View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1153_low_15 (Length: 398)
Name: NF1153_low_15
Description: NF1153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1153_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 34190404 - 34190094
Alignment:
| Q |
9 |
gatgatgaagagagtggaagaagtgtggtttgagaagggaaatttggtatatgaatggtgcaaaaacatggtattgttgttgttgaaggatgaatacgtg |
108 |
Q |
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| T |
34190404 |
gatgatgaagagagtggaagaagtgtggtttgagaagggaaatttggtatatgaatggtgcaaaaacatggtattgttgttgttgaaggatgaatacgtg |
34190305 |
T |
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| Q |
109 |
aaagtggtgatggttttgttggtgatggaaggtttagggctaatgattcaactgttaaacgtacatatggacatgaatccattgttctttgttgtttggt |
208 |
Q |
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| T |
34190304 |
aaagtggtgatggttttgttggtgatggaaggtttagggctaatgattcaactgttaagcgtacatatggacatgaatccattgttctttgttgtttggt |
34190205 |
T |
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| Q |
209 |
tttcaattgtttgaaaacatgaaaggtatgttttggtttatgtaataagatttggtgttgaaaaggatgctacaagtttcgtagtttaagaaagagggtg |
308 |
Q |
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| T |
34190204 |
tttcaattgtttgaaaacatgaaaggtatgttttggtttatgtaataagatttggtgttgaaaaggatgctacaagtttcgtagtttaagaaagagggtg |
34190105 |
T |
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| Q |
309 |
tggatattgtt |
319 |
Q |
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| T |
34190104 |
tggattttgtt |
34190094 |
T |
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