View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11541_low_31 (Length: 215)
Name: NF11541_low_31
Description: NF11541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11541_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 20059914 - 20059731
Alignment:
| Q |
16 |
agatgaatgtagttagtttcaatggatcatctaattcaacgttgacaagccacgtggaaaataagcatagaacttacgaaggtgaagtgaccgctgaaga |
115 |
Q |
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| T |
20059914 |
agatgaatgtagttagtttcaatggatcatctaattcaacgttgacaagccacgtggaaaataagcatagaacttacgaaggtgaagtgaccgctgaaga |
20059815 |
T |
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| Q |
116 |
cgaatggctcgaagccaagttcctttttagaaacagaagttattagcaaaaactagctttgacacaaatgaaatgtgtatatat |
199 |
Q |
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| T |
20059814 |
cgaatggctcgaagccatgttcctttttagaaacagaagttattagcaaaaactagctttgacacaaatgaaatgtgtatatat |
20059731 |
T |
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