gtaat 112  Q
    |||||    
T  53066629 gtaat 53066633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 34827419 - 34827514
Alignment:
Q  15 ttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggagggagta 110  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||||| |||||| ||||||||| ||||||||||| ||||| ||||||||||    
T  34827419 ttatctttgtaaattagtataaaagtatggtgaaagtatgtcaagtcaataatatatattgtcaactaggtcatttattaagggacggagggagta 34827514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17053016 - 17053125
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | || ||||| || ||| ||||||||||||||||||||| |||||     
T  17053016 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaaatcaataatgtatattgtcaactgggtcatttattgagggac 17053115  T
Q  101 ggagggagta 110  Q
    |||| |||||    
T  17053116 ggagagagta 17053125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37833052 - 37833161
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||| ||  || |||| |||| ||||||||||| |||||     
T  37833052 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatgcatattgttaactaggtcatttattaagggac 37833151  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  37833152 ggagggagta 37833161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 1327464 - 1327562
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||    
T  1327464 ttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaaggga 1327562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 25097296 - 25097218
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaa 79  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| ||| |||||||    
T  25097296 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaaatatgtatattgtcaa 25097218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 47638211 - 47638313
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggag 104  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||| || ||| ||||||| | |||||| |||| ||||| ||||    
T  47638211 atgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaaatcaataatgtatattgtcaattaggtcatctattaagggacggag 47638310  T
Q  105 gga 107  Q
    |||    
T  47638311 gga 47638313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32285285 - 32285176
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||| || ||| ||||||||| || ||| |||| ||| |     
T  32285285 ttacatgatattatttatctttgtgaattagtagaaaagtatgatcaaagtatgtcaagtcaataatgtatattgtcaactaggccatctattaaggaac 32285186  T
Q  101 ggagggagta 110  Q
    ||| ||||||    
T  32285185 ggatggagta 32285176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 32951241 - 32951136
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggag 104  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||| || ||| ||||||||| | ||||||||| ||||| ||||    
T  32951241 atgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatattaagtcaataatgtatattgtcaactagatcatttattgagggacggag 32951142  T
Q  105 ggagta 110  Q
    ||||||    
T  32951141 ggagta 32951136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 43138003 - 43138095
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatt 93  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || |||||||||  ||||||||||    
T  43138003 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaagtcatttatt 43138095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 38492203 - 38492301
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    |||||||||||||||||||||||| |||||||| |||| ||| |||||||||||| || ||||| || ||| ||||||||| ||||||||||| |||||    
T  38492203 ttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaagtatgttaaatcaataatgtatattgtcaactaggtcatttattaaggga 38492301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 36665170 - 36665275
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| |||| ||| || ||| ||||||| | |||||| |||| |||||     
T  36665170 ttacatggtattatttatctttgtgaattagtagaaaaatatagtcaaagtatgttaagttaataatgtatattgtcaaataggtcatctattaagggac 36665269  T
Q  101 ggaggg 106  Q
    ||||||    
T  36665270 ggaggg 36665275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 54673934 - 54674039
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggag 104  Q
    |||||||||||||||||||| |||||||| |||| |||  |||||||| ||||| ||||| |||||| |||||||   | ||||||||||||||| ||||    
T  54673934 atgatattatttatctttgttaattagtagaaaaatatgatcaaagtacgtcaaatcaataatatatattgtcaaacagatcatttatttagggacggag 54674033  T
Q  105 ggagta 110  Q
    ||||||    
T  54674034 ggagta 54674039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 46483702 - 46483809
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||| |||||||||||||||||||||||||| |||||||| |||  |||||||||| ||||| || ||| ||||||||| | |||| |||| |||||     
T  46483702 ttacataatattatttatctttgtgaattagtagaaaagtatggtc--agtatgtcaaatcaataatgtatattgtcaactagatcatctattaagggac 46483799  T
Q  101 ggagggagta 110  Q
     |||||||||    
T  46483800 agagggagta 46483809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 48143915 - 48144013
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    |||||||||||||||||||||||| |||||||| |||| ||| |||||| ||| | | |||||| |||||| ||||||| | ||||||||||| |||||    
T  48143915 ttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaaatatattatgtcaataatatatattgtcaaataggtcatttattgaggga 48144013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 4238595 - 4238494
Alignment:
Q  9 tattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggagggag 108  Q
    ||||||||||||||||||||||||  |||| ||| |||||||||| | |||| ||| || ||| |||||||||  |||||||||| ||||| ||||||||    
T  4238595 tattatttatctttgtgaattagtggaaaaatatggtcaaagtatattaagttaataatgtatattgtcaactaagtcatttattgagggacggagggag 4238496  T
Q  109 ta 110  Q
    ||    
T  4238495 ta 4238494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 35717964 - 35717886
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaa 79  Q
    |||||| |||||||||||||||||||||||||| |||| ||| |||||| ||||| |||||||| || ||| |||||||    
T  35717964 ttacataatattatttatctttgtgaattagtagaaaaatatggtcaaaatatgttaagtcaataatgtatattgtcaa 35717886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 109 - 148
Target Start/End: Original strand, 45207033 - 45207072
Alignment:
Q  109 taattgattaccacattatagtgaaagatatttatcaccc 148  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45207033 taattgattaccacattatagtgaaagatatttatcaccc 45207072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3547530 - 3547420
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaag-tatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    |||||| |||||||||||| ||||||| ||||| ||||  ||| |||||||||||| |||||||| || ||| ||||||| | |||||| |||| |||||    
T  3547530 ttacattatattatttatcattgtgaaatagtaaaaaaaatatggtcaaagtatgttaagtcaataatgtatattgtcaaataggtcatctattgaggga 3547431  T
Q  100 tggagggagta 110  Q
     | ||||||||    
T  3547430 cgaagggagta 3547420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7671422 - 7671359
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    |||||||||||||||||||||||||| ||| || |||| ||| ||||||  |||| ||||||||    
T  7671422 ttacatgatattatttatctttgtgagttaatagaaaaatattgtcaaaacatgttaagtcaat 7671359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10435286 - 10435333
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaa 48  Q
    |||||| |||||||||||||||||||||||||| |||| ||| |||||    
T  10435286 ttacataatattatttatctttgtgaattagtagaaaaatatggtcaa 10435333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 20081001 - 20080943
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    |||||||||||||||||| |  |||||||||||| |||||||||||||||| | ||||||    
T  20081001 atgatattatttatctttatatattagtataaaa-tatagtcaaagtatgttaggtcaat 20080943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27849103 - 27849150
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaa 48  Q
    |||||||||||||||||||||||| ||||| || |||||||| |||||    
T  27849103 ttacatgatattatttatctttgttaattaatagaaaagtatggtcaa 27849150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 33462810 - 33462763
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagta 52  Q
    ||||||||||||||||||||  ||||||| ||||||||||| ||||||    
T  33462810 atgatattatttatctttgtatattagtagaaaagtatagttaaagta 33462763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 48690209 - 48690268
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaat 64  Q
    ||||||||||||||||||||  ||||||| |||| ||| || ||| ||||||||||||||    
T  48690209 atgatattatttatctttgtatattagtagaaaaatattgttaaaatatgtcaagtcaat 48690268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 110
Target Start/End: Original strand, 54840354 - 54840389
Alignment:
Q  75 gtcaactgggtcatttatttagggatggagggagta 110  Q
    ||||||| ||||||||||||||||||||||||||||    
T  54840354 gtcaactaggtcatttatttagggatggagggagta 54840389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 50673782 - 50673724
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaa 63  Q
    ||||||||||||||||||||  ||||||| |||| ||| ||||||||| || |||||||    
T  50673782 atgatattatttatctttgtatattagtagaaaaatatggtcaaagtaagttaagtcaa 50673724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 3086297 - 3086345
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtat 53  Q
    ||||||||||||||||||||  ||||||| |||| ||| ||||||||||    
T  3086297 atgatattatttatctttgtatattagtaaaaaaatatggtcaaagtat 3086345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 45207091 - 45207123
Alignment:
Q  167 ttgtatgcagtgaatacaccaaatgtctatctc 199  Q
    ||||||| |||||||||||||||||||||||||    
T  45207091 ttgtatgtagtgaatacaccaaatgtctatctc 45207123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12904 - 13002
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||    
T  12904 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaaggga 13002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 10545 - 10643
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||    
T  10545 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaaggga 10643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14211 - 14309
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||    
T  14211 ttacatgatattatttatctttgtaaattagtagaaaagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaaggga 14309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 117473 - 117579
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||| ||| || ||||||||| ||||||||||| |||||     
T  117473 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagtatatcaagtcaataatacatattgtcaactaggtcatttattaagggac 117572  T
Q  101 ggaggga 107  Q
    |||||||    
T  117573 ggaggga 117579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 41326 - 41217
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |  ||| |||||||||  |||||||||| || ||     
T  41326 ttacatgatattatttatctttgtgaattagtataaaagtatggttaaagtatgtcaagtcaataacgtatattgtcaactaagtcatttattaagagac 41227  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  41226 ggagggagta 41217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 15325 - 15216
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    |||||||||||||||||||||||| |||||||| |  ||||| ||||||||||||||||||||| || ||| ||||||||| ||||||||||| |||||     
T  15325 ttacatgatattatttatctttgtaaattagtagactagtatggtcaaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggac 15226  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  15225 ggagggagta 15216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 44217 - 44119
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttaggga 99  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||    
T  44217 ttacatgatattatttatctttgtgaattagtagaaaagtatggtcaaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaaggga 44119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1266 - 1369
Alignment:
Q  1 ttacatgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggat 100  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||      ||||||| || ||| ||||||||| |||||| |||| | |||     
T  1266 ttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaagt------agtcaataatgtatattgtcaactaggtcatctattgacggac 1359  T
Q  101 ggagggagta 110  Q
    ||||||||||    
T  1360 ggagggagta 1369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 14502 - 14599
Alignment:
Q  13 atttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaattatatattttgtcaactgggtcatttatttagggatggagggagta 110  Q
    |||| |||||||||||||||| |||| |||||||||||||| |||| ||||| || ||| ||||||||| |||||| ||||  |||| ||| ||||||    
T  14502 atttttctttgtgaattagtagaaaaatatagtcaaagtatatcaaatcaataatgtatattgtcaactaggtcatctattgtgggacggatggagta 14599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 1094 - 1036
Alignment:
Q  5 atgatattatttatctttgtgaattagtataaaagtatagtcaaagtatgtcaagtcaa 63  Q
    ||||||||||||||||||||  |||||||||||| ||  |||||| ||||||| |||||    
T  1094 atgatattatttatctttgtatattagtataaaaatacggtcaaaatatgtcaggtcaa 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University