View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11545_high_4 (Length: 318)
Name: NF11545_high_4
Description: NF11545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11545_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 76 - 297
Target Start/End: Original strand, 12165328 - 12165549
Alignment:
| Q |
76 |
attattagtagtattatatcttaccataggcagcagggttattaagaatatcaccaaagacaccataagtgtttccatatacaaacttggcatcagaatg |
175 |
Q |
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| T |
12165328 |
attattagtagtattaaatcttaccataggcagcagggttattaagaatatcaccaaagacaccataagtgtttccatatacaaacttggcatcagaatg |
12165427 |
T |
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| Q |
176 |
gtctctgttgaactgctccaccattgatctgagtcctccattgtaagttccaaccatctgatttactgaatccacacaccttcctggtggggcaaatcca |
275 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12165428 |
gtctctgttgaactgctccaccattgatctgagtcctccattgtaagttccaaccatctgatttactgaatccacacaccttcctggtggggcaaatcca |
12165527 |
T |
|
| Q |
276 |
ttagctctttgattaggaatgc |
297 |
Q |
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|||||||||||||||||||||| |
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| T |
12165528 |
ttagctctttgattaggaatgc |
12165549 |
T |
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