View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11543_low_25 (Length: 297)
Name: NF11543_low_25
Description: NF11543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11543_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 171; Significance: 7e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 97 - 283
Target Start/End: Original strand, 10048642 - 10048828
Alignment:
| Q |
97 |
gagggtcaaattctcacgataattcttttttatgaagaattattataacatttggttaataagcaaatatgttggtatatcaataatcgtattagagcta |
196 |
Q |
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| T |
10048642 |
gagggtcaaattctcacgataattcttttttatgaagaattattataacatttggttaataagcaaatatgttggtatatcaataatcgtattggagcta |
10048741 |
T |
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| Q |
197 |
gctaaaaatgtagttattcatgtcattgcatgaattacctcatttgttagtctccgactaaactcaacacgaatttcattaccctct |
283 |
Q |
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| T |
10048742 |
gctaaaaatgtagttattcatgtcattgcatgaattacctcatttgttagtctgcgactaaactcaacacaaattttattaccctct |
10048828 |
T |
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