View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11543_low_3 (Length: 803)

Name: NF11543_low_3
Description: NF11543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11543_low_3
NF11543_low_3
[»] chr2 (29 HSPs)
chr2 (225-792)||(21313474-21314041)
chr2 (18-160)||(21314106-21314248)
chr2 (710-785)||(21738613-21738688)
chr2 (711-785)||(40358109-40358183)
chr2 (368-429)||(25542590-25542651)
chr2 (710-785)||(3771370-3771445)
chr2 (707-785)||(29192649-29192726)
chr2 (711-785)||(43658707-43658781)
chr2 (711-779)||(1416042-1416110)
chr2 (710-785)||(12784396-12784471)
chr2 (711-777)||(7258567-7258633)
chr2 (711-785)||(17917389-17917462)
chr2 (711-785)||(24766152-24766226)
chr2 (711-785)||(26290848-26290922)
chr2 (710-784)||(44287439-44287512)
chr2 (710-750)||(5095985-5096025)
chr2 (714-785)||(5361798-5361867)
chr2 (712-772)||(7502438-7502498)
chr2 (710-778)||(7664073-7664141)
chr2 (709-781)||(8427550-8427622)
chr2 (711-779)||(9634439-9634507)
chr2 (710-750)||(30416359-30416399)
chr2 (711-785)||(12358314-12358386)
chr2 (709-779)||(22888825-22888894)
chr2 (711-781)||(34913092-34913161)
chr2 (711-785)||(45420135-45420209)
chr2 (713-750)||(5962640-5962677)
chr2 (710-771)||(11965792-11965853)
chr2 (712-785)||(19109091-19109163)
[»] chr5 (34 HSPs)
chr5 (710-785)||(40829413-40829488)
chr5 (711-772)||(19981996-19982057)
chr5 (711-785)||(33958257-33958331)
chr5 (709-779)||(34124619-34124689)
chr5 (710-750)||(8681842-8681882)
chr5 (711-779)||(32912038-32912106)
chr5 (711-785)||(7076566-7076639)
chr5 (711-785)||(10865317-10865391)
chr5 (711-785)||(26686881-26686955)
chr5 (711-785)||(26956612-26956686)
chr5 (701-751)||(27005510-27005560)
chr5 (711-785)||(35075573-35075647)
chr5 (712-785)||(30103449-30103521)
chr5 (711-783)||(27340869-27340940)
chr5 (710-785)||(4719649-4719724)
chr5 (711-778)||(17097806-17097873)
chr5 (711-770)||(19844321-19844380)
chr5 (710-785)||(21155986-21156061)
chr5 (710-785)||(22098254-22098329)
chr5 (710-785)||(30420625-30420699)
chr5 (711-785)||(2429010-2429084)
chr5 (711-777)||(6940155-6940221)
chr5 (711-785)||(11148511-11148585)
chr5 (711-785)||(19839983-19840057)
chr5 (711-785)||(22649659-22649732)
chr5 (711-785)||(27546063-27546137)
chr5 (711-785)||(31626074-31626147)
chr5 (711-785)||(33598963-33599036)
chr5 (711-781)||(38493625-38493694)
chr5 (713-771)||(39195719-39195777)
chr5 (708-785)||(16690496-16690573)
chr5 (702-735)||(27440470-27440503)
chr5 (711-780)||(34693219-34693287)
chr5 (708-785)||(38293356-38293433)
[»] chr4 (40 HSPs)
chr4 (711-785)||(31559538-31559612)
chr4 (711-780)||(39158105-39158174)
chr4 (701-780)||(14443189-14443267)
chr4 (710-780)||(149487-149557)
chr4 (711-785)||(7632459-7632533)
chr4 (711-785)||(40348794-40348867)
chr4 (711-780)||(2738270-2738339)
chr4 (711-780)||(50506393-50506462)
chr4 (711-783)||(31804329-31804400)
chr4 (713-769)||(32130249-32130305)
chr4 (709-785)||(36123457-36123533)
chr4 (710-785)||(1795979-1796054)
chr4 (710-785)||(31995913-31995988)
chr4 (710-780)||(7627847-7627917)
chr4 (711-785)||(19807416-19807489)
chr4 (711-785)||(44257727-44257801)
chr4 (711-785)||(44539736-44539809)
chr4 (711-785)||(56474761-56474835)
chr4 (712-785)||(27354352-27354424)
chr4 (710-783)||(35332705-35332777)
chr4 (711-771)||(29227254-29227314)
chr4 (709-785)||(42178048-42178123)
chr4 (709-785)||(52263876-52263952)
chr4 (714-785)||(16019479-16019550)
chr4 (711-778)||(50050638-50050704)
chr4 (709-780)||(55996420-55996490)
chr4 (711-785)||(21392570-21392644)
chr4 (711-785)||(27051084-27051157)
chr4 (711-785)||(29175227-29175300)
chr4 (711-785)||(31574937-31575011)
chr4 (711-785)||(32392217-32392290)
chr4 (711-777)||(32696794-32696860)
chr4 (711-785)||(45082981-45083054)
chr4 (707-785)||(46634096-46634173)
chr4 (711-785)||(50721742-50721816)
chr4 (711-785)||(50890071-50890144)
chr4 (712-785)||(336805-336877)
chr4 (708-741)||(12387695-12387728)
chr4 (711-780)||(35694596-35694663)
chr4 (711-780)||(40755921-40755989)
[»] chr1 (38 HSPs)
chr1 (701-785)||(12306131-12306215)
chr1 (710-785)||(49020401-49020476)
chr1 (711-785)||(30535991-30536065)
chr1 (710-783)||(45350095-45350167)
chr1 (709-780)||(5771750-5771821)
chr1 (713-772)||(32926261-32926320)
chr1 (708-780)||(47642609-47642681)
chr1 (711-783)||(48678953-48679024)
chr1 (709-785)||(49931551-49931627)
chr1 (710-753)||(45863750-45863793)
chr1 (710-780)||(40118718-40118787)
chr1 (711-785)||(52437494-52437568)
chr1 (712-753)||(1922454-1922495)
chr1 (709-774)||(42615858-42615922)
chr1 (714-785)||(18639703-18639772)
chr1 (708-772)||(33173701-33173765)
chr1 (715-782)||(2492417-2492484)
chr1 (711-778)||(4213072-4213139)
chr1 (711-782)||(11947795-11947866)
chr1 (711-785)||(35026891-35026963)
chr1 (710-780)||(40328743-40328814)
chr1 (711-785)||(9566958-9567032)
chr1 (711-785)||(12657222-12657295)
chr1 (711-785)||(15083048-15083121)
chr1 (711-749)||(23554751-23554789)
chr1 (711-785)||(31088181-31088254)
chr1 (711-777)||(36669376-36669441)
chr1 (711-785)||(37619544-37619617)
chr1 (714-760)||(45430802-45430848)
chr1 (711-785)||(46543439-46543513)
chr1 (715-785)||(48325226-48325295)
chr1 (711-785)||(49446795-49446869)
chr1 (715-785)||(50775154-50775224)
chr1 (712-785)||(3558847-3558920)
chr1 (711-752)||(26159441-26159482)
chr1 (711-780)||(27563484-27563552)
chr1 (700-785)||(42812875-42812959)
chr1 (711-780)||(44672033-44672101)
[»] chr8 (35 HSPs)
chr8 (710-785)||(28756534-28756609)
chr8 (710-778)||(45405988-45406056)
chr8 (714-785)||(37942904-37942975)
chr8 (711-785)||(6511857-6511931)
chr8 (711-778)||(4312548-4312615)
chr8 (710-777)||(5600992-5601059)
chr8 (710-777)||(5639561-5639628)
chr8 (711-785)||(5849563-5849637)
chr8 (711-785)||(10692439-10692512)
chr8 (711-785)||(45405531-45405605)
chr8 (708-785)||(25830243-25830320)
chr8 (708-785)||(31249522-31249598)
chr8 (709-777)||(22960422-22960490)
chr8 (711-771)||(28772135-28772195)
chr8 (712-780)||(44061718-44061786)
chr8 (714-785)||(3547157-3547228)
chr8 (709-780)||(13884163-13884233)
chr8 (708-783)||(14548823-14548897)
chr8 (710-785)||(14707341-14707416)
chr8 (711-778)||(15716980-15717047)
chr8 (714-785)||(33279546-33279617)
chr8 (710-749)||(41406889-41406928)
chr8 (714-749)||(41675402-41675437)
chr8 (710-785)||(42786657-42786732)
chr8 (711-785)||(7678732-7678805)
chr8 (711-781)||(12339159-12339229)
chr8 (711-785)||(12655922-12655996)
chr8 (711-785)||(21526278-21526352)
chr8 (711-785)||(32725778-32725851)
chr8 (711-785)||(35067160-35067234)
chr8 (711-785)||(38675603-38675677)
chr8 (711-785)||(43285960-43286034)
chr8 (711-748)||(7010685-7010722)
chr8 (712-785)||(10592278-10592351)
chr8 (710-783)||(40608512-40608584)
[»] chr7 (29 HSPs)
chr7 (711-785)||(47012567-47012641)
chr7 (709-785)||(49069247-49069323)
chr7 (711-770)||(37352110-37352169)
chr7 (714-783)||(31436422-31436490)
chr7 (711-772)||(46880902-46880963)
chr7 (710-785)||(1284413-1284489)
chr7 (704-783)||(6655615-6655694)
chr7 (714-785)||(24532940-24533011)
chr7 (705-784)||(42598206-42598285)
chr7 (707-785)||(6269362-6269440)
chr7 (707-781)||(6353721-6353794)
chr7 (711-785)||(18111609-18111683)
chr7 (710-780)||(34978295-34978365)
chr7 (716-785)||(21588923-21588991)
chr7 (712-785)||(23910248-23910321)
chr7 (718-783)||(29034108-29034172)
chr7 (714-785)||(23034058-23034129)
chr7 (714-773)||(27421898-27421957)
chr7 (710-785)||(31487189-31487264)
chr7 (714-785)||(38259066-38259137)
chr7 (714-785)||(44651226-44651297)
chr7 (711-785)||(20337310-20337384)
chr7 (710-780)||(31467259-31467329)
chr7 (711-785)||(42467204-42467277)
chr7 (707-749)||(49167888-49167930)
chr7 (714-783)||(3187177-3187245)
chr7 (372-429)||(27659235-27659292)
chr7 (711-780)||(28249572-28249641)
chr7 (712-785)||(41798221-41798293)
[»] scaffold0121 (1 HSPs)
scaffold0121 (701-785)||(3920-4004)
[»] scaffold0178 (1 HSPs)
scaffold0178 (710-785)||(9775-9850)
[»] chr3 (37 HSPs)
chr3 (710-785)||(52714732-52714807)
chr3 (711-785)||(19150316-19150390)
chr3 (711-785)||(50559209-50559283)
chr3 (707-785)||(51137033-51137111)
chr3 (702-785)||(6178423-6178505)
chr3 (711-750)||(39901591-39901630)
chr3 (710-785)||(51771437-51771511)
chr3 (710-785)||(52100260-52100334)
chr3 (711-785)||(48205045-48205118)
chr3 (711-785)||(52963313-52963387)
chr3 (711-780)||(41443193-41443262)
chr3 (711-780)||(53681111-53681180)
chr3 (709-749)||(32622396-32622436)
chr3 (707-779)||(32722148-32722220)
chr3 (709-785)||(42672234-42672310)
chr3 (705-785)||(48352990-48353070)
chr3 (710-753)||(9311039-9311082)
chr3 (714-785)||(35299870-35299941)
chr3 (714-785)||(42672832-42672903)
chr3 (711-785)||(349410-349484)
chr3 (701-735)||(5393881-5393915)
chr3 (711-785)||(22371191-22371265)
chr3 (711-785)||(24095403-24095477)
chr3 (711-781)||(26550237-26550307)
chr3 (711-749)||(27198193-27198231)
chr3 (711-785)||(33374492-33374566)
chr3 (711-785)||(36671012-36671085)
chr3 (711-785)||(48287671-48287745)
chr3 (711-785)||(49021711-49021785)
chr3 (715-785)||(50314628-50314698)
chr3 (710-783)||(1295331-1295403)
chr3 (702-779)||(3953478-3953555)
chr3 (711-772)||(27168692-27168753)
chr3 (711-780)||(29705903-29705971)
chr3 (710-779)||(37057061-37057130)
chr3 (712-749)||(40419675-40419712)
chr3 (711-780)||(44910697-44910765)
[»] chr6 (13 HSPs)
chr6 (711-781)||(9851303-9851372)
chr6 (711-781)||(32253780-32253849)
chr6 (711-779)||(2242025-2242093)
chr6 (711-785)||(11742980-11743053)
chr6 (712-785)||(5570331-5570403)
chr6 (709-780)||(27102113-27102183)
chr6 (709-780)||(27143935-27144005)
chr6 (710-785)||(31077792-31077866)
chr6 (703-781)||(5522639-5522717)
chr6 (711-785)||(16368044-16368118)
chr6 (701-771)||(18065101-18065171)
chr6 (711-780)||(8505776-8505845)
chr6 (711-780)||(10521126-10521194)
[»] scaffold0036 (1 HSPs)
scaffold0036 (711-781)||(18004-18073)
[»] scaffold0002 (1 HSPs)
scaffold0002 (718-780)||(469640-469702)
[»] scaffold0154 (1 HSPs)
scaffold0154 (711-772)||(9859-9919)


Alignment Details
Target: chr2 (Bit Score: 536; Significance: 0; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 536; E-Value: 0
Query Start/End: Original strand, 225 - 792
Target Start/End: Complemental strand, 21314041 - 21313474
Alignment:
Q  225 aaactgctattttattagcactgctttgaacccttttaattgtcctgataatattcttattggccatgtttggtaaaatttagttactagctaagaatgg 324  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21314041 aaactgctattttattatcactgctttgaacccttttaattgtcctgataatattcttattggccatgtttggtaaaatttagttaatagctaagaatgg 21313942  T
Q  325 gcgacaacagttttgagctgtcttagtttaatgtgctgtttgggttctgctatttttagtagtgctgctgtcttagggggtgttgggagtatttttctgc 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21313941 gcgacaacagttttgagctgtcttagtttaatgtgctgtttgggttctgctatttttagtagtgctgctgtcttagggggtgttgggagtatttttctgc 21313842  T
Q  425 ctgggaggcaagtctttgctgttttgtgaggcctgtttgtatctcctcaatcatgtcgagaatacgatgaacgttattccgagtaacattaacttacata 524  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21313841 ctgggaggcaagtctttgctgttttgtgaggcctgtttgtatctcctcaatcatgtcgagaatacgatgaacgttattccgagtaacattaacttacata 21313742  T
Q  525 tttcttttagtgcagctttaggctatgttaggtaacatagattagacaacttgtagtttattggactaacttataagctctagttttggtaaaatgacac 624  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21313741 tttcttttagtgcagctttaggctatgttaggtaacatagattagacaactggtagtttattggactaacttataagctctagttttggtaaaatgacac 21313642  T
Q  625 gtttggcaaccaacttttttgattgactgataaaatatttagatgttaattcaagtactgtaagctaacttatagctttttatattgagaaatgatattt 724  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21313641 gtttggcaaccaacttttttgattgactgataaattttttagatgttaattcaagtactgtaagctaatttatagctttttatattgagaaatgatattt 21313542  T
Q  725 gtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatattttgatgtcc 792  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  21313541 gtacaatcattctttgataatttttgtgatagttttttctctcatacttatattatatttttatgtcc 21313474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 21314248 - 21314106
Alignment:
Q  18 gtaacatcatggtttctaagtaaattcctttcaaaagtaatgtgtaacactttgttttttagcatttatgcatgtggggatgatttggatatgtagccac 117  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21314248 gtaacatcatggtttctaagtaaattcctttcaaaagtaatatgtaacactttgttttttagcatttatgcatgtggggatgatttggatatgtagccac 21314149  T
Q  118 tataggtagatgatcaaagggtatattgcatatgaatatgtga 160  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  21314148 tataggtagatgatcaaaaggtatattgcatatgaatatgtga 21314106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 710 - 785
Target Start/End: Complemental strand, 21738688 - 21738613
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||| |||| | | ||||||||||||||| |||| ||||||||||| ||||||||||||    
T  21738688 tgagaaatgatatttgtacaaccattttctaataatttttgtgataattttctctctcatactcacattatatttt 21738613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 40358183 - 40358109
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||| |||||  ||| ||| ||||||||||||| | |||||||||||||||||| ||||||||||    
T  40358183 gagaaatgatatttctacaactattttttaataatttttgtgacaattttttctctcatacttatattatatttt 40358109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 368 - 429
Target Start/End: Original strand, 25542590 - 25542651
Alignment:
Q  368 gttctgctatttttagtagtgctgctgtcttagggggtgttgggagtatttttctgcctggg 429  Q
    |||||||||| ||||||||  |||||||||||||| ||| ||||||||||||||||||||||    
T  25542590 gttctgctatctttagtagcactgctgtcttagggagtgctgggagtatttttctgcctggg 25542651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 710 - 785
Target Start/End: Original strand, 3771370 - 3771445
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||   ||| ||||||||| | ||||| ||||||    
T  3771370 tgagaaatgatatttgtacaatcattttttaataatttttgtgatgactttatctctcatagtcacattttatttt 3771445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 707 - 785
Target Start/End: Complemental strand, 29192726 - 29192649
Alignment:
Q  707 tattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||| ||||||||||||||||| |||| ||| ||||||||| ||||| |||| ||||| ||||||| ||||||||||    
T  29192726 tattgacaaatgatatttgtacaaccattttttaataattttt-tgataattttctctcttatacttatattatatttt 29192649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 43658781 - 43658707
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||||||||   | | || |||||||||| | |||||||||||||||| ||||||||||    
T  43658781 gagaaatgatatttgtacaatcatttcctaacaacttttgtgataatcttttctctcatacttatattatatttt 43658707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 779
Target Start/End: Complemental strand, 1416110 - 1416042
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatta 779  Q
    ||||||||||||||  | | ||||| | ||||||||||||||| | |||||||||||||||||||||||    
T  1416110 gagaaatgatatttaaatattcattttatgataatttttgtgacaattttttctctcatacttacatta 1416042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 785
Target Start/End: Complemental strand, 12784471 - 12784396
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||| |||| | | ||||||||||||| |  ||| ||||||||||| || |||||||||    
T  12784471 tgagaaatgatatttgtacaaccattttataataatttttgtgacaactttctctctcatactcacgttatatttt 12784396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 777
Target Start/End: Complemental strand, 7258633 - 7258567
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacat 777  Q
    ||||||||| ||||||||||||| ||||||| || |||||| | | |||| ||||||||||||||||    
T  7258633 gagaaatgacatttgtacaatcactctttgacaacttttgtaacaattttctctctcatacttacat 7258567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 17917389 - 17917462
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||| ||| ||| | ||||||| ||||| |||| ||||||||||| ||||||| ||||    
T  17917389 gagaaatgatatttgtacaattattttttaacaattttt-tgataattttctctctcatactcacattatctttt 17917462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 24766152 - 24766226
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||| |||| ||| |||| |||||||| |  ||| |||| |||||| ||||||||||||    
T  24766152 gagaaatgatatttgtacaaccattttttaataacttttgtgacaactttatctcgcatactcacattatatttt 24766226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 26290922 - 26290848
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||| |||||||||||| |||| ||| |||||||||||||||   || ||||| ||||| ||||||||||||    
T  26290922 gagaaattatatttgtacaaccattttttaataatttttgtgataaccttctctcttatactcacattatatttt 26290848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 784
Target Start/End: Complemental strand, 44287512 - 44287439
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatattt 784  Q
    |||||||||||||||| ||||  ||| ||| | || |||||||||| |||||||||||||||| |||||||||||    
T  44287512 tgagaaatgatatttgaacaactatttttt-acaacttttgtgataattttttctctcatactcacattatattt 44287439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 750
Target Start/End: Complemental strand, 5096025 - 5095985
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttg 750  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  5096025 tgagaaatgatatttgtacaatcattttgtgataatttttg 5095985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 714 - 785
Target Start/End: Original strand, 5361798 - 5361867
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||||| | | ||||||||  ||| | |||| ||||||||||| ||||||||||||    
T  5361798 aaatgatatttgtacaatcattttctaataatttt--tgacaattttctctctcatactcacattatatttt 5361867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 772
Target Start/End: Complemental strand, 7502498 - 7502438
Alignment:
Q  712 agaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatact 772  Q
    ||||||||||||||||||| |||| ||||| ||||||||||| |  ||| |||||||||||    
T  7502498 agaaatgatatttgtacaaccattttttgacaatttttgtgacaactttctctctcatact 7502438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 778
Target Start/End: Complemental strand, 7664141 - 7664073
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatt 778  Q
    |||||||||||||||| ||||| ||| || || |||||||||||||  ||| | |||||||||||||||    
T  7664141 tgagaaatgatatttgaacaattatttttggacaatttttgtgataactttctatctcatacttacatt 7664073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 709 - 781
Target Start/End: Original strand, 8427550 - 8427622
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattata 781  Q
    ||||||||||||||||| |||   ||| ||||| ||||||||||| |  ||| ||||||||||||||||||||    
T  8427550 ttgagaaatgatatttgaacatctattttttgacaatttttgtgacaactttctctctcatacttacattata 8427622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 711 - 779
Target Start/End: Complemental strand, 9634507 - 9634439
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatta 779  Q
    ||||||||||||||| |||  |||| | ||||||||||||||| |  ||||||||||||||| ||||||    
T  9634507 gagaaatgatatttgaacatccattttatgataatttttgtgacaactttttctctcatactcacatta 9634439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 750
Target Start/End: Original strand, 30416359 - 30416399
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttg 750  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  30416359 tgagaaatgatatttgtacaatcattttttgacaatttttg 30416399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 12358314 - 12358386
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||| |||||||||||| | ||| ||||||   |||| |||| |||||||||||||||| |||||||    
T  12358314 gagaaatgatatatgtacaatcattttgtgacaatttt--ggataattttctctctcatacttacatcatatttt 12358386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 779
Target Start/End: Complemental strand, 22888894 - 22888825
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatta 779  Q
    ||||||||||||||||| |||| |||| ||||| ||||||||||| |  ||| ||||||||||| ||||||    
T  22888894 ttgagaaatgatatttgaacaaccatt-tttgacaatttttgtgacaactttctctctcatactcacatta 22888825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 781
Target Start/End: Original strand, 34913092 - 34913161
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattata 781  Q
    ||||||||||||||||||||||||| ||| |||| ||||  ||||  ||| ||||||||||| ||||||||    
T  34913092 gagaaatgatatttgtacaatcattttttaataactttt-agataaatttctctctcatactcacattata 34913161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 45420135 - 45420209
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||| ||||||||||||| |||| ||| ||||||||| |||||  ||| | ||||||||| ||| ||||||||    
T  45420135 gagaaacgatatttgtacaaccattttttaataatttttatgataactttctatctcatactcacaatatatttt 45420209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 713 - 750
Target Start/End: Original strand, 5962640 - 5962677
Alignment:
Q  713 gaaatgatatttgtacaatcattctttgataatttttg 750  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  5962640 gaaatgatatttgtacaatcattatgtgataatttttg 5962677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 771
Target Start/End: Original strand, 11965792 - 11965853
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatac 771  Q
    |||||||||||||||| ||||||| | ||||| || |||||||| || ||| ||||||||||    
T  11965792 tgagaaatgatatttgaacaatcactttttgacaacttttgtgacagctttctctctcatac 11965853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 785
Target Start/End: Complemental strand, 19109163 - 19109091
Alignment:
Q  712 agaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||| ||||  ||| ||| | |||||||||||||  ||| ||||||||||||||||||| ||||    
T  19109163 agaaatgatatttgaacaactatttttt-acaatttttgtgataaatttctctctcatacttacattatctttt 19109091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 2e-20; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 710 - 785
Target Start/End: Original strand, 40829413 - 40829488
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||| | |||||||||||||||| ||||||||||||    
T  40829413 tgagaaatgatatttgtacaaccattttttaataatttttgtgacaattttttctctcatactcacattatatttt 40829488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 711 - 772
Target Start/End: Complemental strand, 19982057 - 19981996
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatact 772  Q
    ||||||||||||||  ||||||||| ||||||||||||||||| | ||||||||||||||||    
T  19982057 gagaaatgatattttaacaatcattttttgataatttttgtgacaattttttctctcatact 19981996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 33958331 - 33958257
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||  ||| | | ||||||| ||||||||||||    
T  33958331 gagaaatgatatttgaacaatcatttttggataatttttgtgataactttctatatcatactcacattatatttt 33958257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 709 - 779
Target Start/End: Original strand, 34124619 - 34124689
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatta 779  Q
    ||||||||||||||||| |||  |||| | ||||||||||||||||| |||| ||||||||||| ||||||    
T  34124619 ttgagaaatgatatttgaacatccattttatgataatttttgtgataattttctctctcatactcacatta 34124689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 710 - 750
Target Start/End: Original strand, 8681842 - 8681882
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttg 750  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  8681842 tgagaaatgatatttgtacaatcattttttgataatttttg 8681882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 779
Target Start/End: Original strand, 32912038 - 32912106
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatta 779  Q
    ||||||||||||||| ||| ||||| | ||||||||||||||| | |||| ||||||||||| ||||||    
T  32912038 gagaaatgatatttgaacattcattttatgataatttttgtgacaattttctctctcatactcacatta 32912106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 7076639 - 7076566
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||| | |||| ||||||||||| | ||||| ||||    
T  7076639 gagaaatgatatttgaacaatcatttttt-ataatttttgtgacaattttctctctcatactcatattatttttt 7076566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 10865317 - 10865391
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| |||| |||| | ||| || |||||||| | |||||| ||||||||||||||||| ||||    
T  10865317 gagaaatgatatttgaacaaacattttgtgagaacttttgtgacaattttttatctcatacttacattatgtttt 10865391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 26686881 - 26686955
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||| |||||| ||| ||| ||||||||||||| |  ||| ||||||||| | ||||||||||||    
T  26686881 gagaaatgatatttatacaattattttttaataatttttgtgacaactttctctctcatattcacattatatttt 26686955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 26956612 - 26956686
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||| |||||| ||| ||| ||||||||||||| |  ||| ||||||||| | ||||||||||||    
T  26956612 gagaaatgatatttatacaattattttttaataatttttgtgacaactttctctctcatattcacattatatttt 26956686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 701 - 751
Target Start/End: Complemental strand, 27005560 - 27005510
Alignment:
Q  701 tttttatattgagaaatgatatttgtacaatcattctttgataatttttgt 751  Q
    ||||||| | ||||||||||||||||||||| ||| |||||||||||||||    
T  27005560 tttttatgtagagaaatgatatttgtacaattattttttgataatttttgt 27005510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 35075647 - 35075573
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| ||||||||| ||||| || |  ||||| |  ||||||||||||||| ||||||||||||    
T  35075647 gagaaatgatatttgaacaatcattttttgacaactgatgtgacaactttttctctcatactcacattatatttt 35075573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 712 - 785
Target Start/End: Complemental strand, 30103521 - 30103449
Alignment:
Q  712 agaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||||||| ||  ||||||||||| | | |||| ||||||||| | ||||||||||||    
T  30103521 agaaatgatatttgtacaatcatttttgtataatttttgt-acaattttctctctcatattcacattatatttt 30103449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 711 - 783
Target Start/End: Original strand, 27340869 - 27340940
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatt 783  Q
    ||||||||||||||||||||||| | | | ||||||||| ||| | |||| ||||||||||| ||||||||||    
T  27340869 gagaaatgatatttgtacaatcactttattataattttt-tgacaattttctctctcatactcacattatatt 27340940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 785
Target Start/End: Original strand, 4719649 - 4719724
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||| || | ||||| || |||||||| |   |||||||||||||| ||||||| ||||    
T  4719649 tgagaaatgatatttgtacaaccaatttttgacaacttttgtgacaaccttttctctcatactcacattatgtttt 4719724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 778
Target Start/End: Complemental strand, 17097873 - 17097806
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatt 778  Q
    ||||||||||||||| |||| |||| |||||||| |||||||| | |||| | ||||||||| |||||    
T  17097873 gagaaatgatatttgaacaaccattttttgataacttttgtgacaattttctatctcatactcacatt 17097806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 770
Target Start/End: Complemental strand, 19844380 - 19844321
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcata 770  Q
    ||||||||||||||||||||  ||| |||||||| ||||||||||  ||| |||||||||    
T  19844380 gagaaatgatatttgtacaactattttttgataacttttgtgataactttctctctcata 19844321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 785
Target Start/End: Original strand, 21155986 - 21156061
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||| |||| |||| ||||| || |||||||| |  ||| ||| ||||||| ||||||||||||    
T  21155986 tgagaaatgatatttgaacaaccattttttgacaacttttgtgacacctttctctttcatactcacattatatttt 21156061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 785
Target Start/End: Original strand, 22098254 - 22098329
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||| |||| | | | || |||||||| |  ||| ||||||||||| ||||||||||||    
T  22098254 tgagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactcacattatatttt 22098329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 785
Target Start/End: Original strand, 30420625 - 30420699
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||  |||| | ||||||||||||| | | | || ||||||||||||||||||| ||||    
T  30420625 tgagaaatgatatttgtacatccattttatgataatttttgt-acaatcttctctctcatacttacattatctttt 30420699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 2429010 - 2429084
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||| |||||||||| ||| ||||||||||||| ||| |  ||| ||| ||||| || |||||||||||    
T  2429010 gagaaatgatttttgtacaattattttttgataatttttatgacaactttatctttcatatttgcattatatttt 2429084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 777
Target Start/End: Complemental strand, 6940221 - 6940155
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacat 777  Q
    |||||||||||||||||||| |||| | | ||||||||||||| |  ||| ||||||||||| ||||    
T  6940221 gagaaatgatatttgtacaaccattttataataatttttgtgacaactttctctctcatactcacat 6940155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 11148511 - 11148585
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||||| | ||||| || |||||||| |   || ||||||||||| ||||||| ||||    
T  11148511 gagaaatgatatttgtacaatcaatttttgacaacttttgtgacaacattctctctcatactcacattatgtttt 11148585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 19840057 - 19839983
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| ||| ||||| | ||| ||||||||||| |  ||| ||||||||||| ||||||| ||||    
T  19840057 gagaaatgatatttgaacattcattttatgacaatttttgtgacaactttctctctcatactcacattatttttt 19839983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 22649732 - 22649659
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| |||| |||| ||| | ||||||||||| | |||| ||||||||||| ||||||| ||||    
T  22649732 gagaaatgatatttgaacaaccatttttt-acaatttttgtgacaattttctctctcatactcacattatctttt 22649659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 27546063 - 27546137
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| ||||||||| | ||| || |||||||| |  ||| | ||||||||| ||||||||||||    
T  27546063 gagaaatgatatttgaacaatcattttatgacaaattttgtgacaactttatttctcatactcacattatatttt 27546137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 31626147 - 31626074
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||||||| |   ||||||||||| | |  ||||| ||||||||| ||||||||||||    
T  31626147 gagaaatgatatttgtacaatcattttggtataatttttgt-acaactttttatctcatactcacattatatttt 31626074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 33598963 - 33599036
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||   ||| |||||||||||||||||||  ||| | ||||||||| ||||||| ||||    
T  33598963 gagaaatgatatttgtacatgtatt-tttgataatttttgtgataactttctttctcatactcacattatgtttt 33599036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 781
Target Start/End: Original strand, 38493625 - 38493694
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattata 781  Q
    ||||||||||||||||||||| ||| | | |||| ||||||||||  ||| ||||||||||| ||||||||    
T  38493625 gagaaatgatatttgtacaataatt-tctaataacttttgtgataactttctctctcatactcacattata 38493694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 713 - 771
Target Start/End: Original strand, 39195719 - 39195777
Alignment:
Q  713 gaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatac 771  Q
    ||||||||||||| ||||||| | ||||||||||||||||| |  ||| ||||||||||    
T  39195719 gaaatgatatttgaacaatcactttttgataatttttgtgacaactttctctctcatac 39195777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 708 - 785
Target Start/End: Original strand, 16690496 - 16690573
Alignment:
Q  708 attgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||||| ||||  || | || |||||||| |  ||| ||| ||||||| ||||||||||||    
T  16690496 attgagaaatgatatttgtacaaccatttcttaacaacttttgtgacaactttctctttcatactcacattatatttt 16690573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 702 - 735
Target Start/End: Original strand, 27440470 - 27440503
Alignment:
Q  702 ttttatattgagaaatgatatttgtacaatcatt 735  Q
    ||||| ||||||||||||||||||||||||||||    
T  27440470 ttttagattgagaaatgatatttgtacaatcatt 27440503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 780
Target Start/End: Complemental strand, 34693287 - 34693219
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||||||||||||| ||  ||||||||||| | | | || ||||||||||| |||||||    
T  34693287 gagaaatgatatttgtacaatcatttttgtataatttttgt-acaatcttctctctcatactcacattat 34693219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 708 - 785
Target Start/End: Complemental strand, 38293433 - 38293356
Alignment:
Q  708 attgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||| ||||| |||| | | | ||||||||||| |  ||| ||| ||||||| ||||||||||||    
T  38293433 attgagaaatgatatttttacaaccattttataacaatttttgtgacaactttctctatcatactcacattatatttt 38293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 31559538 - 31559612
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||||||| |||||||||  |||||| | |||| ||||||||||| ||||||||||||    
T  31559538 gagaaatgatatttgtacaatcattttttgataatagttgtgacaattttctctctcatactcacattatatttt 31559612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 711 - 780
Target Start/End: Original strand, 39158105 - 39158174
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| |  ||| ||||||||||| |||||||    
T  39158105 gagaaatgatatttgaacaatcattttttgataatttttgtgacaactttctctctcatactcacattat 39158174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 701 - 780
Target Start/End: Original strand, 14443189 - 14443267
Alignment:
Q  701 tttttatattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||| ||||||||||||||| ||||||||| ||||| || |||||||| | |||| ||||||||||||| |||||    
T  14443189 tttttatat-gagaaatgatatttgaacaatcattttttgacaacttttgtgacaattttctctctcatacttatattat 14443267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 710 - 780
Target Start/End: Complemental strand, 149557 - 149487
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    |||||||||||||||| ||||||| | ||||||||||||||||| |  ||| ||||||||||| |||||||    
T  149557 tgagaaatgatatttgaacaatcactttttgataatttttgtgacaactttctctctcatactcacattat 149487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 7632533 - 7632459
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| ||||||| | ||||| || |||||||||| |||| ||| ||||||| ||||||||||||    
T  7632533 gagaaatgatatttgaacaatcaatttttgacaacttttgtgataattttctctttcatactcacattatatttt 7632459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 40348794 - 40348867
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||| | |||| ||||||||||| ||||||| ||||    
T  40348794 gagaaatgatatttgaacaatcatttttt-ataatttttgtgacaattttctctctcatactcacattatctttt 40348867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 711 - 780
Target Start/End: Complemental strand, 2738339 - 2738270
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||| ||||||||| ||||| |||||||||||||  ||| ||||||||| | |||||||    
T  2738339 gagaaatgatatttgaacaatcattttttgacaatttttgtgataactttctctctcatattcacattat 2738270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 711 - 780
Target Start/End: Original strand, 50506393 - 50506462
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||| |||| |||| |||||||||||||| |||| |||| ||||||||| | |||||||    
T  50506393 gagaaatgatatttgaacaaccattttttgataatttttgagataattttctctctcatattcacattat 50506462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 783
Target Start/End: Complemental strand, 31804400 - 31804329
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatt 783  Q
    ||||||||||||||||||||||| | | ||||||||||| ||||| |||| ||||||||||| | ||||||||    
T  31804400 gagaaatgatatttgtacaatcactttgtgataattttt-tgataattttctctctcatactcagattatatt 31804329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 713 - 769
Target Start/End: Complemental strand, 32130305 - 32130249
Alignment:
Q  713 gaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcat 769  Q
    ||||||||||||| |||| |||| ||||||||||||||||||| | |||||||||||    
T  32130305 gaaatgatatttgaacaaccattttttgataatttttgtgataatattttctctcat 32130249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 709 - 785
Target Start/End: Complemental strand, 36123533 - 36123457
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||||||||| | | | || |||| ||| |  ||| ||||||||||||||||||||||||    
T  36123533 ttgagaaatgatatttgtacaatcattttataacaacttttatgacaactttctctctcatacttacattatatttt 36123457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 785
Target Start/End: Complemental strand, 1796054 - 1795979
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||||  ||| ||| | || ||||||||||  ||| ||||||||||| ||||||||||||    
T  1796054 tgagaaatgatatttgtacaacaattttttaacaacttttgtgataactttatctctcatactcacattatatttt 1795979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 785
Target Start/End: Complemental strand, 31995988 - 31995913
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||||  ||| |||||||| |||||||||| |||| ||| ||||| ||| ||||| ||||    
T  31995988 tgagaaatgatatttgtacaactattttttgataaattttgtgataattttatctttcatatttatattatgtttt 31995913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 780
Target Start/End: Original strand, 7627847 - 7627917
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    |||||||||||||||| | | |||||   ||||||||||||||||| |||| ||||||||||| |||||||    
T  7627847 tgagaaatgatatttgaatattcatttaatgataatttttgtgataattttctctctcatactcacattat 7627917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 19807489 - 19807416
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||||||| ||  ||||| ||||| |||| ||| ||| ||||||||||||||| ||||    
T  19807489 gagaaatgatatttgtacaatcatttttatataatatttgt-atagctttctctatcatacttacattatctttt 19807416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 44257801 - 44257727
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||| |||||||| | | | ||||||||||| |  ||| ||||||||||| ||||||||||||    
T  44257801 gagaaatgatatttgtgcaatcattttctaacaatttttgtgacaactttctctctcatactcacattatatttt 44257727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 44539736 - 44539809
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| |||| |||| ||| |||||||||||||||  ||| ||||||||||||| ||||| ||||    
T  44539736 gagaaatgatatttgaacaaccatttttt-ataatttttgtgataactttctctctcatacttatattatctttt 44539809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 56474835 - 56474761
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| ||||||||| ||| | ||||||||||| | |||| ||||| ||||| ||||||| ||||    
T  56474835 gagaaatgatatttgaacaatcatttttttacaatttttgtgacaattttctctcttatactcacattatgtttt 56474761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 712 - 785
Target Start/End: Complemental strand, 27354424 - 27354352
Alignment:
Q  712 agaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||| ||||||||| |||||||| |||| |||||  ||| ||||||||||| ||||||| ||||    
T  27354424 agaaatgatatttgaacaatcatt-tttgataacttttatgataactttatctctcatactcacattatgtttt 27354352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 710 - 783
Target Start/End: Original strand, 35332705 - 35332777
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatt 783  Q
    ||||||||||||||||||||| || | | ||||||||||| |||||  ||| ||||||||||| ||||||||||    
T  35332705 tgagaaatgatatttgtacaaccactttatgataattttt-tgataactttctctctcatactcacattatatt 35332777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 711 - 771
Target Start/End: Complemental strand, 29227314 - 29227254
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatac 771  Q
    ||||||||||||||| |||| || | |||||||||||||||||||  ||| ||||||||||    
T  29227314 gagaaatgatatttgaacaaccactttttgataatttttgtgataactttctctctcatac 29227254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 709 - 785
Target Start/End: Complemental strand, 42178123 - 42178048
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||||||||| | ||| ||||||||  ||| |||| |||||||| || |||| |||||||    
T  42178123 ttgagaaatgatatttgtacaatcattatgtgacaatttttg-aataattttctctctcatgctcacatgatatttt 42178048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 709 - 785
Target Start/End: Complemental strand, 52263952 - 52263876
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||| ||||||||| |||||||||| ||||||||||||| | | |  ||| ||||||||||| | ||||||||||    
T  52263952 ttgagacatgatatttatacaatcattttttgataatttttataacaactttctctctcatactcatattatatttt 52263876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 785
Target Start/End: Original strand, 16019479 - 16019550
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||||| | | | || |||| ||| | |||||||| ||||||| ||||||||||||    
T  16019479 aaatgatatttgtacaatcattttctaacaacttttatgacaattttttctttcatactcacattatatttt 16019550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 778
Target Start/End: Original strand, 50050638 - 50050704
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatt 778  Q
    ||||||||||||||| ||||| ||| ||||| ||||||||||| | |||| ||||||||| |||||||    
T  50050638 gagaaatgatatttgaacaattatt-tttgacaatttttgtgacaattttctctctcatatttacatt 50050704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 780
Target Start/End: Original strand, 55996420 - 55996490
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||||||||||||||| | | | ||||||| ||| | |||| ||||||||||| |||||||    
T  55996420 ttgagaaatgatatttgtacaatcattttctaacaattttt-tgacaattttctctctcatactcacattat 55996490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 21392570 - 21392644
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| ||||||||| | | ||||||||||||| || ||| ||| ||||| ||| ||||| ||||    
T  21392570 gagaaatgatatttgaacaatcattttgtaataatttttgtgacagctttctctttcatatttatattatgtttt 21392644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 27051157 - 27051084
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||  |||| |||| ||| |||||||||||||||  ||| ||||||||||| ||||||| ||||    
T  27051157 gagaaatgatatttaaacaaccatttttt-ataatttttgtgataactttctctctcatactcacattatctttt 27051084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 29175227 - 29175300
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||| || ||||||||| ||| | ||||||||||| |  ||||||||||||||| ||||||| ||||    
T  29175227 gagaaatgatatatgaacaatcatttttt-acaatttttgtgacaactttttctctcatactcacattatctttt 29175300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 31575011 - 31574937
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||| |||| |||| || |||| | ||| || |||||||||| |||| ||||||||||| ||||||||||||    
T  31575011 gagaaataatatatgtataaccattttctgacaacttttgtgataattttctctctcatactcacattatatttt 31574937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 32392290 - 32392217
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||| |||||||  | ||||||||||||| ||| |||||| ||  ||||||||||||| ||||    
T  32392290 gagaaatgatatttgtgcaatcatattgtgataatttttgtaataatttttt-tcaaatacttacattatgtttt 32392217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 777
Target Start/End: Complemental strand, 32696860 - 32696794
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacat 777  Q
    |||||||||||||||||||| |||| | | | || |||||||||| |||| ||||||||||| ||||    
T  32696860 gagaaatgatatttgtacaaccattttctaacaacttttgtgataattttctctctcatactcacat 32696794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 45082981 - 45083054
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| |||| |||| ||||| || |||||||||| |||| ||||||||||| | ||||| ||||    
T  45082981 gagaaatgatatttgaacaaccatt-tttgacaacttttgtgataattttctctctcatactcaaattatctttt 45083054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 707 - 785
Target Start/End: Original strand, 46634096 - 46634173
Alignment:
Q  707 tattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||| ||||||||| ||| | || |||||||| |  ||| ||||||||||| ||||||| ||||    
T  46634096 tattgagaaatgatatttgaacaatcatt-ttttacaacttttgtgacaactttatctctcatactcacattatctttt 46634173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 50721816 - 50721742
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| |||| || | ||||| || ||||||||||  ||| ||| ||||||| ||||||||||||    
T  50721816 gagaaatgatatttgaacaaccaatttttgacaacttttgtgataactttctctttcatactcacattatatttt 50721742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 50890144 - 50890071
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||  ||| ||||| || |||||||| |  ||| ||||||||||| ||||||||||||    
T  50890144 gagaaatgatatttgtacaactatt-tttgacaacttttgtgacaactttctctctcatactcacattatatttt 50890071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 785
Target Start/End: Complemental strand, 336877 - 336805
Alignment:
Q  712 agaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||| ||| ||||| ||||||||||| |  ||| ||||||||| | ||||| ||||||    
T  336877 agaaatgatatttgtacaattatt-tttgacaatttttgtgacaactttctctctcatattcacattgtatttt 336805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 708 - 741
Target Start/End: Complemental strand, 12387728 - 12387695
Alignment:
Q  708 attgagaaatgatatttgtacaatcattctttga 741  Q
    |||||||||||||||||||||||||||| |||||    
T  12387728 attgagaaatgatatttgtacaatcattttttga 12387695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 780
Target Start/End: Complemental strand, 35694663 - 35694596
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||||||||| ||| ||| | || |||| ||||| |||||||||||||||| |||||||    
T  35694663 gagaaatgatatttgtacaat-attttttaacaactttt-tgataattttttctctcatactaacattat 35694596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 780
Target Start/End: Original strand, 40755921 - 40755989
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    |||||||||||||||||||| |||| | | | ||||||| ||||| |||| ||||||||||| |||||||    
T  40755921 gagaaatgatatttgtacaaccattttctaacaattttt-tgataattttctctctcatactcacattat 40755989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 701 - 785
Target Start/End: Complemental strand, 12306215 - 12306131
Alignment:
Q  701 tttttatattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||| ||| ||||||||||||||||||||| ||| | | | ||||||||||||| |||| ||| ||||||||||||||||||||    
T  12306215 tttttttatggagaaatgatatttgtacaattattttataacaatttttgtgataattttctctttcatacttacattatatttt 12306131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 710 - 785
Target Start/End: Complemental strand, 49020476 - 49020401
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||| |||| ||| | || |||||||| | |||||||||||||||| ||||||||||||    
T  49020476 tgagaaatgatatttgtacaaccattttttaacaacttttgtgacaattttttctctcatactcacattatatttt 49020401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 30535991 - 30536065
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||||||| ||| | ||||||||||| |  ||| ||||||||||| ||||||||||||    
T  30535991 gagaaatgatatttgtacaatcattttttaacaatttttgtgacaactttctctctcatactcacattatatttt 30536065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 710 - 783
Target Start/End: Complemental strand, 45350167 - 45350095
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatt 783  Q
    |||||||||||||||||||||| ||| | |||||||||||  |||| |||||||||||||||| ||||||||||    
T  45350167 tgagaaatgatatttgtacaattattttgtgataattttt-agataattttttctctcatactcacattatatt 45350095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 709 - 780
Target Start/End: Complemental strand, 5771821 - 5771750
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||||| ||||||| | ||||||||||||||||| |  ||| ||||||||||| |||||||    
T  5771821 ttgagaaatgatatttgaacaatcactttttgataatttttgtgacaactttctctctcatactcacattat 5771750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 713 - 772
Target Start/End: Original strand, 32926261 - 32926320
Alignment:
Q  713 gaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatact 772  Q
    ||||||||||||| ||||||||| | |||||| |||||||||| ||||||||||||||||    
T  32926261 gaaatgatatttgaacaatcattttatgataacttttgtgataattttttctctcatact 32926320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 708 - 780
Target Start/End: Complemental strand, 47642681 - 47642609
Alignment:
Q  708 attgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    |||||||||||||||||| |||| |||| |||||||| |||||||| |  ||| ||||||||||| |||||||    
T  47642681 attgagaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcatactcacattat 47642609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 783
Target Start/End: Complemental strand, 48679024 - 48678953
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatt 783  Q
    ||||||||||||||||||||||||| | ||| ||||||| ||||| || ||| |||||| |||||||||||||    
T  48679024 gagaaatgatatttgtacaatcattttatgacaattttt-tgataattatttttctcatgcttacattatatt 48678953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 709 - 785
Target Start/End: Original strand, 49931551 - 49931627
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||||||||| ||| | || |||||||| |  ||| ||||||||| | ||||||||||||    
T  49931551 ttgagaaatgatatttgtacaatcattttttaacaacttttgtgacaactttctctctcatattcacattatatttt 49931627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 753
Target Start/End: Complemental strand, 45863793 - 45863750
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtga 753  Q
    |||||||||||||||||||||| ||| |||||||||||||||||    
T  45863793 tgagaaatgatatttgtacaattattttttgataatttttgtga 45863750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 780
Target Start/End: Complemental strand, 40118787 - 40118718
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    |||||||||||||||||||||||||| ||  ||||||||||| | | |||| ||||||||||| |||||||    
T  40118787 tgagaaatgatatttgtacaatcatttttgtataatttttgt-acaattttctctctcatactcacattat 40118718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 52437494 - 52437568
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||| | ||||| |||| ||| ||||||||||||| |  ||| ||||||||||| ||||||||||||    
T  52437494 gagaaatgatatatatacaaccattttttaataatttttgtgacaactttctctctcatactcacattatatttt 52437568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 712 - 753
Target Start/End: Complemental strand, 1922495 - 1922454
Alignment:
Q  712 agaaatgatatttgtacaatcattctttgataatttttgtga 753  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  1922495 agaaatgatatttgtacaatcactttttgataatttttgtga 1922454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 709 - 774
Target Start/End: Original strand, 42615858 - 42615922
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatactta 774  Q
    ||||||||||||||||||||||||||| ||| ||||||||| ||| |  ||||||| |||||||||    
T  42615858 ttgagaaatgatatttgtacaatcattttttaataattttt-tgacaactttttctttcatactta 42615922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 714 - 785
Target Start/End: Complemental strand, 18639772 - 18639703
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||  ||| |||||||| ||||||||||   ||||||||| |||| ||||||||||||    
T  18639772 aaatgatatttgtacaacgattttttgataacttttgtgata--attttctctcttactcacattatatttt 18639703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 708 - 772
Target Start/End: Complemental strand, 33173765 - 33173701
Alignment:
Q  708 attgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatact 772  Q
    ||||| |||||||||||||||||| ||| ||| ||||||||||||| | |||||| | |||||||    
T  33173765 attgaaaaatgatatttgtacaattatttttttataatttttgtgacaattttttttttcatact 33173701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 715 - 782
Target Start/End: Original strand, 2492417 - 2492484
Alignment:
Q  715 aatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatat 782  Q
    |||||||||||||||| |||| | | | || |||||||||| |||| ||||||||||| |||||||||    
T  2492417 aatgatatttgtacaaccattttattacaacttttgtgataattttctctctcatactcacattatat 2492484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 778
Target Start/End: Original strand, 4213072 - 4213139
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatt 778  Q
    ||||||||||||||| |||| |||| |||||||| |||||||| |  ||| ||||||||||| |||||    
T  4213072 gagaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcatactcacatt 4213139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 782
Target Start/End: Original strand, 11947795 - 11947866
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatat 782  Q
    |||||||||||||||||||| |||| | ||| || |||||||| |  ||| ||||||||||| |||||||||    
T  11947795 gagaaatgatatttgtacaaccattttatgacaacttttgtgacaactttctctctcatactgacattatat 11947866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 35026891 - 35026963
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||| ||||||| | ||||||  ||||||| | |||||||||||||| | ||||||| ||||    
T  35026891 gagaaatgatatttgtataatcattttatgataa--tttgtgacaattttttctctcataatcacattatgtttt 35026963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 780
Target Start/End: Complemental strand, 40328814 - 40328743
Alignment:
Q  710 tgagaaatgatatttgtacaat-cattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    |||||||||||||||| ||||  | || ||| ||||||||||||||| |||| ||||||||||| |||||||    
T  40328814 tgagaaatgatatttgaacaacactttttttcataatttttgtgataattttctctctcatactcacattat 40328743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 9567032 - 9566958
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| |||| |||| ||||| || |||||||| |  ||| ||||||||||| ||||||| ||||    
T  9567032 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttctctctcatactcacattatgtttt 9566958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 12657222 - 12657295
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| ||||||||| ||| | |||||||| ||||  ||| ||||||||||| ||||||| ||||    
T  12657222 gagaaatgatatttgaacaatcatt-ttttacaatttttgagataactttctctctcatactcacattatctttt 12657295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 15083121 - 15083048
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| |||| |||| ||||| || |||||||| | |||| |||||||||||||| |||| ||||    
T  15083121 gagaaatgatatttgaacaaccatt-tttgacaacttttgtgacaattttctctctcatacttactttatctttt 15083048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 749
Target Start/End: Original strand, 23554751 - 23554789
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataattttt 749  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  23554751 gagaaatgatatttgtacaaccattttttgataattttt 23554789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 31088181 - 31088254
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||| ||||||| |||| |||| ||| |||| ||||||||||  ||||||||||||||| ||||||| ||||    
T  31088181 gagaaataatatttgaacaaccatttttt-ataacttttgtgataactttttctctcatactcacattatctttt 31088254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 777
Target Start/End: Complemental strand, 36669441 - 36669376
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacat 777  Q
    ||||||||||||||||||||||| | | ||||||||||||| | |  ||||||||||||||| ||||    
T  36669441 gagaaatgatatttgtacaatcaatttgtgataatttttgt-acaactttttctctcatactcacat 36669376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 37619544 - 37619617
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| |||| |||| |||||||| |||||||| |  ||| ||||||||||| ||||||| ||||    
T  37619544 gagaaatgatatttggacaaccatt-tttgataacttttgtgacaactttctctctcatactcacattatctttt 37619617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 714 - 760
Target Start/End: Original strand, 45430802 - 45430848
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagtttt 760  Q
    |||||||||||||||||| ||| ||| ||||||||||||||| ||||    
T  45430802 aaatgatatttgtacaattattttttaataatttttgtgataatttt 45430848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 46543513 - 46543439
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| |||  |||| | ||||||| ||||||||| |||| ||||||||||| ||| ||| ||||    
T  46543513 gagaaatgatatttgaacatccattttatgataatctttgtgataattttctctctcatactcacactatttttt 46543439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 715 - 785
Target Start/End: Original strand, 48325226 - 48325295
Alignment:
Q  715 aatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||| ||| ||| | |||||||  |||| |||| ||||||||||| ||||||||||||    
T  48325226 aatgatatttgtacaattattttttaacaattttta-gataattttctctctcatactcacattatatttt 48325295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 49446869 - 49446795
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||| || |||| | |   ||||||||||| |  ||| ||||||||||||||||||||||||    
T  49446869 gagaaatgatatttgtaaaaccattttgtaccaatttttgtgacaactttctctctcatacttacattatatttt 49446795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 715 - 785
Target Start/End: Complemental strand, 50775224 - 50775154
Alignment:
Q  715 aatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||| |||||| ||| ||||| ||||||||||| |  ||| ||||||||||| ||||||| ||||    
T  50775224 aatgatatttatacaattattttttgacaatttttgtgacaactttctctctcatactcacattatgtttt 50775154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 785
Target Start/End: Original strand, 3558847 - 3558920
Alignment:
Q  712 agaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||| |||||||| | ||||| || |||| |||||  ||| ||||||||||| ||||||| ||||    
T  3558847 agaaatgatatttatacaatcaatttttgacaacttttatgataactttctctctcatactcacattatgtttt 3558920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 752
Target Start/End: Original strand, 26159441 - 26159482
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtg 752  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||    
T  26159441 gagaaatgatatttgaacaatcattttttgacaatttttgtg 26159482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 780
Target Start/End: Original strand, 27563484 - 27563552
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||||||||||||| |   ||||||||| ||| | |||| ||||||||||| |||||||    
T  27563484 gagaaatgatatttgtacaatcattttgctataattttt-tgacaattttctctctcatactcacattat 27563552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 700 - 785
Target Start/End: Original strand, 42812875 - 42812959
Alignment:
Q  700 ctttttatattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||| |||| |||||||||||| |||||| |||| | | |||| |||||| | |  ||| ||||||||||||||||||||||||    
T  42812875 ctttttttattaagaaatgatatt-gtacaaccattttctcataacttttgttacaactttctctctcatacttacattatatttt 42812959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 780
Target Start/End: Complemental strand, 44672101 - 44672033
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||||||||||||| ||| | || |||| ||| | |||| ||||||||||| |||||||    
T  44672101 gagaaatgatatttgtacaatcattttttaacaactttt-tgacaattttctctctcatactcacattat 44672033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 710 - 785
Target Start/End: Original strand, 28756534 - 28756609
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||| |||||||| | | ||||||||||||| | |||| ||||||||||| ||||||||||||    
T  28756534 tgagaaatgatatttgtgcaatcattttataataatttttgtgacaattttatctctcatactcacattatatttt 28756609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 710 - 778
Target Start/End: Complemental strand, 45406056 - 45405988
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatt 778  Q
    |||||||||||||||| ||||  ||| ||| ||||||||||||||| |||||||||||||||| |||||    
T  45406056 tgagaaatgatatttgaacaactattttttaataatttttgtgataattttttctctcatactcacatt 45405988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 714 - 785
Target Start/End: Complemental strand, 37942975 - 37942904
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||| ||| ||||| ||||||||||| |  ||||||| ||||| ||||||||||||||    
T  37942975 aaatgatatttgtacaattattttttgacaatttttgtgacaactttttctttcatatttacattatatttt 37942904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 6511931 - 6511857
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||| |||||||| | |||||||| ||||||||||  ||| ||||||||||||| ||||| ||||    
T  6511931 gagaaatgatatttatacaatcactttttgataaattttgtgataactttctctctcatacttatattatgtttt 6511857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 711 - 778
Target Start/End: Original strand, 4312548 - 4312615
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatt 778  Q
    ||||||||||||||| ||||  ||| | |||||||||||||| ||||||||||| ||||| |||||||    
T  4312548 gagaaatgatatttgaacaactattttatgataatttttgtgttagttttttctttcatatttacatt 4312615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 777
Target Start/End: Complemental strand, 5601059 - 5600992
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacat 777  Q
    |||||||||||||||| |||| |||| ||||| || |||||||| | |||||||||||||||| ||||    
T  5601059 tgagaaatgatatttgaacaaccattttttgacaacttttgtgacaattttttctctcatactcacat 5600992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 777
Target Start/End: Original strand, 5639561 - 5639628
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacat 777  Q
    |||||||||||||||| |||| |||| ||||| || |||||||| | |||||||||||||||| ||||    
T  5639561 tgagaaatgatatttgaacaaccattttttgacaacttttgtgacaattttttctctcatactcacat 5639628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 5849637 - 5849563
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| |||| |||| |||||||| ||||||||||| ||| | ||||||| | | ||||||||||    
T  5849637 gagaaatgatatttgaacaaccattttttgataacttttgtgatagctttatatctcatattcatattatatttt 5849563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 10692439 - 10692512
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||| |  ||| ||||||||||| ||||||| ||||    
T  10692439 gagaaatgatatttgaacaatcatt-ttttataatttttgtgacaactttatctctcatactcacattatctttt 10692512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 45405531 - 45405605
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||| ||||||| |||| ||| ||||||||||||| |  ||||||| ||||| | ||||||||||||    
T  45405531 gagaaatgatatatgtacaaccattttttaataatttttgtgacaactttttctttcatattcacattatatttt 45405605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 708 - 785
Target Start/End: Complemental strand, 25830320 - 25830243
Alignment:
Q  708 attgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||||| |||| | | | || |||||||| |  ||| ||||||||||| ||||||||||||    
T  25830320 attgagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttctctctcatactcacattatatttt 25830243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 708 - 785
Target Start/End: Complemental strand, 31249598 - 31249522
Alignment:
Q  708 attgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||| |||| |||| ||| | || |||||||| | |||||||||||||||| ||||||| ||||    
T  31249598 attgagaaatgatatttgaacaaccatttttt-acaacttttgtgacaattttttctctcatactcacattatctttt 31249522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 709 - 777
Target Start/End: Complemental strand, 22960490 - 22960422
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacat 777  Q
    |||||||||||||||||||||| |||| |  |||||||| ||||| | |||| ||||||||||| ||||    
T  22960490 ttgagaaatgatatttgtacaaccattttaggataatttctgtgacaattttatctctcatactcacat 22960422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 711 - 771
Target Start/End: Complemental strand, 28772195 - 28772135
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatac 771  Q
    ||||||||||||||| |||| |||| ||||| |||||||||||||  ||| ||||||||||    
T  28772195 gagaaatgatatttgaacaaccattttttgacaatttttgtgataactttctctctcatac 28772135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 712 - 780
Target Start/End: Original strand, 44061718 - 44061786
Alignment:
Q  712 agaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    |||||||||||||| |||| |||| |||||||| |||||||| |  ||| ||||||||||| |||||||    
T  44061718 agaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcatactcacattat 44061786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 785
Target Start/End: Complemental strand, 3547228 - 3547157
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||| || | |||||||| |||||| | |  ||| ||||||||||||||||||| ||||    
T  3547228 aaatgatatttgtacaaccactttttgataacttttgtcacaactttatctctcatacttacattatgtttt 3547157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 780
Target Start/End: Complemental strand, 13884233 - 13884163
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||||||||||||||| ||||| ||  ||||||| |  ||| ||||||||||| |||||||    
T  13884233 ttgagaaatgatatttgtacaatcattttttgacaa-ctttgtgacaactttctctctcatactcacattat 13884163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 708 - 783
Target Start/End: Complemental strand, 14548897 - 14548823
Alignment:
Q  708 attgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatt 783  Q
    ||||||||||||||||||||||| |||| ||| |||||||||  || |  ||| ||||||||||| ||||||||||    
T  14548897 attgagaaatgatatttgtacaaccattttttaataattttt-agacaactttctctctcatactcacattatatt 14548823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 785
Target Start/End: Complemental strand, 14707416 - 14707341
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||| ||| ||||| ||||| || ||||||||||  ||| | ||||||| ||||||||| ||||    
T  14707416 tgagaaatgatatttgaacattcattttttgacaacttttgtgataactttctttctcatatttacattatttttt 14707341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 711 - 778
Target Start/End: Complemental strand, 15717047 - 15716980
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatt 778  Q
    ||||||||||||||| | ||||| | |||||||| |||||||| |  |||||||||||||| ||||||    
T  15717047 gagaaatgatatttgaataatcactttttgataacttttgtgacaactttttctctcatacatacatt 15716980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 785
Target Start/End: Complemental strand, 33279617 - 33279546
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||| ||||  || | || |||||||| |  ||| ||||||||||||||||||||||||    
T  33279617 aaatgatatttgtacaaccatttcttaacaacttttgtgacaactttatctctcatacttacattatatttt 33279546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 749
Target Start/End: Complemental strand, 41406928 - 41406889
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataattttt 749  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  41406928 tgagaaatgatatttgtacaatcattttttgacaattttt 41406889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 749
Target Start/End: Complemental strand, 41675437 - 41675402
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataattttt 749  Q
    |||||||||||||||||||||| |||||||||||||    
T  41675437 aaatgatatttgtacaatcattttttgataattttt 41675402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 785
Target Start/End: Complemental strand, 42786732 - 42786657
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||| |||| | | | ||||||||||| |  ||| ||||| ||||| ||||||||||||    
T  42786732 tgagaaatgatatttgtacaaccattttcttacaatttttgtgacaactttctctcttatactcacattatatttt 42786657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 7678732 - 7678805
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||| || | ||||| || ||| |||| | |||| ||||||||||| ||||||||||||    
T  7678732 gagaaatgatatttgtacaaccactttttgacaacttt-gtgacaattttctctctcatactcacattatatttt 7678805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 781
Target Start/End: Complemental strand, 12339229 - 12339159
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattata 781  Q
    |||||| |||||||||||||||||| ||| |||| |||| ||| | |||| ||| | ||||||||||||||    
T  12339229 gagaaacgatatttgtacaatcattttttaataaattttatgacaattttctctgttatacttacattata 12339159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 12655922 - 12655996
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||| |||| | | |||| |||||| |||  ||||||||||||| | | ||||||||||    
T  12655922 gagaaatgatatttgtacaaccattttataataacttttgtaataactttttctctcatattcatattatatttt 12655996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 21526352 - 21526278
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||| || | ||| | || |||||| | |||||| ||||||||||| ||||||| ||||    
T  21526352 gagaaatgatatttgtacaaccactttttaacaacttttgtaacagttttctctctcatactcacattatgtttt 21526278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 32725851 - 32725778
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||| || | | |||||||||||  || | |||||||||||||||| |||| |||||||    
T  32725851 gagaaatgatatttgtacaaccactttgtgataattttt-agacaattttttctctcatactcacatcatatttt 32725778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 35067160 - 35067234
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||| ||||  || | || |||||||| |  ||| ||||||||||| ||||||||||||    
T  35067160 gagaaatgatatttgtacaaccatttcttaacaacttttgtgacaactttctctctcatactcacattatatttt 35067234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 38675603 - 38675677
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||| |||| ||  ||||||||| ||| |  ||| ||||||||||  ||||||||||||    
T  38675603 gagaaatgatatttgtacaaccatttttctataatttttatgacaactttctctctcatacccacattatatttt 38675677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 43286034 - 43285960
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| |||| |||| | | |||| |||||||| |  ||| ||||||||||| ||||||||||||    
T  43286034 gagaaatgatatttggacaaccattttctaataacttttgtgacaactttctctctcatactcacattatatttt 43285960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 748
Target Start/End: Original strand, 7010685 - 7010722
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttt 748  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  7010685 gagaaatgatatttgtacaatcattttttgacaatttt 7010722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 785
Target Start/End: Complemental strand, 10592351 - 10592278
Alignment:
Q  712 agaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||| | |||||||||| |||||||| |||||||| |  ||| ||||||||| ||| ||||| ||||    
T  10592351 agaaatgatatctttacaatcattttttgataacttttgtgacaactttctctctcatatttatattatgtttt 10592278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 783
Target Start/End: Original strand, 40608512 - 40608584
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatt 783  Q
    |||||||||||||||||||||||| | | | | ||||||| ||| | |||||||||||||||| ||| ||||||    
T  40608512 tgagaaatgatatttgtacaatcaatttctaacaattttt-tgacaattttttctctcatactcacaatatatt 40608584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 47012641 - 47012567
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||||||| | | ||||||||||||| | |||| ||||||||| | ||||||||||||    
T  47012641 gagaaatgatatttgtacaatcattttctaataatttttgtgacaattttatctctcatattcacattatatttt 47012567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 709 - 785
Target Start/End: Original strand, 49069247 - 49069323
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||||| || | ||||| || |||||||||| |||| ||||||||| ||||||||| ||||    
T  49069247 ttgagaaatgatatttgtacaaccactttttgacaacttttgtgataattttctctctcatatttacattatgtttt 49069323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 711 - 770
Target Start/End: Original strand, 37352110 - 37352169
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcata 770  Q
    ||||||||||||||| |||| |||| ||||| ||||||||||||| ||||||||||||||    
T  37352110 gagaaatgatatttgaacaaccattttttgacaatttttgtgataattttttctctcata 37352169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 714 - 783
Target Start/End: Original strand, 31436422 - 31436490
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatt 783  Q
    ||||||||||||||||| |||| ||||| || |||| ||| | |||||||||||||||||||||||||||    
T  31436422 aaatgatatttgtacaaccattttttgacaactttt-tgacaattttttctctcatacttacattatatt 31436490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 711 - 772
Target Start/End: Original strand, 46880902 - 46880963
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatact 772  Q
    ||||||||||||||| |||| |||| |||||||||||||| |||| |||| |||||||||||    
T  46880902 gagaaatgatatttgaacaaccattttttgataatttttgcgataattttctctctcatact 46880963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 710 - 785
Target Start/End: Original strand, 1284413 - 1284489
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataa-tttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||| ||||||||||||||||| |||||||| |||||||||||  ||| | | ||||||||||||||| ||||    
T  1284413 tgagaaataatatttgtacaatcattttttgataattttttgtgataactttctttttcatacttacattatgtttt 1284489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 704 - 783
Target Start/End: Complemental strand, 6655694 - 6655615
Alignment:
Q  704 ttatattgagaaatgatatttgtacaatcattctttgataatttttgtgat-agttttttctctcatacttacattatatt 783  Q
    ||||| |||||||||||||||||| ||||||| | |||||||||||  ||| | |||||||||||||||| ||||||||||    
T  6655694 ttataatgagaaatgatatttgtaaaatcattttgtgataattttt-agataatttttttctctcatactcacattatatt 6655615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 714 - 785
Target Start/End: Complemental strand, 24533011 - 24532940
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||| ||||  ||| | ||||||||||||||| | |||||||||||||||| ||||||| ||||    
T  24533011 aaatgatatttgaacaactattttctgataatttttgtgacaattttttctctcatactcacattatgtttt 24532940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 705 - 784
Target Start/End: Complemental strand, 42598285 - 42598206
Alignment:
Q  705 tatattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatattt 784  Q
    |||| |||||||||||||||||||||  ||| ||| | |||||||||||||  ||| ||||||||||| | |||||||||    
T  42598285 tataatgagaaatgatatttgtacaactattttttaacaatttttgtgataactttatctctcatactcatattatattt 42598206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 707 - 785
Target Start/End: Original strand, 6269362 - 6269440
Alignment:
Q  707 tattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||| ||||||||||||||||| |||| | | | ||||||||||| |  ||| ||||||||||| ||||||||||||    
T  6269362 tattgataaatgatatttgtacaaccattttataacaatttttgtgacaactttctctctcatactcacattatatttt 6269440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 707 - 781
Target Start/End: Original strand, 6353721 - 6353794
Alignment:
Q  707 tattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattata 781  Q
    |||||||||||||||||||||||| |||| ||||| || ||||||||||  ||| ||||||||| ||| ||||||    
T  6353721 tattgagaaatgatatttgtacaaccattttttgacaa-ttttgtgataactttctctctcatatttatattata 6353794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 18111683 - 18111609
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||| || ||||| |||| | | ||||||||||||| | |||| ||||||||||| ||||||||||||    
T  18111683 gagaaatgatacttctacaaccattttataataatttttgtgacaattttctctctcatactcacattatatttt 18111609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 710 - 780
Target Start/End: Original strand, 34978295 - 34978365
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    |||||||||||||||| ||||||| | ||||| ||||||||||| |  ||| ||||||||||| |||||||    
T  34978295 tgagaaatgatatttgaacaatcactttttgacaatttttgtgacaactttctctctcatactcacattat 34978365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 716 - 785
Target Start/End: Complemental strand, 21588991 - 21588923
Alignment:
Q  716 atgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||| ||| ||| |||| ||||  |||| |||| ||||||||||||||||||||||||    
T  21588991 atgatatttgtacaattattttttaataactttta-gataattttctctctcatacttacattatatttt 21588923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 712 - 785
Target Start/End: Complemental strand, 23910321 - 23910248
Alignment:
Q  712 agaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||| |||| ||||| || |||||||| | | |||||||||||| | ||||||| ||||    
T  23910321 agaaatgatatttgtacaaccattttttgacaacttttgtgacaatattttctctcatattcacattatgtttt 23910248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 718 - 783
Target Start/End: Original strand, 29034108 - 29034172
Alignment:
Q  718 gatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatt 783  Q
    |||||||||||||||||| | ||| ||||||| ||||| |||| ||||||||||| ||||||||||    
T  29034108 gatatttgtacaatcattttgtgacaattttt-tgataattttctctctcatactcacattatatt 29034172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 785
Target Start/End: Original strand, 23034058 - 23034129
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| |||||| | | |||| |||||||||| |||||| ||| |||||  |||||||||||    
T  23034058 aaatgatatttgtacgatcattttataataacttttgtgataattttttttcttatactcgcattatatttt 23034129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 773
Target Start/End: Complemental strand, 27421957 - 27421898
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatactt 773  Q
    |||||||||||  ||||||||| | |||||| |||||||||| |||||||| ||||||||    
T  27421957 aaatgatatttcaacaatcattttatgataaattttgtgataattttttctttcatactt 27421898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 785
Target Start/End: Original strand, 31487189 - 31487264
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||  ||||| ||| | ||||||||||| ||||| |||| ||||| ||| ||||||||| ||||    
T  31487189 tgagaaatgatatttcaacaattattttatgataatttttatgataattttctctcttatatttacattatgtttt 31487264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 785
Target Start/End: Original strand, 38259066 - 38259137
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||| |||| |||||||| |||||||| |  ||| ||| ||||||| ||||||| ||||    
T  38259066 aaatgatatttgtacaaccattttttgataacttttgtgacaactttctctttcatactaacattatgtttt 38259137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 785
Target Start/End: Complemental strand, 44651297 - 44651226
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||  ||||||| | | | ||||||| ||||| |||||||||  ||||||||||||||||||    
T  44651297 aaatgatatttgtctaatcattttctaacaatttttatgataattttttctcatatacttacattatatttt 44651226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 20337310 - 20337384
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||| ||||| || ||||||| | ||| ||||||| ||||| |||| ||||||||| | ||||||||||||    
T  20337310 gagaaatgttatttatataatcattttgtgacaatttttatgataattttctctctcatattcacattatatttt 20337384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 710 - 780
Target Start/End: Complemental strand, 31467329 - 31467259
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    |||||||||||||||||| ||| ||| ||| | ||||||||||| |  ||| | |||||||||||||||||    
T  31467329 tgagaaatgatatttgtataataatttttttacaatttttgtgacaactttctatctcatacttacattat 31467259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 42467204 - 42467277
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||| |||| ||| |||||||||  || || ||| || |||||||| ||||||||||||    
T  42467204 gagaaatgatatttgtacaaccattttttaataattttt-agacagctttctccctcatactcacattatatttt 42467277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 707 - 749
Target Start/End: Complemental strand, 49167930 - 49167888
Alignment:
Q  707 tattgagaaatgatatttgtacaatcattctttgataattttt 749  Q
    ||||||||||||||||||||||||| ||| | |||||||||||    
T  49167930 tattgagaaatgatatttgtacaattattttgtgataattttt 49167888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 714 - 783
Target Start/End: Original strand, 3187177 - 3187245
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatt 783  Q
    ||||||||| |||||||||||| | || |||||||||||||| |||| ||||||| ||| | ||||||||    
T  3187177 aaatgatatatgtacaatcattttatg-taatttttgtgataattttatctctcaaactcatattatatt 3187245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 27659235 - 27659292
Alignment:
Q  372 tgctatttttagtagtgctgctgtcttagggggtgttgggagtatttttctgcctggg 429  Q
    |||||| | ||||||||||||| | ||||||||||  |||||| ||||||||||||||    
T  27659235 tgctatctgtagtagtgctgctatattagggggtgcagggagtgtttttctgcctggg 27659292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 780
Target Start/End: Complemental strand, 28249641 - 28249572
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||| ||||| | | ||| ||||||||||| |||  ||||||||||||| | |||||||    
T  28249641 gagaaatgatatttgaacaattacttttttataatttttgttataactttttctctcatattcacattat 28249572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 785
Target Start/End: Original strand, 41798221 - 41798293
Alignment:
Q  712 agaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||| |||||| ||| ||  |||||||||  || | |||| ||||||||||||||||||||||||    
T  41798221 agaaatgatatttatacaataatttttaaataattttta-gacaattttctctctcatacttacattatatttt 41798293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 701 - 785
Target Start/End: Complemental strand, 4004 - 3920
Alignment:
Q  701 tttttatattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||| || || ||||||||||| |||||||||| | |||||||||||| |||| |||| ||||||||| ||||||| ||||||    
T  4004 tttttaaatagaaaaatgatatttatacaatcattttgtgataatttttgagataattttctctctcatatttacattgtatttt 3920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 710 - 785
Target Start/End: Original strand, 9775 - 9850
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||| |  ||| ||| ||||||||||||||| ||||    
T  9775 tgagaaatgatatttgtacaaccatttttttataatttttgtgacaactttctctttcatacttacattatttttt 9850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 710 - 785
Target Start/End: Original strand, 52714732 - 52714807
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||  |||| | | | |||||||||||||  ||| ||||||||||||||||||||||||    
T  52714732 tgagaaatgatatttgtacatccattttctaacaatttttgtgataactttctctctcatacttacattatatttt 52714807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 19150390 - 19150316
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||||||| ||| | || |||||||| |  ||| ||||||||| ||||||||||||||    
T  19150390 gagaaatgatatttgtacaatcattttttaacaacttttgtgacaactttctctctcatatttacattatatttt 19150316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 50559283 - 50559209
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||  ||| ||||| || |||||||| | |||| ||||||||||||||||||| ||||    
T  50559283 gagaaatgatatttgtacaactattttttgacaacttttgtgacaattttctctctcatacttacattatgtttt 50559209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 707 - 785
Target Start/End: Complemental strand, 51137111 - 51137033
Alignment:
Q  707 tattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||||||  ||| ||| |||| |||||||| |  ||||||||||| ||||||||||| ||||    
T  51137111 tattgagaaatgatatttgtacaactattttttaataacttttgtgacaactttttctctcagacttacattatgtttt 51137033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 702 - 785
Target Start/End: Complemental strand, 6178505 - 6178423
Alignment:
Q  702 ttttatattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||| |||||||||||||||||||||  ||| ||||| || |||||||| | |||| ||||||||||| ||||||| ||||    
T  6178505 ttttataatgagaaatgatatttgtacaactatt-tttgacaacttttgtgacaattttctctctcatactcacattatgtttt 6178423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 711 - 750
Target Start/End: Original strand, 39901591 - 39901630
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttg 750  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  39901591 gagaaatgatatttgtacaatcattttttgataatttttg 39901630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 785
Target Start/End: Complemental strand, 51771511 - 51771437
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||| |||| | | ||||||||| ||||| |||| ||||||||||| |||||| |||||    
T  51771511 tgagaaatgatatttgtacaaccattttgt-ataatttttttgataattttctctctcatactcacattacatttt 51771437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 785
Target Start/End: Original strand, 52100260 - 52100334
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||| |||| ||| ||||||||||| | |  ||| ||| ||||||||||||||||||||    
T  52100260 tgagaaatgatatttgtacaaccattttttaataatttttgt-acaactttctctttcatacttacattatatttt 52100334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 48205045 - 48205118
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||||||||||||| ||  ||||||||||| | | |||| ||||||||||| ||||||| ||||    
T  48205045 gagaaatgatatttgtacaatcatttttgtataatttttgt-acaattttctctctcatactcacattatctttt 48205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 52963387 - 52963313
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||| |||| ||| | || |||||||| | |||||||||||||| | | ||||||||||    
T  52963387 gagaaatgatatttgtacaaccattttttaacaacttttgtgacaattttttctctcatattcatattatatttt 52963313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 711 - 780
Target Start/End: Complemental strand, 41443262 - 41443193
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||| || |||| | ||||| || |||||||||| |||| ||||||||||| |||||||    
T  41443262 gagaaatgatatttgaacgatcactttttgacaacttttgtgataattttctctctcatactcacattat 41443193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 711 - 780
Target Start/End: Original strand, 53681111 - 53681180
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||| |||| || | ||| ||||||||||||||| |||| ||| ||||||| |||||||    
T  53681111 gagaaatgatatttgaacaaccactttttaataatttttgtgataattttctctttcatactcacattat 53681180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 709 - 749
Target Start/End: Complemental strand, 32622436 - 32622396
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataattttt 749  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  32622436 ttgagaaatgatatttatacaatcattttttgataattttt 32622396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 707 - 779
Target Start/End: Complemental strand, 32722220 - 32722148
Alignment:
Q  707 tattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatta 779  Q
    |||||||||||||||||||||||| |||| |  |||| |||| |||||| |||| | ||||||||| ||||||    
T  32722220 tattgagaaatgatatttgtacaaccattttgagatagttttagtgataattttctttctcatactcacatta 32722148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 709 - 785
Target Start/End: Original strand, 42672234 - 42672310
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||| ||||||||||| |||||||| | ||| ||||||||||||| |  ||| ||||| ||| ||||||||||||||    
T  42672234 ttgataaatgatatttatacaatcactttttaataatttttgtgacaactttatctcttatatttacattatatttt 42672310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 705 - 785
Target Start/End: Original strand, 48352990 - 48353070
Alignment:
Q  705 tatattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||||||||  |||| ||| | || |||||||| |  ||| ||||||||||| | ||||||||||    
T  48352990 tatattgagaaatgatatttgtacatccattttttaacaacttttgtgacaactttctctctcatactcatattatatttt 48353070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 753
Target Start/End: Original strand, 9311039 - 9311082
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtga 753  Q
    |||||||||||||||||||||||||| | ||||||| |||||||    
T  9311039 tgagaaatgatatttgtacaatcattttctgataatatttgtga 9311082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 785
Target Start/End: Complemental strand, 35299941 - 35299870
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||||| ||||| || |||| |||||  ||||||| ||||| ||  ||||||||||    
T  35299941 aaatgatatttgtacaatcattttttgacaacttttatgataactttttctttcatatttttattatatttt 35299870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 714 - 785
Target Start/End: Complemental strand, 42672903 - 42672832
Alignment:
Q  714 aaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||| ||||  ||| ||||||||||||||||| |  ||||||||||||| | ||||||| ||||    
T  42672903 aaatgatatttgcacaactattttttgataatttttgtgacaaatttttctctcatattcacattatgtttt 42672832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 349484 - 349410
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||| |||| | | ||||||||||||  |  ||| ||| |||||||||| |||||||||    
T  349484 gagaaatgatatttgtacaaccattttataataatttttgtggcaactttctctttcatacttaccttatatttt 349410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 701 - 735
Target Start/End: Complemental strand, 5393915 - 5393881
Alignment:
Q  701 tttttatattgagaaatgatatttgtacaatcatt 735  Q
    ||||| |||||||||||||||||||||||||||||    
T  5393915 tttttttattgagaaatgatatttgtacaatcatt 5393881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 22371191 - 22371265
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| |||  ||||   |||||| |||||| ||| |||| ||||||||||||||||||| ||||    
T  22371191 gagaaatgatatttgaacatccatttagtgataacttttgtaataattttctctctcatacttacattatttttt 22371265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 24095477 - 24095403
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| |||  |||| | ||||||||||||||| |  ||| ||||||||||| ||||||| ||||    
T  24095477 gagaaatgatatttgaacatccattttatgataatttttgtgacaactttctctctcatactcacattatttttt 24095403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 781
Target Start/End: Original strand, 26550237 - 26550307
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattata 781  Q
    ||||||||||||||| |||| |||| ||| ||||||||||||| |  ||| ||||||||| | ||||||||    
T  26550237 gagaaatgatatttgcacaaccattttttaataatttttgtgacaactttctctctcatattcacattata 26550307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 749
Target Start/End: Complemental strand, 27198231 - 27198193
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataattttt 749  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  27198231 gagaaatgatatttgtacaatcattttttgataactttt 27198193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 33374492 - 33374566
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| | || |||| | ||| ||||||| |||||  ||| ||||||||||| ||||||||||||    
T  33374492 gagaaatgatatttgaataaccattttatgacaatttttatgataactttctctctcatactcacattatatttt 33374566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 36671085 - 36671012
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||||||| |||| |||| ||| | ||||||||||| |  ||||||||||||||| ||||||| ||||    
T  36671085 gagaaatgatatttgaacaaccatttttt-acaatttttgtgacaactttttctctcatactcacattatctttt 36671012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 48287671 - 48287745
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||| |||| | | | || |||||||||| |||| | |||||| || ||||||||||||    
T  48287671 gagaaatgatatttgtacaaccattttataacaacttttgtgataattttctttctcattctcacattatatttt 48287745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Original strand, 49021711 - 49021785
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||  |||| ||| |||| |||||||| |  ||| | ||||||||| ||||||||||||    
T  49021711 gagaaatgatatttgtacatccattttttaataacttttgtgacaactttctttctcatactcacattatatttt 49021785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 715 - 785
Target Start/End: Original strand, 50314628 - 50314698
Alignment:
Q  715 aatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||||||| ||||||||| |||||||| ||||  || | |||| ||||||||||| ||||||| ||||    
T  50314628 aatgatatttgaacaatcattttttgataactttttcgacaattttctctctcatactcacattatgtttt 50314698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 783
Target Start/End: Original strand, 1295331 - 1295403
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatt 783  Q
    |||||||||||||||||||||  ||| | |||||| ||||| || |  ||||||||||||||| ||||||||||    
T  1295331 tgagaaatgatatttgtacaactattttgtgataacttttg-gacaactttttctctcatactcacattatatt 1295403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 702 - 779
Target Start/End: Complemental strand, 3953555 - 3953478
Alignment:
Q  702 ttttatattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatta 779  Q
    |||| ||||||||||||||||||| |||  | || | ||||||||||||||| |  ||| ||||||||||| ||||||    
T  3953555 ttttctattgagaaatgatatttgaacatcccttttatgataatttttgtgacaactttctctctcatactcacatta 3953478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 772
Target Start/End: Complemental strand, 27168753 - 27168692
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatact 772  Q
    ||||||||||||||| |||| |||| ||| ||||||||||||| |  ||| |||||||||||    
T  27168753 gagaaatgatatttgaacaaccattttttaataatttttgtgacaactttctctctcatact 27168692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 780
Target Start/End: Original strand, 29705903 - 29705971
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    |||||||||||||| |||||| ||| | ||||||||||| ||||| |||| ||| ||||||| |||||||    
T  29705903 gagaaatgatatttatacaattattttgtgataattttt-tgataattttctctttcatactcacattat 29705971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 779
Target Start/End: Complemental strand, 37057130 - 37057061
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatta 779  Q
    |||||||| ||||||| |||| |||| ||||||||||||| ||| | |||| ||||||||  ||||||||    
T  37057130 tgagaaataatatttgaacaaccattttttgataatttttatgacaattttctctctcatgtttacatta 37057061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 712 - 749
Target Start/End: Complemental strand, 40419712 - 40419675
Alignment:
Q  712 agaaatgatatttgtacaatcattctttgataattttt 749  Q
    |||||||||||||||||||||||| | |||||||||||    
T  40419712 agaaatgatatttgtacaatcattttgtgataattttt 40419675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 780
Target Start/End: Original strand, 44910697 - 44910765
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||||||| ||||| | |||||| |||||| ||| | || ||||||||||| |||||||    
T  44910697 gagaaatgatatttgtacattcattttatgataacttttgt-ataatcttctctctcatactcacattat 44910765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.000000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 781
Target Start/End: Complemental strand, 9851372 - 9851303
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattata 781  Q
    ||||||||| ||||||||||||||| | ||||||| ||| ||||| |||||||||||||||| ||||||||    
T  9851372 gagaaatgaaatttgtacaatcattttgtgataatattt-tgataattttttctctcatactcacattata 9851303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 781
Target Start/End: Original strand, 32253780 - 32253849
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattata 781  Q
    |||||||||||||||||||| || | |||||||| |||||||||| |||| ||||||||||| ||||||||    
T  32253780 gagaaatgatatttgtacaaccactttttgataa-ttttgtgataattttctctctcatactcacattata 32253849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 711 - 779
Target Start/End: Complemental strand, 2242093 - 2242025
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacatta 779  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||| |  ||| ||||||||||| ||||||    
T  2242093 gagaaatgatatttgaacaatcattttttgacaatttttgtgacaactttctctctcatactcacatta 2242025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 11743053 - 11742980
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    ||||||| ||||||||||||  ||| |||||||||||||  || | |||||||||||||||| ||||||||||||    
T  11743053 gagaaataatatttgtacaactattttttgataattttta-gacaattttttctctcatactcacattatatttt 11742980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 712 - 785
Target Start/End: Complemental strand, 5570403 - 5570331
Alignment:
Q  712 agaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||| |||| |||| ||| | ||||||||||| | |||| ||||||||||| ||||||||||||    
T  5570403 agaaatgatatttgaacaaccatttttt-acaatttttgtgacaattttctctctcatactcacattatatttt 5570331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 780
Target Start/End: Original strand, 27102113 - 27102183
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    |||||||||||||||||||||| |||| | | ||||||||| ||| | |||||||||| ||||||| |||||    
T  27102113 ttgagaaatgatatttgtacaaccattttctaataattttt-tgacaattttttctcttatacttatattat 27102183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 780
Target Start/End: Original strand, 27143935 - 27144005
Alignment:
Q  709 ttgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    |||||||||||||||||||||| |||| | | ||||||||| ||| | |||||||||| ||||||| |||||    
T  27143935 ttgagaaatgatatttgtacaaccattttctaataattttt-tgacaattttttctcttatacttatattat 27144005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 710 - 785
Target Start/End: Original strand, 31077792 - 31077866
Alignment:
Q  710 tgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||| ||||||||| ||| |||| |||||||| |  ||| |||||||||||||| |||| ||||    
T  31077792 tgagaaatgatatttgaacaatcatt-ttttataaattttgtgacaactttctctctcatacttacgttatctttt 31077866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 703 - 781
Target Start/End: Complemental strand, 5522717 - 5522639
Alignment:
Q  703 tttatattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattata 781  Q
    ||||| |||| |||||||||||| ||| ||||  ||||||||||||||||| |  ||| ||||||||| | ||||||||    
T  5522717 tttattttgaaaaatgatatttgaacattcatcttttgataatttttgtgacaactttatctctcatattcacattata 5522639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 785
Target Start/End: Complemental strand, 16368118 - 16368044
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattatatttt 785  Q
    |||||||||||||||||||| |||| | | ||||||||||| | |  ||| | ||||||||| ||||||||||||    
T  16368118 gagaaatgatatttgtacaaccattttataataatttttgtaacaactttctttctcatactcacattatatttt 16368044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 701 - 771
Target Start/End: Complemental strand, 18065171 - 18065101
Alignment:
Q  701 tttttatattgagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatac 771  Q
    |||||||  |||||||||||||||| ||||||| | ||||| || |||||||| |  ||||||||||||||    
T  18065171 tttttattatgagaaatgatatttgaacaatcactttttgacaacttttgtgacaactttttctctcatac 18065101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 780
Target Start/End: Complemental strand, 8505845 - 8505776
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||| ||||||||| ||||| || |||||||| |  ||| ||||||||| | |||||||    
T  8505845 gagaaatgatatttgaacaatcattttttgacaacttttgtgacaactttctctctcatattcacattat 8505776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 780
Target Start/End: Original strand, 10521126 - 10521194
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||||||||||| | | | |||||| |||| ||||| |||| ||||||||||| |||||||    
T  10521126 gagaaatgatatttgtacaattactttgtgataactttt-tgataattttatctctcatactcacattat 10521194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 711 - 781
Target Start/End: Original strand, 18004 - 18073
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattata 781  Q
    ||||||||||||||| ||||| ||| ||||| || ||| |||| | |||| ||||||||||||||||||||    
T  18004 gagaaatgatatttggacaattattttttgacaacttt-gtgacaattttctctctcatacttacattata 18073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 718 - 780
Target Start/End: Complemental strand, 469702 - 469640
Alignment:
Q  718 gatatttgtacaatcattctttgataatttttgtgatagttttttctctcatacttacattat 780  Q
    ||||||||||||| |||| ||||||||||||||||| |  ||| ||||||| ||| |||||||    
T  469702 gatatttgtacaaccattttttgataatttttgtgacaactttctctctcacactcacattat 469640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 711 - 772
Target Start/End: Complemental strand, 9919 - 9859
Alignment:
Q  711 gagaaatgatatttgtacaatcattctttgataatttttgtgatagttttttctctcatact 772  Q
    ||||||||||||||||||||||||| ||| | ||||||| ||| | |||| |||||||||||    
T  9919 gagaaatgatatttgtacaatcattttttcacaattttt-tgacaattttctctctcatact 9859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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