View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11547_low_18 (Length: 254)
Name: NF11547_low_18
Description: NF11547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11547_low_18 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 156; Significance: 6e-83; HSPs: 21)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 3 - 242
Target Start/End: Complemental strand, 30677435 - 30677196
Alignment:
| Q |
3 |
tatgtcgagagaaataagttccaaataccttaaatgaattaaactccctagtgatggcatctggataaaggatgtgcgtaaaacccgaagagaatggtat |
102 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| |
|
|
| T |
30677435 |
tatgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagtgatggcatccggataaaggatgtgcataaaacccgaagagaaaggtat |
30677336 |
T |
 |
| Q |
103 |
gttgggaagtaatcaagtttttctcgggaataagaactcaactgaaacaatgttcgcaaggattcaacttttttgaaagcattctcatcgaaggataaaa |
202 |
Q |
| |
|
||||||||| ||||| |||||| | ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||| | |
|
|
| T |
30677335 |
gttgggaagaaatcatgtttttttttggaataataactcaactgaaacaatgttctcaaggattcaacttttttgaaagcattcttatcaaaggataaca |
30677236 |
T |
 |
| Q |
203 |
agttgttgctatcaaaaccaatgtggtgtgtgctttttga |
242 |
Q |
| |
|
||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
30677235 |
agtctttgaggtcaaaaccaatgtggtgtgtgctttttga |
30677196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 4 - 242
Target Start/End: Complemental strand, 30242638 - 30242400
Alignment:
| Q |
4 |
atgtcgagagaaataagttccaaataccttaaatgaattaaactccctagtgatggcatctggataaaggatgtgcgtaaaacccgaagagaatggtatg |
103 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
30242638 |
atgtcaagagaacgaagttccaaataccttaaatgaattaaactccctagtgatggcatccggataaaggatgtgcataaaacccgaagagaaaggtatg |
30242539 |
T |
 |
| Q |
104 |
ttgggaagtaatcaagtttttctcgggaataagaactcaactgaaacaatgttcgcaaggattcaacttttttgaaagcattctcatcgaaggataaaaa |
203 |
Q |
| |
|
||||||||| |||| |||||| | || |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||| || |
|
|
| T |
30242538 |
ttgggaagttatcatgtttttttttggcataataactcaactgaaacaatgttctcaaggattcaacttttttgaaagcattcttatcaaaggataacaa |
30242439 |
T |
 |
| Q |
204 |
gttgttgctatcaaaaccaatgtggtgtgtgctttttga |
242 |
Q |
| |
|
|| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
30242438 |
gtctttgtagtcaaaaccaatgtggtgtgtgctttttga |
30242400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 30749494 - 30749718
Alignment:
| Q |
18 |
aagttccaaataccttaaatgaattaaactccctagtgatggcatctggataaaggatgtgcgtaaaacccgaagagaatggtatgttgggaagtaatca |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
30749494 |
aagttccaaataccttaaatgaattaaactccctagtgatggcatctggataaaggatgtgcgtaaaacccgaagagaaaggtttgttgggaagtaatca |
30749593 |
T |
 |
| Q |
118 |
agtttttctcgggaataagaact---caactgaaacaatgttcgcaaggattcaacttttttgaaagcattctcatcgaaggataaaaagttgttgctat |
214 |
Q |
| |
|
|||||||| || || ||| ||||| |||| |||||||||||||||||||| |||||||||||| || ||||||||||| ||| ||| | | |
|
|
| T |
30749594 |
tgtttttcttttgacaaaatactacacaactcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacgagtcgttattgt |
30749693 |
T |
 |
| Q |
215 |
caaaaccaatgtggtgtgtgctttt |
239 |
Q |
| |
|
|||||| ||| |||||||||||||| |
|
|
| T |
30749694 |
caaaactaatatggtgtgtgctttt |
30749718 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 242
Target Start/End: Original strand, 29872037 - 29872252
Alignment:
| Q |
18 |
aagttccaaataccttaaatgaattaaactccctagtgatggcatctggataaaggatgtgcgtaaaacccgaagagaatggtatgttgggaagtaatca |
117 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||| || ||||||||| |||||| | |||| |||||||| |||| |
|
|
| T |
29872037 |
aagtcccaaataccttaaatgaattaaactccccagtgatggcatccggataaaggatgcgcataaaacccggagagaaagatatgctgggaagttatca |
29872136 |
T |
 |
| Q |
118 |
agtttttctcgggaataagaactcaactgaaacaatgttcgcaaggattcaacttttttgaaagcattctcatcgaaggataaaaagttgttgctatcaa |
217 |
Q |
| |
|
|||||| | || || || ||||| |||||||||| ||||||||||||||||||||||||||| ||||| |||||||| | |||| | |||| |
|
|
| T |
29872137 |
tgttttttttggtaagaataactc------aacaatgttctcaaggattcaacttttttgaaagcattttcatcaaaggataacactttgtag---tcaa |
29872227 |
T |
 |
| Q |
218 |
aaccaatgtggtgtgtgctttttga |
242 |
Q |
| |
|
| |||||||||||||||||||||| |
|
|
| T |
29872228 |
caacaatgtggtgtgtgctttttga |
29872252 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 18 - 242
Target Start/End: Original strand, 30060220 - 30060447
Alignment:
| Q |
18 |
aagttccaaataccttaaatgaattaaactccctagtgatggcatct-ggataaaggatgtgcgtaaaacccgaagagaatggtatgttgggaagtaatc |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| ||||| ||| ||||||||| | ||| |||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
30060220 |
aagttccaaataccttaaatgaattaaactacctagtaatggc-tctcggataaaggttatgcataaaacccgaagagaaaggtttgttgggaagtaatc |
30060318 |
T |
 |
| Q |
117 |
aagtttttctcgggaataagaact---caactgaaacaatgttcgcaaggattcaacttttttgaaagcattctcatcgaaggataaaaagttgttgcta |
213 |
Q |
| |
|
| |||||||| ||| ||| ||| |||| |||| |||||||||||||||||||| |||||||||||| || ||||||||||| ||| || | |
|
|
| T |
30060319 |
atgtttttcttttgaaaaagtactacaaaactcaaaccatgttcgcaaggattcaactattttgaaagcatccttgtcgaaggataacgagtctttattg |
30060418 |
T |
 |
| Q |
214 |
tcaaaaccaatgtggtgtgtgctttttga |
242 |
Q |
| |
|
||||||| ||||||||||||||||||||| |
|
|
| T |
30060419 |
tcaaaactaatgtggtgtgtgctttttga |
30060447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 30338645 - 30338550
Alignment:
| Q |
147 |
aaacaatgttcgcaaggattcaacttttttgaaagcattctcatcgaaggataaaaagttgttgctatcaaaaccaatgtggtgtgtgctttttga |
242 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30338645 |
aaacaaagttcgcaaggattcaacttttttgaaagcattttcatcgaaggataaaaagttgttgctgtcaaaaccaatgtggtgtgtgctttttga |
30338550 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 30206376 - 30206531
Alignment:
| Q |
18 |
aagttccaaataccttaaatgaattaaactccctagtgatggcatctggataaaggatgtgcgtaaaacccgaagagaatggtatgttgggaagtaatca |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||| ||| ||| |||||| |||||||| |
|
|
| T |
30206376 |
aagttccaaataccttaaatgaattaaactccctagtgatggtacctggataaaggatgtgcataaaacccgaagggaacggtttgttggcgagtaatca |
30206475 |
T |
 |
| Q |
118 |
agtttttctcgggaataagaactcaactgaaacaatgttcgcaaggattcaacttt |
173 |
Q |
| |
|
||||| | || ||| | |||||||||||||||||| ||||||||||||||| |
|
|
| T |
30206476 |
tgttttgttttggtgtaatgattcaactgaaacaatgttctcaaggattcaacttt |
30206531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 147 - 242
Target Start/End: Original strand, 30483387 - 30483482
Alignment:
| Q |
147 |
aaacaatgttcgcaaggattcaacttttttgaaagcattctcatcgaaggataaaaagttgttgctatcaaaaccaatgtggtgtgtgctttttga |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| | ||||||||||||||||||||||||||| |
|
|
| T |
30483387 |
aaacaatgttcgcaaggattcaacttttttgaaagcattttcatcgaaggataaaaatttcttgctgttaaaaccaatgtggtgtgtgctttttga |
30483482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 30399913 - 30400110
Alignment:
| Q |
3 |
tatgtcgagagaaataagttccaaataccttaaatgaattaaactccctagtgatggcatctggataaaggatgtgcgtaaaacccgaagagaatggtat |
102 |
Q |
| |
|
|||||| ||| ||| ||| |||||||||||||||||||||||||| |||||| ||||| | ||||||||| ||||| |||||||||||||||| ||| | |
|
|
| T |
30399913 |
tatgtcaagataaagaagctccaaataccttaaatgaattaaactacctagtaatggcccccggataaaggttgtgcataaaacccgaagagaagggtct |
30400012 |
T |
 |
| Q |
103 |
gttgggaagtaatcaagtttttctcgggaataagaactcaactgaaacaatgttcgcaaggattcaacttttttgaaagcattctcatcgaaggataa |
200 |
Q |
| |
|
|||||||||||||| ||| |||| | | ||| | |||| |||| ||||||||||||||||||||||| |||| ||| ||||||||| ||||| |
|
|
| T |
30400013 |
gttgggaagtaatcctgttcttcttttggaaaagtagaaaactcaaaccatgttcgcaaggattcaacttttctgaaggcaccctcatcgaatgataa |
30400110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 17418412 - 17418243
Alignment:
| Q |
18 |
aagttccaaataccttaaatgaattaaactccctagtgatggcatctggataaaggatgtgcgtaaaacccgaagagaatggtatgttgggaagtaatca |
117 |
Q |
| |
|
|||||| ||||||| |||||||||||||||| ||||||| || | ||||| | ||||||||| |||||||||||||||||||| | |||| |||| ||| |
|
|
| T |
17418412 |
aagttctaaataccataaatgaattaaactctctagtgagggtacctggagagaggatgtgcataaaacccgaagagaatggtttcttggcaagtggtca |
17418313 |
T |
 |
| Q |
118 |
agtttttctcgggaataagaactcaactgaaacaatgttcgcaaggattcaacttttttgaaagcattctcat |
190 |
Q |
| |
|
||||| || | || || || |||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
17418312 |
tgttttggtctg--ttatgatct-aactgaaacaatgttcgcaaggattcaacttttttgaaggcatcctcat |
17418243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30483238 - 30483286
Alignment:
| Q |
1 |
tctatgtcgagagaaataagttccaaataccttaaatgaattaaactcc |
49 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
30483238 |
tctatgtcaagataaataagttccaaataccttaaatgaattaaactcc |
30483286 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30338794 - 30338746
Alignment:
| Q |
1 |
tctatgtcgagagaaataagttccaaataccttaaatgaattaaactcc |
49 |
Q |
| |
|
|||||||| ||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
30338794 |
tctatgtcaagataagtaagttccaaataccttaaatgaattaaactcc |
30338746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 29853147 - 29853201
Alignment:
| Q |
3 |
tatgtcgagagaaataagttccaaataccttaaatgaattaaactccctagtgat |
57 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
29853147 |
tatgtcaagagaacgaagttccaaataccttaaatgaattaaactttctagtgat |
29853201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 241
Target Start/End: Original strand, 29853295 - 29853388
Alignment:
| Q |
148 |
aacaatgttcgcaaggattcaacttttttgaaagcattctcatcgaaggataaaaagttgttgctatcaaaaccaatgtggtgtgtgctttttg |
241 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||| ||||||||| ||||| || || | | | ||||| ||||||||||||||||||| |
|
|
| T |
29853295 |
aacaatgttcgcaaggattcaacttttttaaaggcaccctcatcgaatgataacaaattatcggagttaaaacttatgtggtgtgtgctttttg |
29853388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 30435799 - 30435852
Alignment:
| Q |
147 |
aaacaatgttcgcaaggattcaacttttttgaaagcattctcatcgaaggataa |
200 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||| ||||||||| ||||| |
|
|
| T |
30435799 |
aaacaatgttcgtaaggattcaacttttttgaaggcaccctcatcgaatgataa |
30435852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 30713548 - 30713495
Alignment:
| Q |
147 |
aaacaatgttcgcaaggattcaacttttttgaaagcattctcatcgaaggataa |
200 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||| ||||||||| ||||| |
|
|
| T |
30713548 |
aaacaatgttcgtaaggattcaacttttttgaaggcaccctcatcgaatgataa |
30713495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 49
Target Start/End: Original strand, 30435673 - 30435704
Alignment:
| Q |
18 |
aagttccaaataccttaaatgaattaaactcc |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
30435673 |
aagttccaaataccttaaatgaattaaactcc |
30435704 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 30521751 - 30521712
Alignment:
| Q |
144 |
ctgaaacaatgttcgcaaggattcaacttttttgaaagca |
183 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
30521751 |
ctgaaacaatgttcgcaacgattcaacttttgtgaaagca |
30521712 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 30562091 - 30562052
Alignment:
| Q |
144 |
ctgaaacaatgttcgcaaggattcaacttttttgaaagca |
183 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
30562091 |
ctgaaacaatgttcgcaacgattcaacttttgtgaaagca |
30562052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 179
Target Start/End: Complemental strand, 30331252 - 30331222
Alignment:
| Q |
149 |
acaatgttcgcaaggattcaacttttttgaa |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
30331252 |
acaatgttcgcaaggattcaacttttttgaa |
30331222 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 30713671 - 30713600
Alignment:
| Q |
21 |
ttccaaataccttaaatgaattaaactccctagtgatggcatctggataaaggatgtgcgtaaaacccgaagaga |
95 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||| | ||| | ||||||||||| |||||| |||||||| |
|
|
| T |
30713671 |
ttccaaataccttaaatgaattaaactccata---ctgggacctgtagaaaggatgtgcttaaaactcgaagaga |
30713600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 237
Target Start/End: Complemental strand, 20296839 - 20296615
Alignment:
| Q |
22 |
tccaaataccttaaatgaattaaactccctagtgatggcatctggataaaggatgtgcgtaaaacccgaagagaatggtatgttgggaagtaatcaagtt |
121 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||| ||||||||||||||| ||| |||||||| ||||||| | | |
|
|
| T |
20296839 |
tccaaataccttaaatgaattaaactctctagtgatcgcacatgggtaaaggatgtgcgcaaaacccgaagagaaaggtttgttgggatgtaatcatgat |
20296740 |
T |
 |
| Q |
122 |
tttctcgggaataa-ga--------actcaactgaaacaatgttcgcaaggattcaacttttttgaaagcattctcatcgaaggataaaaagttgttgct |
212 |
Q |
| |
|
| | ||||||| || ||||||||||||||||||||||||||||||||||| |||||| ||| || | || |||||| |||| || |
|
|
| T |
20296739 |
ctattttggaataatgatgataatcactcaactgaaacaatgttcgcaaggattcaacttctttgaaggcacccttgttgatggataacaagtctgtgta |
20296640 |
T |
 |
| Q |
213 |
atcaaaaccaatgtggtgtgtgctt |
237 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
20296639 |
gtcaaaaccaatgtggtgtgtgctt |
20296615 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 26707195 - 26707350
Alignment:
| Q |
18 |
aagttccaaataccttaaatgaattaaactccctagtgatggcatctggataaaggatgtgcgtaaaacccgaagagaatggtatgttgggaagtaatca |
117 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| | |||| ||||||| ||||||||||||||| ||| | |||||||| |||| |
|
|
| T |
26707195 |
aagttccaaataccttaaatgaattaagctccctagtgataatacctgg------gatgtgcataaaacccgaagagagcggtttaatgggaagtgatca |
26707288 |
T |
 |
| Q |
118 |
agtttttctcgggaataagaactcaactgaaacaatgttcgcaaggattcaacttttttgaa |
179 |
Q |
| |
|
| |||| | |||||||| |||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
26707289 |
tggttttttggggaataattcttcaagtcaaacaatgttcgcaaggattcaacttttttgaa |
26707350 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 25294136 - 25294022
Alignment:
| Q |
3 |
tatgtcgagagaaataagttccaaataccttaaatgaattaaactccctagtgatggcatctggataaaggatgtgcgtaaaacccgaagagaatggtat |
102 |
Q |
| |
|
|||||| |||||| |||| |||||||||||||||||||||| || |||| |||||| | |||||||||||||||| |||||| |||||| || ||| | |
|
|
| T |
25294136 |
tatgtcaagagaataaagtgccaaataccttaaatgaattaagcttcctattgatggtacttggataaaggatgtgcataaaactcgaagacaacggttt |
25294037 |
T |
 |
| Q |
103 |
gttgggaagtaatca |
117 |
Q |
| |
|
|||| ||||| |||| |
|
|
| T |
25294036 |
gttgagaagtgatca |
25294022 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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