View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11546_high_23 (Length: 242)
Name: NF11546_high_23
Description: NF11546
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11546_high_23 |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 6 - 226
Target Start/End: Complemental strand, 46721801 - 46721581
Alignment:
| Q |
6 |
accggttcctccatcacctacaaggacaagcttgaaagtgggatagttaacaatttgctgctgagggagagcctgtatagaaacaggaaaaaccaaaaag |
105 |
Q |
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| T |
46721801 |
accggttcctccatcacctacaaggacaagcttgaaagtgggatagttaacaatttgctgctgagggagagcctgtatagaaacaggaaaaaccaaaaag |
46721702 |
T |
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| Q |
106 |
cattatatttatatatgtatatgaatatacaaatacaatgaagcaatgaaggttagagtgaaaaagaaacatgaatcgagaagttaatttgcttaattac |
205 |
Q |
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| T |
46721701 |
cattatatttatatatgtatatgaatatacaaatacaatgaagcaatgaaggttagagtgaaaaagaaacatgaatcgagaagttaatttgcttaattac |
46721602 |
T |
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| Q |
206 |
catgaaattgaacgaatgaat |
226 |
Q |
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| T |
46721601 |
catgaaattgaacgaatgaat |
46721581 |
T |
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