View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1153_low_22 (Length: 364)

Name: NF1153_low_22
Description: NF1153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1153_low_22
NF1153_low_22
[»] chr3 (35 HSPs)
chr3 (15-312)||(19975800-19976093)
chr3 (233-310)||(33983013-33983090)
chr3 (233-301)||(6888731-6888799)
chr3 (233-302)||(27969502-27969571)
chr3 (185-312)||(21075847-21075974)
chr3 (185-312)||(27877546-27877673)
chr3 (185-312)||(43746242-43746370)
chr3 (208-263)||(10267898-10267953)
chr3 (185-304)||(21389771-21389890)
chr3 (185-312)||(46311878-46312005)
chr3 (233-312)||(50737950-50738029)
chr3 (233-312)||(50774825-50774904)
chr3 (245-302)||(42854312-42854369)
chr3 (211-312)||(46219118-46219219)
chr3 (217-312)||(2869025-2869120)
chr3 (192-301)||(7910145-7910254)
chr3 (192-263)||(9301047-9301118)
chr3 (192-263)||(26823077-26823148)
chr3 (192-263)||(32774428-32774499)
chr3 (212-263)||(43088028-43088079)
chr3 (192-263)||(54313332-54313403)
chr3 (212-278)||(29522805-29522871)
chr3 (192-301)||(31412121-31412229)
chr3 (192-301)||(41933298-41933407)
chr3 (227-269)||(43736046-43736088)
chr3 (192-301)||(55423737-55423846)
chr3 (212-261)||(1842599-1842648)
chr3 (212-263)||(3995087-3995138)
chr3 (212-301)||(7399722-7399812)
chr3 (212-263)||(10804543-10804594)
chr3 (192-263)||(17525307-17525378)
chr3 (192-263)||(26898277-26898348)
chr3 (192-263)||(50155531-50155602)
chr3 (192-301)||(1694999-1695108)
chr3 (208-301)||(15489101-15489194)
[»] chr4 (41 HSPs)
chr4 (40-312)||(19240790-19241048)
chr4 (189-312)||(44341214-44341337)
chr4 (192-312)||(32767602-32767722)
chr4 (233-312)||(43286269-43286348)
chr4 (247-312)||(3415234-3415299)
chr4 (185-312)||(20034257-20034384)
chr4 (233-312)||(52464103-52464182)
chr4 (185-312)||(39345852-39345980)
chr4 (234-312)||(2323804-2323882)
chr4 (234-312)||(27870043-27870121)
chr4 (211-312)||(45522521-45522622)
chr4 (211-312)||(47295585-47295686)
chr4 (211-312)||(54134477-54134578)
chr4 (192-312)||(9455303-9455423)
chr4 (185-312)||(17543768-17543896)
chr4 (232-312)||(32594064-32594144)
chr4 (218-312)||(951394-951488)
chr4 (218-312)||(1705199-1705292)
chr4 (192-301)||(15194500-15194609)
chr4 (192-301)||(56264393-56264502)
chr4 (233-302)||(34030327-34030396)
chr4 (240-312)||(1324942-1325014)
chr4 (232-312)||(34859066-34859146)
chr4 (192-263)||(40731191-40731262)
chr4 (192-263)||(54093976-54094047)
chr4 (192-301)||(401347-401456)
chr4 (192-301)||(26706897-26707006)
chr4 (192-301)||(35666604-35666713)
chr4 (233-301)||(51401349-51401417)
chr4 (212-263)||(6643303-6643354)
chr4 (212-263)||(16623521-16623572)
chr4 (212-263)||(19823653-19823704)
chr4 (212-263)||(24678331-24678382)
chr4 (192-263)||(39240414-39240485)
chr4 (192-263)||(51435564-51435635)
chr4 (192-263)||(56114183-56114254)
chr4 (192-278)||(50097439-50097525)
chr4 (192-301)||(53724884-53724993)
chr4 (212-301)||(53925363-53925452)
chr4 (249-298)||(41361292-41361341)
chr4 (226-262)||(32594851-32594887)
[»] chr7 (34 HSPs)
chr7 (15-176)||(7505374-7505535)
chr7 (15-176)||(31271936-31272097)
chr7 (212-311)||(7505258-7505357)
chr7 (230-312)||(31272123-31272205)
chr7 (233-302)||(47381487-47381556)
chr7 (234-302)||(33604585-33604653)
chr7 (212-300)||(35709925-35710013)
chr7 (185-312)||(23025182-23025309)
chr7 (211-312)||(1873656-1873757)
chr7 (185-312)||(39494005-39494133)
chr7 (192-301)||(8613774-8613883)
chr7 (212-301)||(47761690-47761779)
chr7 (211-312)||(16526208-16526309)
chr7 (185-312)||(10993206-10993334)
chr7 (192-263)||(32795773-32795844)
chr7 (192-263)||(34202642-34202713)
chr7 (192-263)||(37471505-37471576)
chr7 (192-301)||(24764212-24764321)
chr7 (192-301)||(39560526-39560635)
chr7 (192-263)||(30072084-30072155)
chr7 (208-263)||(33590275-33590330)
chr7 (192-275)||(47099201-47099284)
chr7 (217-280)||(49112590-49112653)
chr7 (212-278)||(13598117-13598183)
chr7 (233-275)||(17511311-17511353)
chr7 (233-275)||(17541861-17541903)
chr7 (225-263)||(35710647-35710685)
chr7 (209-263)||(36643395-36643449)
chr7 (203-280)||(17475716-17475793)
chr7 (203-280)||(17577421-17577498)
chr7 (226-263)||(34182087-34182124)
chr7 (233-310)||(41200245-41200322)
chr7 (232-312)||(2621446-2621526)
chr7 (219-259)||(31271507-31271547)
[»] chr6 (27 HSPs)
chr6 (15-176)||(27966567-27966722)
chr6 (212-304)||(27966740-27966832)
chr6 (233-312)||(20139234-20139313)
chr6 (233-312)||(22193556-22193635)
chr6 (189-312)||(31472452-31472575)
chr6 (211-312)||(15065947-15066048)
chr6 (192-301)||(2067165-2067274)
chr6 (234-312)||(10997760-10997838)
chr6 (243-312)||(3044299-3044368)
chr6 (243-312)||(12272226-12272295)
chr6 (192-301)||(17869230-17869339)
chr6 (192-263)||(22988151-22988222)
chr6 (192-263)||(23800174-23800245)
chr6 (192-301)||(2702977-2703086)
chr6 (211-312)||(11369564-11369666)
chr6 (212-301)||(26555218-26555307)
chr6 (212-301)||(29641046-29641135)
chr6 (214-263)||(4170937-4170986)
chr6 (225-301)||(31511238-31511314)
chr6 (212-276)||(13835967-13836031)
chr6 (233-304)||(32465657-32465729)
chr6 (212-259)||(17547561-17547608)
chr6 (218-301)||(31655523-31655606)
chr6 (192-301)||(9035080-9035189)
chr6 (225-263)||(15068034-15068072)
chr6 (212-301)||(15183747-15183836)
chr6 (243-301)||(17879033-17879091)
[»] chr2 (31 HSPs)
chr2 (192-312)||(15614122-15614242)
chr2 (185-312)||(38838004-38838131)
chr2 (225-312)||(5271092-5271179)
chr2 (185-312)||(15560532-15560659)
chr2 (192-313)||(4564937-4565057)
chr2 (212-312)||(25096324-25096424)
chr2 (232-312)||(42730728-42730807)
chr2 (232-287)||(20922773-20922828)
chr2 (185-312)||(29201372-29201499)
chr2 (234-312)||(21747437-21747515)
chr2 (233-312)||(9470844-9470923)
chr2 (185-312)||(40000753-40000879)
chr2 (185-312)||(40861001-40861128)
chr2 (211-304)||(26556474-26556568)
chr2 (192-301)||(27495903-27496012)
chr2 (212-263)||(1002507-1002558)
chr2 (192-301)||(1346260-1346369)
chr2 (212-301)||(2650090-2650179)
chr2 (233-311)||(17920808-17920886)
chr2 (212-301)||(35439538-35439627)
chr2 (214-263)||(13247786-13247835)
chr2 (215-263)||(30801211-30801259)
chr2 (212-263)||(28222971-28223022)
chr2 (192-263)||(36240734-36240805)
chr2 (192-301)||(10261329-10261438)
chr2 (192-301)||(10440160-10440269)
chr2 (262-312)||(17071256-17071306)
chr2 (262-312)||(17077328-17077378)
chr2 (192-301)||(31742899-31743008)
chr2 (226-264)||(42730064-42730102)
chr2 (225-278)||(18258065-18258118)
[»] chr5 (36 HSPs)
chr5 (185-312)||(38976205-38976332)
chr5 (185-312)||(37205995-37206122)
chr5 (217-300)||(33908117-33908200)
chr5 (201-275)||(31230310-31230384)
chr5 (204-312)||(35038728-35038836)
chr5 (185-312)||(6955748-6955875)
chr5 (185-312)||(9996260-9996387)
chr5 (185-312)||(38355982-38356109)
chr5 (211-312)||(21731734-21731835)
chr5 (185-312)||(6238202-6238330)
chr5 (185-312)||(6899912-6900040)
chr5 (185-312)||(35838127-35838255)
chr5 (211-312)||(36016291-36016392)
chr5 (212-313)||(36866135-36866236)
chr5 (236-312)||(10642053-10642129)
chr5 (185-312)||(24477303-24477431)
chr5 (233-301)||(38986610-38986678)
chr5 (211-313)||(6453030-6453133)
chr5 (211-312)||(4699912-4700014)
chr5 (192-301)||(26264372-26264481)
chr5 (192-301)||(28759352-28759461)
chr5 (212-263)||(20122764-20122815)
chr5 (189-312)||(20338469-20338592)
chr5 (185-312)||(42860272-42860399)
chr5 (212-301)||(2466308-2466397)
chr5 (192-302)||(4975760-4975870)
chr5 (238-302)||(1398370-1398434)
chr5 (211-263)||(1845488-1845540)
chr5 (233-284)||(3296166-3296217)
chr5 (192-263)||(7949708-7949779)
chr5 (192-263)||(16749011-16749082)
chr5 (192-263)||(17320426-17320497)
chr5 (112-154)||(4971315-4971357)
chr5 (213-263)||(19646960-19647010)
chr5 (225-263)||(26507293-26507331)
chr5 (192-261)||(39479404-39479473)
[»] chr8 (30 HSPs)
chr8 (233-312)||(42739369-42739448)
chr8 (192-292)||(6142935-6143035)
chr8 (185-304)||(15243801-15243920)
chr8 (232-312)||(2349713-2349792)
chr8 (185-312)||(30436423-30436551)
chr8 (185-312)||(35813392-35813520)
chr8 (235-312)||(3940690-3940767)
chr8 (185-312)||(45451728-45451856)
chr8 (185-312)||(3654264-3654391)
chr8 (217-312)||(9201129-9201224)
chr8 (192-301)||(5927100-5927209)
chr8 (192-301)||(6266293-6266402)
chr8 (212-301)||(15041357-15041446)
chr8 (212-301)||(24101755-24101844)
chr8 (212-301)||(26098295-26098384)
chr8 (212-301)||(38231735-38231824)
chr8 (192-301)||(31894922-31895030)
chr8 (232-312)||(28968213-28968293)
chr8 (192-263)||(11202169-11202240)
chr8 (212-263)||(37819271-37819322)
chr8 (215-301)||(40027766-40027852)
chr8 (212-301)||(7161592-7161681)
chr8 (192-301)||(41644164-41644273)
chr8 (192-301)||(41827541-41827650)
chr8 (208-263)||(5913354-5913409)
chr8 (215-301)||(7433431-7433517)
chr8 (212-263)||(27640026-27640077)
chr8 (212-262)||(24476390-24476440)
chr8 (192-301)||(41395833-41395942)
chr8 (214-263)||(44679165-44679214)
[»] chr1 (28 HSPs)
chr1 (233-312)||(46237603-46237682)
chr1 (185-301)||(31489462-31489578)
chr1 (185-312)||(9660784-9660911)
chr1 (219-300)||(32057588-32057669)
chr1 (185-312)||(12745597-12745725)
chr1 (185-312)||(12756586-12756714)
chr1 (213-312)||(33189046-33189145)
chr1 (185-312)||(42763210-42763337)
chr1 (185-312)||(43781128-43781255)
chr1 (211-312)||(45757225-45757326)
chr1 (192-301)||(5114926-5115035)
chr1 (215-301)||(19406667-19406753)
chr1 (212-263)||(39995470-39995521)
chr1 (192-275)||(45039035-45039118)
chr1 (233-312)||(48470436-48470515)
chr1 (212-301)||(1858786-1858875)
chr1 (112-154)||(24683447-24683489)
chr1 (192-301)||(30723321-30723430)
chr1 (192-301)||(41310519-41310628)
chr1 (192-301)||(48812530-48812639)
chr1 (215-263)||(28199276-28199324)
chr1 (243-302)||(15699330-15699389)
chr1 (212-275)||(21088540-21088603)
chr1 (212-263)||(44922250-44922301)
chr1 (192-263)||(48913639-48913710)
chr1 (212-263)||(50511991-50512042)
chr1 (214-263)||(42102249-42102298)
chr1 (192-260)||(40601724-40601792)
[»] scaffold0295 (1 HSPs)
scaffold0295 (225-312)||(6186-6273)
[»] scaffold0219 (1 HSPs)
scaffold0219 (211-312)||(16622-16723)
[»] scaffold0664 (1 HSPs)
scaffold0664 (192-301)||(7765-7874)
[»] scaffold1318 (1 HSPs)
scaffold1318 (192-263)||(1005-1076)
[»] scaffold0124 (1 HSPs)
scaffold0124 (192-263)||(40038-40109)
[»] scaffold0036 (1 HSPs)
scaffold0036 (212-263)||(27682-27733)
[»] scaffold0007 (1 HSPs)
scaffold0007 (212-263)||(56289-56340)
[»] scaffold1243 (1 HSPs)
scaffold1243 (212-301)||(2033-2122)
[»] scaffold0173 (1 HSPs)
scaffold0173 (234-301)||(21967-22034)


Alignment Details
Target: chr3 (Bit Score: 150; Significance: 3e-79; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 19976093 - 19975800
Alignment:
Q  15 tatgttagaatgctagtgttatatcagaggcttttgtgtttttt---ctgctcagtttgagtggtttgaggccattaataatattagttgttnnnnnnnn 111  Q
    ||||||||| ||||| || ||||||||||| |||||||||||||   |||||||| |||||||| |||||||||||||||||||||| ||||            
T  19976093 tatgttagattgctactgctatatcagaggattttgtgtttttttttctgctcagcttgagtggattgaggccattaataatattagctgttaaaatttt 19975994  T
Q  112 ttgtaaaaatgatagaactttaaaagtcatgccttcaaaaccacaccaaacttaacccacttgtannnnnnnngggctgccgggctacccgtagccctaa 211  Q
    || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||            |  ||||||||||||||| | ||    
T  19975993 ttataaaaatgatagaactttaaaagccattccttcaaaaccacaccaaacttaacccacttgtattttt-------tttcgggctacccgtagcgccaa 19975901  T
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattc 311  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  19975900 cgggctagcccggacgggtaacgagcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattagacccaagccctacattttattc 19975801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 33983090 - 33983013
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 310  Q
    ||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  33983090 cgggcttttccgggccgggctaaaaagccctggaaaaattcgggctccaattattaggcccaagccctacattttatt 33983013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 6888731 - 6888799
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagcccta 301  Q
    ||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  6888731 cgggcttttccgggccgggctaaaaagccctggaaaaattcgggctccaattattaggcccaagcccta 6888799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 27969571 - 27969502
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctac 302  Q
    ||||||||| ||| |||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  27969571 cgggctttttcggtccgggctaaaaagcccgggaaaaattcgggctccaattattaggcccaagccctac 27969502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 21075847 - 21075974
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  21075847 gggcttccgggcagcccgaagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 21075946  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| |||||||||||||||| |||||||    
T  21075947 attcggcccaagccctacattttattcg 21075974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 27877673 - 27877546
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  27877673 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 27877574  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| |||||||||||||||| |||||||    
T  27877573 attcggcccaagccctacattttattcg 27877546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 43746242 - 43746370
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 283  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  43746242 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaat 43746341  T
Q  284 tattaggcccaagccctacatattattcg 312  Q
    |||| |||||||||||||||| |||||||    
T  43746342 tattcggcccaagccctacattttattcg 43746370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 10267953 - 10267898
Alignment:
Q  208 ctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  10267953 ctaacgggctagccctaacgggtaacgggcttttaagggccgggctaaaaagccct 10267898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 304
Target Start/End: Complemental strand, 21389890 - 21389771
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    |||||| |||||||||||||||||  ||||||||||||  |||||   ||||||||||||||| |||| ||||| ||||    ||||| || |||| |||    
T  21389890 gggctggcgggctacccgtagcccgcacgggctagccctaacgggcttcgggcttttacgggctgggccaaaaaaccctatttaaatttgggctgccatt 21389791  T
Q  285 attaggcccaagccctacat 304  Q
     |||||||||||||||||||    
T  21389790 tttaggcccaagccctacat 21389771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 46312005 - 46311878
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || || || || |||||    
T  46312005 gggcttccgggcagcccgaagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaattttgggctccaatt 46311906  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| |||||||||||||||| |||||||    
T  46311905 attcggcccaagccctacattttattcg 46311878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 50737950 - 50738029
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||||||| |||  | |||||| ||||||||| |||||||    
T  50737950 cgggctttttcgggccgggctaaaaaaccctgaaaaaattcggactgctatttatcggcccaggccctacattttattcg 50738029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 50774904 - 50774825
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||||||| |||  | |||||| ||||||||| |||||||    
T  50774904 cgggctttttcgggccgggctaaaaaaccctgaaaaaattcggactgctatttatcggcccaggccctacattttattcg 50774825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 42854312 - 42854369
Alignment:
Q  245 ggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctac 302  Q
    ||||||||||||||||| || |||||||||| || |||||||||||||||||||||||    
T  42854312 ggccgggctaaaaagccttgaaaaaattcgggctccaattattaggcccaagccctac 42854369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 312
Target Start/End: Complemental strand, 46219219 - 46219118
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 310  Q
    ||||||||||||  |||||  | ||||||||||||||| ||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||    
T  46219219 acgggctagccctaacgggccaagggcttttacgggcccggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttatt 46219120  T
Q  311 cg 312  Q
    ||    
T  46219119 cg 46219118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 312
Target Start/End: Complemental strand, 2869120 - 2869025
Alignment:
Q  217 tagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||| |||||| | ||||||| |||||||||| |||||||||||  | |||||||| |||||||| | |||||||||| |||| | |||||||    
T  2869120 tagcccgtacgggttatgggctttcacgggccgggttaaaaagccctaaagaaattcgggctgcaattttcaggcccaagctctacgttttattcg 2869025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 7910145 - 7910254
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  7910145 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 7910243  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  7910244 cccaagcccta 7910254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 9301047 - 9301118
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  9301047 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 9301118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 26823148 - 26823077
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  26823148 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 26823077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 32774428 - 32774499
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  |||||  |||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  32774428 cgggctacccgcggccctttcgggctagccctaacgggtaccgggctttttagggccgggctaaaaagccct 32774499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 43088079 - 43088028
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  43088079 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 43088028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 54313332 - 54313403
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  |||||  |||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  54313332 cgggctacccgcggccctttcgggctagccctaacgggtaccgggctttttagggccgggctaaaaagccct 54313403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 278
Target Start/End: Original strand, 29522805 - 29522871
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggact 278  Q
    |||||||||||  ||||||| |||||||||  ||||||||||||||||||||   ||||||||||||    
T  29522805 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccctattaaaattcggact 29522871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 31412121 - 31412229
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||| |||||  |||||||||||  | ||||| |||| ||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  31412121 cgggctacccgtggccctt-cgggctagccctaatgggtaccgggtttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 31412218  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  31412219 cccaagcccta 31412229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 41933407 - 41933298
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| |||||||||| |||||||||   ||||||||| || |||| | |||||    
T  41933407 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctgaaaagccctattaaaattcgggct-caatattttagg 41933309  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  41933308 cccaagcccta 41933298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 43736088 - 43736046
Alignment:
Q  227 gggtaacgggcttttacgggccgggctaaaaagccctggaaaa 269  Q
    |||| |||||||||||||||||||||||||||||||| |||||    
T  43736088 gggttacgggcttttacgggccgggctaaaaagccctagaaaa 43736046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 55423846 - 55423737
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||| ||||   ||||||||| || |||| | |||||    
T  55423846 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccctattaaaattcgggct-caatattttagg 55423748  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  55423747 cccaagcccta 55423737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 1842648 - 1842599
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagcc 261  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||    
T  1842648 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagcc 1842599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 3995138 - 3995087
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  3995138 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccct 3995087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 7399812 - 7399722
Alignment:
Q  212 cgggctagcccggacgggtaa-cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    |||||||||||  ||||| || |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  7399812 cgggctagccctaacggggaatcgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 7399722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 10804543 - 10804594
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  |||||||  ||||||||| ||||||||||||||||||||    
T  10804543 cgggctagccctaacgggtactgggcttttaagggccgggctaaaaagccct 10804594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 17525307 - 17525378
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   ||||||||||| ||||| || |||||||||| | ||||||||||||||||||    
T  17525307 cgggctacccgcggcccattcgggctagccctgacggataccgggcttttaagagccgggctaaaaagccct 17525378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 26898348 - 26898277
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| ||| |||||| ||||||||||||||||||||    
T  26898348 cgggctacccgcggcccgttcgggctagccctaacgggtaccggacttttaagggccgggctaaaaagccct 26898277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 50155531 - 50155602
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||| ||||||||||||||||    
T  50155531 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggtcgggctaaaaagccct 50155602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 1695108 - 1694999
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  | ||||| |||| ||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  1695108 cgggctacccgcggcccattcgggctagccctaaagggtaccgggtttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 1695010  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  1695009 cccaagcccta 1694999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 15489194 - 15489101
Alignment:
Q  208 ctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    |||||||||||||||  ||||||| | | |||||| ||| ||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  15489194 ctaacgggctagccctaacgggtaccagacttttaagggtcgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 15489101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 312
Target Start/End: Complemental strand, 19241048 - 19240790
Alignment:
Q  40 agaggcttttgtgttttttctgctcagtttgagtggtttgaggccattaataatattagttgttnnnnnnnnttgtaaaaatgatagaactttaaaagtc 139  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||        || |||||||||| |||||||||||  |    
T  19241048 agaggcttttgtgttttttctgctcagtttgagtggattgaggccattaataatattagttgttaaaaaaaattataaaaatgattgaactttaaaac-c 19240950  T
Q  140 atgccttcaaaaccacaccaaacttaacccacttgtannnnnnnng-ggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggct 238  Q
    |||||||||||||||||||||||||||||||||||||          ||||||||||              ||||||||||||||||||||||||||  |    
T  19240949 atgccttcaaaaccacaccaaacttaacccacttgtatttttttccaggctgccggg--------------aacgggctagcccggacgggtaacggatt 19240864  T
Q  239 tttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||| || |||||||||| |||||| |||||||||| ||||||||||||||||||| |||||||| |||||||    
T  19240863 tttacaggtcgggctaaaatgccctgaaaaaattcgggctgcaattattaggcccaaaccctacattttattcg 19240790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 189 - 312
Target Start/End: Complemental strand, 44341337 - 44341214
Alignment:
Q  189 tgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattatta 288  Q
    ||||||||| ||| |||||| |||||||||||||| | |||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||     
T  44341337 tgccgggctgcccttagcccaaacgggctagcccgaaagggttacgggcttttacgggccgggctaaaaagccctggaagaatccggactgcaattattc 44341238  T
Q  289 ggcccaagccctacatattattcg 312  Q
    |||||||||||||||| |||||||    
T  44341237 ggcccaagccctacattttattcg 44341214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 192 - 312
Target Start/End: Complemental strand, 32767722 - 32767602
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 291  Q
    |||||| ||||| |||| ||||||||||||   ||||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32767722 cgggctgcccgtggcccgaacgggctagccttaacgggttccgggctttttcgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggc 32767623  T
Q  292 ccaagccctacatattattcg 312  Q
    |||||||||| || |||||||    
T  32767622 ccaagccctatattttattcg 32767602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 43286269 - 43286348
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||    
T  43286269 cgggctttttcgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacgttttattcg 43286348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 3415234 - 3415299
Alignment:
Q  247 ccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| | |||||||    
T  3415234 ccgggctaaaaagccctggaaaaattcgggctccaattattaggcccaagccctacgttttattcg 3415299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 20034257 - 20034384
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  20034257 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 20034356  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| |||||||||||||||| |||||||    
T  20034357 attcggcccaagccctacattttattcg 20034384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 52464103 - 52464182
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||| || ||||||||||||||| || ||||||||||| ||| |||||||||||||||||||||| | |||||||    
T  52464103 cgggctttttcgagccgggctaaaaagctcttgaaaaattcgggctgtaattattaggcccaagccctacgttttattcg 52464182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 39345980 - 39345852
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 283  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  39345980 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctattcaaatttcgggctccaat 39345881  T
Q  284 tattaggcccaagccctacatattattcg 312  Q
    |||| |||||||||||||||| |||||||    
T  39345880 tattcggcccaagccctacattttattcg 39345852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 2323804 - 2323882
Alignment:
Q  234 gggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||||    
T  2323804 gggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcg 2323882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 27870121 - 27870043
Alignment:
Q  234 gggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||||    
T  27870121 gggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattatttggcccaagccctacattttattcg 27870043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 312
Target Start/End: Complemental strand, 45522622 - 45522521
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 310  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||| ||    || ||||| || |||||||| |||||||||||||||| |||||    
T  45522622 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagctctcttcaatttcgggctccaattattcggcccaagccctacattttatt 45522523  T
Q  311 cg 312  Q
    ||    
T  45522522 cg 45522521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 312
Target Start/End: Complemental strand, 47295686 - 47295585
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 310  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| || ||||||||||||| |||||    
T  47295686 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggtccaagccctacattttatt 47295587  T
Q  311 cg 312  Q
    ||    
T  47295586 cg 47295585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 312
Target Start/End: Original strand, 54134477 - 54134578
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 310  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || || || || |||||||| |||||||||||||||| |||||    
T  54134477 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaattttgggctccaattattcggcccaagccctacattttatt 54134576  T
Q  311 cg 312  Q
    ||    
T  54134577 cg 54134578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 312
Target Start/End: Original strand, 9455303 - 9455423
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 291  Q
    |||||| |||||||||| ||| ||| |||||  |||||  |||| ||||| ||||||  |||||||||||||| |||||||||| |||||||||||  |     
T  9455303 cgggctgcccgtagcccgaactggccagccctaacgggctacggcctttttcgggcccagctaaaaagccctgaaaaaattcgggctgcaattattcagt 9455402  T
Q  292 ccaagccctacatattattcg 312  Q
    |||  |||||||| |||||||    
T  9455403 ccagtccctacattttattcg 9455423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 17543896 - 17543768
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 283  Q
    ||||| ||||||  |||| |||||  ||||||||||||  | |||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  17543896 gggcttccgggcagcccggagcccggacgggctagccctaatgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaat 17543797  T
Q  284 tattaggcccaagccctacatattattcg 312  Q
    |||| |||||||||||||||| |||||||    
T  17543796 tattcggcccaagccctacattttattcg 17543768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 32594144 - 32594064
Alignment:
Q  232 acgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    |||||||||| |||| |||| |||||||||||| |||||||||| ||||||||||| || ||| | ||||||| |||||||    
T  32594144 acgggctttttcgggtcgggttaaaaagccctgaaaaaattcgggctgcaattattcggtccaggtcctacattttattcg 32594064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 312
Target Start/End: Complemental strand, 951488 - 951394
Alignment:
Q  218 agcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||||||  | ||||||||||||||||||||||||||||||    || ||||| || || ||||| |||||||||| ||||| |||||||    
T  951488 agcccggacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccacttattcggcccaagccttacattttattcg 951394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 312
Target Start/End: Original strand, 1705199 - 1705292
Alignment:
Q  218 agcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    |||||| |||||  ||| |||||| ||||||||||||||||||||| ||||||||||| |||| |||||| ||||||  |||| ||| |||||||    
T  1705199 agcccgaacgggctacgagctttttcgggccgggctaaaaagccct-gaaaaattcgggctgctattatttggcccagaccctgcattttattcg 1705292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 15194609 - 15194500
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  15194609 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 15194511  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  15194510 cccaagcccta 15194500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 56264393 - 56264502
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  56264393 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 56264491  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  56264492 cccaagcccta 56264502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 302
Target Start/End: Complemental strand, 34030396 - 34030327
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctac 302  Q
    |||||||||||||||||||| |||||||||||   |||||| | |||| ||| |||||||||||||||||    
T  34030396 cgggcttttacgggccgggccaaaaagccctgtttaaattcaggctgccatttttaggcccaagccctac 34030327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 312
Target Start/End: Original strand, 1324942 - 1325014
Alignment:
Q  240 ttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    |||||||| ||||||||||||||||||||||||||| ||  |||| ||  ||||||||| ||||| |||||||    
T  1324942 ttacgggctgggctaaaaagccctggaaaaattcgggctctaatttttcagcccaagccttacattttattcg 1325014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 34859066 - 34859146
Alignment:
Q  232 acgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||||  ||||||||||||||||||||| |||||||| | || | |||||| |||||| ||||| ||| |||||||    
T  34859066 acgggcttttttgggccgggctaaaaagccctgaaaaaattcaggcttctattattcggcccaggccctgcattttattcg 34859146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 40731191 - 40731262
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   ||| |||||||  |||||||||||||||||| ||||||||||||||||||||    
T  40731191 cgggctacccgcggcccattcggactagccctaacgggtaacgggcttttaagggccgggctaaaaagccct 40731262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 54093976 - 54094047
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    ||||||||||| |||||   |||||||||||  ||||||| ||| |||||| ||||||||||||||||||||    
T  54093976 cgggctacccgcagcccattcgggctagccctaacgggtaccggacttttaagggccgggctaaaaagccct 54094047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 401347 - 401456
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| |||||| |||||||||||||   ||||||||| || |||| | |||||    
T  401347 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgagctaaaaagccctattaaaattcgggct-caatattttagg 401445  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  401446 cccaagcccta 401456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 26706897 - 26707006
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| |||||||||||||||||| |   ||||||||| || |||| | |||||    
T  26706897 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccatattaaaattcgggct-caatattttagg 26706995  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  26706996 cccaagcccta 26707006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 35666713 - 35666604
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| |||||||| |||||||||||   ||||||||| || |||| | |||||    
T  35666713 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccggggtaaaaagccctattaaaattcgggct-caatattttagg 35666615  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  35666614 cccaagcccta 35666604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 51401349 - 51401417
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagcccta 301  Q
    |||| |||| |||||||||||||||||| |||||||||||||| ||| |||| ||  |||||| |||||    
T  51401349 cgggttttttcgggccgggctaaaaagctctggaaaaattcgggctggaatttttgagcccaaacccta 51401417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 6643303 - 6643354
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||| ||||    
T  6643303 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccct 6643354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 16623572 - 16623521
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  16623572 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccct 16623521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 19823653 - 19823704
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||||| |||||||||| ||||||| ||||||||||||    
T  19823653 cgggctagccctaacgggtaccgggcttttaagggccggtctaaaaagccct 19823704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 24678382 - 24678331
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||| ||||    
T  24678382 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccct 24678331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 39240414 - 39240485
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   ||||||||| |  ||||||| |||||||||| ||||||||||||||||||||    
T  39240414 cgggctacccgcggcccattcgggctagctctaacgggtaccgggcttttaagggccgggctaaaaagccct 39240485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 51435564 - 51435635
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   ||||||||||   ||||||| |||||||||| ||||||||||||||||||||    
T  51435564 cgggctacccgcggcccattcgggctagccttaacgggtaccgggcttttaagggccgggctaaaaagccct 51435635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 56114183 - 56114254
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||| ||||   |||||||||||  ||||||| |||||||||  || |||||||||||||||||    
T  56114183 cgggctacccgtggcccgttcgggctagccctaacgggtaccgggctttttaggaccgggctaaaaagccct 56114254  T

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Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 278
Target Start/End: Complemental strand, 50097525 - 50097439
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggact 278  Q
    |||||||||||  ||||   |||||||||||  ||||||| | | |||||| ||||||||||||||||||||   ||||||||||||    
T  50097525 cgggctacccgcggcccattcgggctagccctaacgggtaccagacttttaagggccgggctaaaaagcccttttaaaattcggact 50097439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 53724993 - 53724884
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  | |||||  ||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  53724993 cgggctacccgcggcccattcgggctagccctaatgggtactgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 53724895  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  53724894 cccaagcccta 53724884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 53925452 - 53925363
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    |||||||||||  ||||||| |||  ||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  53925452 cgggctagccctaacgggtaccggatttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 53925363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 41361341 - 41361292
Alignment:
Q  249 gggctaaaaagccctggaaaaattcggactgcaattattaggcccaagcc 298  Q
    ||||||||||||||||  ||||| ||| |||||||| |||||||||||||    
T  41361341 gggctaaaaagccctgctaaaatacgggctgcaatttttaggcccaagcc 41361292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 262
Target Start/End: Complemental strand, 32594887 - 32594851
Alignment:
Q  226 cgggtaacgggcttttacgggccgggctaaaaagccc 262  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  32594887 cgggtaacgggctttttcgggccgggctgaaaagccc 32594851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 6e-53; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 15 - 176
Target Start/End: Complemental strand, 7505535 - 7505374
Alignment:
Q  15 tatgttagaatgctagtgttatatcagaggcttttgtgttttttctgctcagtttgagtggtttgaggccattaataatattagttgttnnnnnnnnttg 114  Q
    ||||||||| ||||| || || |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||        ||     
T  7505535 tatgttagattgctactgctacatcagaggcttttgtgttttttctgctcagcttgagtggattgaggccattaataatattagttgttaaaaaaaatta 7505436  T
Q  115 taaaaatgatagaactttaaaagtcatgccttcaaaaccacaccaaacttaacccacttgta 176  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7505435 taaaaatgatagaactttaaaagccatgccttcaaaaccacaccaaacttaacccacttgta 7505374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 31271936 - 31272097
Alignment:
Q  15 tatgttagaatgctagtgttatatcagaggcttttgtgttttttctgctcagtttgagtggtttgaggccattaataatattagttgttnnnnnnnnttg 114  Q
    ||||||||| ||||| || |||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||        ||     
T  31271936 tatgttagattgctactgctatatcagagacttttgtgttttttctgctcagcttgagtggattgaggccattaataatattagctgttaaaaaaattta 31272035  T
Q  115 taaaaatgatagaactttaaaagtcatgccttcaaaaccacaccaaacttaacccacttgta 176  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31272036 taaaaatgatagaactttaaaagccatgccttcaaaaccacaccaaacttaacccacttgta 31272097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 212 - 311
Target Start/End: Complemental strand, 7505357 - 7505258
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattc 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  7505357 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacattttattc 7505258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 230 - 312
Target Start/End: Original strand, 31272123 - 31272205
Alignment:
Q  230 taacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  31272123 taacgtgcttttacgggccgggctaaaaagccctggaaaaattcgtgctgcaattattaggcccaagccctacattttattcg 31272205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 233 - 302
Target Start/End: Original strand, 47381487 - 47381556
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctac 302  Q
    |||||||||  |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  47381487 cgggcttttttgggccgggctaaaaagccctggaaaaattcgggctccaattattaggcccaagccctac 47381556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 33604653 - 33604585
Alignment:
Q  234 gggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctac 302  Q
    |||||||| |||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  33604653 gggctttttcgggtcgggctaaaaagccctggaaaaattcgggctacaattattaggcccaagccctac 33604585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 35710013 - 35709925
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccct 300  Q
    |||||||||||| ||||||  ||||||||| ||||||||||||||||||||||  |||||  || |||||||| |||||||||||||||    
T  35710013 cgggctagcccgaacgggttgcgggctttttcgggccgggctaaaaagccctgataaaatatgggctgcaatttttaggcccaagccct 35709925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 23025309 - 23025182
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  23025309 gggcttccgggcagcccggagcccggacgggctagccctaacgggctaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 23025210  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| |||||||||||||||| |||||||    
T  23025209 attcggcccaagccctacattttattcg 23025182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 312
Target Start/End: Complemental strand, 1873757 - 1873656
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 310  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||    
T  1873757 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttatt 1873658  T
Q  311 cg 312  Q
    ||    
T  1873657 cg 1873656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 39494005 - 39494133
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 283  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | |||||||||| |||||||||||||||||||    ||| ||||| || ||||    
T  39494005 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacaggccgggctaaaaagccctattcaaatttcgggctccaat 39494104  T
Q  284 tattaggcccaagccctacatattattcg 312  Q
    |||| |||||||||||||||| |||||||    
T  39494105 tattcggcccaagccctacattttattcg 39494133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 8613883 - 8613774
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    ||||||||||| |||||   || ||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  8613883 cgggctacccgcagcccattcgagctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 8613785  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  8613784 cccaagcccta 8613774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 47761690 - 47761779
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  47761690 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 47761779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 312
Target Start/End: Complemental strand, 16526309 - 16526208
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 310  Q
    ||||||||||||  |||||  | ||||||||||||||||| ||||||||||||    || ||||| || |||||||| ||| |||||||||||| |||||    
T  16526309 acgggctagccctaacgggccaagggcttttacgggccggactaaaaagccctcttcaatttcgggctccaattattcggctcaagccctacattttatt 16526210  T
Q  311 cg 312  Q
    ||    
T  16526209 cg 16526208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 10993334 - 10993206
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 283  Q
    ||||| ||||||  |||| |||||  ||||||||||||  | |||  | ||||||||||||||||||||||||||||||    ||| ||||  || ||||    
T  10993334 gggcttccgggcagcccggagcccggacgggctagccctaatgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgagctccaat 10993235  T
Q  284 tattaggcccaagccctacatattattcg 312  Q
    |||| |||||||||||||||| |||||||    
T  10993234 tattcggcccaagccctacattttattcg 10993206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 32795844 - 32795773
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  32795844 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 32795773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 34202642 - 34202713
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  34202642 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 34202713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 37471505 - 37471576
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  37471505 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 37471576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 24764321 - 24764212
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  |||| || |||||||||| ||||||||||||||||||||   |||||||||||  |||| | |||||    
T  24764321 cgggctacccgcggcccgttcgggctagccctaacggataccgggcttttaagggccgggctaaaaagccctattaaaattcggac-acaatattttagg 24764223  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  24764222 cccaagcccta 24764212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 39560635 - 39560526
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| || ||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  39560635 cgggctacccgcggcccattcgggctagccctaacgggtaccgagcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 39560537  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  39560536 cccaagcccta 39560526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 30072155 - 30072084
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    ||||||||||| |||||   |||| ||||||  |||||||||||||||| | |||| |||||||||||||||    
T  30072155 cgggctacccgcagcccgttcgggttagccctaacgggtaacgggctttaaagggctgggctaaaaagccct 30072084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 33590275 - 33590330
Alignment:
Q  208 ctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||||||  | ||||| || ||||||| ||||||||||||||||||||    
T  33590275 ctaacgggctagccctaatgggtaccgagcttttaagggccgggctaaaaagccct 33590330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 275
Target Start/End: Complemental strand, 47099284 - 47099201
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcgg 275  Q
    |||||||||||| ||||   |||||||||||  ||||||| | ||  |||| |||||||||||||||||||||  |||||||||    
T  47099284 cgggctacccgtggcccgttcgggctagccctaacgggtaccaggtatttaagggccgggctaaaaagccctgttaaaattcgg 47099201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 217 - 280
Target Start/End: Complemental strand, 49112653 - 49112590
Alignment:
Q  217 tagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgc 280  Q
    ||||||| ||||||   |||||||| |||| ||||||||||||||||| |||||||||| ||||    
T  49112653 tagcccgaacgggttttgggctttttcgggtcgggctaaaaagccctgaaaaaattcgggctgc 49112590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 13598183 - 13598117
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggact 278  Q
    |||||||||||  |||| || |||||||||  ||||||||||||||||||||   ||||||||||||    
T  13598183 cgggctagccctaacggatagcgggctttttagggccgggctaaaaagccctattaaaattcggact 13598117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 275
Target Start/End: Original strand, 17511311 - 17511353
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcgg 275  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||    
T  17511311 cgggctttttcgggccgggctaaaaaaccctgaaaaaattcgg 17511353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 17541903 - 17541861
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcgg 275  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||    
T  17541903 cgggctttttcgggccgggctaaaaaaccctgaaaaaattcgg 17541861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 35710685 - 35710647
Alignment:
Q  225 acgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  35710685 acgggtaacgggctttttagggccgggctaaaaagccct 35710647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 36643449 - 36643395
Alignment:
Q  209 taacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    ||||||||||||||  ||||||| |||||||||  |||||||| |||||||||||    
T  36643449 taacgggctagccctaacgggtaccgggctttttagggccggggtaaaaagccct 36643395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 17475716 - 17475793
Alignment:
Q  203 tagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgc 280  Q
    |||||| |||||||||||||  ||| |   ||||||||| |||| ||||||||||| ||||| |||||||||| ||||    
T  17475716 tagcccgaacgggctagccctaacgagcttcgggctttttcgggtcgggctaaaaaaccctgaaaaaattcgggctgc 17475793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 17577498 - 17577421
Alignment:
Q  203 tagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgc 280  Q
    |||||| |||||||||||||  ||| |   ||||||||| |||| ||||||||||| ||||| |||||||||| ||||    
T  17577498 tagcccgaacgggctagccctaacgagcttcgggctttttcgggtcgggctaaaaaaccctgaaaaaattcgggctgc 17577421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 34182087 - 34182124
Alignment:
Q  226 cgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  34182087 cgggtaccgggcttttaagggccgggctaaaaagccct 34182124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 41200322 - 41200245
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 310  Q
    ||||||||| ||| |||||||||||| ||||| |||||||||| |||| |||  | ||| || ||||||||| |||||    
T  41200322 cgggctttttcggaccgggctaaaaaaccctgaaaaaattcgggctgctatttatcggctcaggccctacattttatt 41200245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 2621446 - 2621526
Alignment:
Q  232 acgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||||  |||||||  ||||| ||| ||  ||||||||| ||||||||||||||| ||| |||||| | |||||||    
T  2621446 acgggcttttttgggccggattaaaaggccttgagaaaattcgggctgcaattattaggctcaaaccctacgttttattcg 2621526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 31271507 - 31271547
Alignment:
Q  219 gcccggacgggtaacgggcttttacgggccgggctaaaaag 259  Q
    ||||| ||||||| ||||||||| |||||||||||||||||    
T  31271507 gcccgaacgggtagcgggctttttcgggccgggctaaaaag 31271547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 27966567 - 27966722
Alignment:
Q  15 tatgttagaatgctagtgttatatcagaggcttttgtgttttttctgctcagtttgagtggtttgaggccattaataatattagttgttnnnnnnnnttg 114  Q
    ||||||||| ||||| || |||||||||||||||||||||      |||||| |||||||| |||||||||||||||||||||||||||        |||    
T  27966567 tatgttagattgctactgctatatcagaggcttttgtgtt------gctcagcttgagtggattgaggccattaataatattagttgttaaaaaaaattg 27966660  T
Q  115 taaaaatgatagaactttaaaagtcatgccttcaaaaccacaccaaacttaacccacttgta 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27966661 taaaaatgatagaactttaaaagtcatgccttcaaaaccacaccaaacttaacccacttgta 27966722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 212 - 304
Target Start/End: Original strand, 27966740 - 27966832
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacat 304  Q
    |||||||||  |||||||||| ||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  27966740 cgggctagcatggacgggtaatgggcttttatgggccgggctaaaaagccctggaaaaatttgggctgcaattattaggcccaagccctacat 27966832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 20139313 - 20139234
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||    
T  20139313 cgggctttttcgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacgttttattcg 20139234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 22193556 - 22193635
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||    
T  22193556 cgggctttttcgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacgttttattcg 22193635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 31472452 - 31472575
Alignment:
Q  189 tgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattatta 288  Q
    ||||||||| ||||| |||| ||||||||||||   |||||   | ||||||| |||||| |||||||||||||| ||||||||||| ||||||||||||    
T  31472452 tgccgggctgcccgtggcccgaacgggctagccataacgggctcctggctttttcgggcctggctaaaaagccctagaaaaattcgggctgcaattatta 31472551  T
Q  289 ggcccaagccctacatattattcg 312  Q
    |||||||||||||| | |||||||    
T  31472552 ggcccaagccctacgttttattcg 31472575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 312
Target Start/End: Complemental strand, 15066048 - 15065947
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 310  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||    
T  15066048 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttatt 15065949  T
Q  311 cg 312  Q
    ||    
T  15065948 cg 15065947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 2067274 - 2067165
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  2067274 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 2067176  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  2067175 cccaagcccta 2067165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 10997838 - 10997760
Alignment:
Q  234 gggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||| ||| |||||||    
T  10997838 gggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctccattttattcg 10997760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 3044368 - 3044299
Alignment:
Q  243 cgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    |||||||||||||||| ||||| |||||||||| |||| |||||| |||||| ||||| ||| |||||||    
T  3044368 cgggccgggctaaaaaaccctgaaaaaattcgggctgctattattcggcccaggccctgcattttattcg 3044299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 12272226 - 12272295
Alignment:
Q  243 cgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    |||||||||||||||||||||| |||||||||| |||| |||  | |||||| ||||||||| |||||||    
T  12272226 cgggccgggctaaaaagccctgaaaaaattcgggctgctatttatcggcccaggccctacattttattcg 12272295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 17869230 - 17869339
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 291  Q
    |||||| ||| |||||| | ||||| |||||  | ||||  ||||||||| |||||||||||||||| ||||| |||||||||| ||| |||| ||  ||    
T  17869230 cgggctgcccttagcccgagcgggccagcccaaatgggttgcgggctttttcgggccgggctaaaaaaccctgaaaaaattcgggctggaattttttagc 17869329  T
Q  292 ccaagcccta 301  Q
    ||||||||||    
T  17869330 ccaagcccta 17869339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 22988151 - 22988222
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  22988151 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 22988222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 23800245 - 23800174
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  23800245 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 23800174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 2702977 - 2703086
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  |||||||  ||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  2702977 cgggctacccgcggcccattcgggctagccctaacgggtactgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 2703075  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  2703076 cccaagcccta 2703086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 312
Target Start/End: Original strand, 11369564 - 11369666
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaattattaggcccaagccctacatattat 309  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || |||||||| ||||||| | |||||| ||||    
T  11369564 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctctttaaatttcgggctccaattattcggcccaaactctacattttat 11369663  T
Q  310 tcg 312  Q
    |||    
T  11369664 tcg 11369666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 26555218 - 26555307
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    ||||||| |||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  26555218 cgggctaaccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 26555307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 29641046 - 29641135
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    |||| ||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  29641046 cgggatagccctaacgggtatcgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 29641135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 4170937 - 4170986
Alignment:
Q  214 ggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  4170937 ggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 4170986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 31511238 - 31511314
Alignment:
Q  225 acgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  31511238 acgggtatcgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 31511314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 276
Target Start/End: Complemental strand, 13836031 - 13835967
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcgga 276  Q
    |||||||||||  ||||||| |||||||||  ||||||||||||||||||||   ||||||||||    
T  13836031 cgggctagccctaacgggtatcgggctttttagggccgggctaaaaagccctacgaaaattcgga 13835967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 304
Target Start/End: Original strand, 32465657 - 32465729
Alignment:
Q  233 cgggcttttacgggccggg-ctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacat 304  Q
    ||||||||||||||||||| | |||||||||||   ||||||||  ||| ||| |||||||||||||||||||    
T  32465657 cgggcttttacgggccgggtcaaaaaagccctgtttaaattcgggttgccatttttaggcccaagccctacat 32465729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 17547608 - 17547561
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaag 259  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||    
T  17547608 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaag 17547561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 218 - 301
Target Start/End: Original strand, 31655523 - 31655606
Alignment:
Q  218 agcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagcccta 301  Q
    |||||| ||||| ||||||||||| ||| |||||||||||||||| | |   |||||| ||| |||| |||||||||| |||||    
T  31655523 agcccgaacgggcaacgggctttttcggaccgggctaaaaagcccggaatttattcgggctgtaatttttaggcccaaacccta 31655606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 9035080 - 9035189
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||| ||||||  ||||||| |||||||||| |||||| |||||||||||||   ||||||||| || |||| | |||||    
T  9035080 cgggctacccgcggcccattcgggatagccctaacgggtaccgggcttttaagggccgtgctaaaaagccctattaaaattcgggct-caatattttagg 9035178  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  9035179 cccaagcccta 9035189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 15068034 - 15068072
Alignment:
Q  225 acgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  15068034 acgggtaccgggcttttaagggccgggctaaaaagccct 15068072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 15183747 - 15183836
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    |||||||||||  ||||| | ||||||||||  |||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  15183747 cgggctagccctaacgggaaccgggcttttaaaggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 15183836  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 17879033 - 17879091
Alignment:
Q  243 cgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagcccta 301  Q
    |||||| ||||||||||||||| |||||||||| ||| |||| ||  ||||||||||||    
T  17879033 cgggccaggctaaaaagccctgaaaaaattcgggctggaattttttagcccaagcccta 17879091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 192 - 312
Target Start/End: Original strand, 15614122 - 15614242
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 291  Q
    |||||| ||||| |||| |||||||||||||  || ||   ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||    
T  15614122 cgggctgcccgtggcccgaacgggctagccctaacaggctccgggctttttcggggcgggctaaaaagccctggaaaaattcgggctgcaattattaggc 15614221  T
Q  292 ccaagccctacatattattcg 312  Q
    |||||||||| || |||||||    
T  15614222 ccaagccctatattttattcg 15614242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 38838004 - 38838131
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||||||||||||||||| ||||  |||||  ||||||| ||||  ||||||||||| ||| |||||||| ||||| |  |||||||||||||||||||    
T  38838004 gggctgccgggctacccgtggcccgtacgggtaagcccggtcgggctacgggcttttatgggtcgggctaacaagccttaaaaaaattcggactgcaatt 38838103  T
Q  285 attaggcccaagccctacatattattcg 312  Q
     ||||||||||||||||| | |||||||    
T  38838104 tttaggcccaagccctacgttttattcg 38838131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 5271179 - 5271092
Alignment:
Q  225 acgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    |||||| ||||| |||| ||||||||||||||||| ||||||||||||||| || ||||| || |||||||||||| ||| |||||||    
T  5271179 acgggttacggggttttgcgggccgggctaaaaagtcctggaaaaattcgggctccaatttttcggcccaagccctgcattttattcg 5271092  T

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Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 15560532 - 15560659
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  15560532 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 15560631  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| |||||||||||||||| |||||||    
T  15560632 attcggcccaagccctacattttattcg 15560659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 313
Target Start/End: Complemental strand, 4565057 - 4564937
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 291  Q
    |||||| ||||| |||| |||||| |||||| ||||||  |||||||||| ||||  ||| |||||| | |||||||| ||||| |||||||| ||||||    
T  4565057 cgggctgcccgtggcccaaacgggttagccctgacgggctacgggctttttcgggttgggttaaaaa-ctctggaaaatttcgggctgcaatttttaggc 4564959  T
Q  292 ccaagccctacatattattcga 313  Q
     |||||||||||| ||||||||    
T  4564958 acaagccctacattttattcga 4564937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 312
Target Start/End: Complemental strand, 25096424 - 25096324
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattc 311  Q
    |||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| ||||||    
T  25096424 cgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattc 25096325  T
Q  312 g 312  Q
    |    
T  25096324 g 25096324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 312
Target Start/End: Original strand, 42730728 - 42730807
Alignment:
Q  232 acgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    |||||||||| |||| ||||||||||||||||| |||||||||| |||| |||||| |||||||||||| ||| |||||||    
T  42730728 acgggctttt-cgggtcgggctaaaaagccctgaaaaaattcgggctgctattattcggcccaagccctgcattttattcg 42730807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 20922773 - 20922828
Alignment:
Q  232 acgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattatt 287  Q
    |||||||||| |||||||||||||||||||||| |||||||||| |||||||||||    
T  20922773 acgggctttttcgggccgggctaaaaagccctgaaaaaattcgggctgcaattatt 20922828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 29201372 - 29201499
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  |||| |||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  29201372 gggcttccgggcagcccggagcccggacggtctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 29201471  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| |||||||||||||||| |||||||    
T  29201472 attcggcccaagccctacattttattcg 29201499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 21747515 - 21747437
Alignment:
Q  234 gggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||||    
T  21747515 gggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcg 21747437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 9470923 - 9470844
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    |||| |||| |||||||||||||||||||||| |||||||||| |||| |||  | ||||||| |||||||| |||||||    
T  9470923 cgggatttttcgggccgggctaaaaagccctgaaaaaattcgggctgctatttatcggcccaaaccctacattttattcg 9470844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 40000753 - 40000879
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| |  |||||    
T  40000753 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggc-ccaatt 40000851  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| |||||||||||||||| |||||||    
T  40000852 attcggcccaagccctacattttattcg 40000879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 40861001 - 40861128
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||| ||||||||||||||    || ||||| || |||||    
T  40861001 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccaggctaaaaagccctcttcaatttcgggctccaatt 40861100  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| ||| |||||||||||| |||||||    
T  40861101 attcggctcaagccctacattttattcg 40861128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 304
Target Start/End: Original strand, 26556474 - 26556568
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaattattaggcccaagccctacat 304  Q
    ||||||||||||  |||||| | | | ||||||||||||||||||||||||||    ||||||||  ||||||||||| ||||||||||||||||    
T  26556474 acgggctagccctaacgggttatgagtttttacgggccgggctaaaaagccctcttcaaaattcgagctgcaattattcggcccaagccctacat 26556568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 27496012 - 27495903
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  27496012 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 27495914  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  27495913 cccaagcccta 27495903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 1002507 - 1002558
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  1002507 cgggctagccctaacgggtaccgggcttttatgggccgggctaaaaagccct 1002558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 1346260 - 1346369
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| ||| |||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  1346260 cgggctacccgcggcccattcgggctagccctaacgggtaccggacttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 1346358  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  1346359 cccaagcccta 1346369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 2650090 - 2650179
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    |||||||||||  ||||||| |||||||||| || |||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  2650090 cgggctagccctaacgggtaccgggcttttaaggaccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 2650179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 311
Target Start/End: Complemental strand, 17920886 - 17920808
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattc 311  Q
    ||||||||| |||||||||||||||||||||  |||||||| | |||| |||  | ||||||| |||||||| ||||||    
T  17920886 cgggctttttcgggccgggctaaaaagccctaaaaaaattcaggctgctatttatcggcccaaaccctacattttattc 17920808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 35439538 - 35439627
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    |||||| ||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  35439538 cgggcttgccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 35439627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 13247835 - 13247786
Alignment:
Q  214 ggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  13247835 ggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 13247786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 30801211 - 30801259
Alignment:
Q  215 gctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    ||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  30801211 gctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 30801259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 28223022 - 28222971
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||||| |||||||||| | ||||||||||||||||||    
T  28223022 cgggctagccctaacgggtaccgggcttttaagagccgggctaaaaagccct 28222971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 36240734 - 36240805
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||| ||||||||||||||||    
T  36240734 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggtcgggctaaaaagccct 36240805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 10261438 - 10261329
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||| | ||||||||||||||   ||||||||| || |||| | |||||    
T  10261438 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggtcaggctaaaaagccctattaaaattcgggct-caatattttagg 10261340  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  10261339 cccaagcccta 10261329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 10440269 - 10440160
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  || |||| |||||||||| ||| ||||||||||||||||   ||||||||| || |||| | |||||    
T  10440269 cgggctacccgcggcccattcgggctagccctaacaggtaccgggcttttaagggtcgggctaaaaagccctattaaaattcgggct-caatattttagg 10440171  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  10440170 cccaagcccta 10440160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 17071256 - 17071306
Alignment:
Q  262 ctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    |||||||||||||| ||| |||||||| |||||| |||||||| |||||||    
T  17071256 ctggaaaaattcgggctgaaattattaagcccaaaccctacattttattcg 17071306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 17077328 - 17077378
Alignment:
Q  262 ctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    |||||||||||||| ||| |||||||| |||||| |||||||| |||||||    
T  17077328 ctggaaaaattcgggctgaaattattaagcccaaaccctacattttattcg 17077378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 31743008 - 31742899
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  | ||||| |||||||||| ||||||||||||||||| ||   ||||||||| || |||| | |||||    
T  31743008 cgggctacccgcggcccattcgggctagccctaatgggtaccgggcttttaagggccgggctaaaaagctctattaaaattcgggct-caatattttagg 31742910  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  31742909 cccaagcccta 31742899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 42730064 - 42730102
Alignment:
Q  226 cgggtaacgggcttttacgggccgggctaaaaagccctg 264  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  42730064 cgggtaacgggcttttaagggccgggctgaaaagccctg 42730102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 18258065 - 18258118
Alignment:
Q  225 acgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggact 278  Q
    ||||||| |||||||||| |||||||| |||||||||||   ||||||||||||    
T  18258065 acgggtaccgggcttttaagggccggggtaaaaagccctattaaaattcggact 18258118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 6e-28; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 38976205 - 38976332
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||||||||||  ||||| |||| || ||||||||||  |||||  |||||||||| ||||||||||||||||||| | | ||||||||| ||||||||    
T  38976205 gggctgccgggccgcccgtggcccaaatgggctagccctaacgggctacgggctttttcgggccgggctaaaaagcctttggaaaattcgggctgcaatt 38976304  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    |||||||||||||||||| | |||||||    
T  38976305 attaggcccaagccctacgttttattcg 38976332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 37205995 - 37206122
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||||||||||||||||| ||||  |||||  ||||||| ||||  |||||||||||||||||| |||||||||||||  ||||| ||||  |||||||    
T  37205995 gggctgccgggctacccgtggcccgtacgggtaagcccggtcgggctacgggcttttacgggccgagctaaaaagccctaaaaaaaatcgggttgcaatt 37206094  T
Q  285 attaggcccaagccctacatattattcg 312  Q
     ||||||||||||||||| | |||||||    
T  37206095 tttaggcccaagccctacgttttattcg 37206122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 33908117 - 33908200
Alignment:
Q  217 tagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccct 300  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||| || ||||| || |||||| |||||    
T  33908117 tagcccgaacgggttacgggcttttacgggccgggctaaaaagccctagaaaaattcgggctccaatttttcggcccaggccct 33908200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 201 - 275
Target Start/End: Complemental strand, 31230384 - 31230310
Alignment:
Q  201 cgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcgg 275  Q
    |||||||| |||||||| ||||| || ||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  31230384 cgtagcccgaacgggctggcccgaactggttacgggattttacgggccgggctaaaaagccctggaaaaattcgg 31230310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 204 - 312
Target Start/End: Original strand, 35038728 - 35038836
Alignment:
Q  204 agccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctaca 303  Q
    ||||| |||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||    
T  35038728 agcccgaacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctaca 35038827  T
Q  304 tattattcg 312  Q
    | |||||||    
T  35038828 ttttattcg 35038836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 6955748 - 6955875
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  6955748 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 6955847  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| |||||||||||||||| |||||||    
T  6955848 attcggcccaagccctacattttattcg 6955875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 9996387 - 9996260
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  9996387 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 9996288  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| |||||||||||||||| |||||||    
T  9996287 attcggcccaagccctacattttattcg 9996260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 38355982 - 38356109
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  38355982 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 38356081  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| |||||||||||||||| |||||||    
T  38356082 attcggcccaagccctacattttattcg 38356109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 312
Target Start/End: Complemental strand, 21731835 - 21731734
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 310  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||    
T  21731835 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttatt 21731736  T
Q  311 cg 312  Q
    ||    
T  21731735 cg 21731734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 6238330 - 6238202
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 283  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  6238330 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaat 6238231  T
Q  284 tattaggcccaagccctacatattattcg 312  Q
    |||| |||||||||||||||| |||||||    
T  6238230 tattcggcccaagccctacattttattcg 6238202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 6900040 - 6899912
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 283  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  6900040 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaat 6899941  T
Q  284 tattaggcccaagccctacatattattcg 312  Q
    |||| |||||||||||||||| |||||||    
T  6899940 tattcggcccaagccctacattttattcg 6899912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 35838255 - 35838127
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 283  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  35838255 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctattcaaatttcgggctccaat 35838156  T
Q  284 tattaggcccaagccctacatattattcg 312  Q
    |||| |||||||||||||||| |||||||    
T  35838155 tattcggcccaagccctacattttattcg 35838127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 312
Target Start/End: Complemental strand, 36016392 - 36016291
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 310  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || || || || |||||||| |||||||||||||||| |||||    
T  36016392 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaattttgggctccaattattcggcccaagccctacattttatt 36016293  T
Q  311 cg 312  Q
    ||    
T  36016292 cg 36016291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 36866236 - 36866135
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattc 311  Q
    |||||||||||| | | || ||||||||||||||| |||| |||||||||||| |||||||||| ||||| ||||| | ||||| | |||| | ||||||    
T  36866236 cgggctagcccgaatgagttacgggcttttacgggtcgggataaaaagccctgaaaaaattcgggctgcacttattcgacccaaactctacgttttattc 36866137  T
Q  312 ga 313  Q
    ||    
T  36866136 ga 36866135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 312
Target Start/End: Original strand, 10642053 - 10642129
Alignment:
Q  236 gcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||||    
T  10642053 gcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcg 10642129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 24477431 - 24477303
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 283  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  24477431 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaat 24477332  T
Q  284 tattaggcccaagccctacatattattcg 312  Q
    |||| ||| |||||||||||| |||||||    
T  24477331 tattcggctcaagccctacattttattcg 24477303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 38986610 - 38986678
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagcccta 301  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| ||| |||| ||  ||||||||||||    
T  38986610 cgggctttttcgggccgggctaaaaagccctagaaaaattcgggctgaaatttttgagcccaagcccta 38986678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 313
Target Start/End: Complemental strand, 6453133 - 6453030
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaattattaggcccaagccctacatattat 309  Q
    ||||| ||||||  |||||| ||||| ||||||||| ||||||||||||||||    ||||||||| ||||||||||| ||| ||| |||||||| ||||    
T  6453133 acgggttagccctaacgggttacgggtttttacgggtcgggctaaaaagccctcttcaaaattcgggctgcaattattcggcacaaaccctacattttat 6453034  T
Q  310 tcga 313  Q
    ||||    
T  6453033 tcga 6453030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 312
Target Start/End: Original strand, 4699912 - 4700014
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaattattaggcccaagccctacatattat 309  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || |||||||| ||||||| |||||||| ||||    
T  4699912 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctattcaaatttcgggctccaattattcggcccaaaccctacattttat 4700011  T
Q  310 tcg 312  Q
    |||    
T  4700012 tcg 4700014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 26264372 - 26264481
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatta-ttagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  26264372 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caataatttagg 26264470  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  26264471 cccaagcccta 26264481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 28759352 - 28759461
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  28759352 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 28759450  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  28759451 cccaagcccta 28759461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 20122815 - 20122764
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  20122815 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 20122764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 312
Target Start/End: Original strand, 20338469 - 20338592
Alignment:
Q  189 tgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattatta 288  Q
    ||||||||| ||| ||| || |||||||||||||  ||| |   ||||||||| ||| |||||||||||| ||||| |||||||||| |||| |||  |     
T  20338469 tgccgggctgcccttagtccgaacgggctagccctaacgagcttcgggctttttcggaccgggctaaaaatccctgaaaaaattcgggctgctatttatc 20338568  T
Q  289 ggcccaagccctacatattattcg 312  Q
    |||| | ||||||||| |||||||    
T  20338569 ggcctaggccctacattttattcg 20338592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 42860272 - 42860399
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | |||||||||||||| |||||||||| ||||    || ||||| || |||||    
T  42860272 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggctgggctaaaaaaccctcttcaatttcgggctccaatt 42860371  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| ||||||| |||||||| |||||||    
T  42860372 attcggcccaaaccctacattttattcg 42860399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 2466308 - 2466397
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    ||||||||||   ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  2466308 cgggctagccataacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 2466397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 4975760 - 4975870
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 291  Q
    |||||| ||||| |||| || ||||||||||  ||||    ||||||||| ||| ||||||||||||| | | ||||||||||  || ||||||||||||    
T  4975760 cgggctgcccgtggcccgaatgggctagccctaacggactccgggctttttcggaccgggctaaaaagtcttagaaaaattcgagctacaattattaggc 4975859  T
Q  292 ccaagccctac 302  Q
    |||| ||||||    
T  4975860 ccaaaccctac 4975870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 302
Target Start/End: Original strand, 1398370 - 1398434
Alignment:
Q  238 ttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctac 302  Q
    ||||||||||||||| ||||||||||    |||||||| |||| ||| |||||||||||||||||    
T  1398370 ttttacgggccgggccaaaaagccctatttaaattcgggctgccatttttaggcccaagccctac 1398434  T

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Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 1845540 - 1845488
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    
T  1845540 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccct 1845488  T

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Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 3296217 - 3296166
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    |||||||||  ||||||||||||||||||||| || ||||||| ||||||||    
T  3296217 cgggcttttttgggccgggctaaaaagccctgaaacaattcgggctgcaatt 3296166  T

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Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 7949708 - 7949779
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||| ||||    
T  7949708 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccct 7949779  T

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Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 16749082 - 16749011
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||| ||||||||||    
T  16749082 cgggctacccgcggcccattcgggctagccctaacgggtatcgggcttttaagggccgggcaaaaaagccct 16749011  T

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Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 17320497 - 17320426
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  17320497 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggctttttagggccgggctaaaaagccct 17320426  T

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Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 4971315 - 4971357
Alignment:
Q  112 ttgtaaaaatgatagaactttaaaagtcatgccttcaaaacca 154  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||    
T  4971315 ttgtaaaaatgatagaactataaaaatcataccttcaaaacca 4971357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 19646960 - 19647010
Alignment:
Q  213 gggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    ||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  19646960 gggctagccctaacgggtagcgggctttttagggccgggctaaaaagccct 19647010  T

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Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 26507331 - 26507293
Alignment:
Q  225 acgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  26507331 acgggtaccgggcttttaagggccgggctaaaaagccct 26507293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 39479473 - 39479404
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagcc 261  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||  ||||||||||||||||||    
T  39479473 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggctttttagggccgggctaaaaagcc 39479404  T

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Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 42739369 - 42739448
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    |||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||    
T  42739369 cgggcttttttgggccgggctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctacgttttattcg 42739448  T

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Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 6143035 - 6142935
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 291  Q
    |||||| ||| |||||| |||||||||| ||| | |||| ||||| |||||||||||||||||||||||||||||| ||| ||| ||||||||||| |||    
T  6143035 cgggctgcccttagcccaaacgggctagtccgaaagggttacgggtttttacgggccgggctaaaaagccctggaagaatccgggctgcaattattcggc 6142936  T
Q  292 c 292  Q
    |    
T  6142935 c 6142935  T

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Target: chr8; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 185 - 304
Target Start/End: Complemental strand, 15243920 - 15243801
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    |||||| |||||| ||| ||||||   |||||||||||  |||||  ||||||||| |||| |||||||||||||||||| || ||||||| ||||||||    
T  15243920 gggctggcgggctgcccttagcccgtgcgggctagcccaaacgggctacgggctttaacggtccgggctaaaaagccctgaaagaattcgggctgcaatt 15243821  T
Q  285 attaggcccaagccctacat 304  Q
    ||| |||||| |||||||||    
T  15243820 attcggcccaggccctacat 15243801  T

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Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 2349792 - 2349713
Alignment:
Q  232 acgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||||  ||||||||||||||||||||| |||||||||  ||||||||||| |||||| ||||||||| |||||||    
T  2349792 acgggcttttttgggccgggctaaaaagccctg-aaaaattcgagctgcaattattcggcccaggccctacattttattcg 2349713  T

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Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 30436423 - 30436551
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 283  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  30436423 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaat 30436522  T
Q  284 tattaggcccaagccctacatattattcg 312  Q
    |||| |||||||||||||||| |||||||    
T  30436523 tattcggcccaagccctacattttattcg 30436551  T

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Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 35813392 - 35813520
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 283  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  35813392 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaaatttcgggctccaat 35813491  T
Q  284 tattaggcccaagccctacatattattcg 312  Q
    |||| |||||||||||||||| |||||||    
T  35813492 tattcggcccaagccctacattttattcg 35813520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 235 - 312
Target Start/End: Complemental strand, 3940767 - 3940690
Alignment:
Q  235 ggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    |||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||||    
T  3940767 ggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcg 3940690  T

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Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 45451728 - 45451856
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 283  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||| ||||| ||||||| |||||||||||||| |||    ||||||||  |||||||    
T  45451728 gggcttccgggcggcccgaagcccggacgggctagccctaacgggttacgggtttttacgagccgggctaaaaagtcctcttcaaaattcgagctgcaat 45451827  T
Q  284 tattaggcccaagccctacatattattcg 312  Q
    |||| ||| |||||||||||| |||||||    
T  45451828 tattcggctcaagccctacattttattcg 45451856  T

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Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 3654264 - 3654391
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  ||| |  | |||||||||||||||| |||||||||||||    || ||||| || |||||    
T  3654264 gggcttccgggcagcccgaagcccggacgggctagccctaacgagccaagggcttttacgggccgagctaaaaagccctcttcaatttcgggctccaatt 3654363  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| |||||||||||||||| |||||||    
T  3654364 attcggcccaagccctacattttattcg 3654391  T

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Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 312
Target Start/End: Complemental strand, 9201224 - 9201129
Alignment:
Q  217 tagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||| | |||| ||||||||||| || |||||||||||||| ||| || ||||| | ||||||||||| ||||||| |||||| | |||||||    
T  9201224 tagcccgaaagggttacgggcttttatggaccgggctaaaaagctctgaaagaattcaggctgcaattattcggcccaaaccctacgttttattcg 9201129  T

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Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 5927209 - 5927100
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  5927209 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 5927111  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  5927110 cccaagcccta 5927100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 6266402 - 6266293
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  6266402 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 6266304  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  6266303 cccaagcccta 6266293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 15041446 - 15041357
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  15041446 cgggctagccctaacgggtatcgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatatcttaggcccaagcccta 15041357  T

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Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 24101755 - 24101844
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  24101755 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 24101844  T

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Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 26098384 - 26098295
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  26098384 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 26098295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 38231735 - 38231824
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  38231735 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 38231824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 31894922 - 31895030
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 291  Q
    |||||||||||  ||||   |||| ||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || ||||  ||||||    
T  31894922 cgggctacccgcggcccattcgggttagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatatttaggc 31895020  T
Q  292 ccaagcccta 301  Q
    ||||||||||    
T  31895021 ccaagcccta 31895030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 28968293 - 28968213
Alignment:
Q  232 acgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||||  ||||||||||||||||||||| |||||||| | || | |||||| |||||| ||||| ||| |||||||    
T  28968293 acgggcttttttgggccgggctaaaaagccctgaaaaaattcaggcttctattattcggcccaggccctgcattttattcg 28968213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 11202169 - 11202240
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  11202169 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 11202240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 37819322 - 37819271
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  37819322 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 37819271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 40027852 - 40027766
Alignment:
Q  215 gctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    ||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  40027852 gctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 40027766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 7161681 - 7161592
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    |||||||||||  ||||||| |||||||||| ||| ||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  7161681 cgggctagccctaacgggtaccgggcttttaagggacgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 7161592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 41644164 - 41644273
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    ||||||||||| |||||   |||| ||||||  ||||||| |||||||||| |||||||||||||||| |||   ||||||||| || |||| | |||||    
T  41644164 cgggctacccgcagcccattcgggttagccctaacgggtaccgggcttttaagggccgggctaaaaaggcctattaaaattcgggct-caatattttagg 41644262  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  41644263 cccaagcccta 41644273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 41827541 - 41827650
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   ||||||||||   ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  41827541 cgggctacccgcggcccattcgggctagccttaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 41827639  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  41827640 cccaagcccta 41827650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 5913409 - 5913354
Alignment:
Q  208 ctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||||||  ||||||| |||||||||  |||||| |||||||||||||    
T  5913409 ctaacgggctagccctaacgggtatcgggctttttagggccgagctaaaaagccct 5913354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 7433517 - 7433431
Alignment:
Q  215 gctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    ||||||||  ||||||  |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  7433517 gctagccctaacgggtgccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 7433431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 27640026 - 27640077
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  |||| || |||||||||| ||||||||||||||||||||    
T  27640026 cgggctagccctaacggataccgggcttttaagggccgggctaaaaagccct 27640077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 24476390 - 24476440
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccc 262  Q
    |||||||||||  ||||||| ||||| |||| |||||||||||||||||||    
T  24476390 cgggctagccctaacgggtaccgggcatttaagggccgggctaaaaagccc 24476440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 41395942 - 41395833
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| ||| |||||| ||| ||||||||||||||||   ||||||||| || |||| | |||||    
T  41395942 cgggctacccgcggcccattcgggctagccctaacgggtaccggacttttaagggtcgggctaaaaagccctattaaaattcgggct-caatattttagg 41395844  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  41395843 cccaagcccta 41395833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Original strand, 44679165 - 44679214
Alignment:
Q  214 ggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||  ||||||| |||||||||| || |||||||||||||||||    
T  44679165 ggctagccctaacgggtaccgggcttttaaggaccgggctaaaaagccct 44679214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 46237603 - 46237682
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  46237603 cgggctttttcgggccgagctaaaaagccctggaaaaattcgggctgcaattattaggcccaagccctatattttattcg 46237682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 185 - 301
Target Start/End: Original strand, 31489462 - 31489578
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    |||||||||||||||||| ||||| |||||||||||||  ||||||||||||| ||| ||||||||| |||||||||| | |   |||||| ||| ||||    
T  31489462 gggctgccgggctacccgaagcccgaacgggctagccctaacgggtaacgggccttttcgggccgggttaaaaagcccggaatttattcgggctgtaatt 31489561  T
Q  285 attaggcccaagcccta 301  Q
     ||||||||||||||||    
T  31489562 tttaggcccaagcccta 31489578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 9660784 - 9660911
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||    
T  9660784 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaatt 9660883  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| |||||||||||||||| |||||||    
T  9660884 attcggcccaagccctacattttattcg 9660911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 32057669 - 32057588
Alignment:
Q  219 gcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccct 300  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||| ||||||||||| || ||||| || |||||| |||||    
T  32057669 gcccgaacgggttacgggcttttacggaccgggctaaaaagccctagaaaaattcgggctccaatttttcggcccaggccct 32057588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 12745725 - 12745597
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 283  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  12745725 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctattcaaatttcgggctccaat 12745626  T
Q  284 tattaggcccaagccctacatattattcg 312  Q
    |||| |||||||||||||||| |||||||    
T  12745625 tattcggcccaagccctacattttattcg 12745597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 312
Target Start/End: Complemental strand, 12756714 - 12756586
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct-ggaaaaattcggactgcaat 283  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    ||| ||||| || ||||    
T  12756714 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctattcaaatttcgggctccaat 12756615  T
Q  284 tattaggcccaagccctacatattattcg 312  Q
    |||| |||||||||||||||| |||||||    
T  12756614 tattcggcccaagccctacattttattcg 12756586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 312
Target Start/End: Complemental strand, 33189145 - 33189046
Alignment:
Q  213 gggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||||    
T  33189145 gggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttattcg 33189046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 42763210 - 42763337
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | |||||||||||| |||||||||||||||||    || ||||| || |||||    
T  42763210 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacggaccgggctaaaaagccctcttcaatttcgggcttcaatt 42763309  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| |||||||||||||||| |||||||    
T  42763310 attcggcccaagccctacattttattcg 42763337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 312
Target Start/End: Original strand, 43781128 - 43781255
Alignment:
Q  185 gggctgccgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaatt 284  Q
    ||||| ||||||  |||| |||||  ||||||||||||  |||||  | ||||||||||||||||||||||||| ||||    || ||||| || |||||    
T  43781128 gggcttccgggcagcccggagcccggacgggctagccctaacgggccaagggcttttacgggccgggctaaaaaaccctcttcaatttcgggctccaatt 43781227  T
Q  285 attaggcccaagccctacatattattcg 312  Q
    ||| |||||||||||||||| |||||||    
T  43781228 attcggcccaagccctacattttattcg 43781255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 312
Target Start/End: Original strand, 45757225 - 45757326
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 310  Q
    ||||||||||||  |||||  | ||||||||| ||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||    
T  45757225 acgggctagccctaacgggccaagggcttttatgggccgggctaaaaagccctcttcaatttcgggctccaattattcggcccaagccctacattttatt 45757324  T
Q  311 cg 312  Q
    ||    
T  45757325 cg 45757326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 5115035 - 5114926
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggc 291  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| ||  |  | ||||||    
T  5115035 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggcttaatattttaggc 5114936  T
Q  292 ccaagcccta 301  Q
    ||||||||||    
T  5114935 ccaagcccta 5114926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 301
Target Start/End: Complemental strand, 19406753 - 19406667
Alignment:
Q  215 gctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    ||||||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  19406753 gctagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 19406667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 39995470 - 39995521
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  39995470 cgggctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 39995521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 275
Target Start/End: Complemental strand, 45039118 - 45039035
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcgg 275  Q
    |||||| ||| |||||| | ||||| |||||  ||||||  ||||||||| |||| ||||||||||| ||||||||||||||||    
T  45039118 cgggctgcccttagcccgagcgggccagcccaaacgggttgcgggctttttcgggtcgggctaaaaaaccctggaaaaattcgg 45039035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 48470436 - 48470515
Alignment:
Q  233 cgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| |||| |||  | ||||||  |||||||| |||||||    
T  48470436 cgggctttttcgggccgggctaaaaagtcctgaaaaaattcgggctgctatttatcggcccagaccctacattttattcg 48470515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 301
Target Start/End: Original strand, 1858786 - 1858875
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    ||||| |||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  1858786 cgggccagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 1858875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 24683447 - 24683489
Alignment:
Q  112 ttgtaaaaatgatagaactttaaaagtcatgccttcaaaacca 154  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  24683447 ttgtaaaaatgatagaactttaaaaatcataccttcaaaacca 24683489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Complemental strand, 30723430 - 30723321
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||||| ||||   ||||||||| || |||| | |||||    
T  30723430 cgggctacccgcggcccgttcgggctagccctaacgggtaccgggcttttaagggccgggctaaaaaaccctattaaaattcgggct-caatattttagg 30723332  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  30723331 cccaagcccta 30723321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 41310519 - 41310628
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||  |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  41310519 cgggctacccgcggcccattcgggctagccctaacgggtgccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 41310617  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  41310618 cccaagcccta 41310628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 48812530 - 48812639
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||| ||||||||||||||||   ||||||||| || |||| | |||||    
T  48812530 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggtcgggctaaaaagccctattaaaattcgggct-caatattttagg 48812628  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  48812629 cccaagcccta 48812639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 263
Target Start/End: Complemental strand, 28199324 - 28199276
Alignment:
Q  215 gctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    ||||||||  ||||||| |||||||||| ||||||||||||||||||||    
T  28199324 gctagccctaacgggtaccgggcttttaagggccgggctaaaaagccct 28199276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 15699330 - 15699389
Alignment:
Q  243 cgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctac 302  Q
    |||||||||| |||||||||||   |||||||| |||| ||| |||||||||||||||||    
T  15699330 cgggccgggccaaaaagccctgtttaaattcgggctgccatttttaggcccaagccctac 15699389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 275
Target Start/End: Original strand, 21088540 - 21088603
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcgg 275  Q
    |||||||||||  ||||||| ||||||||||  ||||||||||||||| ||||  |||||||||    
T  21088540 cgggctagccctaacgggtaccgggcttttaaaggccgggctaaaaaggcctgttaaaattcgg 21088603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 44922301 - 44922250
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  44922301 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccct 44922250  T

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Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 48913710 - 48913639
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| ||| |||||| ||||||||||||||||||||    
T  48913710 cgggctacccgcggcccattcgggctagccctaacgggtaccggacttttaagggccgggctaaaaagccct 48913639  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 50511991 - 50512042
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||||| |||||||||  ||||||||||||||||||||    
T  50511991 cgggctagccctaacgggtagcgggctttttagggccgggctaaaaagccct 50512042  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 263
Target Start/End: Complemental strand, 42102298 - 42102249
Alignment:
Q  214 ggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||  ||||||| || ||||||| ||||||||||||||||||||    
T  42102298 ggctagccctaacgggtaccgagcttttaagggccgggctaaaaagccct 42102249  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 260
Target Start/End: Original strand, 40601724 - 40601792
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagc 260  Q
    |||||||||||  ||||   |||||||||||  | ||||| |||||||||| |||||||||||||||||    
T  40601724 cgggctacccgcggcccattcgggctagccctaatgggtaccgggcttttaagggccgggctaaaaagc 40601792  T

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Target: scaffold0295 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 6273 - 6186
Alignment:
Q  225 acgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattattcg 312  Q
    |||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||||| ||||||||| |||||||    
T  6273 acgggttacggacttttgcgggccgggctaaaaagccctgaaaaaattcggactgcaattattccgcccaggccctacattttattcg 6186  T

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Target: scaffold0219 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 312
Target Start/End: Original strand, 16622 - 16723
Alignment:
Q  211 acgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaattattaggcccaagccctacatattatt 310  Q
    ||||||||||||  |||||  | ||||||||||||||||||||||||||||||    || ||||| || |||||||| |||||||||||||||| |||||    
T  16622 acgggctagccctaacgggccaagggcttttacgggccgggctaaaaagccctcttcaatttcgggctacaattattcggcccaagccctacattttatt 16721  T
Q  311 cg 312  Q
    ||    
T  16722 cg 16723  T

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Target: scaffold0664 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 301
Target Start/End: Original strand, 7765 - 7874
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattagg 290  Q
    |||||||||||  ||||   ||||| |||||  ||||||| |||||||||| ||||||||||||||||||||   ||||||||| || |||| | |||||    
T  7765 cgggctacccgcggcccattcgggcaagccctaacgggtaccgggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttagg 7863  T
Q  291 cccaagcccta 301  Q
    |||||||||||    
T  7864 cccaagcccta 7874  T

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Target: scaffold1318 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 1076 - 1005
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| |||||||||| ||||||||||||| ||||||    
T  1076 cgggctacccgcggcccattcgggctagccctaacgggtaccgggcttttaagggccgggctaaagagccct 1005  T

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Target: scaffold0124 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 40038 - 40109
Alignment:
Q  192 cgggctacccgtagccctaacgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||   |||||||||||  ||||||| | |||||||| ||||||||||||||||||||    
T  40038 cgggctacccgcggcccattcgggctagccctaacgggtaccaggcttttaagggccgggctaaaaagccct 40109  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 27733 - 27682
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||||| |||||||||| ||||||||| ||||||||||    
T  27733 cgggctagccctaacgggtaccgggcttttaagggccgggcgaaaaagccct 27682  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 263
Target Start/End: Complemental strand, 56340 - 56289
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccct 263  Q
    |||||||||||  ||||||| |||| ||||| ||||||||||||||||||||    
T  56340 cgggctagccctaacgggtaccgggattttaagggccgggctaaaaagccct 56289  T

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Target: scaffold1243 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 301
Target Start/End: Complemental strand, 2122 - 2033
Alignment:
Q  212 cgggctagcccggacgggtaacgggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    |||||||||||  ||||||| ||||||| || ||| ||||||||| ||||||   |||||||||||| |||| | ||||||||||||||||    
T  2122 cgggctagccctaacgggtaccgggcttataagggtcgggctaaatagccctattaaaattcggact-caatattttaggcccaagcccta 2033  T

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Target: scaffold0173 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 21967 - 22034
Alignment:
Q  234 gggcttttacgggccgggctaaaaagccctggaaaaattcggactgcaat-tattaggcccaagcccta 301  Q
    ||||||||| ||||||||||||||||||||   ||||||||| || |||| | ||||||||||||||||    
T  21967 gggcttttaagggccgggctaaaaagccctattaaaattcgggct-caatattttaggcccaagcccta 22034  T

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