View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11541_low_9 (Length: 516)

Name: NF11541_low_9
Description: NF11541
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11541_low_9
NF11541_low_9
[»] chr2 (9 HSPs)
chr2 (94-393)||(14949574-14949876)
chr2 (18-99)||(14949901-14949982)
chr2 (418-495)||(12701951-12702029)
chr2 (418-490)||(12702196-12702269)
chr2 (418-492)||(12261092-12261167)
chr2 (418-494)||(2217873-2217950)
chr2 (392-490)||(21304326-21304425)
chr2 (432-494)||(25945864-25945927)
chr2 (431-494)||(36065480-36065544)
[»] chr4 (14 HSPs)
chr4 (392-494)||(55620191-55620294)
chr4 (392-494)||(55627495-55627598)
chr4 (418-494)||(1113234-1113311)
chr4 (394-494)||(24039250-24039351)
chr4 (418-492)||(17254714-17254789)
chr4 (432-494)||(51399254-51399317)
chr4 (418-494)||(1113443-1113520)
chr4 (418-494)||(8607800-8607877)
chr4 (418-494)||(24039515-24039592)
chr4 (418-494)||(29430171-29430248)
chr4 (418-494)||(36215673-36215750)
chr4 (425-494)||(43099355-43099424)
chr4 (432-494)||(49905766-49905829)
chr4 (418-494)||(48018634-48018711)
[»] chr1 (23 HSPs)
chr1 (419-494)||(52285079-52285154)
chr1 (418-494)||(7714196-7714273)
chr1 (418-494)||(47422127-47422204)
chr1 (393-494)||(52285318-52285420)
chr1 (418-494)||(39277848-39277925)
chr1 (385-494)||(19920496-19920606)
chr1 (394-494)||(45823053-45823154)
chr1 (395-491)||(16959107-16959204)
chr1 (418-494)||(28990323-28990400)
chr1 (418-494)||(39277606-39277683)
chr1 (418-490)||(47421915-47421988)
chr1 (418-493)||(27334369-27334445)
chr1 (395-494)||(30050181-30050281)
chr1 (418-493)||(36077121-36077197)
chr1 (397-494)||(30049918-30050016)
chr1 (418-494)||(10394154-10394231)
chr1 (418-494)||(10394396-10394473)
chr1 (418-490)||(16958866-16958939)
chr1 (418-494)||(28990564-28990641)
chr1 (418-494)||(45822811-45822888)
chr1 (418-493)||(49186024-49186100)
chr1 (418-494)||(36076909-36076986)
chr1 (420-494)||(15158349-15158424)
[»] chr3 (13 HSPs)
chr3 (418-494)||(49220348-49220425)
chr3 (392-494)||(31071180-31071283)
chr3 (418-490)||(49220138-49220211)
chr3 (392-495)||(11047243-11047347)
chr3 (392-489)||(31070947-31071045)
chr3 (418-494)||(28253706-28253783)
chr3 (397-494)||(18733945-18734042)
chr3 (418-494)||(52857000-52857077)
chr3 (391-475)||(18734154-18734238)
chr3 (439-494)||(46453140-46453196)
chr3 (432-492)||(4953392-4953453)
chr3 (418-494)||(11046992-11047068)
chr3 (418-494)||(26988829-26988906)
[»] chr8 (12 HSPs)
chr8 (392-494)||(36194893-36194996)
chr8 (391-494)||(36194624-36194728)
chr8 (393-494)||(31933272-31933374)
chr8 (398-494)||(12654967-12655064)
chr8 (391-494)||(31933537-31933641)
chr8 (418-494)||(13557405-13557482)
chr8 (396-494)||(12654703-12654802)
chr8 (432-494)||(21015198-21015261)
chr8 (418-494)||(18847391-18847467)
chr8 (432-494)||(10134646-10134709)
chr8 (418-475)||(13557164-13557221)
chr8 (418-489)||(18847605-18847677)
[»] chr7 (16 HSPs)
chr7 (418-495)||(8462871-8462949)
chr7 (418-494)||(32871633-32871711)
chr7 (418-494)||(6000503-6000580)
chr7 (418-492)||(4133105-4133180)
chr7 (418-490)||(43392322-43392395)
chr7 (432-494)||(16962882-16962945)
chr7 (425-494)||(6000713-6000783)
chr7 (392-493)||(25731916-25732018)
chr7 (418-494)||(18417482-18417559)
chr7 (422-494)||(32389708-32389781)
chr7 (439-494)||(24846289-24846345)
chr7 (431-494)||(30284182-30284246)
chr7 (432-494)||(30283956-30284018)
chr7 (432-492)||(24485803-24485864)
chr7 (418-494)||(37691719-37691796)
chr7 (431-494)||(472635-472699)
[»] chr5 (7 HSPs)
chr5 (432-494)||(18508788-18508851)
chr5 (418-494)||(9989980-9990056)
chr5 (396-494)||(8417561-8417660)
chr5 (422-494)||(9990189-9990262)
chr5 (392-495)||(18968767-18968871)
chr5 (432-494)||(35463829-35463892)
chr5 (418-494)||(18968533-18968610)
[»] chr6 (1 HSPs)
chr6 (418-495)||(1211660-1211738)
[»] scaffold0220 (1 HSPs)
scaffold0220 (432-494)||(26001-26064)


Alignment Details
Target: chr2 (Bit Score: 181; Significance: 1e-97; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 94 - 393
Target Start/End: Complemental strand, 14949876 - 14949574
Alignment:
Q  94 agaggaagcaatgttattaaaggaggtgtccagcctaaagtttttaagcaaggggacggagccatattcata---------gtgcagtccaatgtggtgc 184  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||          |||||||||||||||||||    
T  14949876 agaggaaacaatgttattaaagaaggtgtccagcctaaagtttttaagcaaggggtcggagccatattcatcaagaggcaggtgcagtccaatgtggtgc 14949777  T
Q  185 atgcccagtaagggaagagagcaacaactagca--taccatgcctacccaacagtatgaagg-catataaagaaggatgggaatccaactaagcacgata 281  Q
        |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  14949776 ----ccagcaagggaagagagcaacaactagcagctaccatgcctacccaacagtatgaaggacatataaagaaggatgggaatccaactaagcacaata 14949681  T
Q  282 agcctcccgatcctaatttaatgggg-aagatcacatgcaaattgaagaaatcaacaaaaatgtggatagagagaggtcgtgaagagcatgccaaggact 380  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    | |||    
T  14949680 agcctcccgatcctaatttaatggggaaagatcacatgcaaattgaagaaatcaacaaaaatgtggat--agagaggtcgtgaagagcatg----gcact 14949587  T
Q  381 gaagaaaaagata 393  Q
    |||||||||||||    
T  14949586 gaagaaaaagata 14949574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 14949982 - 14949901
Alignment:
Q  18 attactcgtattatttcatagggggcgagtactatannnnnnngtttagttacatgagagtaatatatcttaatatagagga 99  Q
    |||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  14949982 attacttgtattatttcatagggggcgagtactatatttttttgtttagttacatgagagtaatatatcttaatatagagga 14949901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 418 - 495
Target Start/End: Original strand, 12701951 - 12702029
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtatt 495  Q
    ||||||||||| |||||||||||||||| ||||| |||||| | ||| |||||||| ||||||||| ||||||||||||    
T  12701951 taacttgatttcaagtatcggtttggtcccataagtaataaaaggtccgtttaggtcccttaacttcatttaaagtatt 12702029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 490
Target Start/End: Complemental strand, 12702269 - 12702196
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 490  Q
    ||||||||| | |||||||||||||||| ||||| |||||| | ||| |||||||| |||||||||||||||||    
T  12702269 taacttgatatcaagtatcggtttggtcccataagtaataaaaggtccgtttaggtcccttaactttatttaaa 12702196  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 492
Target Start/End: Complemental strand, 12261167 - 12261092
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagt 492  Q
    ||||||||||| |||||||||||||||| |||||  ||||| | ||| |||||| | |||||||||||||||||||    
T  12261167 taacttgatttcaagtatcggtttggtcacataagcaataaaaggtccgtttagctcccttaactttatttaaagt 12261092  T

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Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 494
Target Start/End: Complemental strand, 2217950 - 2217873
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| |||||  ||||||||| ||||| |||||| | ||| ||||| || |||||||||||||||||||||    
T  2217950 taacttgatttcaagtaatggtttggtcccataagtaataaaatgtccgtttatgtcccttaactttatttaaagtat 2217873  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 490
Target Start/End: Original strand, 21304326 - 21304425
Alignment:
Q  392 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtc-cttaactttatttaaa 490  Q
    |||||||||||| ||  |||||  | ||||||||||| || ||||||||||||| ||||| |||||| | ||  |||||| || ||||||||||||||||    
T  21304326 taggcttaaatgctcaattgatcccttaacttgatttcaaatatcggtttggtcccataagtaataaaatgttcgtttagatcgcttaactttatttaaa 21304425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 432 - 494
Target Start/End: Original strand, 25945864 - 25945927
Alignment:
Q  432 gtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 494  Q
    |||||| ||||||| ||||| |||||| |  ||||||||||||| |||||||||||||||||||    
T  25945864 gtatcgctttggtcccataagtaataaaagatctgtttaggtcccttaactttatttaaagtat 25945927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 494
Target Start/End: Complemental strand, 36065544 - 36065480
Alignment:
Q  431 agtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||| ||||||||||||| |||||| | ||| |||| ||| ||||||||||||| |||||||    
T  36065544 agtatcgttttggtctcataagtaataaaaggtccgttttggtcccttaactttattgaaagtat 36065480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 6e-23; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 55620191 - 55620294
Alignment:
Q  392 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 490  Q
    |||||||||||| ||||||| |  | ||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||| ||||||||||||| |||    
T  55620191 taggcttaaatgctcttttggtcccttaacttgatttcaagtatcggtttggtcccataagtaataaaaagtctgtttaggtcccttaactttattaaaa 55620290  T
Q  491 gtat 494  Q
    ||||    
T  55620291 gtat 55620294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 55627495 - 55627598
Alignment:
Q  392 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 490  Q
    |||||||||||| ||||||| |  | ||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||| ||||||||||||| |||    
T  55627495 taggcttaaatgctcttttggtcccttaacttgatttcaagtatcggtttggtcccataagtaataaaaagtctgtttaggtcccttaactttattaaaa 55627594  T
Q  491 gtat 494  Q
    ||||    
T  55627595 gtat 55627598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 1113234 - 1113311
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| ||||||||| |||||| ||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  1113234 taacttgatttcaagtatcgggttggtcccataagtaataaaaagtctgtttaggtcccttaactttatttaaagtat 1113311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 394 - 494
Target Start/End: Original strand, 24039250 - 24039351
Alignment:
Q  394 ggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagt 492  Q
    |||||||||||||  |||||  | ||||||||||| |||||||||||||||| ||||| |||||| ||||  |||||||||| |||| ||||||||||||    
T  24039250 ggcttaaatgttcaattgatcccttaacttgatttcaagtatcggtttggtcccataagtaataaaaagttcgtttaggtcctttaattttatttaaagt 24039349  T
Q  493 at 494  Q
    ||    
T  24039350 at 24039351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 492
Target Start/End: Complemental strand, 17254789 - 17254714
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagt 492  Q
    ||||||||||| |||||| |||||| |||||||| |||||| | ||| |||||||| |||||||||||||||||||    
T  17254789 taacttgatttcaagtattggtttgatctcataagtaataaaatgtccgtttaggtcccttaactttatttaaagt 17254714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 432 - 494
Target Start/End: Original strand, 51399254 - 51399317
Alignment:
Q  432 gtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    |||||| ||||||| ||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  51399254 gtatcgctttggtcccataagtaataaaaagtctgtttaggtcccttaactttatttaaagtat 51399317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 494
Target Start/End: Complemental strand, 1113520 - 1113443
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| |||||| | ||||||| |||||||| ||| | |||||||||||| ||||||||| |||||||||||    
T  1113520 taacttgatttcaagtattgatttggtcccataaatattaaaaggtctgtttaggtcccttaacttcatttaaagtat 1113443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 8607800 - 8607877
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| ||||||||||||| || ||||| |||||| | ||| ||||| || |||||||||||||||||||||    
T  8607800 taacttgatttcaagtatcggtttgatcccataagtaataaaaggtccgtttaagtcccttaactttatttaaagtat 8607877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 494
Target Start/End: Complemental strand, 24039592 - 24039515
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| |||||| ||||||||||||||| |||||| | ||  |||||||| |||||||||||||| ||||||    
T  24039592 taacttgatttcaagtattggtttggtctcataagtaataaaaggttcgtttaggtcccttaactttattttaagtat 24039515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 494
Target Start/End: Complemental strand, 29430248 - 29430171
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    |||||||||||||||||| ||||||||| ||||| |||||| | || ||||||| | |||||| ||||||||||||||    
T  29430248 taacttgattttaagtattggtttggtcccataagtaataaaaggtatgtttagatcccttaattttatttaaagtat 29430171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 36215673 - 36215750
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttag-gtccttaactttatttaaagtat 494  Q
    |||||| |||| |||||||||||||||| ||||| |||||| | ||| ||||||  ||||||||||||||||||||||    
T  36215673 taacttaatttcaagtatcggtttggtcccataagtaataaaaggtccgtttagattccttaactttatttaaagtat 36215750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 425 - 494
Target Start/End: Original strand, 43099355 - 43099424
Alignment:
Q  425 attttaagtatcggtttggtctcataaataataagaagtctgtttaggtccttaactttatttaaagtat 494  Q
    ||||||| |||||||||| |  ||||| |||||| | ||| |||||||||||||||||||||||||||||    
T  43099355 attttaaatatcggtttgattccataagtaataaaaggtccgtttaggtccttaactttatttaaagtat 43099424  T

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Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 432 - 494
Target Start/End: Original strand, 49905766 - 49905829
Alignment:
Q  432 gtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    |||||| ||||||||||||| |||||| | ||| |||||||| |||||||||||||||||||||    
T  49905766 gtatcgctttggtctcataagtaataaaaggtccgtttaggtcccttaactttatttaaagtat 49905829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 48018634 - 48018711
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| || ||||||||||||| || || |||||| |  ||||||||| | |||||| ||||||||||||||    
T  48018634 taacttgatttaaaatatcggtttggtcccaaaagtaataaaatatctgtttagatcccttaattttatttaaagtat 48018711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 6e-23; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 419 - 494
Target Start/End: Original strand, 52285079 - 52285154
Alignment:
Q  419 aacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtccttaactttatttaaagtat 494  Q
    ||||| ||||||||||| ||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  52285079 aacttaattttaagtattggtttggtctcataagtaataaaaagtccgtttaggtccttaactttatttaaagtat 52285154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 7714196 - 7714273
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    |||||||||||||||||||||||||||| ||||| |||||| |||||||| ||||| |||||||||||||||||||||    
T  7714196 taacttgattttaagtatcggtttggtcccataagtaataaaaagtctgtctaggtcccttaactttatttaaagtat 7714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 418 - 494
Target Start/End: Complemental strand, 47422204 - 47422127
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| |||||||||||||||| ||||| |||||||| |||||||||||| |||||||||||||||||||||    
T  47422204 taacttgatttcaagtatcggtttggtcccataagtaataagaggtctgtttaggtcccttaactttatttaaagtat 47422127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 393 - 494
Target Start/End: Complemental strand, 52285420 - 52285318
Alignment:
Q  393 aggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaag 491  Q
    ||||||||||||||||||| |  | |||||||||||||||||||  |||||||  |||| |||||| | |||||||||||| ||||||||||||||||||    
T  52285420 aggcttaaatgttcttttggtcccttaacttgattttaagtatcaatttggtcctataagtaataaaaggtctgtttaggtcccttaactttatttaaag 52285321  T
Q  492 tat 494  Q
    |||    
T  52285320 tat 52285318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 418 - 494
Target Start/End: Complemental strand, 39277925 - 39277848
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| |||||||||||||||| ||||| |||||| ||||| |||||||| |||||||||||||||||||||    
T  39277925 taacttgatttcaagtatcggtttggtcccataagtaataaaaagtccgtttaggtcccttaactttatttaaagtat 39277848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 494
Target Start/End: Original strand, 19920496 - 19920606
Alignment:
Q  385 aaaaagataggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaacttt 483  Q
    ||||| ||||||||||||| ||  |||||  | ||||||||||| |||||||||||||||| ||||| |||||| |  || |||||||| ||||||||||    
T  19920496 aaaaaaataggcttaaatgctcaattgatcccttaacttgatttcaagtatcggtttggtcccataagtaataaaagatccgtttaggtcccttaacttt 19920595  T
Q  484 atttaaagtat 494  Q
    |||||||||||    
T  19920596 atttaaagtat 19920606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 394 - 494
Target Start/End: Complemental strand, 45823154 - 45823053
Alignment:
Q  394 ggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagt 492  Q
    |||||||||||||  |||||  | ||||||||||| || ||| ||||||||| ||||| |||||| ||||| |||||||| |||||||||||||||||||    
T  45823154 ggcttaaatgttcaattgatcccttaacttgatttcaaatattggtttggtcccataagtaataaaaagtccgtttaggtcccttaactttatttaaagt 45823055  T
Q  493 at 494  Q
    ||    
T  45823054 at 45823053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 395 - 491
Target Start/End: Complemental strand, 16959204 - 16959107
Alignment:
Q  395 gcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaag 491  Q
    ||||||||| |||||||||    | ||||||||| |||||||||||||||| ||||| |||||| || | ||||||||| ||||||||||||||||||    
T  16959204 gcttaaatgctcttttgatcctttgacttgatttcaagtatcggtttggtcccataagtaataaaaattatgtttaggtcccttaactttatttaaag 16959107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 28990323 - 28990400
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| |||||||||||||||| ||||| |||||| | ||| | |||||| |||||||||||||||||||||    
T  28990323 taacttgatttcaagtatcggtttggtcccataagtaataaaaggtccgcttaggtcccttaactttatttaaagtat 28990400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 39277606 - 39277683
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 494  Q
    |||||| |||| ||||||| |||||||| ||||| |||||| ||||| |||||||||| |||||||||||||||||||    
T  39277606 taacttaatttcaagtatcagtttggtcccataagtaataaaaagtccgtttaggtcccttaactttatttaaagtat 39277683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 490
Target Start/End: Original strand, 47421915 - 47421988
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 490  Q
    ||||||||||| || ||||||||||||| ||||| |||||| | |||||||||||| |||||||||||||||||    
T  47421915 taacttgatttcaaatatcggtttggtcccataagtaataaaatgtctgtttaggtcccttaactttatttaaa 47421988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 418 - 493
Target Start/End: Original strand, 27334369 - 27334445
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagta 493  Q
    ||||||||||| |||||||| ||||||||||||| |||||| |  || |||||||| ||||||||||||||||||||    
T  27334369 taacttgatttcaagtatcgatttggtctcataagtaataaaagatccgtttaggtcccttaactttatttaaagta 27334445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 395 - 494
Target Start/End: Complemental strand, 30050281 - 30050181
Alignment:
Q  395 gcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtc-cttaactttatttaaagta 493  Q
    ||||||||||||||||| |    ||||||||||| |||||||||||||||| || || |||||| ||||| | ||| ||| |||||||||||||||||||    
T  30050281 gcttaaatgttcttttggtccattaacttgatttcaagtatcggtttggtcgcacaagtaataaaaagtccgattatgtctcttaactttatttaaagta 30050182  T
Q  494 t 494  Q
    |    
T  30050181 t 30050181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 418 - 493
Target Start/End: Complemental strand, 36077197 - 36077121
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttagg-tccttaactttatttaaagta 493  Q
    ||||||||||| ||||||||||||| || ||||| |||||| | ||||||||||| || ||||||||||||||||||    
T  36077197 taacttgatttcaagtatcggtttgctcccataagtaataaaaggtctgtttaggttcattaactttatttaaagta 36077121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 494
Target Start/End: Original strand, 30049918 - 30050016
Alignment:
Q  397 ttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgttt-aggtccttaactttatttaaagtat 494  Q
    ||||||| ||||||| |  | |||||| |||| |||||||||||||||||||||  |||||| ||||| |||| ||  |||||||||||||||||||||    
T  30049918 ttaaatgctcttttggtcccttaactttatttcaagtatcggtttggtctcatatgtaataaaaagtccgtttgagtcccttaactttatttaaagtat 30050016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 10394154 - 10394231
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| |||||||||||||||| ||||| |||||| | ||  |||||| | |||||||||||||||||||||    
T  10394154 taacttgatttcaagtatcggtttggtcccataagtaataaaaggttcgtttagatcccttaactttatttaaagtat 10394231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 494
Target Start/End: Complemental strand, 10394473 - 10394396
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| |||||| | ||||||| |||||||| ||| | ||| |||||||| |||||||||||||||||||||    
T  10394473 taacttgatttcaagtattgttttggtcccataaatattaaaaggtccgtttaggtcccttaactttatttaaagtat 10394396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 490
Target Start/End: Original strand, 16958866 - 16958939
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 490  Q
    ||||||||||| |||| ||||||||||| |||||||||||| | |||  ||||||| |||||||||||||||||    
T  16958866 taacttgatttcaagtgtcggtttggtcccataaataataaaaggtccatttaggtcccttaactttatttaaa 16958939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 494
Target Start/End: Complemental strand, 28990641 - 28990564
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| |||||| ||||||||| ||||| |||||| | ||| |||||||| ||||||||| |||||||||||    
T  28990641 taacttgatttcaagtattggtttggtcccataagtaataaaaggtccgtttaggtcccttaacttcatttaaagtat 28990564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 45822811 - 45822888
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    |||||| |||| |||||||  ||||||| ||||| |||||| ||||| |||||||| |||||||||||||||||||||    
T  45822811 taacttaatttcaagtatcaatttggtcccataagtaataaaaagtccgtttaggttccttaactttatttaaagtat 45822888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 493
Target Start/End: Original strand, 49186024 - 49186100
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagta 493  Q
    ||||||||||| ||||||| ||||||||| |||| |||||| | ||| ||||| |||| ||||||||||||||||||    
T  49186024 taacttgatttcaagtatcagtttggtcttataagtaataaaaggtccgtttacgtcctttaactttatttaaagta 49186100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 36076909 - 36076986
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| ||||||||| ||| || ||||| |||||| | ||  |||||||| |||||||||||||||||||||    
T  36076909 taacttgatttcaagtatcggcttgatcccataagtaataaaaggttcgtttaggtcccttaactttatttaaagtat 36076986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 494
Target Start/End: Original strand, 15158349 - 15158424
Alignment:
Q  420 acttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||| |||||||||||||||| ||||| |||||| | ||  |||||||| |||||| ||||||| ||||||    
T  15158349 acttgatttcaagtatcggtttggtcccataagtaataaaaggttcgtttaggtcccttaaatttatttcaagtat 15158424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 9e-22; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 418 - 494
Target Start/End: Complemental strand, 49220425 - 49220348
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    |||||| |||| |||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||    
T  49220425 taacttaatttcaagtatcggtttggtcccataaataataaaaagtctgtttaggtcccttaactttatttaaagtat 49220348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 31071283 - 31071180
Alignment:
Q  392 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 490  Q
    |||||||||||| ||||||  |  | ||||||||||| ||||||||||||| || |||||||||||| | |||||||||||| |||||||||||||||||    
T  31071283 taggcttaaatgctcttttcttcccttaacttgatttcaagtatcggtttgatcccataaataataaaaggtctgtttaggtcccttaactttatttaaa 31071184  T
Q  491 gtat 494  Q
    ||||    
T  31071183 gtat 31071180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 418 - 490
Target Start/End: Original strand, 49220138 - 49220211
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaa 490  Q
    |||||||||||||||||||||||| ||| |||||||||||| ||||| |||||||||| |||||||||||||||    
T  49220138 taacttgattttaagtatcggtttagtcccataaataataaaaagtccgtttaggtcctttaactttatttaaa 49220211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 11047347 - 11047243
Alignment:
Q  392 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 490  Q
    |||||||||||||||  ||| |  | ||||||||||| |||||||||||||||| ||||| |||||| | ||| |||||||| |||||||||||||||||    
T  11047347 taggcttaaatgttcaattggtcccttaacttgatttcaagtatcggtttggtcccataagtaataaaaggtccgtttaggtcccttaactttatttaaa 11047248  T
Q  491 gtatt 495  Q
    |||||    
T  11047247 gtatt 11047243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 31070947 - 31071045
Alignment:
Q  392 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaa 489  Q
    |||||||||||||||||||| |  | ||||||||||||||||||| |||||||| ||||| |||||| |  || ||||| || ||||||||||||||||    
T  31070947 taggcttaaatgttcttttggtcccttaacttgattttaagtatcagtttggtcccataagtaataaaagatccgtttaagtcccttaactttatttaa 31071045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 494
Target Start/End: Complemental strand, 28253783 - 28253706
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| ||||||||| |||||| |||||||||||| | ||||| ||| || |||||||||||||||||||||    
T  28253783 taacttgatttcaagtatcggattggtcccataaataataaaaggtctgattaagtcccttaactttatttaaagtat 28253706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 494
Target Start/End: Original strand, 18733945 - 18734042
Alignment:
Q  397 ttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||| ||||||||| |  | ||||||||||| ||||||| |||||||| ||| |||| ||| ||||||||||| || |||||||||||||||||||||    
T  18733945 ttaaacgttcttttggtctcttaacttgatttcaagtatcagtttggtcccat-aatagtaaaaagtctgtttaagtcccttaactttatttaaagtat 18734042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 52857000 - 52857077
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    |||||| |||| |||||||||||||||| ||||| |||||| | ||| |||||| | |||||||||||||||||||||    
T  52857000 taacttaatttcaagtatcggtttggtcccataagtaataaaaggtccgtttagataccttaactttatttaaagtat 52857077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 475
Target Start/End: Complemental strand, 18734238 - 18734154
Alignment:
Q  391 ataggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc 475  Q
    |||| |||||||| |||||||||    |||||| |||||||||||||| |||||| | ||| |||||| ||||||||||||||||    
T  18734238 atagacttaaatgctcttttgatccattaactttattttaagtatcggcttggtcccttaagtaataaaaagtctgtttaggtcc 18734154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 439 - 494
Target Start/End: Complemental strand, 46453196 - 46453140
Alignment:
Q  439 tttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||||| |||||| ||||| |||||||| |||||||||||||||||||||    
T  46453196 tttggtctcataagtaataaaaagtccgtttaggtcccttaactttatttaaagtat 46453140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 432 - 492
Target Start/End: Complemental strand, 4953453 - 4953392
Alignment:
Q  432 gtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagt 492  Q
    |||||| ||||||| ||||| |||||| ||||||||||| || |||||||||||||||||||    
T  4953453 gtatcgttttggtcccataagtaataaaaagtctgtttaagtcccttaactttatttaaagt 4953392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 11046992 - 11047068
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtccttaactttatttaaagtat 494  Q
    ||||||||||| | |||||||||||||| |||||  ||||| | |||  |||||||| |||||||||||| ||||||    
T  11046992 taacttgatttcatgtatcggtttggtcccataagaaataaaaggtccctttaggtctttaactttatttcaagtat 11047068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 26988829 - 26988906
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 494  Q
    |||||| |||| ||||||| |||| ||| ||||| |||||| | |||  ||||||||| |||||||||||||||||||    
T  26988829 taactttatttcaagtatcagttttgtcccataagtaataaaatgtccttttaggtcccttaactttatttaaagtat 26988906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 36194996 - 36194893
Alignment:
Q  392 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaa 490  Q
    |||||||||||| ||||||  |  | |||||||||||||||||||||||||||| |||||||||| | || || |||||||||| |||||||||||||||    
T  36194996 taggcttaaatgctcttttagtcccttaacttgattttaagtatcggtttggtcccataaataatcaaaaatccgtttaggtcctttaactttatttaaa 36194897  T
Q  491 gtat 494  Q
    ||||    
T  36194896 gtat 36194893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 391 - 494
Target Start/End: Original strand, 36194624 - 36194728
Alignment:
Q  391 ataggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaa 489  Q
    ||||||||||||| ||||||  |  | ||||||||||| |||||||| ||||||| ||||| |||||| |||||||||||| | ||||||||||||||||    
T  36194624 ataggcttaaatgctcttttagtcccttaacttgatttcaagtatcgttttggtcccataagtaataaaaagtctgtttagatcccttaactttatttaa 36194723  T
Q  490 agtat 494  Q
    |||||    
T  36194724 agtat 36194728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 393 - 494
Target Start/End: Original strand, 31933272 - 31933374
Alignment:
Q  393 aggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaag 491  Q
    ||||||||||||||||||| |  | ||| |||||||||||||| ||||||||| ||||| |||||| | |||| ||||| | ||||||||||||||||||    
T  31933272 aggcttaaatgttcttttggtcccttaatttgattttaagtattggtttggtcccataagtaataaaaggtctatttagatcccttaactttatttaaag 31933371  T
Q  492 tat 494  Q
    |||    
T  31933372 tat 31933374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 398 - 494
Target Start/End: Complemental strand, 12655064 - 12654967
Alignment:
Q  398 taaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    |||||| |||||||||  | ||||||||||| |||||||||||||||| ||||| |||||| |  || |||||||| |||||||||||||||||||||    
T  12655064 taaatgctcttttgatcccttaacttgatttcaagtatcggtttggtcccataagtaataaaagttccgtttaggtcccttaactttatttaaagtat 12654967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 391 - 494
Target Start/End: Complemental strand, 31933641 - 31933537
Alignment:
Q  391 ataggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaa 489  Q
    ||||||||||||| ||||||| |  | ||||||||||| |||||||||||||||| ||||| |||||| |||||  ||||| |||  |||||||||||||    
T  31933641 ataggcttaaatgctcttttggtcccttaacttgatttcaagtatcggtttggtcccataagtaataaaaagtccatttagatccgctaactttatttaa 31933542  T
Q  490 agtat 494  Q
    |||||    
T  31933541 agtat 31933537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 494
Target Start/End: Complemental strand, 13557482 - 13557405
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| |||||||||||||||| ||||| |||||| | ||| |||||||| ||||||||| |||||||||||    
T  13557482 taacttgatttcaagtatcggtttggtcccataagtaataaaaggtccgtttaggtcccttaacttcatttaaagtat 13557405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 396 - 494
Target Start/End: Original strand, 12654703 - 12654802
Alignment:
Q  396 cttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttag-gtccttaactttatttaaagtat 494  Q
    |||||||| ||||||| |  | |||||| |||| |||| ||||||||||| |||||||||||| | |||  |||||  ||||||||||||||||||||||    
T  12654703 cttaaatgctcttttggtcccttaactttatttcaagtgtcggtttggtcccataaataataaaaggtccatttagtttccttaactttatttaaagtat 12654802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 432 - 494
Target Start/End: Complemental strand, 21015261 - 21015198
Alignment:
Q  432 gtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 494  Q
    |||||| ||||||| ||||| |||||| |||||||||| ||||| |||||||||||||||||||    
T  21015261 gtatcgctttggtcccataagtaataaaaagtctgtttgggtcccttaactttatttaaagtat 21015198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 18847391 - 18847467
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 494  Q
    ||||||||||| |||||||| || |||||||||| |||||| | || |||||| |||| |||||||||||||||||||    
T  18847391 taacttgatttcaagtatcgatt-ggtctcataagtaataaaaggtttgtttatgtcccttaactttatttaaagtat 18847467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 432 - 494
Target Start/End: Original strand, 10134646 - 10134709
Alignment:
Q  432 gtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 494  Q
    |||||| ||||||| ||||| |||||| | ||| |||||||||| |||||||||||||||||||    
T  10134646 gtatcgctttggtcccataagtaataaaaggtccgtttaggtcccttaactttatttaaagtat 10134709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 475
Target Start/End: Original strand, 13557164 - 13557221
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc 475  Q
    ||||||||||| |||||||||||||||| ||||| |||||| | ||  ||||||||||    
T  13557164 taacttgatttcaagtatcggtttggtcccataagtaataaaaggttcgtttaggtcc 13557221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 418 - 489
Target Start/End: Complemental strand, 18847677 - 18847605
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaa 489  Q
    ||||||||||| ||||||| |||| ||| ||||| |||||| |||||| |||| || |||||||||| |||||    
T  18847677 taacttgatttcaagtatcagttttgtcccataagtaataaaaagtctatttaagtcccttaactttgtttaa 18847605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 418 - 495
Target Start/End: Original strand, 8462871 - 8462949
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtatt 495  Q
    ||||||||||| || |||| |||||||| |||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  8462871 taacttgatttcaaatatcagtttggtcccataaataataaaatgtctgtttaggtcctttaactttatttaaagtatt 8462949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 32871633 - 32871711
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataat-aagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    |||||||||||||||||| ||||||||| |||||||||| || || ||||||||||| |||||||||||||||||||||    
T  32871633 taacttgattttaagtattggtttggtcccataaataataaaaaaatctgtttaggtcccttaactttatttaaagtat 32871711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 6000503 - 6000580
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |||||  ||||||| |||||||||||||||||||||    
T  6000503 taacttgatttcaagtatcggtttggtcccataagtaataaaaagtccatttaggtcccttaactttatttaaagtat 6000580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 492
Target Start/End: Complemental strand, 4133180 - 4133105
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagt 492  Q
    ||||||||||| |||||| |||||| |||||||| |||||| | ||| |||||||| |||||||||||||||||||    
T  4133180 taacttgatttcaagtattggtttgatctcataagtaataaaatgtccgtttaggtcccttaactttatttaaagt 4133105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 490
Target Start/End: Original strand, 43392322 - 43392395
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 490  Q
    ||||||||||| |||||| ||||||||| |||||||| ||| | ||| |||||||| |||||||||||||||||    
T  43392322 taacttgatttcaagtattggtttggtcccataaatattaaaaggtccgtttaggtcccttaactttatttaaa 43392395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 432 - 494
Target Start/End: Original strand, 16962882 - 16962945
Alignment:
Q  432 gtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 494  Q
    |||||| ||||||||||||| |||||| | ||| |||||||||| |||||||||||||||||||    
T  16962882 gtatcgctttggtctcataagtaataaaaggtccgtttaggtccattaactttatttaaagtat 16962945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 6000783 - 6000713
Alignment:
Q  425 attttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 494  Q
    |||| ||||||| ||||||||  |||| |||||| ||||| |||||||||| |||||||||||||||||||    
T  6000783 atttcaagtatcagtttggtcctataagtaataaaaagtccgtttaggtcccttaactttatttaaagtat 6000713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 493
Target Start/End: Original strand, 25731916 - 25732018
Alignment:
Q  392 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 490  Q
    |||||||||||| ||||||| |  | ||||||||||| |||||||||||| ||| ||||| |||||| | ||||| |||| | ||||||||| |||| ||    
T  25731916 taggcttaaatgctcttttggtcccttaacttgatttcaagtatcggtttagtcccataagtaataaaaggtctgcttagatcccttaacttgatttcaa 25732015  T
Q  491 gta 493  Q
    |||    
T  25732016 gta 25732018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 494
Target Start/End: Complemental strand, 18417559 - 18417482
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    |||||| |||| ||||||||||||| ||  ||||||||||| | |||  ||||||| |||||||||||||||||||||    
T  18417559 taactttatttcaagtatcggtttgatcctataaataataaaaggtccatttaggtcccttaactttatttaaagtat 18417482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 494
Target Start/End: Complemental strand, 32389781 - 32389708
Alignment:
Q  422 ttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 494  Q
    ||||||| ||||||| ||||||||  |||| |||||| | ||||||||| |||| |||||||||||||||||||    
T  32389781 ttgatttcaagtatcagtttggtccaataagtaataaaatgtctgtttaagtcccttaactttatttaaagtat 32389708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 494
Target Start/End: Original strand, 24846289 - 24846345
Alignment:
Q  439 tttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||||| |||||| | ||| |||||||| |||||||||||||||||||||    
T  24846289 tttggtctcataagtaataaaaggtccgtttaggtcccttaactttatttaaagtat 24846345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 494
Target Start/End: Complemental strand, 30284246 - 30284182
Alignment:
Q  431 agtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||| ||||||||||||| |||||| | ||| |||||||| ||||||||||||| |||||||    
T  30284246 agtatcgctttggtctcataagtaataaaatgtccgtttaggtcccttaactttattgaaagtat 30284182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 494
Target Start/End: Original strand, 30283956 - 30284018
Alignment:
Q  432 gtatcggtttggtctcataaataataagaagtctgtttaggtccttaactttatttaaagtat 494  Q
    |||||| ||||||||||||| |||||| | ||| ||||||  ||||||||| |||||||||||    
T  30283956 gtatcgttttggtctcataagtaataaaaggtccgtttagtcccttaacttcatttaaagtat 30284018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 492
Target Start/End: Complemental strand, 24485864 - 24485803
Alignment:
Q  432 gtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagt 492  Q
    |||||| ||||||| ||||| |||||| ||||| ||||| |||| |||||||||||||||||    
T  24485864 gtatcgttttggtcccataagtaataaaaagtccgtttaagtcccttaactttatttaaagt 24485803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 37691719 - 37691796
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| ||||||||||||| |  ||||| |||||| ||||| | ||| || |||||| ||||||||||||||    
T  37691719 taacttgatttcaagtatcggtttgattccataagtaataaaaagtccgattaagtcccttaattttatttaaagtat 37691796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 431 - 494
Target Start/End: Original strand, 472635 - 472699
Alignment:
Q  431 agtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||| ||||||||||||| |||||| | ||  |||||||| ||||||||||||| |||||||    
T  472635 agtatcgttttggtctcataagtaataaaaggtgcgtttaggtcccttaactttattgaaagtat 472699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 8e-16; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 432 - 494
Target Start/End: Complemental strand, 18508851 - 18508788
Alignment:
Q  432 gtatcggtttggtctcataaataataagaagtctgtttagg-tccttaactttatttaaagtat 494  Q
    |||||| ||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  18508851 gtatcgatttggtcccataaataataaaaagtctgtttaggttccttaactttatttaaagtat 18508788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 9989980 - 9990056
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||||||| |||||||||||| ||||| |||||| | || ||||||||| |||||||||||||||||||||    
T  9989980 taacttgattttaagaatcggtttggtc-cataattaataaaaggtatgtttaggtcccttaactttatttaaagtat 9990056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 494
Target Start/End: Original strand, 8417561 - 8417660
Alignment:
Q  396 cttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    |||||||| ||||||| |  | ||||||||||| ||||||||||||| ||||| || |||||| |  || |||||||| |||||||||||||||||||||    
T  8417561 cttaaatgctcttttggtcccttaacttgatttcaagtatcggtttgatctcacaagtaataaaagttccgtttaggtcccttaactttatttaaagtat 8417660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 494
Target Start/End: Complemental strand, 9990262 - 9990189
Alignment:
Q  422 ttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||||||| ||||| | ||||||||||| | |  ||||||||||| |||||||||||||||||||||    
T  9990262 ttgattttaagtatcagtttgatttcataaataatgaaagatctgtttaggtcccttaactttatttaaagtat 9990189  T

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Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 18968871 - 18968767
Alignment:
Q  392 taggcttaaatgttcttttgattgcgtaacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaa 490  Q
    |||| ||||||| ||  |||||| | ||||||||||| ||||||||||||| || |||||||||||| | || ||||| | | |||||||||||| ||||    
T  18968871 taggtttaaatgctcaattgattccttaacttgatttcaagtatcggtttgatcccataaataataaaaggtatgtttggatcccttaactttatataaa 18968772  T
Q  491 gtatt 495  Q
    |||||    
T  18968771 gtatt 18968767  T

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Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 432 - 494
Target Start/End: Complemental strand, 35463892 - 35463829
Alignment:
Q  432 gtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 494  Q
    |||||| ||||||| ||||| |||||| |||||||||| ||||| |||||||||||||||||||    
T  35463892 gtatcgctttggtcccataagtaataaaaagtctgtttcggtcccttaactttatttaaagtat 35463829  T

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Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 418 - 494
Target Start/End: Original strand, 18968533 - 18968610
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtat 494  Q
    ||||||||||| |||||| |||||||| ||||||  ||||| |  || |||||||| |||||||||||||||||||||    
T  18968533 taacttgatttcaagtattggtttggtttcataatcaataaaagatccgtttaggtcccttaactttatttaaagtat 18968610  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 418 - 495
Target Start/End: Complemental strand, 1211738 - 1211660
Alignment:
Q  418 taacttgattttaagtatcggtttggtctcataaataataagaagtctgtttaggt-ccttaactttatttaaagtatt 495  Q
    ||||||||||| ||||||| |||||||||||||| |||||| |  ||||||||| | ||||||||||||||||||||||    
T  1211738 taacttgatttcaagtatctgtttggtctcataagtaataaaagatctgtttagatcccttaactttatttaaagtatt 1211660  T

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Target: scaffold0220 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 432 - 494
Target Start/End: Original strand, 26001 - 26064
Alignment:
Q  432 gtatcggtttggtctcataaataataagaagtctgtttaggtcc-ttaactttatttaaagtat 494  Q
    |||||| ||||||| ||||| |||||| |||| |||||| |||| |||||||||||||||||||    
T  26001 gtatcgctttggtcccataagtaataaaaagtttgtttaagtcccttaactttatttaaagtat 26064  T

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