View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11543_low_6 (Length: 630)

Name: NF11543_low_6
Description: NF11543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11543_low_6
NF11543_low_6
[»] chr3 (39 HSPs)
chr3 (11-614)||(45236485-45237088)
chr3 (258-351)||(51448004-51448097)
chr3 (264-350)||(26490212-26490298)
chr3 (258-344)||(52138701-52138787)
chr3 (265-350)||(345013-345098)
chr3 (258-351)||(25191273-25191366)
chr3 (258-351)||(28245331-28245424)
chr3 (263-351)||(38849988-38850076)
chr3 (258-351)||(33272323-33272416)
chr3 (258-350)||(5168723-5168815)
chr3 (258-322)||(47233891-47233955)
chr3 (258-350)||(53519481-53519573)
chr3 (258-350)||(54128273-54128365)
chr3 (265-351)||(2341016-2341102)
chr3 (264-322)||(36820260-36820318)
chr3 (267-340)||(42510315-42510388)
chr3 (258-350)||(45728041-45728133)
chr3 (264-316)||(46431972-46432024)
chr3 (284-348)||(50249278-50249342)
chr3 (258-328)||(54278937-54279007)
chr3 (258-323)||(21995-22060)
chr3 (285-350)||(653859-653924)
chr3 (265-314)||(38054639-38054688)
chr3 (266-350)||(29919199-29919283)
chr3 (266-350)||(29968352-29968436)
chr3 (284-328)||(47542033-47542077)
chr3 (258-322)||(49841534-49841598)
chr3 (263-350)||(23534869-23534956)
chr3 (269-315)||(19736926-19736972)
chr3 (258-312)||(26388414-26388468)
chr3 (268-350)||(43308461-43308543)
chr3 (258-328)||(46568033-46568103)
chr3 (266-315)||(29928585-29928634)
chr3 (266-315)||(29977739-29977788)
chr3 (366-411)||(37788794-37788839)
chr3 (284-349)||(43695086-43695151)
chr3 (262-303)||(45289393-45289434)
chr3 (365-420)||(2128341-2128397)
chr3 (258-302)||(39600976-39601020)
[»] chr2 (32 HSPs)
chr2 (262-612)||(7824976-7825341)
chr2 (11-121)||(7829972-7830082)
chr2 (266-344)||(45077649-45077727)
chr2 (258-350)||(38429779-38429871)
chr2 (258-350)||(41763336-41763428)
chr2 (258-351)||(2610422-2610515)
chr2 (258-351)||(3865966-3866059)
chr2 (258-351)||(8180674-8180767)
chr2 (258-351)||(11992401-11992494)
chr2 (261-350)||(16097288-16097377)
chr2 (262-351)||(36183345-36183434)
chr2 (258-350)||(41197523-41197615)
chr2 (258-317)||(9556663-9556722)
chr2 (284-350)||(23714579-23714645)
chr2 (284-350)||(24102251-24102317)
chr2 (258-323)||(12734623-12734688)
chr2 (263-328)||(42092436-42092501)
chr2 (288-351)||(19337174-19337237)
chr2 (266-328)||(9647908-9647970)
chr2 (258-351)||(3243946-3244039)
chr2 (258-317)||(38452984-38453043)
chr2 (270-351)||(451929-452010)
chr2 (278-315)||(4598879-4598916)
chr2 (258-351)||(4807486-4807579)
chr2 (258-322)||(18188706-18188769)
chr2 (258-322)||(19527833-19527897)
chr2 (258-350)||(21834449-21834540)
chr2 (258-350)||(45367919-45368011)
chr2 (261-351)||(24583904-24583994)
chr2 (258-328)||(38434868-38434938)
chr2 (193-234)||(7825355-7825396)
chr2 (258-351)||(23997511-23997604)
[»] scaffold0018 (2 HSPs)
scaffold0018 (258-351)||(31362-31455)
scaffold0018 (285-349)||(44193-44257)
[»] chr4 (51 HSPs)
chr4 (258-350)||(45205143-45205235)
chr4 (258-351)||(31960109-31960202)
chr4 (258-351)||(12494644-12494737)
chr4 (263-350)||(11389615-11389704)
chr4 (258-351)||(4440749-4440842)
chr4 (258-351)||(23906596-23906689)
chr4 (261-350)||(35690199-35690288)
chr4 (258-351)||(43433812-43433905)
chr4 (258-351)||(48174388-48174481)
chr4 (258-351)||(48622836-48622929)
chr4 (258-351)||(50286865-50286958)
chr4 (258-351)||(52569810-52569903)
chr4 (264-340)||(17900385-17900461)
chr4 (258-317)||(2588909-2588968)
chr4 (258-328)||(20105766-20105836)
chr4 (258-328)||(56375207-56375277)
chr4 (258-351)||(436123-436216)
chr4 (258-351)||(1777310-1777403)
chr4 (258-351)||(33191143-33191236)
chr4 (284-341)||(33709823-33709880)
chr4 (258-351)||(53707688-53707781)
chr4 (258-350)||(1211685-1211777)
chr4 (258-350)||(31458923-31459015)
chr4 (284-350)||(27450494-27450560)
chr4 (258-351)||(33227103-33227196)
chr4 (258-351)||(47265497-47265590)
chr4 (258-323)||(54470129-54470194)
chr4 (258-314)||(37797783-37797839)
chr4 (258-314)||(43070059-43070115)
chr4 (258-322)||(45423542-45423606)
chr4 (258-346)||(49987327-49987415)
chr4 (258-341)||(31403315-31403398)
chr4 (284-350)||(30853311-30853377)
chr4 (269-350)||(7092525-7092606)
chr4 (264-317)||(25967568-25967621)
chr4 (258-351)||(46583119-46583212)
chr4 (258-350)||(1793355-1793447)
chr4 (258-350)||(41009645-41009737)
chr4 (258-317)||(21106912-21106971)
chr4 (266-317)||(44860782-44860833)
chr4 (258-349)||(45185312-45185403)
chr4 (265-323)||(25755239-25755297)
chr4 (258-352)||(28236078-28236172)
chr4 (258-315)||(18966483-18966540)
chr4 (258-351)||(27983094-27983187)
chr4 (265-350)||(40933198-40933283)
chr4 (263-316)||(41192763-41192816)
chr4 (258-306)||(10208977-10209025)
chr4 (258-314)||(17668406-17668462)
chr4 (266-350)||(22421011-22421095)
chr4 (284-316)||(49739115-49739147)
[»] chr7 (44 HSPs)
chr7 (258-351)||(11593854-11593947)
chr7 (258-351)||(35906496-35906589)
chr7 (258-351)||(31005117-31005210)
chr7 (258-351)||(36651888-36651981)
chr7 (258-351)||(34869314-34869407)
chr7 (258-351)||(37617838-37617931)
chr7 (269-350)||(47848569-47848650)
chr7 (258-351)||(49029170-49029263)
chr7 (258-349)||(13859303-13859392)
chr7 (258-350)||(36514500-36514592)
chr7 (266-350)||(42187366-42187449)
chr7 (258-341)||(30200254-30200337)
chr7 (258-344)||(39811858-39811944)
chr7 (285-350)||(25579393-25579458)
chr7 (258-351)||(33072848-33072941)
chr7 (258-351)||(33350101-33350194)
chr7 (258-351)||(36869584-36869677)
chr7 (258-323)||(39906665-39906730)
chr7 (258-350)||(43282300-43282392)
chr7 (265-350)||(24549989-24550074)
chr7 (259-316)||(46356152-46356209)
chr7 (284-328)||(14593678-14593722)
chr7 (284-328)||(16013201-16013245)
chr7 (258-350)||(38606900-38606992)
chr7 (258-350)||(45836775-45836867)
chr7 (258-313)||(29653849-29653904)
chr7 (271-350)||(32630490-32630569)
chr7 (258-317)||(40139211-40139270)
chr7 (263-350)||(42177315-42177402)
chr7 (258-350)||(28628228-28628317)
chr7 (258-328)||(43491225-43491295)
chr7 (258-328)||(44855467-44855537)
chr7 (261-350)||(7272934-7273023)
chr7 (258-339)||(43281582-43281663)
chr7 (265-337)||(1740705-1740777)
chr7 (284-328)||(5335839-5335883)
chr7 (258-314)||(27022001-27022057)
chr7 (258-322)||(35559289-35559353)
chr7 (286-328)||(28542206-28542248)
chr7 (264-317)||(48736200-48736253)
chr7 (366-413)||(2223079-2223127)
chr7 (258-310)||(8492528-8492580)
chr7 (258-314)||(36102060-36102116)
chr7 (258-314)||(36136695-36136751)
[»] chr1 (43 HSPs)
chr1 (258-351)||(1210639-1210732)
chr1 (258-350)||(696164-696256)
chr1 (258-351)||(8671814-8671907)
chr1 (258-351)||(9592628-9592721)
chr1 (267-340)||(26016342-26016415)
chr1 (258-351)||(30202425-30202518)
chr1 (258-351)||(49347688-49347781)
chr1 (258-350)||(4379900-4379992)
chr1 (258-334)||(9509229-9509305)
chr1 (258-350)||(9599689-9599781)
chr1 (258-351)||(32083040-32083133)
chr1 (258-350)||(15085829-15085921)
chr1 (258-351)||(8391666-8391759)
chr1 (258-351)||(22089988-22090081)
chr1 (258-351)||(43240676-43240769)
chr1 (258-351)||(51601952-51602045)
chr1 (265-350)||(52442806-52442891)
chr1 (262-350)||(18469379-18469467)
chr1 (258-351)||(32231249-32231342)
chr1 (258-351)||(34792644-34792736)
chr1 (258-351)||(51441060-51441153)
chr1 (258-351)||(4001750-4001841)
chr1 (284-350)||(46226603-46226669)
chr1 (265-350)||(1661321-1661406)
chr1 (261-350)||(19936417-19936506)
chr1 (258-323)||(37463166-37463231)
chr1 (258-347)||(38807970-38808058)
chr1 (258-314)||(16273115-16273171)
chr1 (264-317)||(43423645-43423700)
chr1 (258-298)||(52561906-52561946)
chr1 (264-323)||(34827403-34827462)
chr1 (263-317)||(4590824-4590878)
chr1 (263-341)||(15577328-15577406)
chr1 (263-317)||(16822319-16822373)
chr1 (263-317)||(17815403-17815456)
chr1 (373-442)||(34619476-34619546)
chr1 (258-348)||(52633467-52633556)
chr1 (258-307)||(16142179-16142228)
chr1 (278-315)||(18793303-18793340)
chr1 (258-311)||(19908665-19908718)
chr1 (265-305)||(6025545-6025585)
chr1 (258-350)||(40419534-40419626)
chr1 (267-315)||(40920841-40920889)
[»] chr6 (26 HSPs)
chr6 (258-350)||(608054-608146)
chr6 (258-350)||(5631713-5631805)
chr6 (258-328)||(9594007-9594077)
chr6 (258-351)||(14030700-14030794)
chr6 (258-351)||(9706670-9706763)
chr6 (258-351)||(28085270-28085363)
chr6 (258-346)||(10100152-10100240)
chr6 (258-350)||(30031151-30031243)
chr6 (264-340)||(33083963-33084039)
chr6 (264-340)||(33998305-33998381)
chr6 (258-320)||(9568585-9568647)
chr6 (284-328)||(4948628-4948672)
chr6 (284-328)||(4955599-4955643)
chr6 (258-350)||(6056065-6056157)
chr6 (258-350)||(20427931-20428023)
chr6 (272-334)||(6293678-6293740)
chr6 (258-328)||(32755836-32755906)
chr6 (292-349)||(2079229-2079286)
chr6 (261-350)||(5258448-5258537)
chr6 (263-315)||(7513283-7513335)
chr6 (289-349)||(12134227-12134287)
chr6 (264-350)||(28027126-28027212)
chr6 (264-317)||(546927-546980)
chr6 (263-328)||(7513686-7513751)
chr6 (285-313)||(14389483-14389511)
chr6 (258-350)||(33496079-33496171)
[»] scaffold0157 (1 HSPs)
scaffold0157 (258-351)||(25740-25833)
[»] chr8 (37 HSPs)
chr8 (258-351)||(39946751-39946844)
chr8 (258-328)||(36395245-36395315)
chr8 (258-344)||(36565536-36565622)
chr8 (258-351)||(36545041-36545134)
chr8 (258-350)||(15215566-15215658)
chr8 (258-322)||(29520583-29520647)
chr8 (258-344)||(40813223-40813309)
chr8 (258-350)||(37077660-37077752)
chr8 (258-313)||(32043522-32043577)
chr8 (258-317)||(36069571-36069630)
chr8 (258-351)||(12492137-12492230)
chr8 (285-350)||(45512818-45512883)
chr8 (258-351)||(2796449-2796544)
chr8 (263-323)||(13171949-13172009)
chr8 (258-349)||(16917080-16917171)
chr8 (267-350)||(39953568-39953651)
chr8 (259-350)||(42854300-42854391)
chr8 (258-315)||(6510721-6510778)
chr8 (258-315)||(10080200-10080257)
chr8 (258-323)||(30783335-30783400)
chr8 (258-311)||(44681334-44681387)
chr8 (258-315)||(45419169-45419226)
chr8 (267-315)||(10824464-10824512)
chr8 (258-350)||(13986389-13986481)
chr8 (258-350)||(18125070-18125162)
chr8 (258-322)||(28300407-28300471)
chr8 (258-350)||(30748354-30748446)
chr8 (263-314)||(2518691-2518742)
chr8 (289-328)||(30456537-30456576)
chr8 (284-350)||(29735701-29735767)
chr8 (268-350)||(36143264-36143346)
chr8 (258-315)||(16351320-16351377)
chr8 (265-334)||(33511271-33511340)
chr8 (285-350)||(43732462-43732527)
chr8 (273-322)||(44681386-44681435)
chr8 (258-350)||(18752168-18752260)
chr8 (258-298)||(21121105-21121145)
[»] chr5 (35 HSPs)
chr5 (258-351)||(1275159-1275252)
chr5 (258-351)||(10639191-10639284)
chr5 (258-351)||(12492682-12492775)
chr5 (258-351)||(1287884-1287977)
chr5 (258-350)||(16347673-16347765)
chr5 (258-351)||(2075769-2075862)
chr5 (258-351)||(24178404-24178497)
chr5 (258-322)||(21952274-21952338)
chr5 (258-323)||(7678402-7678467)
chr5 (258-351)||(20318881-20318969)
chr5 (266-323)||(34194799-34194856)
chr5 (258-314)||(9235000-9235056)
chr5 (258-349)||(5305512-5305603)
chr5 (284-323)||(27998345-27998384)
chr5 (263-350)||(30588348-30588435)
chr5 (258-328)||(11002716-11002786)
chr5 (285-350)||(21093671-21093736)
chr5 (258-323)||(28186963-28187028)
chr5 (258-351)||(28977152-28977245)
chr5 (258-343)||(32516460-32516545)
chr5 (279-344)||(34272923-34272988)
chr5 (263-344)||(36200683-36200764)
chr5 (284-317)||(43558135-43558168)
chr5 (263-307)||(6888931-6888975)
chr5 (258-314)||(26884984-26885040)
chr5 (261-317)||(4496310-4496368)
chr5 (258-317)||(6368220-6368279)
chr5 (288-349)||(5848401-5848462)
chr5 (265-334)||(10083041-10083109)
chr5 (258-323)||(17340732-17340797)
chr5 (263-348)||(41110041-41110126)
chr5 (258-338)||(3301751-3301831)
chr5 (374-413)||(4991042-4991082)
chr5 (267-343)||(28676501-28676577)
chr5 (258-306)||(31636213-31636261)
[»] scaffold0045 (1 HSPs)
scaffold0045 (258-323)||(86902-86967)
[»] scaffold0036 (1 HSPs)
scaffold0036 (258-351)||(4567-4660)
[»] scaffold0113 (1 HSPs)
scaffold0113 (259-351)||(11894-11986)
[»] scaffold0024 (1 HSPs)
scaffold0024 (258-350)||(82616-82708)


Alignment Details
Target: chr3 (Bit Score: 427; Significance: 0; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 11 - 614
Target Start/End: Complemental strand, 45237088 - 45236485
Alignment:
Q  11 cagagaggcatgaatattatctcctataacctcttgttgcaatgcttctgctaaaccacggaggccaaatttactggctgaataagctacataaccataa 110  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45237088 cagagagacatgaatattatctcctataacctcttgttgcaatgcttctgctaaaccacggaggccaaatttactggctgaataagctacataaccataa 45236989  T
Q  111 attcccacctaaactccaaattnnnnnnnnnnnnnnnnnnccacatcactagattatccctctacatactcaaaccgaaggctattttccatcatattta 210  Q
    ||||||||||||||||||||||                  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  45236988 attcccacctaaactccaaattaaaaaaataaataaaaaaccacatcactagattatctctctacatactcaaaccgaaggctattttccatcatattta 45236889  T
Q  211 caactataggtgctaatccaacacacacannnnnnnnnnnnnnnnnnaatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgca 310  Q
    ||||||||||||||| |||||||||||||                  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45236888 caactataggtgctactccaacacacacactctctctgtctctct--aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgca 45236791  T
Q  311 acatcctaatctcggctaggcttactttattctcgtgttgaacnnnnnnnn--ttaaactttactttatctttcgttataaaa-tagcttatacacaaac 407  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||| ||||||||||||||||    
T  45236790 acatcctaatctcggctaggcttactttattctcgtgttgaacaaaaaaaaaattaaactttactttatctttcgttataaaaatagcttatacacaaac 45236691  T
Q  408 acttatggtataaagtgcaaattaagctgtttatctaaatggccataatttatgggtaaaattcccaattccatacctgaccagcttgtgatgaaacaaa 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  45236690 acttatggtataaagtgcaaattaagctgtttatctaaatggccataatttatgggtaaaattcccaattccatacctgaccagcttgtgatgaaac-aa 45236592  T
Q  508 agcaatagaagcaggtaaagtatatttcctattcttcttcatatgaggcaaagcagctttaatcatattcaaacaacccatcaaattaacatcaatcgta 607  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45236591 agcaatagaagcaggtaaagtatctttcctattcttcttcatatgaggcaaagcagctttaatcatattcaaacaacccatcaaattaacatcaatcgta 45236492  T
Q  608 aacttga 614  Q
    |||||||    
T  45236491 aacttga 45236485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 51448004 - 51448097
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||  |||| || |||||| ||||||    
T  51448004 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttagttgattctcatgttga 51448097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 264 - 350
Target Start/End: Complemental strand, 26490298 - 26490212
Alignment:
Q  264 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||| |||||||||||| |||| |||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| |||||    
T  26490298 gtcattgctaatcatatcccgtcttgtcttaccactcatccaacgcaacatcctcatctccgctacacttacttgattctcttgttg 26490212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 344
Target Start/End: Complemental strand, 52138787 - 52138701
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctc 344  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| ||||||    
T  52138787 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctc 52138701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 345013 - 345098
Alignment:
Q  265 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| ||||  |||||||||||||||| |||||||  ||||||||||| || |||| |||||||||||||| ||||||    
T  345013 tcatttctaatcctatctcgtctagtcttaccacaaatccaacataacatcctaatttccgctatgcttactttattcttgtgttg 345098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 25191366 - 25191273
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||| |||||||  ||||||||||  ||||||||||||||| |||||| ||||||||||| ||||| ||||  ||||||||| |||||||||||    
T  25191366 aatgatgtcattcttaatcatatcatgtctagtcttaccactcatccagcgcaacatcctcatctctgctacacttactttactctcgtgttga 25191273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 28245424 - 28245331
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||| ||||||| |||||| ||||||| ||||||||||||| |||||||||||||||||| ||||  ||||  ||||||| |||||| ||||||    
T  28245424 aatgatgtcattcctaatcctatccaggctagtcttaccactcatccaacgcaacatcctcatctttgctacacttacttaattctcatgttga 28245331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 263 - 351
Target Start/End: Complemental strand, 38850076 - 38849988
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||| |||||||||||  |||||||||||| || |||||| ||||||||||| ||||| ||||  ||||||| |||||||||||||    
T  38850076 tgtcattcctaatcatatcatgtctagtcttactactcatccagcgcaacatcctcatctctgctacacttacttgattctcgtgttga 38849988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 33272323 - 33272416
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||||||||  ||||| ||||  ||||||||||||||| ||||||| |||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  33272323 aatggtgtcattcttaatcctatcatgtctagtcttaccactcatccaatgcaacatcctcatctctgctacacttacttgattctcatgttga 33272416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 5168815 - 5168723
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| |||||| ||||| |||||||||||||   |||||| ||||||||||| ||||| ||||  ||||||||| |||| |||||    
T  5168815 aatggtgtcattcctaatcctatcctgtctagtcttacctatcatccagcgcaacatcctcatctccgctacacttactttactctcatgttg 5168723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 47233891 - 47233955
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 322  Q
    ||||||||||||||||||| ||||  ||||||||||||||| |||||||||||| ||||| ||||    
T  47233891 aatggtgtcatttctaatcttatcatgtctagtcttaccactcatccaacgcaatatcctcatct 47233955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 53519573 - 53519481
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||  ||||| ||||| ||||||| ||||||| |||||||||||||||||| || || ||||  || |||||| ||||||||||    
T  53519573 aatggtgtcattcttaatcctatcctgtctagtattaccactcatccaacgcaacatcctcatttccgctacactaactttactctcgtgttg 53519481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 54128365 - 54128273
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||  ||||| ||||  ||||||| ||||||| |||| ||||||||||||| ||||| |||| |||||||| |||||| |||||    
T  54128365 aatggtgtcattcataatcctatcgcgtctagttttaccactcatcaaacgcaacatcctcatctctgctaagcttacttgattctcatgttg 54128273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 265 - 351
Target Start/End: Original strand, 2341016 - 2341102
Alignment:
Q  265 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||  ||||  ||||||||||||||||||||||| |||||||||| |||||  |||  |||| |||||||||| |||||    
T  2341016 tcatttctaattctatcatgtctagtcttaccacacatccaatgcaacatcctcatctccactatccttattttattctcgcgttga 2341102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 36820260 - 36820318
Alignment:
Q  264 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 322  Q
    ||||||||||||| ||||  |||||||||||||||||||||||||||||| ||| ||||    
T  36820260 gtcatttctaatcctatctcgtctagtcttaccacacatccaacgcaacaaccttatct 36820318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 42510315 - 42510388
Alignment:
Q  267 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttat 340  Q
    |||||||| | |||||  |||||||||||||||||||||| |||||||||| ||||| |||| ||||| |||||    
T  42510315 atttctaaacctatcccatctagtcttaccacacatccaatgcaacatcctcatctctgctatgcttattttat 42510388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 45728133 - 45728041
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||| |||||||||||||| |||   |||| |||||||||| |||||| ||||||||||| ||||| ||||  ||||||| |||||| |||||    
T  45728133 aatgatgtcatttctaatcctatttcgtctcgtcttaccactcatccagcgcaacatcctcatctctgctacacttacttgattctcatgttg 45728041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 46431972 - 46432024
Alignment:
Q  264 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcc 316  Q
    ||||||||||| | ||||| ||||||||||||||||||||||| |||||||||    
T  46431972 gtcatttctaaccctatcctgtctagtcttaccacacatccaatgcaacatcc 46432024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 50249342 - 50249278
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgt 348  Q
    |||||||| |||||||||||||||| |||||| | ||||| |||| ||||| |||||||||||||    
T  50249342 gtctagtcctaccacacatccaacgaaacatcatcatctccgctatgcttattttattctcgtgt 50249278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 54279007 - 54278937
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    |||||||||||| |||||  ||||  |||||||||||||||  ||||||||||||||||| ||||| ||||    
T  54279007 aatggtgtcattcctaattctatcttgtctagtcttaccacttatccaacgcaacatcctcatctctgcta 54278937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 22060 - 21995
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 323  Q
    ||||||| |||| |||||| ||||  ||||||||||||||| |||||| ||||||||||| |||||    
T  22060 aatggtgacattcctaatcctatcatgtctagtcttaccactcatccagcgcaacatcctcatctc 21995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 285 - 350
Target Start/End: Original strand, 653859 - 653924
Alignment:
Q  285 tctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||| |||||||||||||||||||| ||||| ||||  |||| || ||||||||| ||||||||    
T  653859 tctagttttaccacacatccaacgcaaaatcctcatctttgctacgcgtactttattatcgtgttg 653924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 38054639 - 38054688
Alignment:
Q  265 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 314  Q
    |||||||||||| ||||| ||||||||||||||| ||| |||||||||||    
T  38054639 tcatttctaatcctatcccgtctagtcttaccacccattcaacgcaacat 38054688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 266 - 350
Target Start/End: Complemental strand, 29919283 - 29919199
Alignment:
Q  266 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||||||  ||||| || ||||||||||||||| ||||||| | |||||  |||  || | |||||||||||||||    
T  29919283 catttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctccactacactgattttattctcgtgttg 29919199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 266 - 350
Target Start/End: Complemental strand, 29968436 - 29968352
Alignment:
Q  266 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||||||  ||||| || ||||||||||||||| ||||||| | |||||  |||  || | |||||||||||||||    
T  29968436 catttctaatcatatctcgtctaatcgtaccacacatccaacacaacatcgtcatctccactacactgattttattctcgtgttg 29968352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 47542033 - 47542077
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||||    
T  47542033 gtctagtcttaccactcatccaacgcaacatcctcatctctgcta 47542077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 49841598 - 49841534
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 322  Q
    |||| |||||||||||||| || |  |||||||||||| ||||||||||| ||||||||| ||||    
T  49841598 aatgttgtcatttctaatcttacctcgtctagtcttactacacatccaacacaacatcctcatct 49841534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 350
Target Start/End: Original strand, 23534869 - 23534956
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||||| ||||   |||||| ||| || ||||| |||||||||||||  |||| |||| ||||| ||||||||| |||||    
T  23534869 tgtcatttctaatcttatctgatctagttttatcaaacatctaacgcaacatcctcttctccgctacgcttattttattctcatgttg 23534956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 269 - 315
Target Start/End: Complemental strand, 19736972 - 19736926
Alignment:
Q  269 ttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 315  Q
    |||||||| ||||| ||||||||||||||| |||||||| |||||||    
T  19736972 ttctaatcgtatcccgtctagtcttaccactcatccaacacaacatc 19736926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 312
Target Start/End: Complemental strand, 26388468 - 26388414
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaac 312  Q
    |||||| | ||||||||||||||  | |||||||| |||||||||||||||||||    
T  26388468 aatggtttaatttctaatcatatataatctagtctaaccacacatccaacgcaac 26388414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 268 - 350
Target Start/End: Complemental strand, 43308543 - 43308461
Alignment:
Q  268 tttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||| ||||  |||||||||||||||| || |||||||||| | |  |||||| || | ||| |||||||||||||||    
T  43308543 tttctaatcctatcatgtctagtcttaccacaaattcaacgcaacaccttcgtctcggttacgattattttattctcgtgttg 43308461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 46568103 - 46568033
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    |||| |||||||||||||   |||  ||||||||||| |||||||||||| ||||||||| ||||| ||||    
T  46568103 aatgttgtcatttctaattcaatctggtctagtcttaacacacatccaacacaacatcctcatctctgcta 46568033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Original strand, 29928585 - 29928634
Alignment:
Q  266 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 315  Q
    ||||||||||||||||  ||||| || ||||||||||||||| |||||||    
T  29928585 catttctaatcatatctcgtctaatcgtaccacacatccaacacaacatc 29928634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 315
Target Start/End: Original strand, 29977739 - 29977788
Alignment:
Q  266 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 315  Q
    ||||||||||||||||  ||||| || ||||||||||||||| |||||||    
T  29977739 catttctaatcatatctcgtctaatcgtaccacacatccaacacaacatc 29977788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 411
Target Start/End: Complemental strand, 37788839 - 37788794
Alignment:
Q  366 actttactttatctttcgttataaaatagcttatacacaaacactt 411  Q
    |||||| ||||||||| ||||||||||| |||||||| ||||||||    
T  37788839 actttattttatcttttgttataaaataacttatacataaacactt 37788794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 43695086 - 43695151
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 349  Q
    |||| |||||||||  |||||||||||||||||| ||||| | ||  ||||||| |||||||||||    
T  43695086 gtctggtcttaccattcatccaacgcaacatcctcatctctgttacacttacttgattctcgtgtt 43695151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 45289393 - 45289434
Alignment:
Q  262 gtgtcatttctaatcatatccagtctagtcttaccacacatc 303  Q
    ||||||||||||||| ||||| ||||||||||| ||||||||    
T  45289393 gtgtcatttctaatcttatcccgtctagtcttatcacacatc 45289434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 420
Target Start/End: Original strand, 2128341 - 2128397
Alignment:
Q  365 aactttactttatctttcgttata-aaatagcttatacacaaacacttatggtataa 420  Q
    ||||||| ||||||||| |||||| |||||||||||||| |||| |||||| |||||    
T  2128341 aactttattttatcttttgttatagaaatagcttatacataaacgcttatgctataa 2128397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 39600976 - 39601020
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacat 302  Q
    |||| |||||||||||||| |||||  ||||||||||||||||||    
T  39600976 aatgttgtcatttctaatcttatcccatctagtcttaccacacat 39601020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 181; Significance: 2e-97; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 262 - 612
Target Start/End: Complemental strand, 7825341 - 7824976
Alignment:
Q  262 gtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttgaacnnnnnnnn 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||  ||            
T  7825341 gtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctctgctacgcttactttattctcatgttccacaaaaaaga 7825242  T
Q  362 ------ttaaactttactttatctttcgttataaaa-tagcttatacacaaacacttatggtataaagtgcaaattaagctgtttatctaaa--tggcca 452  Q
          || ||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||| | |||||||||||||||||| |||  ||||||    
T  7825241 aaaaaatttaactttactttatcttttgttataaaaatagcttatacagaaacacttatggtataaacttcaaattaagctgtttatccaaacatggcca 7825142  T
Q  453 taat---------ttatgggtaaaattcccaattccatacctgaccagcttgtgatgaaacaaaagcaatagaagcaggtaaagtatatttcctattctt 543  Q
    ||||         ||||  |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||       
T  7825141 taataaacataatttatctgtaaaatttccaactccatacctgaccagcttgtgatgaaacaaaagcaatagaagcaggtaaagtatctttcctatt--- 7825045  T
Q  544 cttcatatgaggcaaagcagctttaatcatattcaaacaacccatcaaattaacatcaatcgtaaactt 612  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7825044 cttcatttgcggcaaagcagctttaatcatattcaaacaacccatcaagttaacatcaatcgtaaactt 7824976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 7830082 - 7829972
Alignment:
Q  11 cagagaggcatgaatattatctcctataacctcttgttgcaatgcttctgctaaaccacggaggccaaatttactggctgaataagctacataaccataa 110  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| || |||||||||||||| ||||||    
T  7830082 cagagagacatgaatattatctccaataacctcttgttgcaatgcctctgctaacccacggaggccaaatttactagccgaataagctacatagccataa 7829983  T
Q  111 attcccaccta 121  Q
    |||||||||||    
T  7829982 attcccaccta 7829972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 266 - 344
Target Start/End: Complemental strand, 45077727 - 45077649
Alignment:
Q  266 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctc 344  Q
    ||||||||||  |||| ||||||||||||||||||||||||||||||||||| ||||| |||| ||||| |||||||||    
T  45077727 catttctaattctatctagtctagtcttaccacacatccaacgcaacatcctcatctcagctatgcttattttattctc 45077649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 38429871 - 38429779
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  |||||| || ||||||||||    
T  38429871 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctccgctacacttactctactctcgtgttg 38429779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 41763336 - 41763428
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||| ||||||||||| ||||| ||||  ||||||||| ||||||||||    
T  41763336 aatggtgtcattcctaatcctatcttgtctagtcttaccactcatccatcgcaacatcctcatctccgctacacttactttactctcgtgttg 41763428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 2610515 - 2610422
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| | ||| ||||||||||||||| ||||||||||| |||||| ||||| ||||  ||||||| |||||| ||||||    
T  2610515 aatggtgtcattcctaatcctgtcctgtctagtcttaccactcatccaacgcagcatcctcatctctgctacacttacttgattctcatgttga 2610422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 3866059 - 3865966
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||| | ||||| ||||  ||||||| |||||| ||||||    
T  3866059 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcatcatctctgctacacttacttgattctcatgttga 3865966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 8180767 - 8180674
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||| ||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  8180767 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacacaacatcctcatctctgctacacttacttgattctcatgttga 8180674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 11992401 - 11992494
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||| ||||||| |||||| ||||||||||| ||||| ||||  ||||||||| |||||||||||    
T  11992401 aatggtgtcattcctaatcttatcatgtctagtattaccactcatccagcgcaacatcctcatctccgctacacttactttactctcgtgttga 11992494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 261 - 350
Target Start/End: Original strand, 16097288 - 16097377
Alignment:
Q  261 ggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||  |||||||||| ||||| ||||  ||||||| |||||| |||||    
T  16097288 ggtgtcatttctaatcatatcccatctagtcttaccactcatccagtgcaacatcctcatctccgctacacttacttgattctcatgttg 16097377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 262 - 351
Target Start/End: Complemental strand, 36183434 - 36183345
Alignment:
Q  262 gtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  36183434 gtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 36183345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 41197523 - 41197615
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||| | ||||||||||| ||||| ||||  ||||||||| ||||||||||    
T  41197523 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatctagcgcaacatcctcatctccgctacacttactttactctcgtgttg 41197615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 258 - 317
Target Start/End: Original strand, 9556663 - 9556722
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 317  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  9556663 aatgttgtcatttctaatcatatcccgtctaatcttaccacacatccaacacaacatcct 9556722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 23714579 - 23714645
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||||||||||||||| |||||| |||||||| |||| ||||| |||||| ||||||||    
T  23714579 gtctagtcttaccacacatccaacacaacattctaatctctgctatgcttaatttattttcgtgttg 23714645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 24102251 - 24102317
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||||||||||||||| |||||| |||||||| |||| ||||| |||||| ||||||||    
T  24102251 gtctagtcttaccacacatccaacacaacattctaatctctgctatgcttaatttattttcgtgttg 24102317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 12734688 - 12734623
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 323  Q
    ||||||||||||||||||| ||||| ||||||||||||||| |||||| | ||||||||| |||||    
T  12734688 aatggtgtcatttctaatcctatcccgtctagtcttaccactcatccagcacaacatcctcatctc 12734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 42092501 - 42092436
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    |||||||||||||||||||| |||||||||||| |||||||||| |||||||| | ||||| ||||    
T  42092501 tgtcatttctaatcatatcccgtctagtcttactacacatccaatgcaacatcatcatctctgcta 42092436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 351
Target Start/End: Original strand, 19337174 - 19337237
Alignment:
Q  288 agtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||||||||||||||||| |||||||| |||||  ||| ||||| ||||||||||||||||    
T  19337174 agtcttaccacacatccaacgtaacatcctcatctccactacgcttattttattctcgtgttga 19337237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 266 - 328
Target Start/End: Original strand, 9647908 - 9647970
Alignment:
Q  266 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    ||||||||||| ||||   ||||||||||||||||||||||||||||||||| ||||| ||||    
T  9647908 catttctaatcttatcacatctagtcttaccacacatccaacgcaacatcctcatctctgcta 9647970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 3243946 - 3244039
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||||||||  ||||| ||||  || ||||||||| || |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  3243946 aatggtgtcattcataatcctatcatgtgtagtcttactactcatccaacgcaacatccttatctctgctacacttacttgattctcatgttga 3244039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 317
Target Start/End: Original strand, 38452984 - 38453043
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 317  Q
    |||||||||||| |||||| |||   ||||||||||||||| ||||||||||||||||||    
T  38452984 aatggtgtcattcctaatcctatgatgtctagtcttaccactcatccaacgcaacatcct 38453043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 270 - 351
Target Start/End: Original strand, 451929 - 452010
Alignment:
Q  270 tctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||| ||||  ||||||||||||||| |||| |||||||||| || ||||| ||||  ||||||| |||||| ||||||    
T  451929 tctaatcctatcatgtctagtcttaccactcatctaacgcaacatactcatctctgctacacttacttgattctcatgttga 452010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 4598879 - 4598916
Alignment:
Q  278 tatccagtctagtcttaccacacatccaacgcaacatc 315  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  4598879 tatcccgtctagtcttaccacacatccaacgcaacatc 4598916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 4807579 - 4807486
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||| |||||||  ||||| ||||  ||||| ||||||||  |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  4807579 aatgatgtcattcataatcctatcatgtctattcttaccattcatccaacgcaacatcctcatctctgctacacttacttaattctcatgttga 4807486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 18188769 - 18188706
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 322  Q
    |||| |||||||||| ||||||||| |||||| ||||| ||||||||||| ||||||||| ||||    
T  18188769 aatgttgtcatttctgatcatatcccgtctagccttac-acacatccaacacaacatcctcatct 18188706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 19527833 - 19527897
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 322  Q
    |||| |||||| |||||||||| |  ||| |||||| ||||||||||||||||||||||| ||||    
T  19527833 aatgttgtcatgtctaatcatagcacgtccagtcttgccacacatccaacgcaacatcctcatct 19527897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 21834540 - 21834449
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||| ||| |||||||||| ||||   ||||||||||||||||||||||| ||||||| | |||||  | |  ||||||||||||||||||||    
T  21834540 aatgttgtaatttctaatcttatctcatctagtcttaccacacatccaactcaacatctttatctcaac-acacttactttattctcgtgttg 21834449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 45367919 - 45368011
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||  ||||| ||||  ||||||||||||||  |||||| ||||||||| | ||||| | ||  ||||||||| ||||||||||    
T  45367919 aatggtgtcattcttaatcctatcttgtctagtcttaccattcatccagcgcaacatcatcatctccgttatacttactttactctcgtgttg 45368011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 261 - 351
Target Start/End: Original strand, 24583904 - 24583994
Alignment:
Q  261 ggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||  ||||||||||  || |||||||||||| |||||  | ||||||| | ||||| ||||  ||||||| |||||||||||||    
T  24583904 ggtgtcattcttaatcatatcatgtttagtcttaccactcatcccgcacaacatcttcatctctgctacacttacttgattctcgtgttga 24583994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 38434938 - 38434868
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    |||| |||||||||||||| | ||  ||||||| ||||||| ||||||| |||||||||| ||||| ||||    
T  38434938 aatgttgtcatttctaatcttctctcgtctagttttaccacgcatccaatgcaacatcctcatctccgcta 38434868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 7825396 - 7825355
Alignment:
Q  193 tattttccatcatatttacaactataggtgctaatccaacac 234  Q
    |||||| || ||||||||||||||||||||||| ||||||||    
T  7825396 tatttttcaccatatttacaactataggtgctactccaacac 7825355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 23997604 - 23997511
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| ||||||  |||  ||||||||||||||| |||||| ||||||||| | ||||| | ||  |||||||   |||||||||||    
T  23997604 aatggtgtcattcctaatccgatcatgtctagtcttaccactcatccagcgcaacatcttcatctccgttacacttacttggctctcgtgttga 23997511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 31455 - 31362
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||||||||| ||||  ||||||| |||||| ||||||    
T  31455 aatggtgtcattcctaatcttatcctgtctagtcttaccactcatccaacgcaacatcctaatctctgctacacttacttgattctcatgttga 31362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 285 - 349
Target Start/End: Original strand, 44193 - 44257
Alignment:
Q  285 tctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 349  Q
    |||||||||||| |||||||||||||||||||| ||||| |||  ||||| ||||||||||||||    
T  44193 tctagtcttaccgcacatccaacgcaacatcctcatctccgctgcgcttattttattctcgtgtt 44257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 2e-23; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 45205143 - 45205235
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||| ||||||||| ||||| |||| |||||||| ||||||||||||    
T  45205143 aatggtgtcattcctaatcctatcccgtctagtcttaccactcatccaacacaacatcctcatctccgctacgcttacttgattctcgtgttg 45205235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 31960109 - 31960202
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  31960109 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 31960202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 12494737 - 12494644
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  12494737 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 12494644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 263 - 350
Target Start/End: Complemental strand, 11389704 - 11389615
Alignment:
Q  263 tgtcatttctaatc--atatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||||  |||||| ||||||| |||||||||||||||  ||||||||| ||||| |||| |||||||||||||||| ||||    
T  11389704 tgtcatttctaatcctatatcccgtctagttttaccacacatccaatccaacatcctcatctctgctacgcttactttattctcgagttg 11389615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 4440842 - 4440749
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||| |||| |||||| ||||  ||||||||||||||| |||| ||||||||||||||||||| ||||  ||||||| |||||| ||||||    
T  4440842 aatggtgccattcctaatcctatcatgtctagtcttaccactcatcgaacgcaacatcctaatctctgctacacttacttgattctcatgttga 4440749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 23906596 - 23906689
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  |||||||||| |||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  23906596 aatggtgtcattcctaatcctatcttgtctagtcttgccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 23906689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 261 - 350
Target Start/End: Complemental strand, 35690288 - 35690199
Alignment:
Q  261 ggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||| |||||| ||||  |||||||||||| || |||||||||||||||||| ||||||||||  ||||||| |||||| |||||    
T  35690288 ggtgtcattcctaatcctatctcgtctagtcttactactcatccaacgcaacatcctcatctcggctacacttacttgattctcatgttg 35690199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 43433905 - 43433812
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  |||||||||| |||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  43433905 aatggtgtcattcctaatcctatcttgtctagtcttgccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 43433812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 48174388 - 48174481
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||||||||  ||||||||||||||| |||||||||||||||||| ||||  ||||  ||||||| ||| || ||||||    
T  48174388 aatggtgtcattcctaatcatatcatgtctagtcttaccactcatccaacgcaacatcctcatctttgctatacttacttgattttcatgttga 48174481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 48622836 - 48622929
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| ||||||| |||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  48622836 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaaagcaacatcctcatctctgctacacttacttgattctcatgttga 48622929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 50286958 - 50286865
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| ||||||||||||| |||| ||||| ||||  ||||||| |||||| ||||||    
T  50286958 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacttcctcatctctgctacacttacttgattctcatgttga 50286865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 52569810 - 52569903
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||| ||||||||||||| | |||||||| ||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  52569810 aatggtgtcattcctaatcctatcctgtctagtcttacccctcatccaacacaacatcctgatctctgctacacttacttgattctcatgttga 52569903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 264 - 340
Target Start/End: Complemental strand, 17900461 - 17900385
Alignment:
Q  264 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttat 340  Q
    ||||||||||||  |||||  ||||||||||||||||||||||||||||||||| || || |||| |||||||||||    
T  17900461 gtcatttctaattttatcccatctagtcttaccacacatccaacgcaacatcctcatttctgctacgcttactttat 17900385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 258 - 317
Target Start/End: Complemental strand, 2588968 - 2588909
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 317  Q
    |||| |||||||||||||| |||||  |||||||||||||||||||||||||||||||||    
T  2588968 aatgttgtcatttctaatcctatcccttctagtcttaccacacatccaacgcaacatcct 2588909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 20105766 - 20105836
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    |||| |||||||||||||||||||  |||||||||||||||||||||| ||||||||| | ||||| ||||    
T  20105766 aatgttgtcatttctaatcatatctcgtctagtcttaccacacatccatcgcaacatcatcatctccgcta 20105836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 56375277 - 56375207
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||    
T  56375277 aatggtgtcattcctaatcttatcttgtctagtcttaccactcatccaacgcaacatcctcatctctgcta 56375207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 436216 - 436123
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||||||||  ||||| ||||  |||||||||||| || |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  436216 aatggtgtcattcttaatcctatcatgtctagtcttacgactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 436123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 1777310 - 1777403
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||  ||||  ||||||| ||| || ||||||    
T  1777310 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctttgctatacttacttgattttcatgttga 1777403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 33191143 - 33191236
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| |||||  |||| ||||||||| |||||| ||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  33191143 aatggtgtcattcctaatcctatcctatctaatcttaccactcatccagcgcaacatcctcatctctgctacacttacttgattctcatgttga 33191236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 33709880 - 33709823
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttatt 341  Q
    |||||||||||||||||||||||||||||||| | ||||| |||||||||| ||||||    
T  33709880 gtctagtcttaccacacatccaacgcaacatcatcatctctgctaggcttaatttatt 33709823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 53707781 - 53707688
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| ||| || ||||  |||||||||||| || |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  53707781 aatggtgtcattcctagtcctatcatgtctagtcttactactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 53707688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 1211685 - 1211777
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| |||||||||||  ||||||| ||||||| ||||||  |||||||||| || || ||||  ||||||| ||||||||||||    
T  1211685 aatggtgtcattcctaatcatatcatgtctagttttaccactcatccagtgcaacatcctcatatccgctacacttacttgattctcgtgttg 1211777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 31459015 - 31458923
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||| ||||| |||||| ||||  ||||||||||||||| || ||||||||||||||| ||||  ||||  ||||||||||| ||||||||    
T  31459015 aatggtatcattcctaatcctatcatgtctagtcttaccactcaaccaacgcaacatcctcatctgtgctacacttactttattttcgtgttg 31458923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 27450494 - 27450560
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||||| |||||| ||||||||||| ||||| ||||  ||||||||| ||||||||||    
T  27450494 gtctagtcttaccactcatccagcgcaacatcctcatctccgctacacttactttactctcgtgttg 27450560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 33227196 - 33227103
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||||||||  ||||| ||||  ||||||||||||||| |||||| ||||||||||| ||||| ||||  ||||| | |||||| ||||||    
T  33227196 aatggtgtcattcttaatcctatcatgtctagtcttaccactcatccagcgcaacatcctcatctctgctacacttacatgattctcatgttga 33227103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 47265497 - 47265590
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||||||||  ||||| ||||  ||||||||||||||| |||||| ||||||||||| ||||  ||||  | ||||| |||||||||||||    
T  47265497 aatggtgtcattcataatcttatcatgtctagtcttaccactcatccagcgcaacatcctcatctttgctacacctacttgattctcgtgttga 47265590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 54470194 - 54470129
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 323  Q
    |||| ||| ||||| ||||||||||  |||||||||||||||||||||| |||||||||| |||||    
T  54470194 aatgttgttatttcaaatcatatcccatctagtcttaccacacatccaatgcaacatcctcatctc 54470129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 37797839 - 37797783
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 314  Q
    ||||||||||||||||||| ||||  ||||||||||| ||| |||||||||||||||    
T  37797839 aatggtgtcatttctaatcttatcatgtctagtcttatcactcatccaacgcaacat 37797783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 43070059 - 43070115
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 314  Q
    |||| |||||||||||||| ||||| ||||| |||||||||||||||||| ||||||    
T  43070059 aatgttgtcatttctaatcctatcctgtctaatcttaccacacatccaacccaacat 43070115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 45423606 - 45423542
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 322  Q
    |||| |||||||||||||  ||||| |||||||||||||||||| ||||| ||||||||| ||||    
T  45423606 aatgttgtcatttctaattctatcccgtctagtcttaccacacaaccaacacaacatcctcatct 45423542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 49987415 - 49987327
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgt 346  Q
    |||| |||||||||||||| ||||  |||||||||||| | |||| |||| ||||||||| ||||| |||| ||||| | |||||||||    
T  49987415 aatgttgtcatttctaatcctatcatgtctagtcttactaaacattcaacacaacatcctcatctctgctaagcttattatattctcgt 49987327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 341
Target Start/End: Original strand, 31403315 - 31403398
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttatt 341  Q
    |||| |||||||||||||| ||||| ||||| ||| ||||||||| |||| ||||||| | ||||| |||| ||||| ||||||    
T  31403315 aatgttgtcatttctaatcctatcccgtctaatctcaccacacattcaactcaacatcatcatctctgctacgcttaatttatt 31403398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 30853377 - 30853311
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||||| ||||||||| ||||||| | ||||| |||  ||||| |||||||||||||||    
T  30853377 gtctagtcttaccatacatccaacacaacatcttcatctccgctgcgcttattttattctcgtgttg 30853311  T

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Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 269 - 350
Target Start/End: Original strand, 7092525 - 7092606
Alignment:
Q  269 ttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||||  ||||| |||||||| |||||| | ||||||||| ||||| ||||  |||||||  |||||||||||    
T  7092525 ttctaatcatatcccttctagacttaccactcatccagcacaacatcctcatctctgctacacttacttgcttctcgtgttg 7092606  T

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Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 25967568 - 25967621
Alignment:
Q  264 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 317  Q
    ||||||||||||| || |  |||||||||||||||||||||| |||||||||||    
T  25967568 gtcatttctaatcctaccatgtctagtcttaccacacatccatcgcaacatcct 25967621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 46583119 - 46583212
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||| | |||||||||||||||   || || |||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  46583119 aatggtgtcattcctaatcctatgctgtctagtcttaccacttctctaatgcaacatcctcatctctgctacacttacttgattctcatgttga 46583212  T

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Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 1793447 - 1793355
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| |||||| ||||| ||  |||||||||   |||||||| ||||||||| ||||| ||||  ||||||| ||||| ||||||    
T  1793447 aatggtgtcattcctaatcttatcccgttaagtcttaccgttcatccaacacaacatcctcatctccgctacacttacttgattctagtgttg 1793355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 41009645 - 41009737
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||| |||||||||||||| || |  |||||||||||||   |||||||||||||||||| || || ||||  ||||||| |||||| |||||    
T  41009645 aatgatgtcatttctaatcctaccatgtctagtcttaccgatcatccaacgcaacatcctcatttccgctacacttacttgattctcatgttg 41009737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 317
Target Start/End: Complemental strand, 21106971 - 21106912
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 317  Q
    |||| |||||||||||||  ||||  |||||||||||||||||||| ||| |||||||||    
T  21106971 aatgttgtcatttctaattctatcacgtctagtcttaccacacatcgaacccaacatcct 21106912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 317
Target Start/End: Complemental strand, 44860833 - 44860782
Alignment:
Q  266 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 317  Q
    ||||||||||| ||| |  ||||||||||||||||||||||| |||||||||    
T  44860833 catttctaatcttattccatctagtcttaccacacatccaacacaacatcct 44860782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 349
Target Start/End: Original strand, 45185312 - 45185403
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 349  Q
    |||| |||||||||||||  ||||   ||||||||||| ||||||||||| ||| || || ||| | ||||  |||||||||||||||||||    
T  45185312 aatgttgtcatttctaattctatctcatctagtcttactacacatccaacacaatattcttatcaccgctacacttactttattctcgtgtt 45185403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 265 - 323
Target Start/End: Complemental strand, 25755297 - 25755239
Alignment:
Q  265 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 323  Q
    ||||||| |||||||||  |||||||||||||||||||| ||| |||||| || |||||    
T  25755297 tcatttccaatcatatcatgtctagtcttaccacacatctaacacaacattctcatctc 25755239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 352
Target Start/End: Complemental strand, 28236172 - 28236078
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttgaa 352  Q
    |||||||||||| |||||| ||||   |||| ||||||||  ||||||| ||| |||| ||||||| ||||  ||||||| |||||| |||||||    
T  28236172 aatggtgtcattcctaatcctatcatatctaatcttaccattcatccaatgcagcatcataatctctgctacacttacttgattctcatgttgaa 28236078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 18966540 - 18966483
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 315  Q
    |||| |||||||| ||||| |||   ||||| ||||||||||||||||||||||||||    
T  18966540 aatgttgtcatttataatcctattttgtctaatcttaccacacatccaacgcaacatc 18966483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 27983187 - 27983094
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  || |||||||||||| |||| | | ||| ||||| ||||| ||||  ||||||||| |||| ||||||    
T  27983187 aatggtgtcattcctaatcctatcatgtatagtcttaccactcatctagcacaatatcctcatctccgctacacttactttactctcatgttga 27983094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 40933198 - 40933283
Alignment:
Q  265 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||  ||||  || | |||||||||||||| |||||||||||||| ||||  ||||  |||| |||| ||||||||||    
T  40933198 tcatttctaattctatcatgtattgtcttaccacacattcaacgcaacatcctcatctacgctacacttattttactctcgtgttg 40933283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 41192816 - 41192763
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcc 316  Q
    |||||||| ||||  ||||| ||||| || ||||||||||||||||||||||||    
T  41192816 tgtcatttataattgtatcctgtctaatcataccacacatccaacgcaacatcc 41192763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 10209025 - 10208977
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaa 306  Q
    |||| |||||||||||||  |||||  ||||||||||||||||||||||    
T  10209025 aatgttgtcatttctaattctatcccatctagtcttaccacacatccaa 10208977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 17668406 - 17668462
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 314  Q
    |||| |||||||| ||||| ||||   |||||| |||||||||||||||||||||||    
T  17668406 aatgttgtcatttataatcttatctcatctagttttaccacacatccaacgcaacat 17668462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 350
Target Start/End: Original strand, 22421011 - 22421095
Alignment:
Q  266 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||  ||||  |||||||||  | ||||||||||||||||||||| |||||  ||| ||||| |||||| || |||||    
T  22421011 catttctaatattatctcgtctagtctctctacacatccaacgcaacatccttatctctactatgcttaatttattttcatgttg 22421095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 316
Target Start/End: Original strand, 49739115 - 49739147
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcc 316  Q
    |||||||||||||||||||| ||||||||||||    
T  49739115 gtctagtcttaccacacatctaacgcaacatcc 49739147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 11593947 - 11593854
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  11593947 aatggtgtcattcctaatcttatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 11593854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 35906496 - 35906589
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  35906496 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 35906589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 31005210 - 31005117
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||| ||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  31005210 aatggtgttattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 31005117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 36651981 - 36651888
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| | ||  ||||||| |||||| ||||||    
T  36651981 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgttacacttacttgattctcatgttga 36651888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 34869407 - 34869314
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| |||||  |||  ||||||| |||||| ||||||    
T  34869407 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctactacacttacttgattctcatgttga 34869314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 37617931 - 37617838
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||| ||| |||||| ||||||    
T  37617931 aatggtgtcattcctaatcctatcttgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttgcttgattctcatgttga 37617838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 269 - 350
Target Start/End: Complemental strand, 47848650 - 47848569
Alignment:
Q  269 ttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||| ||| ||||| |||||||||||||||||||||||| ||||||||| |||||  |||| |||| |||||||||||||||    
T  47848650 ttctgatcctatcccgtctagtcttaccacacatccaacacaacatcctcatctcccctagacttattttattctcgtgttg 47848569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 49029263 - 49029170
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| ||||||||| |||||||| ||||| ||||  ||||||| |||||| ||||||    
T  49029263 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgtaacatcctcatctctgctacacttacttgattctcatgttga 49029170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 258 - 349
Target Start/End: Original strand, 13859303 - 13859392
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 349  Q
    |||||||||||| |||||| ||||  ||||||||||||||| | |||||||||||||||| ||||| ||||  ||||||| |||||||||||    
T  13859303 aatggtgtcattcctaatcctatcatgtctagtcttaccactcgtccaacgcaacatcctcatctctgcta--cttacttgattctcgtgtt 13859392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 36514500 - 36514592
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||| |||| ||||||||  ||||| || ||||||||||||||||||||||||||||||| ||||| ||||  |||| |||||| ||||||||    
T  36514500 aatgttgtcctttctaattctatcccgtttagtcttaccacacatccaacgcaacatcctcatctctgctacacttaatttattttcgtgttg 36514592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 266 - 350
Target Start/End: Complemental strand, 42187449 - 42187366
Alignment:
Q  266 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||| |||||| |||||||||||| ||||||||||| ||||||||| ||||| |||| ||||||| |||||| ||||||    
T  42187449 catttctaat-atatcccgtctagtcttactacacatccaacacaacatcctcatctccgctacgcttactctattcttgtgttg 42187366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 258 - 341
Target Start/End: Original strand, 30200254 - 30200337
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttatt 341  Q
    |||| ||||||||||||||||||||  |||| |||||||||||||||||| ||||||||| ||||| ||||  |||| ||||||    
T  30200254 aatgttgtcatttctaatcatatcccatctaatcttaccacacatccaacacaacatcctcatctctgctacacttagtttatt 30200337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 258 - 344
Target Start/End: Complemental strand, 39811944 - 39811858
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctc 344  Q
    |||| |||||||||||||| ||||  ||||||||||||||||||||||| |||||||||| || || |||| ||||  |||||||||    
T  39811944 aatgttgtcatttctaatcctatcacgtctagtcttaccacacatccaaagcaacatcctcatatccgctacgcttgttttattctc 39811858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 285 - 350
Target Start/End: Original strand, 25579393 - 25579458
Alignment:
Q  285 tctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||| |||||||||||||||||||||||||| |||||  ||| ||||| |||||||||||||||    
T  25579393 tctagtattaccacacatccaacgcaacatcctcatctcctctacgcttattttattctcgtgttg 25579458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 33072941 - 33072848
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||| | ||||| ||||  |||| || |||||| ||||||    
T  33072941 aatggtgtcattcctaatcctatcttgtctagtcttaccactcatccaacgcaacatcatcatctctgctacacttatttgattctcatgttga 33072848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 33350101 - 33350194
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||||||||  ||||| ||||  ||||||||||||||| ||||||| |||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  33350101 aatggtgtcattcttaatcctatcatgtctagtcttaccactcatccaaggcaacatcctcatctctgctacacttacttgattctcatgttga 33350194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 36869584 - 36869677
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||| ||||||||||| |||||||| ||||||||| ||||| ||||  ||||||| |||| ||||||||    
T  36869584 aatggtgtcattcctaatcctatcatgtccagtcttaccactcatccaacacaacatcctcatctctgctacacttacttgattcacgtgttga 36869677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 39906665 - 39906730
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 323  Q
    |||||||||||| |||||| ||||| ||||||||||||||| ||||||||||| |||||| |||||    
T  39906665 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcagcatcctcatctc 39906730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 43282392 - 43282300
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||| |||||||||||||||||||  |||||| ||||||||||||| ||||||||||||| || || | |  ||||| |||||||| ||||||    
T  43282392 aatgttgtcatttctaatcatatcatgtctagacttaccacacatctaacgcaacatcctcatatccgttgtgcttaatttattcttgtgttg 43282300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 24549989 - 24550074
Alignment:
Q  265 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||||||| |  ||||||||||| ||||||||||| ||||||||| ||||| |||| || || |||||| | ||||||    
T  24549989 tcatttctaatcatattctatctagtcttacaacacatccaacacaacatcctcatctctgctacgcataatttatttttgtgttg 24550074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 259 - 316
Target Start/End: Original strand, 46356152 - 46356209
Alignment:
Q  259 atggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcc 316  Q
    ||||||||||| |||||| ||||| ||||||||||||||| ||| |||||||||||||    
T  46356152 atggtgtcattcctaatcctatcctgtctagtcttaccactcattcaacgcaacatcc 46356209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 14593722 - 14593678
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||    
T  14593722 gtctagtcttaccacacatccaacgcaacatcctcatctctgcta 14593678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 16013245 - 16013201
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||    
T  16013245 gtctagtcttaccacacatccaacgcaacatcctcatctctgcta 16013201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 38606992 - 38606900
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||| ||||||| |||||| ||||  ||||||||||||||| |||||| ||||||||  | ||||| ||||  ||||||||| ||||||||||    
T  38606992 aatgttgtcattcctaatcctatcatgtctagtcttaccactcatccagcgcaacattatcatctccgctacacttactttactctcgtgttg 38606900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 45836775 - 45836867
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| |||||| ||||  ||||| ||||||||| |||||| ||||||||||| ||||| |||   ||||||| | ||||||||||    
T  45836775 aatggtgtcattcctaatcctatcttgtctactcttaccactcatccagcgcaacatcctcatctccgctgcacttacttgactctcgtgttg 45836867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 29653849 - 29653904
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaaca 313  Q
    |||| |||||||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  29653849 aatgatgtcatttctaattctatcccgtctagtgttaccacacatccaacgcaaca 29653904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 271 - 350
Target Start/End: Complemental strand, 32630569 - 32630490
Alignment:
Q  271 ctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||| ||||  ||||||||||||||| |||||| | ||||||||| ||||| ||||  ||||||||| ||||||||||    
T  32630569 ctaatcctatcatgtctagtcttaccactcatccagctcaacatcctcatctccgctacacttactttactctcgtgttg 32630490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 317
Target Start/End: Original strand, 40139211 - 40139270
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 317  Q
    |||| |||| ||||||||| ||||| ||||||||||||||||||||| || |||||||||    
T  40139211 aatgttgtcttttctaatcttatcccgtctagtcttaccacacatcccacacaacatcct 40139270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 263 - 350
Target Start/End: Original strand, 42177315 - 42177402
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||||  |||||| | ||| | | || ||||| |||||| ||||||||    
T  42177315 tgtcatttctaatcaaatccagtatagtcttaccacatatccaacaaaacatctttatcactgttatgcttaatttattttcgtgttg 42177402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 28628228 - 28628317
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||| ||| ||||||||||  |||| || | ||||||||| |||||||| |||||||   |||||| |||| |||||||||||||||||||||    
T  28628228 aatgttgtaatttctaatcccatcccgtatggtcttaccatacatccaaggcaacat---aatctctgctacgcttactttattctcgtgttg 28628317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 43491295 - 43491225
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    |||||||||||| ||||||||||||  |||| ||||||| | |||||| | ||||||||| ||||||||||    
T  43491295 aatggtgtcattcctaatcatatcccatctaatcttaccgctcatccagcacaacatcctcatctcggcta 43491225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 44855467 - 44855537
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||| | ||||||||| ||||| ||||    
T  44855467 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccagcacaacatcctgatctctgcta 44855537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 261 - 350
Target Start/End: Complemental strand, 7273023 - 7272934
Alignment:
Q  261 ggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||| |||||| ||||| || |||||||||| | |||||| | ||||||||| ||||| | ||  ||||||| ||||||||||||    
T  7273023 ggtgtcattcctaatcctatcccgtgtagtcttaccgctcatccagcacaacatcctcatctccggtacacttacttgattctcgtgttg 7272934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 339
Target Start/End: Complemental strand, 43281663 - 43281582
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttacttta 339  Q
    |||||||||||| |||||| |||   ||||||||||||||| |||||| ||||||||||| ||| | ||||  |||||||||    
T  43281663 aatggtgtcattcctaatcctatattgtctagtcttaccactcatccagcgcaacatcctcatccccgctacacttacttta 43281582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 265 - 337
Target Start/End: Complemental strand, 1740777 - 1740705
Alignment:
Q  265 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactt 337  Q
    |||||||||||| || ||   |||||||||| ||||||||||||||||||||| ||||| ||||  |||||||    
T  1740777 tcatttctaatcttaccccacctagtcttactacacatccaacgcaacatcctcatctctgctacacttactt 1740705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 5335883 - 5335839
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||    
T  5335883 gtctagtcttaccacacattcaacgcaacatcctcatctctgcta 5335839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 27022001 - 27022057
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 314  Q
    |||| |||||||| ||||| ||||| ||||||||||| ||||||||||| |||||||    
T  27022001 aatgttgtcatttttaatcctatcctgtctagtcttatcacacatccaatgcaacat 27022057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 35559289 - 35559353
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 322  Q
    |||||||||||| |||||| |||| | |||  ||||||||| |||||||||||||||||| ||||    
T  35559289 aatggtgtcattcctaatcctatcaaatctgatcttaccactcatccaacgcaacatcctcatct 35559353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 28542206 - 28542248
Alignment:
Q  286 ctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||    
T  28542206 ctagtcttaccacacatccaacgcaacaccctcatctccgcta 28542248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 48736200 - 48736253
Alignment:
Q  264 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 317  Q
    ||||||||||||  ||||   |||||||||||||||||| ||||||||||||||    
T  48736200 gtcatttctaattttatctcatctagtcttaccacacattcaacgcaacatcct 48736253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 366 - 413
Target Start/End: Complemental strand, 2223127 - 2223079
Alignment:
Q  366 actttactttatctttcgttata-aaatagcttatacacaaacacttat 413  Q
    ||||| |||||||||| |||||| |||||||||||||| ||||||||||    
T  2223127 acttttctttatcttttgttatagaaatagcttatacataaacacttat 2223079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 8492528 - 8492580
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgca 310  Q
    ||||||||||||  ||||| ||||| |||||||||| |||| |||||||||||    
T  8492528 aatggtgtcattcgtaatcctatcccgtctagtcttgccactcatccaacgca 8492580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 36102060 - 36102116
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 314  Q
    |||| ||||||||||||||  ||||  ||||||||||||||||||| ||| ||||||    
T  36102060 aatgttgtcatttctaatctcatcccatctagtcttaccacacatcgaactcaacat 36102116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 36136751 - 36136695
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 314  Q
    |||||||||||| |||| | |||||  |||||||||||||| |||||||| ||||||    
T  36136751 aatggtgtcattcctaaacctatcccttctagtcttaccacccatccaacacaacat 36136695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 1e-21; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 1210732 - 1210639
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  1210732 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 1210639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 696256 - 696164
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||| ||||||||||| ||||| ||||  ||||||||| ||||||||||    
T  696256 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccagcgcaacatcctcatctccgctacacttactttactctcgtgttg 696164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 8671907 - 8671814
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  8671907 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatccttatctctgctacacttacttgattctcatgttga 8671814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 9592721 - 9592628
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  9592721 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 9592628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 267 - 340
Target Start/End: Complemental strand, 26016415 - 26016342
Alignment:
Q  267 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttat 340  Q
    |||| |||| |||||| |||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||    
T  26016415 atttataattatatcctgtctagtcttaccacacatccaacgcaacatcctcatctctgctacgcttactttat 26016342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 30202425 - 30202518
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  30202425 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 30202518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 49347688 - 49347781
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||  ||||  ||||||| |||||| ||||||    
T  49347688 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctttgctacacttacttgattctcatgttga 49347781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 4379992 - 4379900
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||| |||||||||||||||||||   ||||||||||||||||||||||| ||||||||| ||||| |||| ||||  |||||| ||||||||    
T  4379992 aatgttgtcatttctaatcatatcttttctagtcttaccacacatccaacacaacatcctcatctcagctaagctttatttattttcgtgttg 4379900  T

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Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 258 - 334
Target Start/End: Complemental strand, 9509305 - 9509229
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggctta 334  Q
    ||||||||||||||||||||||||| ||||||||||| ||| |||||||| ||||||||| ||||| |||| |||||    
T  9509305 aatggtgtcatttctaatcatatcctgtctagtcttatcactcatccaacacaacatcctcatctctgctacgctta 9509229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 9599689 - 9599781
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||| ||||||| |||||||||||| ||||||||||||||| |||||||| ||||||||| ||||| |||| |||||||| ||| | ||||||    
T  9599689 aatgatgtcattcctaatcatatcccgtctagtcttaccactcatccaacacaacatcctcatctctgctacgcttacttgattattgtgttg 9599781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 32083040 - 32083133
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| || || ||||||||||||||| |||||| ||||||||||| ||||| ||||  | ||||||| |||||||||||    
T  32083040 aatggtgtcattcctaatcctaccctgtctagtcttaccactcatccagcgcaacatcctcatctccgctacacatactttactctcgtgttga 32083133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 15085921 - 15085829
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| |||||| |||||  |||||||||||||| | |||| ||||||||||| ||||| ||||  ||||||||| ||||||||||    
T  15085921 aatggtgtcattcctaatcctatcctatctagtcttaccactcgtccagcgcaacatcctcatctccgctacacttactttactctcgtgttg 15085829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 8391759 - 8391666
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  || |||||||||||| |||||||| ||||||| | ||||| ||||  ||||||||| |||||||||||    
T  8391759 aatggtgtcattcctaatcctatcttgtgtagtcttaccactcatccaacacaacatcttcatctccgctacacttactttactctcgtgttga 8391666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 22090081 - 22089988
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||||||||  ||||| ||||| ||||||||||||||| |||||||| || |||||| ||||| ||||  ||||||| |||||| ||||||    
T  22090081 aatggtgtcattcataatcctatcctgtctagtcttaccactcatccaacacagcatcctcatctctgctacacttacttgattctcatgttga 22089988  T

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Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 43240676 - 43240769
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||| ||||||  ||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  43240676 aatggcgtcattcataatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 43240769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 51602045 - 51601952
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||||||||  ||||||||||||||| |||| ||||||||||||| || ||  |||  ||||||| |||||| ||||||    
T  51602045 aatggtgtcattcctaatcatatcatgtctagtcttaccactcatctaacgcaacatcctcatatctactacacttacttgattctcatgttga 51601952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 265 - 350
Target Start/End: Original strand, 52442806 - 52442891
Alignment:
Q  265 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| ||||  |||||||||||||||||||||||| ||||||||| || || |||| ||||| |||||| | ||||||    
T  52442806 tcatttctaatcttatcttgtctagtcttaccacacatccaacacaacatcctcatgtctgctacgcttaatttatttttgtgttg 52442891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 262 - 350
Target Start/End: Original strand, 18469379 - 18469467
Alignment:
Q  262 gtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||| |||||||||||  ||||||||||||||| ||| ||||||| |||| | ||||| |||| | |||||| ||||||||||||    
T  18469379 gtgtcattcctaatcatatcatgtctagtcttaccactcatacaacgcagcatcgtcatctccgctacgtttacttgattctcgtgttg 18469467  T

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Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 32231249 - 32231342
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||| ||||||||| |||| | ||||||||||| |||||  |||  ||||||| |||||||||||||    
T  32231249 aatggtgtcattcctaatcctatcatgtctaatcttaccactcatctagcgcaacatcctcatctctactacacttacttgattctcgtgttga 32231342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 34792644 - 34792736
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||| ||||| |||||| ||||  ||||||||||||||| |||||| ||||||||||| ||||| ||||  ||| ||| |||||||||||||    
T  34792644 aatggtttcattcctaatcctatcatgtctagtcttaccactcatccagcgcaacatcctcatctctgctacactt-cttgattctcgtgttga 34792736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 51441060 - 51441153
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| | ||||| |||||||||| ||||| ||||  || |||| |||||| ||||||    
T  51441060 aatggtgtcattcctaatcctatcatgtctagtcttaccactcgtccaatgcaacatcctcatctctgctacactcacttgattctcatgttga 51441153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 4001750 - 4001841
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| |||   ||||||||||||||| |||| | ||||||||||| ||||  ||||  ||||||||| |||||||||||    
T  4001750 aatggtgtcattcctaatcctattttgtctagtcttaccactcatctagcgcaacatcctcatcttcgcta--cttactttactctcgtgttga 4001841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 46226603 - 46226669
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||| ||||| |||||||||||||||| | ||||| ||||  ||||||| ||||||||||||    
T  46226603 gtctagtctcaccactcatccaacgcaacatcatcatctccgctaaacttacttgattctcgtgttg 46226669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 350
Target Start/End: Complemental strand, 1661406 - 1661321
Alignment:
Q  265 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| ||||   |||||||||| || |||| |||| ||||||| | ||||| |||| ||||| |||||||||||||||    
T  1661406 tcatttctaatcctatcacatctagtcttatcagacattcaacacaacatcttcatctctgctatgcttattttattctcgtgttg 1661321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 261 - 350
Target Start/End: Complemental strand, 19936506 - 19936417
Alignment:
Q  261 ggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||| ||| || |||||  |||||||||||||| |||||||| |||||| || ||||| |||| ||||| || |||||| |||||    
T  19936506 ggtgtcattcctattcctatcccatctagtcttaccactcatccaacacaacattctcatctccgctatgcttatttgattctcatgttg 19936417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 37463166 - 37463231
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 323  Q
    |||||||||||| |||||| || || ||||||||||||||| ||||||| | |||||||| |||||    
T  37463166 aatggtgtcattcctaatcctaacctgtctagtcttaccactcatccaatgaaacatcctcatctc 37463231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 347
Target Start/End: Original strand, 38807970 - 38808058
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtg 347  Q
    ||||||||||||||||||  ||||| |||| ||||||||||  ||||||| ||||||||| || || || | |||||||| |||||||||    
T  38807970 aatggtgtcatttctaattctatcccgtctggtcttaccac-tatccaacacaacatcctcatatccgccacgcttacttaattctcgtg 38808058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 16273115 - 16273171
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 314  Q
    |||| ||||||||||||||  |||   ||||||||||||||||||||||||||||||    
T  16273115 aatgttgtcatttctaatctcatctcatctagtcttaccacacatccaacgcaacat 16273171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 43423700 - 43423645
Alignment:
Q  264 gtcatttctaatcatatccagtctagtcttacc--acacatccaacgcaacatcct 317  Q
    ||||||||||||| ||||| |||||||||| ||  |||||||||||||||||||||    
T  43423700 gtcatttctaatcctatcctgtctagtcttcccccacacatccaacgcaacatcct 43423645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 52561906 - 52561946
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccac 298  Q
    |||||||||||| |||||||||||| |||||||||||||||    
T  52561906 aatggtgtcattcctaatcatatcccgtctagtcttaccac 52561946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 323
Target Start/End: Original strand, 34827403 - 34827462
Alignment:
Q  264 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 323  Q
    ||||||||||||| |||   ||||||||||||||| |||||||| ||||||||| |||||    
T  34827403 gtcatttctaatcttatatcgtctagtcttaccactcatccaacacaacatcctcatctc 34827462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 4590824 - 4590878
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 317  Q
    |||||||||||||| ||||  ||||||||| ||| ||||| ||||||||||||||    
T  4590824 tgtcatttctaatcctatcttgtctagtctcaccgcacattcaacgcaacatcct 4590878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 15577406 - 15577328
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttatt 341  Q
    |||||||| |||||| |||| ||||||||||||| |||||||||| | ||||  | ||||| |||| ||||| ||||||    
T  15577406 tgtcatttataatcacatcccgtctagtcttaccgcacatccaacacgacatgatcatctctgctaagcttaatttatt 15577328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 16822319 - 16822373
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 317  Q
    |||||||||||||| ||||   |||||| |||||||||||||||| |||||||||    
T  16822319 tgtcatttctaatcctatcttatctagtattaccacacatccaacacaacatcct 16822373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 17815456 - 17815403
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 317  Q
    |||||||||||||  ||||| ||||||||| |||||||||||||| |||||||||    
T  17815456 tgtcatttctaatgctatcccgtctagtct-accacacatccaacacaacatcct 17815403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 442
Target Start/End: Original strand, 34619476 - 34619546
Alignment:
Q  373 tttatctttcgttata-aaatagcttatacacaaacacttatggtataaagtgcaaattaagctgtttatc 442  Q
    ||||||||| |||||| |||| ||||||||| || || ||||| |||||  ||||||||||||||||||||    
T  34619476 tttatcttttgttatagaaatggcttatacataagcaattatgctataagctgcaaattaagctgtttatc 34619546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 258 - 348
Target Start/End: Original strand, 52633467 - 52633556
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgt 348  Q
    |||| ||||||||||| || ||||   |||||||||||| ||||| |||||||||||||| |||||  | |  ||||||||||||||||||    
T  52633467 aatgttgtcatttctagtcttatcacatctagtcttaccgcacattcaacgcaacatcctcatctccac-acacttactttattctcgtgt 52633556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 16142179 - 16142228
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaac 307  Q
    ||||||| |||| || ||| ||||| ||||||||||||||||||||||||    
T  16142179 aatggtggcattcctgatcctatcccgtctagtcttaccacacatccaac 16142228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 18793303 - 18793340
Alignment:
Q  278 tatccagtctagtcttaccacacatccaacgcaacatc 315  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  18793303 tatcctgtctagtctttccacacatccaacgcaacatc 18793340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 19908665 - 19908718
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaa 311  Q
    |||| ||||||| | |||||||||  |||||||||||| |||||||||||||||    
T  19908665 aatgttgtcattacaaatcatatcatgtctagtcttacaacacatccaacgcaa 19908718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 305
Target Start/End: Complemental strand, 6025585 - 6025545
Alignment:
Q  265 tcatttctaatcatatccagtctagtcttaccacacatcca 305  Q
    |||||||||||| |||||||||||||||| ||| |||||||    
T  6025585 tcatttctaatcttatccagtctagtcttgccaaacatcca 6025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 40419626 - 40419534
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||| |||||||||||||  ||||   |||||| |||||| |||| ||||||| |||||| ||||| ||||  ||||||||||  ||||||||    
T  40419626 aatgttgtcatttctaattctatctcatctagttttaccatacattcaacgcaccatcctcatctctgctacacttactttatgttcgtgttg 40419534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 40920841 - 40920889
Alignment:
Q  267 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 315  Q
    |||||||||| ||||  ||||| ||||||||||||||||| ||||||||    
T  40920841 atttctaatcctatctcgtctaatcttaccacacatccaatgcaacatc 40920889  T

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Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 608146 - 608054
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| |||||| |||||  |||||||||||||| ||||||||| |||||||| ||||| ||||  ||||||||||||||||||||    
T  608146 aatggtgtcattcctaatcctatcctatctagtcttaccactcatccaacggaacatcctcatctccgctacacttactttattctcgtgttg 608054  T

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Target: chr6; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 5631805 - 5631713
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| |||||||||||| ||||||||||||||| |||||||| ||||||||| ||||  ||||  ||||||||| ||||| ||||    
T  5631805 aatggtgtcattcctaatcatatccggtctagtcttaccactcatccaacacaacatcctcatcttcgctacacttactttactctcgcgttg 5631713  T

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Target: chr6; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 9594007 - 9594077
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||    
T  9594007 aatggtgtcattcctaatcctatcccgtctagtcttaccactcatccaacgcaacatcctcatctccgcta 9594077  T

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Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 14030794 - 14030700
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtctta-ccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||| ||||||||||| |||| |||||| ||||||||||| ||||| ||||  ||||||||| |||||||||||    
T  14030794 aatggtgtcattcctaatcctatcctgtctagtcttaaccactcatccatcgcaacatcctcatctctgctacacttactttactctcgtgttga 14030700  T

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Target: chr6; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 9706763 - 9706670
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| ||||||  |||||||||| ||||| ||||  ||||||||| |||||||||||    
T  9706763 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccagtgcaacatcctcatctccgctacacttactttactctcgtgttga 9706670  T

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Target: chr6; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 28085363 - 28085270
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||||||||  ||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  28085363 aatggtgtcattcgtaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 28085270  T

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Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 10100152 - 10100240
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgt 346  Q
    |||||||||||||||||||||||   ||||||||||||||| |||| ||||||||||||| ||||| ||||  ||||||| | ||||||    
T  10100152 aatggtgtcatttctaatcatatattgtctagtcttaccactcatctaacgcaacatcctcatctccgctacacttacttgactctcgt 10100240  T

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Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 30031243 - 30031151
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||| ||||||||||| ||||| ||||||||||||||| |||||||| ||||| ||| ||||| ||||  || |||| |||||| |||||    
T  30031243 aatggtgacatttctaatcctatcccgtctagtcttaccactcatccaacacaacaacctcatctccgctacactaacttgattctcatgttg 30031151  T

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Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 264 - 340
Target Start/End: Complemental strand, 33084039 - 33083963
Alignment:
Q  264 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttat 340  Q
    ||||||||||||  |||||  |||||||||||||||||||||||||| |||||| || || |||| |||||||||||    
T  33084039 gtcatttctaattctatcccatctagtcttaccacacatccaacgcagcatcctcatttctgctacgcttactttat 33083963  T

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Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 264 - 340
Target Start/End: Original strand, 33998305 - 33998381
Alignment:
Q  264 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttat 340  Q
    ||||||||||||| ||||   ||||||||||||||||||||||||||||||| | ||||| |||| ||||| |||||    
T  33998305 gtcatttctaatcctatcacatctagtcttaccacacatccaacgcaacatcttcatctctgctacgcttaatttat 33998381  T

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Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 9568647 - 9568585
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaat 320  Q
    |||| |||||||| ||||  ||||  |||||||||||||||||||||||||||||||||||||    
T  9568647 aatgttgtcatttataattctatcatgtctagtcttaccacacatccaacgcaacatcctaat 9568585  T

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Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 4948628 - 4948672
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||    
T  4948628 gtctagtcttaccacacatccaaagcaacatcctaatctccgcta 4948672  T

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Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 4955599 - 4955643
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||    
T  4955599 gtctagtcttaccacacatccaaagcaacatcctaatctccgcta 4955643  T

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Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 6056065 - 6056157
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||  |||||| ||||  |||||||||||||| |||||||||||||||||  || ||  ||| |||||||| ||| ||||||||    
T  6056065 aatggtgtcattcttaatcacatcctttctagtcttaccactcatccaacgcaacatccgcatttctactacgcttacttgattttcgtgttg 6056157  T

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Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 20427931 - 20428023
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| |||||| ||||| |||| ||| |||||| |||||| ||||||||||| ||||| ||||  |||| || | ||||||||||    
T  20427931 aatggtgtcattcctaatcctatcctgtcttgtcctaccactcatccagcgcaacatcctcatctccgctacacttatttgactctcgtgttg 20428023  T

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Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 6293678 - 6293740
Alignment:
Q  272 taatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggctta 334  Q
    |||||||||| |||||| | |||||||||||||||| ||||||||| ||||| |||| |||||    
T  6293678 taatcatatctagtctaattttaccacacatccaacacaacatcctcatctctgctatgctta 6293740  T

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Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 32755906 - 32755836
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    |||||||||||| |||||  ||||  ||||||||||||||| |||||||| ||||||||| ||||| ||||    
T  32755906 aatggtgtcattcctaatattatcatgtctagtcttaccactcatccaacacaacatcctcatctctgcta 32755836  T

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Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 292 - 349
Target Start/End: Complemental strand, 2079286 - 2079229
Alignment:
Q  292 ttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 349  Q
    |||||||||||||||| ||||||| | ||||| |||| ||||| ||||||||||||||    
T  2079286 ttaccacacatccaacacaacatcatcatctccgctacgcttattttattctcgtgtt 2079229  T

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Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 261 - 350
Target Start/End: Original strand, 5258448 - 5258537
Alignment:
Q  261 ggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||  ||||| ||||  ||||||||||||||| ||||||||||||||| || | ||| ||||  ||||||||  ||||||||||    
T  5258448 ggtgtcattcataatcctatcttgtctagtcttaccactcatccaacgcaacattctcacctccgctacacttactttgctctcgtgttg 5258537  T

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Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 7513283 - 7513335
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 315  Q
    ||||||||| |||| ||||   |||||||||||||||||||||||||||||||    
T  7513283 tgtcatttcaaatcttatctcatctagtcttaccacacatccaacgcaacatc 7513335  T

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Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 12134227 - 12134287
Alignment:
Q  289 gtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 349  Q
    ||||| ||||||||||||| |||||| || ||||| |||| ||||| ||||||||||||||    
T  12134227 gtcttgccacacatccaacacaacattctcatctctgctatgcttagtttattctcgtgtt 12134287  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 350
Target Start/End: Original strand, 28027126 - 28027212
Alignment:
Q  264 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||| |||||| ||| |  |||||||||||||| ||||||||  ||||||||  |||| |||| |||||||| |||||| |||||    
T  28027126 gtcattcctaatcctatgccatctagtcttaccactcatccaacataacatcctcgtctctgctatgcttacttgattctcatgttg 28027212  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 546980 - 546927
Alignment:
Q  264 gtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 317  Q
    ||||||| ||||||||||   |||||| ||| ||||||||||||||||||||||    
T  546980 gtcatttttaatcatatcttatctagttttatcacacatccaacgcaacatcct 546927  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 7513686 - 7513751
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    ||||||||||||| |||||  ||||||||||||||||||  ||| |||||||| | ||||| ||||    
T  7513686 tgtcatttctaattatatcgcgtctagtcttaccacacactcaaggcaacatctttatctctgcta 7513751  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 285 - 313
Target Start/End: Original strand, 14389483 - 14389511
Alignment:
Q  285 tctagtcttaccacacatccaacgcaaca 313  Q
    |||||||||||||||||||||||||||||    
T  14389483 tctagtcttaccacacatccaacgcaaca 14389511  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 33496171 - 33496079
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||||||||| |||||  | || ||||||||  ||||||| |||||||| | ||||| | ||  ||||||| |||||| |||||    
T  33496171 aatggtgtcatttctaatcttatcctatttaatcttaccattcatccaatgcaacatcatcatctccgttacacttacttgattctcatgttg 33496079  T

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Target: scaffold0157 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 25740 - 25833
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||| ||||||||||||||| ||||  ||||||| |||||| ||||||    
T  25740 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacacaacatcctaatctctgctacacttacttgattctcatgttga 25833  T

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Target: chr8 (Bit Score: 50; Significance: 3e-19; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 39946844 - 39946751
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||||||||  ||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||||||||||    
T  39946844 aatggtgtcattcataatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcgtgttga 39946751  T

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Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 36395245 - 36395315
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||| ||||| ||||    
T  36395245 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcaacatcctcatctctgcta 36395315  T

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Target: chr8; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 258 - 344
Target Start/End: Original strand, 36565536 - 36565622
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctc 344  Q
    |||||||||||| |||||| ||||| ||||||||||||||| ||||||||||| |||||| ||||| ||||  ||||||| ||||||    
T  36565536 aatggtgtcattcctaatcctatcctgtctagtcttaccactcatccaacgcatcatcctcatctctgctacacttacttgattctc 36565622  T

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Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 36545134 - 36545041
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  ||||||||||||||| |||||||| ||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  36545134 aatggtgtcattcctaatcctatcatgtctagtcttaccactcatccaacacaacatcctcatctctgctacacttacttgattctcatgttga 36545041  T

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Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 15215566 - 15215658
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||||||||| ||||| || |||||||||||| |||||| | ||||||||| ||||| |||   ||||||||| ||||||||||    
T  15215566 aatggtgtcatttctaatcctatcctgtatagtcttaccactcatccagcacaacatcctcatctccgcttcacttactttactctcgtgttg 15215658  T

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Target: chr8; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 29520647 - 29520583
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 322  Q
    |||||| |||||||||||| |||||  ||||||||||||||||||||||||||||||||| ||||    
T  29520647 aatggtatcatttctaatcctatcccatctagtcttaccacacatccaacgcaacatcctcatct 29520583  T

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Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 258 - 344
Target Start/End: Complemental strand, 40813309 - 40813223
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctc 344  Q
    ||||||||||||  ||||| |||   ||||||||||||||| |||||||| ||||||||||||||| ||||  ||||||||||||||    
T  40813309 aatggtgtcattcttaatcctattatgtctagtcttaccactcatccaacacaacatcctaatctctgctacacttactttattctc 40813223  T

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Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 37077752 - 37077660
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||| |||||| ||||  ||||||| ||||||| |||||| ||||||||||| ||||| || |  ||||||| ||||||||||||    
T  37077752 aatggtgtcattcctaatcctatctcgtctagttttaccactcatccagcgcaacatcctcatctccgccacacttacttgattctcgtgttg 37077660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 32043577 - 32043522
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaaca 313  Q
    |||| |||||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  32043577 aatgttgtcatttctaattctatcccgtctagtcttaccacacatccaacgcaaca 32043522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 317
Target Start/End: Complemental strand, 36069630 - 36069571
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 317  Q
    |||| |||| ||||||||| ||||| |||||||||||||||||||||||| |||||||||    
T  36069630 aatgttgtcgtttctaatcttatcccgtctagtcttaccacacatccaacacaacatcct 36069571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 12492137 - 12492230
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||||||||  ||||| ||||  ||||||||||||||| |||||||||||||||||| || || ||||  ||||| | |||||| ||||||    
T  12492137 aatggtgtcattcataatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatatctgctacacttacatgattctcatgttga 12492230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 285 - 350
Target Start/End: Original strand, 45512818 - 45512883
Alignment:
Q  285 tctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||||||||||||||| ||||| || ||||| |||| ||||| |||||| ||||||||    
T  45512818 tctagtcttaccacacatccaacgaaacattctcatctccgctatgcttattttattttcgtgttg 45512883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 2796544 - 2796449
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtcta--gtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||  |||||  |||||||||| |||||| ||||||||||| ||||  ||||  ||||||| |||||||||||||    
T  2796544 aatggtgtcattcctaatcctatcatgtctatagtcttaccactcatccagcgcaacatcctcatctttgctacacttacttgattctcgtgttga 2796449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 323
Target Start/End: Original strand, 13171949 - 13172009
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 323  Q
    |||||||||||||| ||||| |||||||||||| |||||||||| ||||||| || |||||    
T  13171949 tgtcatttctaatcctatcccgtctagtcttactacacatccaatgcaacattctcatctc 13172009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 349
Target Start/End: Complemental strand, 16917171 - 16917080
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 349  Q
    |||| |||||||| ||||| ||||||| | |||||||||||| |  ||||||||||| || ||||| |||| ||||| |||||| |||||||    
T  16917171 aatgttgtcatttttaatcctatccagccgagtcttaccacaaagtcaacgcaacattctcatctctgctatgcttaatttattttcgtgtt 16917080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 267 - 350
Target Start/End: Original strand, 39953568 - 39953651
Alignment:
Q  267 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||| |||||  || || ||||||||||||||||||||||||| || ||||| |||| ||| |||||||  ||||||||    
T  39953568 atttctaattatatcatgtttaatcttaccacacatccaacgcaacattctcatctctgctacgctaactttatgttcgtgttg 39953651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 259 - 350
Target Start/End: Original strand, 42854300 - 42854391
Alignment:
Q  259 atggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||| |||||| ||| | |||||||||||||||  ||||| ||||||||| | ||||| ||||  || |||||| ||||||||||    
T  42854300 atggtgtcattcctaatcctattctgtctagtcttaccacttatccagcgcaacatcgtcatctccgctacactaactttactctcgtgttg 42854391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 6510721 - 6510778
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 315  Q
    ||||||||||||||||||||||||   ||||||||||||||  ||||||| |||||||    
T  6510721 aatggtgtcatttctaatcatatctcatctagtcttaccacttatccaacacaacatc 6510778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 10080200 - 10080257
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 315  Q
    |||| |||||||||||||| ||||  |||||||||||||| ||| |||||||||||||    
T  10080200 aatgttgtcatttctaatcttatctcgtctagtcttaccaaacacccaacgcaacatc 10080257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 30783335 - 30783400
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 323  Q
    |||| |||||||||||||| |||||  ||||||||| ||||| ||||||||||| ||||| |||||    
T  30783335 aatgttgtcatttctaatcctatcctatctagtcttgccacagatccaacgcaagatcctcatctc 30783400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 44681334 - 44681387
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaa 311  Q
    |||| |||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  44681334 aatgttgtcatttctaatcttatctcgtctagtcttaccacacatccaatgcaa 44681387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 45419226 - 45419169
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 315  Q
    |||||||||||| |||||| |||||  ||||||||||||||  |||||||||||||||    
T  45419226 aatggtgtcattcctaatcttatcccttctagtcttaccactaatccaacgcaacatc 45419169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 10824464 - 10824512
Alignment:
Q  267 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 315  Q
    ||||||||||||||||  |||||||||||||||| ||||| ||||||||    
T  10824464 atttctaatcatatcccatctagtcttaccacacgtccaatgcaacatc 10824512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 13986481 - 13986389
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||| ||||||| ||||| |||||  ||||||| ||||||| ||||||  | |||||||| ||||| |||| |||||| | ||||||||||||    
T  13986481 aatgatgtcattcctaattatatctcgtctagtattaccactcatccagtgtaacatcctcatctccgctatgcttacctgattctcgtgttg 13986389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 18125162 - 18125070
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||||||||| ||||  |||| |||||  ||| |||||| |||||||| || ||||| ||||  ||||||| |||||| |||||    
T  18125162 aatggtgtcatttctaatcctatcatgtctcgtcttgtcactcatccagcgcaacatgctcatctccgctacacttacttgattctcatgttg 18125070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 28300407 - 28300471
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 322  Q
    |||| |||||||||||||| ||||   ||||||||||| ||||||||||| ||||||||| ||||    
T  28300407 aatgttgtcatttctaatcttatctcatctagtcttactacacatccaacacaacatcctcatct 28300471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 30748446 - 30748354
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||| |||||||||||||| ||||  ||||| ||| ||||||||||||||| |||||||| || || |||| || || |||||| || |||||    
T  30748446 aatgttgtcatttctaatcctatcatgtctaatctaaccacacatccaacgaaacatcctcatatctgctacgcctaatttattatcatgttg 30748354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 2518691 - 2518742
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 314  Q
    |||||||||||||| ||||   |||||||||||||||||||||| |||||||    
T  2518691 tgtcatttctaatcctatctcatctagtcttaccacacatccaatgcaacat 2518742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 328
Target Start/End: Original strand, 30456537 - 30456576
Alignment:
Q  289 gtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  30456537 gtcttaccacacatccaacgcaacatcctcatctctgcta 30456576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 29735767 - 29735701
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||||  |||||||| ||||||||| |||||  ||| ||||| || ||||||||||||    
T  29735767 gtctagtcttaccattcatccaacacaacatcctcatctccactacgcttatttcattctcgtgttg 29735701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 268 - 350
Target Start/End: Complemental strand, 36143346 - 36143264
Alignment:
Q  268 tttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||| ||||   ||||||||||||||||  ||||| ||||||||| ||||| |||| | | | |||||||||||||||    
T  36143346 tttctaatcctatctcatctagtcttaccacacgaccaacacaacatcctcatctctgctacgttgattttattctcgtgttg 36143264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 16351377 - 16351320
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatc 315  Q
    |||| ||||||||||||   ||| | |||||||||||||||| |||||||||||||||    
T  16351377 aatgttgtcatttctaactctattccgtctagtcttaccacatatccaacgcaacatc 16351320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 33511340 - 33511271
Alignment:
Q  265 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggctta 334  Q
    |||||||||||||||||   | ||||||||||||||||| | ||||||||||| || || |||| |||||    
T  33511340 tcatttctaatcatatctcatatagtcttaccacacatcaagcgcaacatcctcatttctgctatgctta 33511271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 350
Target Start/End: Complemental strand, 43732527 - 43732462
Alignment:
Q  285 tctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||||||||||||||| |||||||| || || |||| || ||  ||||||| ||||||    
T  43732527 tctagtcttaccacacatccaacgtaacatcctcatttctgctacgcatatcttattcttgtgttg 43732462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 44681386 - 44681435
Alignment:
Q  273 aatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 322  Q
    |||||||| | |||||||||||||||||||||||  ||||||||| ||||    
T  44681386 aatcatattccgtctagtcttaccacacatccaatacaacatcctcatct 44681435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 18752168 - 18752260
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||  |||||| |||   ||||||||||| ||| ||| || |||||||| || ||||| ||||  ||||||||| ||||||||||    
T  18752168 aatggtgtcatccctaatcctattatgtctagtcttaacactcattcagcgcaacattctcatctccgctacacttactttactctcgtgttg 18752260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 21121145 - 21121105
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccac 298  Q
    ||||||| ||||||||||| ||||| |||||||||||||||    
T  21121145 aatggtgccatttctaatcctatcccgtctagtcttaccac 21121105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 3e-19; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 1275252 - 1275159
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| || |  ||||||||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||| ||||||    
T  1275252 aatggtgtcattcctaatcctaccatgtctagtcttaccactcatccaacgcaacatcctcatctctgctatgcttacttgattctcatgttga 1275159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 10639284 - 10639191
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||| | ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  10639284 aatggtgtcattcctaatcctattctgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 10639191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 12492682 - 12492775
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||| ||||||||||||||| ||||||||| |||||||| ||||| ||||  ||||||| |||||| ||||||    
T  12492682 aatggtgtcattcctaatcttatcctgtctagtcttaccactcatccaacgtaacatcctcatctctgctacacttacttgattctcatgttga 12492775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 1287884 - 1287977
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||| ||||||| |||||| ||||  ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  1287884 aatgatgtcattcctaatcctatcatgtctagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 1287977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 16347673 - 16347765
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||| |||||| |||||||||   ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||| | ||||||||||    
T  16347673 aatggtttcatttttaatcatatattgtctagtcttaccactcatccaacgcaacatcctcatctccgctacacttacttaactctcgtgttg 16347765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 2075769 - 2075862
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||| ||||||| |||||| ||||  |||||||||||| || |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  2075769 aatgttgtcattcctaatcctatcttgtctagtcttacaactcatccaacgcaacatcctcatctctgctacacttacttaattctcatgttga 2075862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 24178497 - 24178404
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||||||||  ||||| ||||  || |||||||||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  24178497 aatggtgtcattcttaatcctatcatgtatagtcttaccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 24178404  T

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Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 21952338 - 21952274
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatct 322  Q
    |||| |||||||||||||| ||||  ||||||||||||||||||| |||||||||||||| ||||    
T  21952338 aatgctgtcatttctaatcttatctcgtctagtcttaccacacatgcaacgcaacatcctcatct 21952274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 323
Target Start/End: Complemental strand, 7678467 - 7678402
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 323  Q
    |||| |||||||||||||| |||||  ||||||||| ||||| ||||||||||||||||| |||||    
T  7678467 aatgttgtcatttctaatcctatcctatctagtcttgccacagatccaacgcaacatcctcatctc 7678402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 20318969 - 20318881
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||||||||     |||||| |||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||    
T  20318969 aatggtgtcattcctaatcctatccagtct-----taccactcatccaacgcaacatcctcatctctgctacacttacttgattctcatgttga 20318881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 34194799 - 34194856
Alignment:
Q  266 catttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 323  Q
    ||||||||||| ||||| ||||||| |||||||||||||||| |||||||||| ||||    
T  34194799 catttctaatcctatcctgtctagttttaccacacatccaacacaacatcctattctc 34194856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 9235056 - 9235000
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 314  Q
    |||| |||||||| ||||| ||||| ||||||||||||||||||||||| |||||||    
T  9235056 aatgttgtcatttataatcctatcccgtctagtcttaccacacatccaatgcaacat 9235000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 349
Target Start/End: Complemental strand, 5305603 - 5305512
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 349  Q
    |||| ||| |||||||||  ||||  |||||||||||||||||||||||||||||||||   |||  ||||  |||| ||||||||||||||    
T  5305603 aatgttgttatttctaattctatcttgtctagtcttaccacacatccaacgcaacatccccgtctttgctattcttattttattctcgtgtt 5305512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 27998384 - 27998345
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcctaatctc 323  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  27998384 gtctagtcttaccacacatccaacgcaacatcctcatctc 27998345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 263 - 350
Target Start/End: Complemental strand, 30588435 - 30588348
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||||||||||   | |  ||||||||||||||| ||||||||||||  ||||  ||| ||||| |||||||||||||||    
T  30588435 tgtcatttctaatcatatctcatttgatcttaccacacatcccacgcaacatccttgtctccactatgcttattttattctcgtgttg 30588348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 11002716 - 11002786
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggcta 328  Q
    |||| |||||||||||||  |||||  ||| ||||||||||||||||| ||||||||||| ||||| ||||    
T  11002716 aatgttgtcatttctaattctatcccatctcgtcttaccacacatccagcgcaacatcctcatctctgcta 11002786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 285 - 350
Target Start/End: Complemental strand, 21093736 - 21093671
Alignment:
Q  285 tctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    |||||||||||||||||| |||||||||||||| || ||  |||  |||| |||||||||||||||    
T  21093736 tctagtcttaccacacatacaacgcaacatcctcatatccactacacttattttattctcgtgttg 21093671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 28186963 - 28187028
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 323  Q
    |||| |||||||||||||| || |  ||||||||||||||||||||||| ||||||| || |||||    
T  28186963 aatgttgtcatttctaatcctaccatgtctagtcttaccacacatccaatgcaacattctcatctc 28187028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 28977152 - 28977245
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    |||||||||||| |||||| ||||   |||||| ||||||| |||||||| |||||| || ||||| ||||  ||||||| |||||| ||||||    
T  28977152 aatggtgtcattcctaatcctatcatttctagttttaccactcatccaacacaacatactcatctctgctacacttacttgattctcatgttga 28977245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 32516545 - 32516460
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattct 343  Q
    |||| ||||||||||||   ||||| |||||||||||||||||||||||| ||||||| | ||||| | || |  |||||||||||    
T  32516545 aatgttgtcatttctaagtctatcctgtctagtcttaccacacatccaacacaacatcatcatctccgttacgtgtactttattct 32516460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 34272988 - 34272923
Alignment:
Q  279 atccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctc 344  Q
    |||| ||||||||||||||| ||||||| |||||||||| ||||| ||||  ||||||| ||||||    
T  34272988 atcctgtctagtcttaccactcatccaatgcaacatcctcatctctgctacacttacttgattctc 34272923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 263 - 344
Target Start/End: Complemental strand, 36200764 - 36200683
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctc 344  Q
    ||||||| |||||| |||||  | |||||||||| | |||||||||||||||||| ||||| | || |||||||| ||||||    
T  36200764 tgtcattcctaatcttatcctatttagtcttaccgctcatccaacgcaacatcctcatctctgatacgcttacttgattctc 36200683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 317
Target Start/End: Original strand, 43558135 - 43558168
Alignment:
Q  284 gtctagtcttaccacacatccaacgcaacatcct 317  Q
    ||||||||||||||||||||||||||||||||||    
T  43558135 gtctagtcttaccacacatccaacgcaacatcct 43558168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 6888975 - 6888931
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaac 307  Q
    |||||||||||||||||||   |||||||||||||||||||||||    
T  6888975 tgtcatttctaatcatatctcatctagtcttaccacacatccaac 6888931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 26884984 - 26885040
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacat 314  Q
    |||||||| ||| |||||| ||||| ||||||| ||||||| |||||||||||||||    
T  26884984 aatggtgttattcctaatcctatcccgtctagttttaccactcatccaacgcaacat 26885040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 4496368 - 4496310
Alignment:
Q  261 ggtgtcatttctaatcatatccagt--ctagtcttaccacacatccaacgcaacatcct 317  Q
    ||||||||| |||||| ||||| ||  ||||||||||||| ||||||||||||||||||    
T  4496368 ggtgtcattcctaatcctatcctgtgtctagtcttaccactcatccaacgcaacatcct 4496310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 317
Target Start/End: Original strand, 6368220 - 6368279
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcct 317  Q
    |||| |||||||||||||  ||||  ||||| |||||||||||||| |||||||||||||    
T  6368220 aatgttgtcatttctaattctatctcgtctattcttaccacacatctaacgcaacatcct 6368279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 349
Target Start/End: Original strand, 5848401 - 5848462
Alignment:
Q  288 agtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgtt 349  Q
    ||||||||||||||||||| |||||||||| ||||| ||||  |||| |||| |||| ||||    
T  5848401 agtcttaccacacatccaatgcaacatcctcatctctgctacacttattttactctcatgtt 5848462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 334
Target Start/End: Original strand, 10083041 - 10083109
Alignment:
Q  265 tcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggctta 334  Q
    |||||||||||  ||||| ||||||||||||||||||| ||| |||||||||| ||| | |||| |||||    
T  10083041 tcatttctaattctatcccgtctagtcttaccacacat-caaagcaacatcctcatccctgctacgctta 10083109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 17340732 - 17340797
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 323  Q
    |||||||||||| ||||||| ||    |||||| ||||||| |||||||||||||||||| |||||    
T  17340732 aatggtgtcattcctaatcacatttcttctagttttaccactcatccaacgcaacatccttatctc 17340797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 348
Target Start/End: Original strand, 41110041 - 41110126
Alignment:
Q  263 tgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgt 348  Q
    |||||||||||||| ||| |  |||||||| || ||||||||| ||||||||  | ||||  |||| ||||| |||||||||||||    
T  41110041 tgtcatttctaatcctattccatctagtctcactacacatccagcgcaacattttcatctttgctacgcttattttattctcgtgt 41110126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 3301831 - 3301751
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttacttt 338  Q
    ||||||| |||| |||||| ||||  ||||||||||||||| |||| | ||||||||||  ||||| ||||  ||||||||    
T  3301831 aatggtgacattcctaatcctatcatgtctagtcttaccactcatcaagcgcaacatccccatctccgctacacttacttt 3301751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 374 - 413
Target Start/End: Original strand, 4991042 - 4991082
Alignment:
Q  374 ttatctttcgttataaaa-tagcttatacacaaacacttat 413  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  4991042 ttatcttttgttataaaaatagcttatacacaaacacttat 4991082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 267 - 343
Target Start/End: Complemental strand, 28676577 - 28676501
Alignment:
Q  267 atttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattct 343  Q
    ||||||||||||||| |||||| | ||||| || |||| |  ||||||||| ||||  |||| ||||||||||||||    
T  28676577 atttctaatcatatctagtctaattttaccgcatatcccattcaacatcctcatcttcgctatgcttactttattct 28676501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 31636213 - 31636261
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaa 306  Q
    |||| |||||||| ||||  |||||||||||||||||||||| ||||||    
T  31636213 aatgctgtcatttataattctatccagtctagtcttaccacaaatccaa 31636261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 323
Target Start/End: Original strand, 86902 - 86967
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctc 323  Q
    ||||||||||||||||||| |||||  ||| |||||||||| |||||| ||||||||||| |||||    
T  86902 aatggtgtcatttctaatcttatcctttctggtcttaccactcatccagcgcaacatcctcatctc 86967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 4567 - 4660
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||||||||| ||||| ||||  ||||||||||||||  |||||||||||||||||| || || | ||   |||||| |||||||||||||    
T  4567 aatggtgtcatttataatcctatcatgtctagtcttaccattcatccaacgcaacatcctcatatctgttaaatttacttgattctcgtgttga 4660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 259 - 351
Target Start/End: Original strand, 11894 - 11986
Alignment:
Q  259 atggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttga 351  Q
    ||||||||||| |||||| |||   ||||||||||||| | |||||| ||||||||||| ||||| ||||  | ||||| |||||| ||||||    
T  11894 atggtgtcattcctaatcctattatgtctagtcttaccgctcatccagcgcaacatcctcatctctgctacacatacttgattctcatgttga 11986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 350
Target Start/End: Complemental strand, 82708 - 82616
Alignment:
Q  258 aatggtgtcatttctaatcatatccagtctagtcttaccacacatccaacgcaacatcctaatctcggctaggcttactttattctcgtgttg 350  Q
    ||||||||||||  ||||| ||||  |||||||||||| || ||||||  |||||||||| ||||| |||   ||||||| |||||| |||||    
T  82708 aatggtgtcattcttaatcctatcatgtctagtcttactactcatccagtgcaacatcctcatctccgctgcacttacttgattctcatgttg 82616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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