View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1153_low_43 (Length: 295)
Name: NF1153_low_43
Description: NF1153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1153_low_43 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 29 - 258
Target Start/End: Original strand, 47290797 - 47291026
Alignment:
| Q |
29 |
aataagtaggggcggagagatatggactaagcctacaaactgaaaaagaaatgtcacgacgagaaggagttaaataaagaagcttgccaatctgtttcct |
128 |
Q |
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| T |
47290797 |
aataagtaggggcggagagatatggactaagcctacaaactgaaaaagaaatgtcacgacgagaaggagttaaataaagaagcttgccaatcagcttcct |
47290896 |
T |
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| Q |
129 |
ataaggaaattcctctcttggatcttgcggtttcaaaactcgaaaaatacctgagaacactaaatcttttttaacactgttaagttcagaaagattgtta |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47290897 |
gtaaggaaattcctctcttggatcttgcggtttcaaaactcgaaaaataactgagaacactaaatcttttttaacactgttaagttcagaaagattgtta |
47290996 |
T |
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| Q |
229 |
ccataaattaataaatcattcatactaatt |
258 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
47290997 |
ccataaattaataaatcattcatactaatt |
47291026 |
T |
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