View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11547_low_20 (Length: 241)

Name: NF11547_low_20
Description: NF11547
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11547_low_20
NF11547_low_20
[»] chr7 (21 HSPs)
chr7 (19-241)||(2026777-2026998)
chr7 (34-241)||(20020229-20020434)
chr7 (19-241)||(26090497-26090717)
chr7 (31-241)||(11300206-11300413)
chr7 (28-241)||(12404522-12404734)
chr7 (34-241)||(2280457-2280662)
chr7 (31-241)||(5187855-5188063)
chr7 (19-241)||(25157874-25158096)
chr7 (61-241)||(49149307-49149486)
chr7 (39-241)||(17468822-17469028)
chr7 (39-241)||(17584186-17584392)
chr7 (19-241)||(2389096-2389317)
chr7 (19-241)||(13454298-13454518)
chr7 (19-241)||(21756744-21756967)
chr7 (19-241)||(37379337-37379558)
chr7 (44-241)||(11835573-11835768)
chr7 (61-241)||(40923559-40923738)
chr7 (198-241)||(12460947-12460990)
chr7 (36-91)||(13594265-13594319)
chr7 (19-75)||(37284782-37284838)
chr7 (39-83)||(30603379-30603423)
[»] chr4 (32 HSPs)
chr4 (19-241)||(23436497-23436718)
chr4 (19-241)||(15471117-15471338)
chr4 (19-241)||(13481371-13481591)
chr4 (19-241)||(43251512-43251731)
chr4 (26-241)||(7355616-7355825)
chr4 (26-241)||(7358609-7358818)
chr4 (34-241)||(17667426-17667631)
chr4 (31-241)||(26395036-26395244)
chr4 (19-241)||(21396170-21396392)
chr4 (19-241)||(5938286-5938503)
chr4 (40-241)||(36036207-36036404)
chr4 (61-241)||(54845494-54845671)
chr4 (19-235)||(45143057-45143274)
chr4 (19-235)||(45151826-45152043)
chr4 (19-241)||(34771588-34771810)
chr4 (61-241)||(47872970-47873147)
chr4 (36-123)||(39266758-39266846)
chr4 (156-241)||(2973350-2973435)
chr4 (19-241)||(11209096-11209317)
chr4 (19-241)||(11936458-11936679)
chr4 (19-241)||(35463121-35463343)
chr4 (19-241)||(11202941-11203162)
chr4 (47-142)||(20888846-20888942)
chr4 (47-142)||(20894465-20894561)
chr4 (156-241)||(19128978-19129063)
chr4 (156-233)||(21880969-21881046)
chr4 (36-91)||(44657603-44657657)
chr4 (36-91)||(50081763-50081817)
chr4 (36-91)||(44663532-44663586)
chr4 (19-75)||(1583431-1583487)
chr4 (61-142)||(37880924-37881004)
chr4 (39-83)||(52500064-52500108)
[»] chr2 (14 HSPs)
chr2 (19-241)||(40584882-40585102)
chr2 (25-241)||(35244512-35244728)
chr2 (31-239)||(4072109-4072314)
chr2 (32-241)||(71992-72198)
chr2 (31-241)||(21604169-21604377)
chr2 (19-241)||(22013614-22013831)
chr2 (19-241)||(27036652-27036874)
chr2 (19-241)||(24427343-24427567)
chr2 (19-241)||(2386424-2386647)
chr2 (114-241)||(17593064-17593193)
chr2 (61-241)||(35584713-35584892)
chr2 (198-241)||(11465551-11465594)
chr2 (206-241)||(45027939-45027974)
chr2 (39-83)||(27729074-27729118)
[»] scaffold0279 (1 HSPs)
scaffold0279 (19-241)||(6245-6465)
[»] chr3 (17 HSPs)
chr3 (25-241)||(12271940-12272154)
chr3 (31-241)||(17596130-17596337)
chr3 (25-241)||(38742325-38742536)
chr3 (31-241)||(3554258-3554466)
chr3 (34-241)||(3783343-3783548)
chr3 (84-241)||(51854386-51854541)
chr3 (50-241)||(14845743-14845932)
chr3 (118-241)||(9772538-9772661)
chr3 (39-241)||(48775178-48775382)
chr3 (36-123)||(21452384-21452472)
chr3 (36-123)||(21457558-21457646)
chr3 (113-241)||(16332209-16332339)
chr3 (61-146)||(16832758-16832843)
chr3 (41-241)||(50656601-50656799)
chr3 (156-233)||(9692070-9692147)
chr3 (156-233)||(15374109-15374186)
chr3 (38-91)||(2499614-2499666)
[»] chr8 (30 HSPs)
chr8 (25-241)||(20890586-20890800)
chr8 (19-241)||(3697035-3697255)
chr8 (19-241)||(4979728-4979949)
chr8 (31-241)||(850914-851121)
chr8 (19-241)||(6587529-6587752)
chr8 (31-241)||(238650-238857)
chr8 (32-241)||(33828736-33828942)
chr8 (31-241)||(13362477-13362685)
chr8 (31-241)||(213397-213604)
chr8 (31-241)||(727020-727227)
chr8 (31-241)||(799521-799728)
chr8 (31-241)||(1050042-1050249)
chr8 (19-241)||(27345122-27345342)
chr8 (64-241)||(752420-752595)
chr8 (32-241)||(36800962-36801168)
chr8 (31-241)||(14563011-14563217)
chr8 (32-241)||(35033245-35033451)
chr8 (34-241)||(37879242-37879447)
chr8 (19-241)||(23116616-23116839)
chr8 (34-241)||(28980097-28980300)
chr8 (34-241)||(28985317-28985520)
chr8 (19-241)||(7004598-7004816)
chr8 (96-241)||(14747082-14747222)
chr8 (19-241)||(40144793-40145014)
chr8 (141-241)||(792113-792212)
chr8 (19-241)||(25702059-25702271)
chr8 (19-241)||(16267377-16267597)
chr8 (19-241)||(16259003-16259223)
chr8 (156-241)||(14417200-14417285)
chr8 (39-83)||(35540613-35540657)
[»] chr6 (21 HSPs)
chr6 (41-241)||(7237891-7238090)
chr6 (32-241)||(21896834-21897040)
chr6 (34-241)||(11583004-11583209)
chr6 (31-241)||(15332661-15332869)
chr6 (31-241)||(17309076-17309284)
chr6 (39-241)||(8070237-8070437)
chr6 (34-241)||(34134483-34134688)
chr6 (39-241)||(27766771-27766976)
chr6 (19-241)||(19097223-19097446)
chr6 (61-241)||(95059-95236)
chr6 (39-143)||(24412010-24412115)
chr6 (44-241)||(22405973-22406168)
chr6 (155-241)||(29158528-29158614)
chr6 (185-241)||(10464879-10464936)
chr6 (185-241)||(10471401-10471458)
chr6 (200-241)||(15299019-15299060)
chr6 (36-91)||(24362170-24362224)
chr6 (36-91)||(24368745-24368799)
chr6 (19-75)||(4106270-4106325)
chr6 (185-241)||(17208420-17208478)
chr6 (19-95)||(29158621-29158697)
[»] scaffold0001 (2 HSPs)
scaffold0001 (19-241)||(519484-519703)
scaffold0001 (19-241)||(513067-513286)
[»] chr1 (29 HSPs)
chr1 (19-241)||(20292081-20292301)
chr1 (19-241)||(52990128-52990348)
chr1 (25-241)||(20298759-20298973)
chr1 (31-241)||(52399647-52399854)
chr1 (63-241)||(24065671-24065847)
chr1 (31-241)||(26739630-26739837)
chr1 (31-241)||(17378818-17379026)
chr1 (34-241)||(39190220-39190425)
chr1 (33-241)||(11387359-11387565)
chr1 (33-241)||(27694027-27694233)
chr1 (19-167)||(42625688-42625836)
chr1 (118-241)||(9269346-9269469)
chr1 (39-241)||(36917182-36917388)
chr1 (71-241)||(21948855-21949023)
chr1 (71-241)||(21962416-21962584)
chr1 (38-123)||(20578552-20578636)
chr1 (38-123)||(20586246-20586330)
chr1 (44-147)||(29597367-29597470)
chr1 (156-241)||(42625568-42625651)
chr1 (157-241)||(11385342-11385426)
chr1 (44-241)||(33684740-33684935)
chr1 (19-241)||(37674744-37674965)
chr1 (19-241)||(37681437-37681658)
chr1 (184-241)||(24849513-24849571)
chr1 (153-241)||(38133643-38133731)
chr1 (36-91)||(1527308-1527362)
chr1 (36-91)||(36212519-36212573)
chr1 (36-91)||(36213378-36213432)
chr1 (39-83)||(18417689-18417733)
[»] chr5 (23 HSPs)
chr5 (19-241)||(22500345-22500568)
chr5 (19-241)||(22506923-22507146)
chr5 (19-241)||(18565991-18566210)
chr5 (32-241)||(14615497-14615703)
chr5 (32-241)||(22248780-22248986)
chr5 (31-241)||(11994492-11994700)
chr5 (19-241)||(19507443-19507660)
chr5 (34-241)||(7508599-7508804)
chr5 (34-241)||(24795599-24795804)
chr5 (34-241)||(24800966-24801171)
chr5 (34-241)||(14882899-14883104)
chr5 (34-241)||(14889576-14889781)
chr5 (39-241)||(16775586-16775793)
chr5 (61-241)||(596632-596811)
chr5 (41-241)||(19800888-19801084)
chr5 (41-241)||(37565463-37565653)
chr5 (37-123)||(24007697-24007784)
chr5 (19-241)||(33535706-33535927)
chr5 (19-146)||(7774167-7774294)
chr5 (61-232)||(20989741-20989915)
chr5 (185-241)||(29747233-29747290)
chr5 (36-91)||(10685652-10685706)
chr5 (19-75)||(20340107-20340163)
[»] scaffold0118 (1 HSPs)
scaffold0118 (19-241)||(1832-2051)
[»] scaffold0103 (1 HSPs)
scaffold0103 (19-241)||(24340-24560)
[»] scaffold0022 (1 HSPs)
scaffold0022 (19-241)||(103695-103914)
[»] scaffold0188 (1 HSPs)
scaffold0188 (19-241)||(5175-5392)
[»] scaffold0137 (1 HSPs)
scaffold0137 (32-241)||(19526-19732)
[»] scaffold0266 (1 HSPs)
scaffold0266 (39-241)||(14507-14710)
[»] scaffold0075 (1 HSPs)
scaffold0075 (19-239)||(24451-24668)
[»] scaffold1426 (1 HSPs)
scaffold1426 (26-241)||(361-576)
[»] scaffold0606 (1 HSPs)
scaffold0606 (32-241)||(185-390)
[»] scaffold1752 (1 HSPs)
scaffold1752 (19-159)||(97-235)
[»] scaffold0068 (1 HSPs)
scaffold0068 (27-241)||(65835-66039)
[»] scaffold0310 (2 HSPs)
scaffold0310 (69-146)||(7223-7300)
scaffold0310 (72-146)||(12412-12486)
[»] scaffold0560 (1 HSPs)
scaffold0560 (118-241)||(1642-1764)
[»] scaffold0088 (1 HSPs)
scaffold0088 (118-241)||(31281-31403)
[»] scaffold0214 (2 HSPs)
scaffold0214 (198-241)||(15903-15946)
scaffold0214 (198-241)||(28399-28442)
[»] scaffold0113 (2 HSPs)
scaffold0113 (39-136)||(18702-18799)
scaffold0113 (61-136)||(14692-14766)
[»] scaffold1517 (1 HSPs)
scaffold1517 (185-241)||(505-562)
[»] scaffold0041 (1 HSPs)
scaffold0041 (61-241)||(49357-49536)
[»] scaffold0191 (1 HSPs)
scaffold0191 (198-241)||(6302-6345)
[»] scaffold0031 (1 HSPs)
scaffold0031 (39-142)||(74666-74769)
[»] scaffold0363 (1 HSPs)
scaffold0363 (156-241)||(1434-1519)
[»] scaffold0466 (1 HSPs)
scaffold0466 (19-75)||(10777-10832)
[»] scaffold0154 (1 HSPs)
scaffold0154 (36-91)||(18977-19031)


Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 2026777 - 2026998
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2026777 ggatgagaattattatattatattattgttgttttcctttccatgtatcgaattttggaacttgttgatgtggccctttgttggtcgacttattgttgtt 2026876  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2026877 taggcttaatgccaagatgttattggagacttaaaccgttgttgttgttattg-aaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 2026975  T
Q  219 tgaattaaatagttttattttct 241  Q
    |||||||| ||||||||||||||    
T  2026976 tgaattaagtagttttattttct 2026998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 34 - 241
Target Start/End: Original strand, 20020229 - 20020434
Alignment:
Q  34 tattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaa 133  Q
    |||||||||||||||||||||||    ||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  20020229 tattatattattgttgttttcctacctatgtatcaatttttggaacttgttgatgtggccctttgttggttgacttattgttgattaggcttaatgccaa 20020328  T
Q  134 gatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||| ||||||| ||  ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||  |||||||||||||||||||    
T  20020329 gatgttgttggagaatttaaccgttgttgttgttattg-aaatgc-aaactttccgctgcatgattttgaagttattaaacatgttgaattaaatagttt 20020426  T
Q  234 tattttct 241  Q
    ||||||||    
T  20020427 tattttct 20020434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 26090497 - 26090717
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||||||| |||||||||||||||||| | || | ||||||| | ||||| |||||| |||||||||||||||||||| || || |||||||    
T  26090497 ggatgggaattattat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggccctttgttggttgattt-ttgttgt 26090594  T
Q  118 ttaggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatg 217  Q
    ||||||||||||||| ||| || ||||||| ||| | |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||    
T  26090595 ttaggcttaatgccaggatattgttggagatttaaatcgttgtggttgttattgaaa-tgcaaaactttccgctgcattattttgaagttatgactgatg 26090693  T
Q  218 ttgaattaaatagttttattttct 241  Q
    ||||||||||||||||||||||||    
T  26090694 ttgaattaaatagttttattttct 26090717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 31 - 241
Target Start/End: Original strand, 11300206 - 11300413
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||| ||||||  | ||||||| |||| || |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  11300206 ttatattattttattgttgctttcctcct-atgtatcaaattctggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 11300303  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatag 230  Q
    || ||| || ||||||| ||||| |||||| ||||||||||||| |||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  11300304 caggatattgttggagatttacatcgttgtggttgttattgaaa-tgcaaaactttccgctacattattttgaagttatgactgatgttgaattaaatag 11300402  T
Q  231 ttttattttct 241  Q
    |||||||||||    
T  11300403 ttttattttct 11300413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 28 - 241
Target Start/End: Original strand, 12404522 - 12404734
Alignment:
Q  28 ttattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttg-ttggtcgacttattgttgtttaggctta 126  Q
    ||||| |||||| | ||||||||||||| || |||||||| ||||||| |||||||||||||||||||||  ||||   |||||||||||||||||||||    
T  12404522 ttattttattatttcattgttgttttcccttccatgtatcaaattttggaacttgttgatgtggccctttcattggctaacttattgttgtttaggctta 12404621  T
Q  127 atgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatgatgttgaatta 225  Q
    ||| ||||||||| ||||||| ||| | | |||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  12404622 atgtcaagatgttgttggaga-ttaaaacattgttgttgttattgaaa-tgcaaa-ctttccgctgcatgatttttgaagttatgaatgatgttgaatta 12404718  T
Q  226 aatagttttattttct 241  Q
    ||||||||||||||||    
T  12404719 aatagttttattttct 12404734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 34 - 241
Target Start/End: Complemental strand, 2280662 - 2280457
Alignment:
Q  34 tattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaa 133  Q
    |||||| | ||||||||||||| || |||||||| ||||||| |||||||||||||| || ||  ||||   |||| |||||||||||||||||||||||    
T  2280662 tattatttcattgttgttttcccttccatgtatcaaattttggaacttgttgatgtgccctttcattggctaactt-ttgttgtttaggcttaatgccaa 2280564  T
Q  134 gatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||| ||||||| ||| |   ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| || ||||||||||||||||||    
T  2280563 gatgttgttggaga-ttaaaatattgttgttgctattgaaaatgcaaaactttccgctgcattaatttgaagttatgactgttgttgaattaaatagttt 2280465  T
Q  234 tattttct 241  Q
    ||||||||    
T  2280464 tattttct 2280457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 31 - 241
Target Start/End: Original strand, 5187855 - 5188063
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttg-ttggtcgacttattgttgtttaggcttaatg 129  Q
    ||||||||| |||||||||||||| |  | ||||||| | ||||| |||||||||||||||||||||  ||||   ||||||||| ||||||||||||||    
T  5187855 ttatattattttattgttgttttcttcct-atgtatcaatttttggaacttgttgatgtggccctttcattggctaacttattgtcgtttaggcttaatg 5187953  T
Q  130 ccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaat 228  Q
    |||||||||| ||||||| ||| | | |||||||||||||||||| |||||| ||||||||||||| | | ||||||||||| |||||||||||||||||    
T  5187954 ccaagatgttgttggaga-ttaaaacattgttgttgttattgaaa-tgcaaa-ctttccgctgcataaatattgaagttatggatgatgttgaattaaat 5188050  T
Q  229 agttttattttct 241  Q
    |||||||||||||    
T  5188051 agttttattttct 5188063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 25158096 - 25157874
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||| ||||||||||||||||||||||   ||||||| | ||||| |||||| |||||||||||||||||||  || ||||||||| |    
T  25158096 ggatgggaattattat-ttatattattgttgttttccttcctatgtatcaatttttggaacttgatgatgtggccctttgttggatgatttattgttg-t 25157999  T
Q  119 taggcttaatgccaagatgttat-tggag-acttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatga-ttttgaagttatgaatga 215  Q
    ||||||| |||||||||| |||| ||||| | ||  ||||||||||| ||||||  |||||| ||| |||||||||||||| ||||||||||||| | ||    
T  25157998 taggctttatgccaagatattatatggagaattttaaccgttgttgtggttatttgaaatgc-aaattttccgctgcatgatttttgaagttatggacga 25157900  T
Q  216 tgttgaattaaatagttttattttct 241  Q
    |||||| |||||||||||||||||||    
T  25157899 tgttgagttaaatagttttattttct 25157874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 61 - 241
Target Start/End: Complemental strand, 49149486 - 49149307
Alignment:
Q  61 atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgtta-ttggagactt--acaccgt 157  Q
    ||||||| | ||||| |||||| ||||||| ||||| |||||| || ||||||||||| ||||||||||||||||| ||| ||||||| ||  |||| ||    
T  49149486 atgtatcaatttttggaacttgatgatgtgaccctt-gttggttgatttattgttgtt-aggcttaatgccaagatattaattggagattttaacacagt 49149389  T
Q  158 tgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||| |||||| ||||||||||||||||||||||    
T  49149388 tgttgttgttattgaaa-tgcaaa-ctttccgctgcataattttgaggttatgattgatgtcgaattaaatagttttattttct 49149307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 241
Target Start/End: Original strand, 17468822 - 17469028
Alignment:
Q  39 tattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatg 137  Q
    ||||||||||||||| | || | ||||||| | ||||| |||||  ||||||||||||| |||||| || ||||||||||||||||||||||| |||||     
T  17468822 tattattgttgtttttccttcctatgtatcaatttttggaacttaatgatgtggccctt-gttggttgatttattgttgtttaggcttaatgcaaagata 17468920  T
Q  138 ttatt-ggaga-cttacaccgttgttgttgttattga---aaatgcaaaactttccgctgcatgatttt-gaagttatgaatgatgttgaattaaatagt 231  Q
    || || ||||| |||| ||||||||||||||| ||     ||||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  17468921 ttgtttggagaactta-accgttgttgttgttgttatgtgaaatgcaaa-cattccgctgcatgattttcgaagttatgaaagatgttgaattaaatagt 17469018  T
Q  232 tttattttct 241  Q
    ||||||||||    
T  17469019 tttattttct 17469028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 241
Target Start/End: Complemental strand, 17584392 - 17584186
Alignment:
Q  39 tattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatg 137  Q
    ||||||||||||||| | || | ||||||| | ||||| |||||  ||||||||||||| |||||| || ||||||||||||||||||||||| |||||     
T  17584392 tattattgttgtttttccttcctatgtatcaatttttggaacttaatgatgtggccctt-gttggttgatttattgttgtttaggcttaatgcaaagata 17584294  T
Q  138 ttatt-ggaga-cttacaccgttgttgttgttattga---aaatgcaaaactttccgctgcatgatttt-gaagttatgaatgatgttgaattaaatagt 231  Q
    || || ||||| |||| ||||||||||||||| ||     ||||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  17584293 ttgtttggagaactta-accgttgttgttgttgttatgtgaaatgcaaa-cattccgctgcatgattttcgaagttatgaaagatgttgaattaaatagt 17584196  T
Q  232 tttattttct 241  Q
    ||||||||||    
T  17584195 tttattttct 17584186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 2389096 - 2389317
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||| ||| |||||||||||||||||| | || | |||| || | ||||| |||||| |||||||||||||||||||| ||  |||||||||    
T  2389096 ggatgggaattactat-ttatattattgttgtttttccttcctatgtttcaatttttggaacttgatgatgtggccctttgttggttga--tattgttgt 2389192  T
Q  118 ttaggcttaatgccaagatgttatt-ggag-acttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatg 214  Q
    | |||||| ||||||||||  |||| |||| | ||  ||||||||||| ||||||  ||||||||| ||||||||||||| ||||| || ||||||||||    
T  2389193 t-aggctttatgccaagatactatttggaggattttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataatttttgaggttatgaatg 2389290  T
Q  215 atgttgaattaaatagttttattttct 241  Q
    |||| || |||||||||||||||||||    
T  2389291 atgtcgatttaaatagttttattttct 2389317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 13454298 - 13454518
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||| ||| |||||||||||||||||| | || | ||||||| | ||||| |||| | ||||||||||||||| |||| ||  |||||||||    
T  13454298 ggatgagaattactat-ttatattattgttgtttttccttcctatgtatcaatttttggaact-gatgatgtggccctttgatggttga--tattgttgt 13454393  T
Q  118 ttaggcttaatgccaagatgttatt-ggag-acttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatg 214  Q
    | |||||| |||||||||| ||||| |||| | ||  ||||||||||| ||||||  ||||||||| ||||||||||||| ||||| || ||||||||||    
T  13454394 t-aggctttatgccaagatattatttggaggattttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataatttttgaggttatgaatg 13454491  T
Q  215 atgttgaattaaatagttttattttct 241  Q
    |||| || |||||||||||||||||||    
T  13454492 atgtcgatttaaatagttttattttct 13454518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 21756967 - 21756744
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggcccttt-gttggtcgacttattgttg 116  Q
    ||||| |||||| ||| |||||||||||||||||| | || | ||||||| | ||||| |||||| |||||||||||||| | |||| ||  ||||||||    
T  21756967 ggatgggaattactat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggcccttttgatggttga--tattgttg 21756871  T
Q  117 tttaggcttaatgccaagatgttatt-ggag-acttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttg--aagttatgaa 212  Q
    || |||||| |||||||||| ||||| |||| | ||  ||||||||||| ||||||  ||||||||| ||||||||||||| |||||   | ||||||||    
T  21756870 tt-aggctttatgccaagatattatttggaggattttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataatttttttaggttatgaa 21756773  T
Q  213 tgatgttgaattaaatagttttattttct 241  Q
    |||||| || |||||||||||||||||||    
T  21756772 tgatgtcgatttaaatagttttattttct 21756744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 37379558 - 37379337
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||| ||| |||||||||||||||||| | || | ||||||| | ||||| |||||| ||||| ||||||||| |||| ||  |||||||||    
T  37379558 ggatgggaattactat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgcggccctttgatggttga--tattgttgt 37379462  T
Q  118 ttaggcttaatgccaagatgttat--tggagacttaca-ccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaat 213  Q
    | ||||||| ||||||||| ||||  |||||  ||  | |||||||||| ||||||  ||||||||| ||||||||||||| ||||| || |||||||||    
T  37379461 t-aggctta-tgccaagatattatgttggaggtttttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataatttttgaggttatgaat 37379365  T
Q  214 gatgttgaattaaatagttttattttct 241  Q
    ||||| || |||||||||||||||||||    
T  37379364 gatgtcgatttaaatagttttattttct 37379337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 241
Target Start/End: Complemental strand, 11835768 - 11835573
Alignment:
Q  44 ttgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttattg 143  Q
    |||||||||||||  | ||||||| ||||||| |||||| ||||||||||||||| |||| ||  | |||||||| |||||| || ||||||  |||||     
T  11835768 ttgttgttttcctcct-atgtatc-aattttggaacttgatgatgtggccctttgatggttga--tgttgttgtt-aggctttataccaagaaattattt 11835674  T
Q  144 gag--acttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt--gaagttatgaatgatgttgaattaaatagttttatttt 239  Q
    ||   | ||  ||||||||||| |||||| ||||||||||  |||||||||||| |||||  |||||||| ||  |||||||||||||||||||||||||    
T  11835673 gaagaattttaaccgttgttgtggttatttaaaatgcaaat-tttccgctgcataatttttggaagttattaaacatgttgaattaaatagttttatttt 11835575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 241
Target Start/End: Original strand, 40923559 - 40923738
Alignment:
Q  61 atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgtta-ttggag-acttacaccgtt 158  Q
    ||||||| | ||||| |||||| ||||||||||||||| |||| ||  |||||||| |||||| | |||||||||| ||| |||||| | ||  ||||||    
T  40923559 atgtatcaatttttggaacttgatgatgtggccctttgatggttga--tattgttg-ttaggcgttatgccaagatattatttggagaattttaaccgtt 40923655  T
Q  159 gttgttgttattgaaaatgcaaaactttccgctgcatgat-tttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||| ||| ||  |||||| |||||||||||| ||| || ||||||||||  ||  |||||||||||||||| ||||||||||    
T  40923656 gttgtggttgtttgaaatgc-aaactttccgctacataatctttgaagttaataaacatgttgaattaaatagctttattttct 40923738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 12460990 - 12460947
Alignment:
Q  198 ttttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  12460990 ttttgaagttatgaaagatgttgaattaaatagttttattttct 12460947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 13594319 - 13594265
Alignment:
Q  36 ttatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtgg 91  Q
    ||||||||||||||||| | ||| |||||||||||||||| |||||||||||||||    
T  13594319 ttatattattgttgttt-cttttccatgtatcgaattttggaacttgttgatgtgg 13594265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 37284838 - 37284782
Alignment:
Q  19 ggatgtgaattattatattatattattgttg-ttttccttttcatgtatcgaattttg 75  Q
    ||||| |||||||||| |||||||||||||| ||||||||| |||||||| |||||||    
T  37284838 ggatgggaattattat-ttatattattgttgtttttcctttccatgtatcaaattttg 37284782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 30603379 - 30603423
Alignment:
Q  39 tattattgttgttttccttttcatgtatcgaattttgaaacttgt 83  Q
    ||||||||||| |||||||| |||||||| ||||||| |||||||    
T  30603379 tattattgttgctttcctttccatgtatcaaattttggaacttgt 30603423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 23436497 - 23436718
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23436497 ggatgggaattattatattatattattgttgttttcctttccatgtatcgaattttggaacttgttgatgtggccctttgttggtcgacttattgttgtt 23436596  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23436597 taggcttaacgccaagatgttattggagacttaaaccgttgttgttgttattg-aaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 23436695  T
Q  219 tgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||    
T  23436696 tgaattaaatagttttattttct 23436718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 15471117 - 15471338
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggcccttt-gttggtcgacttattgttgt 117  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| ||||||||||| ||||||||    
T  15471117 ggatgggaattattatattatattattgttgttttcctttccatgtatcaaattttggaacttgttgatgtggcccttttgttggtcgactcattgttgt 15471216  T
Q  118 ttaggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatg 217  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| |||||    
T  15471217 ttaggcttaatgccaagatattgttggagacttaaaccgttgttgttgttattg-aaatgc-aaactttccgctgcatgatttttaagttatgactgatg 15471314  T
Q  218 ttgaattaaatagttttattttct 241  Q
    ||||||||||||| ||||||||||    
T  15471315 ttgaattaaatagctttattttct 15471338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 13481371 - 13481591
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| ||||||||||||||||||||||||||||||||    ||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||| |    
T  13481371 ggatgggaattattatattatattattgttgttttcctacctatgtatcaatttttggaacttgttgatgtggccctttgttggttgacttattgttgat 13481470  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||||||||||||||||||| ||||||| ||  ||||| |||||| |||||| |||||| |||||||||||||||||||||||||||||| ||  ||||    
T  13481471 taggcttaatgccaagatgttgttggagaatttaaccgtagttgttattattg-aaatgc-aaactttccgctgcatgattttgaagttattaaacatgt 13481568  T
Q  219 tgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||    
T  13481569 tgaattaaatagttttattttct 13481591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 43251731 - 43251512
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| || ||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||||||||| || |    
T  43251731 ggatgagatttattatattatattattgttgttttcctttccatgtatcaaattttggaacttgttgatgtggccc-ttgttggttgacttattgatgat 43251633  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||||||||||||||||| | |||| |||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||  ||      
T  43251632 taggcttaatgccaagatgatgttggtgacttaaaccgttgttgttgttattg-aaatgc-aaactttccgctgcatgattttgaagttattaaacataa 43251535  T
Q  219 tgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||    
T  43251534 tgaattaaatagttttattttct 43251512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 26 - 241
Target Start/End: Complemental strand, 7355825 - 7355616
Alignment:
Q  26 aattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggctt 125  Q
    ||||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||||| |||||||| ||||| ||| || ||||||||    
T  7355825 aattattat-ttatattattgttgttttcctttccatgtatcaaattttggaacttgttaatgtggccc-ttgttggttgacttgttgatgattaggctt 7355728  T
Q  126 aatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatga-ttttgaagttatgaatgatgttgaatt 224  Q
    |||||||| ||||| ||||||||||| || |||| |||  |||||  |||||| |||||||||||||||| | ||||||||||||||| |||||||| ||    
T  7355727 aatgccaaaatgttgttggagacttaaactgttgatgt--ttatt--aaatgc-aaactttccgctgcattatttttgaagttatgaacgatgttgagtt 7355633  T
Q  225 aaatagttttattttct 241  Q
    |||||||||||||||||    
T  7355632 aaatagttttattttct 7355616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 26 - 241
Target Start/End: Complemental strand, 7358818 - 7358609
Alignment:
Q  26 aattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggctt 125  Q
    ||||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||||| |||||||| ||||| ||| || ||||||||    
T  7358818 aattattat-ttatattattgttgttttcctttccatgtatcaaattttggaacttgttaatgtggccc-ttgttggttgacttgttgatgattaggctt 7358721  T
Q  126 aatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatga-ttttgaagttatgaatgatgttgaatt 224  Q
    |||||||| ||||| ||||||||||| || |||| |||  |||||  |||||| |||||||||||||||| | ||||||||||||||| |||||||| ||    
T  7358720 aatgccaaaatgttgttggagacttaaactgttgatgt--ttatt--aaatgc-aaactttccgctgcattatttttgaagttatgaacgatgttgagtt 7358626  T
Q  225 aaatagttttattttct 241  Q
    |||||||||||||||||    
T  7358625 aaatagttttattttct 7358609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 34 - 241
Target Start/End: Complemental strand, 17667631 - 17667426
Alignment:
Q  34 tattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaa 133  Q
    |||||| | ||||||||||||| || |||||||  ||||||| |||||||||||||| || ||  ||||   |||| |||||||||||||||||||||||    
T  17667631 tattatttcattgttgttttcccttccatgtatgaaattttggaacttgttgatgtgccctttcattggctaactt-ttgttgtttaggcttaatgccaa 17667533  T
Q  134 gatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||| ||||||| ||| |   ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| || ||||||||||||||||||    
T  17667532 gatgttgttggaga-ttaaaatattgttgttgctattgaaaatgcaaaactttccgctgcattaatttgaagttatgactgttgttgaattaaatagttt 17667434  T
Q  234 tattttct 241  Q
    ||||||||    
T  17667433 tattttct 17667426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 241
Target Start/End: Complemental strand, 26395244 - 26395036
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | ||||||| | ||||| |||||   |||| |||||||||||| | ||||| |||||||||||||||||||     
T  26395244 ttatattattttattgttgttttcctcct-atgtatcaatttttggaacttaacgatggggccctttgttgtttgactt-ttgttgtttaggcttaatgt 26395147  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaata 229  Q
    || ||| || ||||||| ||| |  ||||| ||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  26395146 caggatattgttggagatttaaattgttgtggttgttattgaaa-tgcaaaactttccgctgcataattattgaagttatgaatgatgttgaactaaata 26395048  T
Q  230 gttttattttct 241  Q
    ||||||||||||    
T  26395047 gttttattttct 26395036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 21396392 - 21396170
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||| ||||||||||||||||||||||   ||||||| | ||||| |||||| ||||||||||| |||||||| || ||||||||| |    
T  21396392 ggatgggaattattat-ttatattattgttgttttccttcctatgtatcaatttttggaacttgatgatgtggcccgttgttggttgatttattgttg-t 21396295  T
Q  119 taggcttaatgccaagatgttat-tggag-acttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatga-ttttgaagttatgaatga 215  Q
    ||||||| | |||||||| |||| ||||| | ||  ||||||||||| ||||||  |||||| |||||||||||||||||| ||||||||||||| | ||    
T  21396294 taggctttaggccaagatattatatggagaattttaaccgttgttgtggttatttgaaatgc-aaactttccgctgcatgatttttgaagttatggacga 21396196  T
Q  216 tgttgaattaaatagttttattttct 241  Q
    |||||| |||||||||||||||||||    
T  21396195 tgttgagttaaatagttttattttct 21396170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 5938503 - 5938286
Alignment:
Q  19 ggatgtgaattattatattatattattgttgtttt-ccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||||||| |||||||| || |||||| ||||| |||||||| ||||||| ||||||||||||||| |||| || ||| ||||||||| ||     
T  5938503 ggatgggaattattat-ttatattactgctgtttttcctttccatgtatcaaattttggaacttgttgatgtggtcctt-gtcggttgacttattgatga 5938406  T
Q  118 ttaggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatga-ttttgaagttatgaatgat 216  Q
    |||||||||||||||| ||||| ||||||||||| || || | |||  |||||  |||||| |||||||||||||||| | ||||||||||||||| |||    
T  5938405 ttaggcttaatgccaaaatgttgttggagacttaaactgtcgatgt--ttatt--aaatgc-aaactttccgctgcattatttttgaagttatgaacgat 5938311  T
Q  217 gttgaattaaatagttttattttct 241  Q
    ||||| |||||||||||||||||||    
T  5938310 gttgagttaaatagttttattttct 5938286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 241
Target Start/End: Complemental strand, 36036404 - 36036207
Alignment:
Q  40 attattgttgtttt-ccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgt 138  Q
    |||||||||||||| ||||| |||||||| | ||||| |||||||||||||||||||| || ||| |||||| || || |||||||||||||||||||||    
T  36036404 attattgttgtttttcctttccatgtatcaatttttggaacttgttgatgtggccctt-gtcggttgacttaatgatgattaggcttaatgccaagatgt 36036306  T
Q  139 tattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatgatgttgaattaaatagttttatt 237  Q
    | ||||| ||||| || |||| ||||  ||||  ||||||||| ||||||||||||| ||||| || |||||||||||||| || |||||||||||||||    
T  36036305 tgttggaaacttaaactgttgatgtt--tatt--aaatgcaaa-ctttccgctgcataatttttgaggttatgaatgatgtcgatttaaatagttttatt 36036211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 241
Target Start/End: Original strand, 54845494 - 54845671
Alignment:
Q  61 atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttatt-ggagacttacaccgttg 159  Q
    |||||||  |||||| ||||||||| | ||||||| || |||| || ||  ||||||| |||||| ||||||||||||| || ||||| ||  ||| |||    
T  54845494 atgtatcttattttggaacttgttgttatggccctatgatggttgaatt--tgttgtt-aggctttatgccaagatgttgtttggagaatttaacctttg 54845590  T
Q  160 ttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  54845591 ttgttgttatttgaaatgcaaa-ctttccgctgcatgattttgaagttatgaaagatgttgaattaaatagttttattttct 54845671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 235
Target Start/End: Original strand, 45143057 - 45143274
Alignment:
Q  19 ggatgtgaattattatattatattattgttgtt-ttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    |||||||||||||||| |  ||||||||| ||| ||||||   ||||||| | ||||| || ||| ||||||||||||| |||| | || ||||||||||    
T  45143057 ggatgtgaattattat-tagtattattgtcgttgttccttcctatgtatcaatttttggaatttgatgatgtggccctt-gttgattgatttattgttgt 45143154  T
Q  118 ttaggcttaatgccaagatgttatt--ggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatg 214  Q
    |||||||| |||||||||| |||||  ||||| ||  ||||||||||| ||||||  ||||||||| ||||||||||||| ||||| ||||||| |||||    
T  45143155 ttaggctttatgccaagatattattttggagaatttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataatttttgaagttacgaatg 45143253  T
Q  215 atgttgaattaaatagtttta 235  Q
    |||||||||||||||||||||    
T  45143254 atgttgaattaaatagtttta 45143274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 235
Target Start/End: Original strand, 45151826 - 45152043
Alignment:
Q  19 ggatgtgaattattatattatattattgttgtt-ttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    |||||||||||||||| |  ||||||||| ||| ||||||   ||||||| | ||||| || ||| ||||||||||||| |||| | || ||||||||||    
T  45151826 ggatgtgaattattat-tagtattattgtcgttgttccttcctatgtatcaatttttggaatttgatgatgtggccctt-gttgattgatttattgttgt 45151923  T
Q  118 ttaggcttaatgccaagatgttatt--ggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatg 214  Q
    |||||||| |||||||||| |||||  ||||| ||  ||||||||||| ||||||  ||||||||| ||||||||||||| ||||| ||||||| |||||    
T  45151924 ttaggctttatgccaagatattattttggagaatttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataatttttgaagttacgaatg 45152022  T
Q  215 atgttgaattaaatagtttta 235  Q
    |||||||||||||||||||||    
T  45152023 atgttgaattaaatagtttta 45152043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 34771810 - 34771588
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||| ||||||||||||||||||||||   ||||||| | ||||| |||||||||||||||||  | |||| | || ||| ||||| |    
T  34771810 ggatgggaattattatgttatattattgttgttttccttcctatgtatcaatttttggaacttgttgatgtggcc--tggttgattgagttactgttggt 34771713  T
Q  119 taggcttaatgccaagatgtta--ttggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcat-gattttgaagttatgaatga 215  Q
    ||||||| ||| |||||| |||  ||||||| ||  ||||||||||| ||||||  |||||  || ||||||||||| |  ||||||||| |||| ||||    
T  34771712 taggctttatgtcaagatattattttggagaatttaaccgttgttgtggttatttgaaatg-taagctttccgctgcctaaattttgaagctatggatga 34771614  T
Q  216 tgttgaattaaatagttttattttct 241  Q
    ||||||||||||||||||||||||||    
T  34771613 tgttgaattaaatagttttattttct 34771588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 61 - 241
Target Start/End: Original strand, 47872970 - 47873147
Alignment:
Q  61 atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttatt-ggagacttacaccgttg 159  Q
    |||||||  |||||| ||||||||| | |||||||||| | || ||   ||||||||| |||||| ||||||||||||| || ||||| ||  ||  |||    
T  47872970 atgtatcttattttggaacttgttgttatggccctttgatcgttgaa--attgttgtt-aggctttatgccaagatgttgtttggagaatttaactattg 47873066  T
Q  160 ttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  47873067 ttgttgttatttgaaatgcaaa-ctttccgctgcatgattttgaagttatgaaagatgatgaattaaatagttttattttct 47873147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 39266758 - 39266846
Alignment:
Q  36 ttatattattgttgtttt-ccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggc 123  Q
    |||||||||||||||||| ||||| |||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  39266758 ttatattattgttgtttttcctttccatgtatcaaattttggaacttgttgatgtggccctttgctggtcgacttattgttgtttaggc 39266846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 2973350 - 2973435
Alignment:
Q  156 gttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    |||||||||||||||  ||||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  2973350 gttgttgttgttatttgaaatgcaaa-cattccgctgcatgatttttgaagttatgaaagatgttgaattaaatagttttattttct 2973435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 11209096 - 11209317
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||| ||| |||||||||||||||||| | || | ||||||| | ||||| |||||| ||||||||||||||| || | ||  |||||||||    
T  11209096 ggatgggaattactat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggccctttgatgattga--tattgttgt 11209192  T
Q  118 ttaggcttaatgccaagatgttat--tggagacttaca-ccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaat 213  Q
    | ||||||| ||||||||| ||||  |||||  ||  | |||||||||| ||||||  ||||||||| ||||||||||||| ||||| || |||||||||    
T  11209193 t-aggctta-tgccaagatattatgttggaggtttttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataatttttgaggttatgaat 11209289  T
Q  214 gatgttgaattaaatagttttattttct 241  Q
    ||||| || |||||||||||||||||||    
T  11209290 gatgtcgatttaaatagttttattttct 11209317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 11936679 - 11936458
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||| ||| |||||||||||||||||| | || | ||||||| | ||||| |||||| ||||||||||||||| |||| ||  |||||||||    
T  11936679 ggatgggaattaatat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggccctttgatggttga--tattgttgt 11936583  T
Q  118 ttaggcttaatgccaagatgttat--tggagacttaca-ccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaat 213  Q
    | || |||| ||||||||| ||||  |||||  ||  | |||||||||| ||||||  ||||||||| ||||||||||||| ||||| || |||||||||    
T  11936582 t-agactta-tgccaagatattatgttggaggtttttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataatttttgaggttatgaat 11936486  T
Q  214 gatgttgaattaaatagttttattttct 241  Q
    ||||| || |||||||||||||||||||    
T  11936485 gatgtcgatttaaatagttttattttct 11936458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 35463121 - 35463343
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggcccttt-gttggtcgacttattgttg 116  Q
    ||||| |||||| ||| |||||||||||||||||| | || | ||||||| | ||||| |||||| |||||||||||||| | |||| ||  ||||||||    
T  35463121 ggatgggaattactat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggcccttttgatggttga--tattgttg 35463217  T
Q  117 tttaggcttaatgccaagatgttat--tggagacttaca-ccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaa 212  Q
    || ||||||| ||||||||| ||||  |||||  ||  | |||||||||| ||||||  ||||||||| ||||||||||||| ||||| || ||||||||    
T  35463218 tt-aggctta-tgccaagatattatgttggaggtttttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataatttttgaggttatgaa 35463314  T
Q  213 tgatgttgaattaaatagttttattttct 241  Q
    |||||| || |||||||||||||||||||    
T  35463315 tgatgtcgatttaaatagttttattttct 35463343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 11202941 - 11203162
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||| ||| |||||||||||||||||| | || | ||||||| | ||||| |||||| ||||||||||||||| || | ||  |||||||||    
T  11202941 ggatgggaattactat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggccctttgatgattga--tattgttgt 11203037  T
Q  118 ttaggcttaatgccaagatgttat--tggagacttaca-ccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaat 213  Q
    | ||||||| ||||||||| ||||  |||||  ||  | |||||||||| ||||||  ||||||||| ||||||||||||| ||||| || |||||||||    
T  11203038 t-aggctta-tgccaagatattatgttggaggtttttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataatttttgaggttatgaat 11203134  T
Q  214 gatgttgaattaaatagttttattttct 241  Q
    |||||  | |||||||||||||||||||    
T  11203135 gatgtcaatttaaatagttttattttct 11203162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 20888942 - 20888846
Alignment:
Q  47 ttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgact-tattgttgtttaggcttaatgccaagatgttatt 142  Q
    |||||||||||   ||||||| | |||||||||||| |||||||||||||||||||| || | | |||||||||||||||||||||||||| |||||    
T  20888942 ttgttttccttcctatgtatcaatttttgaaacttgatgatgtggccctttgttggttgattatgttgttgtttaggcttaatgccaagatattatt 20888846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 20894561 - 20894465
Alignment:
Q  47 ttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgact-tattgttgtttaggcttaatgccaagatgttatt 142  Q
    |||||||||||   ||||||| | |||||||||||| |||||||||||||||||||| || | | |||||||||||||||||||||||||| |||||    
T  20894561 ttgttttccttcctatgtatcaatttttgaaacttgatgatgtggccctttgttggttgattatgttgttgtttaggcttaatgccaagatattatt 20894465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 19128978 - 19129063
Alignment:
Q  156 gttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||||||   ||||||||| | ||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  19128978 gttgttgttgttatgtgaaatgcaaa-cattcagctgcatgattttcgaagttatgaaagatgttgaattaaatagttttattttct 19129063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 21881046 - 21880969
Alignment:
Q  156 gttgttgttgttattgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaatagttt 233  Q
    ||||||||||||||| | ||||||||  || ||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  21881046 gttgttgttgttatttagaatgcaaatatt-ccgctgcatgattattgaagttatgattgatgtttaattaaatagttt 21880969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 44657603 - 44657657
Alignment:
Q  36 ttatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtgg 91  Q
    ||||||||||||||||| | ||| |||||||||||||||| |||||||||||||||    
T  44657603 ttatattattgttgttt-cttttccatgtatcgaattttggaacttgttgatgtgg 44657657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 50081817 - 50081763
Alignment:
Q  36 ttatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtgg 91  Q
    ||||||||||||||||| | ||| |||||||||||||||| |||||||||||||||    
T  50081817 ttatattattgttgttt-cttttccatgtatcgaattttggaacttgttgatgtgg 50081763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 44663532 - 44663586
Alignment:
Q  36 ttatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtgg 91  Q
    ||||||||||||||||| | ||| |||| ||||||||||| |||||||||||||||    
T  44663532 ttatattattgttgttt-cttttccatgcatcgaattttggaacttgttgatgtgg 44663586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 1583487 - 1583431
Alignment:
Q  19 ggatgtgaattattatattatattattgttg-ttttccttttcatgtatcgaattttg 75  Q
    ||||| |||||||||| |||||||||||||| ||||||||| |||||||| |||||||    
T  1583487 ggatgagaattattat-ttatattattgttgtttttcctttccatgtatcaaattttg 1583431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 37881004 - 37880924
Alignment:
Q  61 atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttatt 142  Q
    |||||||  ||||||||||||| || ||||||||| ||||||| || ||| ||||||| |||||| | |||||||| |||||    
T  37881004 atgtatcttattttgaaacttgatgttgtggccctatgttggttgaatta-tgttgttaaggctttacgccaagatattatt 37880924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 52500108 - 52500064
Alignment:
Q  39 tattattgttgttttccttttcatgtatcgaattttgaaacttgt 83  Q
    ||||||||||| |||||||| |||||||| ||||||| |||||||    
T  52500108 tattattgttgctttcctttccatgtatcaaattttggaacttgt 52500064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 183; Significance: 4e-99; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 40585102 - 40584882
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  40585102 ggatgagaattattatattatattattgttgttctcctttccatgtatcgaattttggaacttgttgatgtggccctttgttggtcgacttattgttg-t 40585004  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40585003 taggcttaatgccaagatgttattggagacttaaacagttgttgttgttattg-aaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 40584905  T
Q  219 tgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||    
T  40584904 tgaattaaatagttttattttct 40584882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 25 - 241
Target Start/End: Original strand, 35244512 - 35244728
Alignment:
Q  25 gaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggct 124  Q
    |||||||||||||||||||||||||||||||||   ||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||| |||||||    
T  35244512 gaattattatattatattattgttgttttccttcctatgtatcaatttttggaacttgttgatgtggccctttgttggttgacttattgttgattaggct 35244611  T
Q  125 taatgccaagatgttattggagacttacacc---gttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttga 221  Q
    | ||||||||||||| ||||||| ||  |||   |||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||  |||||||    
T  35244612 t-atgccaagatgttgttggagaatttaaccgttgttgttgttgttattg-aaatgc-aaactttccgctgcatgattttgaagttattaaacatgttga 35244708  T
Q  222 attaaatagttttattttct 241  Q
    ||||||||||||||||||||    
T  35244709 attaaatagttttattttct 35244728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 31 - 239
Target Start/End: Original strand, 4072109 - 4072314
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| |||||||||||||| |  | ||||||| ||||||| |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  4072109 ttatattattttattgttgttttcatcct-atgtatcaaattttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 4072206  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatag 230  Q
    || ||| || ||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  4072207 caggatattgttggagatttacatcgttgtggttgttattgaaa-tgcaaaactttccgctgcattattttgaagttatgactgatgttgaattaaatag 4072305  T
Q  231 ttttatttt 239  Q
    |||||||||    
T  4072306 ttttatttt 4072314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 32 - 241
Target Start/End: Original strand, 71992 - 72198
Alignment:
Q  32 tatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgcc 131  Q
    |||||||| ||||||||||||||||  | ||||||| | ||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  71992 tatattattttattgttgttttcctcct-atgtatcaatttttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgcc 72089  T
Q  132 aagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagt 231  Q
    | ||| || ||||||| ||| | |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  72090 aggatattgttggagatttaaatcgttgtggttgttattgaaa-tgcaaaactttccgctgcattattttgaagttatgactgatgttgaattaaatagt 72188  T
Q  232 tttattttct 241  Q
    ||||||||||    
T  72189 tttattttct 72198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 31 - 241
Target Start/End: Complemental strand, 21604377 - 21604169
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | ||||||| | ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  21604377 ttatattattttattgttgttttcctcct-atgtatcaatttttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 21604280  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaata 229  Q
    || ||| || ||||||| ||| | |||||| ||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  21604279 caggatattgttggagatttaaatcgttgtggttgttattgaaa-tgcaaaactttccgctgcataattattgaagttatgaatgatgttgaattaaata 21604181  T
Q  230 gttttattttct 241  Q
    ||||||||||||    
T  21604180 gttttattttct 21604169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 22013614 - 22013831
Alignment:
Q  19 ggatgtgaattattatattatattattgttgtttt-ccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||||||| | |||||||||||||||| ||||| |||||||| ||||||| |||||||||||||||||||| |||||| ||||||||| ||     
T  22013614 ggatgagaattattatct-atattattgttgtttttcctttccatgtatcaaattttggaacttgttgatgtggccctt-gttggttgacttattgatga 22013711  T
Q  118 ttaggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatgat 216  Q
    |||||||||||||||||||||  ||||||||||| || |||| ||||  ||||  ||||||||| ||||||||||||||||||| || ||||||||||||    
T  22013712 ttaggcttaatgccaagatgtcgttggagacttaaactgttgatgtt--tatt--aaatgcaaa-ctttccgctgcatgatttttgaggttatgaatgat 22013806  T
Q  217 gttgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||||    
T  22013807 gttgaattaaatagttttattttct 22013831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 27036874 - 27036652
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||| ||| |||||||||||||||||||||    ||||||| | ||||| |||||| |||||||||||||||||||| |  |||||||||||    
T  27036874 ggatgggaattactat-ttatattattgttgttttcctacctatgtatcaatttttggaacttgatgatgtggccctttgttggttgttttattgttgtt 27036776  T
Q  119 taggcttaatgccaagatgttat-tggagacttaca-ccgttgttgttgttattgaaaatgcaaaactttccgctgcatgat-tttgaagttatgaatga 215  Q
     |||||| |||||||||| |||| |||||| ||  | |||||||||| ||||||  ||||||||| |||||||||||||||| |||||||||||| | ||    
T  27036775 -aggctttatgccaagatattatatggagaattttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcatgatatttgaagttatggacga 27036678  T
Q  216 tgttgaattaaatagttttattttct 241  Q
    |||||| |||||||||||||||||||    
T  27036677 tgttgagttaaatagttttattttct 27036652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 24427343 - 24427567
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcga--attttgaaacttgttgatgtggccctttgttggtcgacttattgttg 116  Q
    ||||| |||||||||| ||||||||||||||||||||||   ||||||| |   ||||| |||||| |||||||||||||||||||| || |||||||||    
T  24427343 ggatgggaattattat-ttatattattgttgttttccttcctatgtatcaatttttttggaacttgatgatgtggccctttgttggttgatttattgttg 24427441  T
Q  117 tttaggcttaatgccaagatgttat-tggag-acttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatga-ttttgaagttatgaat 213  Q
     |||||||| |||||||||| |||| ||||| | ||  ||||||||||| ||||||  |||||| |||||||||||||||||| ||||||||||||| |     
T  24427442 -ttaggctttatgccaagatattatatggagaattttaaccgttgttgtggttatttgaaatgc-aaactttccgctgcatgatttttgaagttatggac 24427539  T
Q  214 gatgttgaattaaatagttttattttct 241  Q
    |||||||  |||||||||||||||||||    
T  24427540 gatgttgggttaaatagttttattttct 24427567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 2386424 - 2386647
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||||||| |||||||||||||||||| | || | ||||||| | ||||| |||||| |||||||||||||||||||| || |||||||||     
T  2386424 ggatgagaattattat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggccctttgttggttgatttattgttg- 2386521  T
Q  118 ttaggcttaatgccaagatgttat-tggag-acttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatga-ttttgaagttatgaatg 214  Q
    |||||||| |||||||||| |||| ||| | | ||  ||||||||||| ||||||  |||||| |||||||||||||||||| |||| |||||||| | |    
T  2386522 ttaggctttatgccaagatattatatggggaattttaaccgttgttgtggttatttgaaatgc-aaactttccgctgcatgatttttaaagttatggacg 2386620  T
Q  215 atgttgaattaaatagttttattttct 241  Q
    ||||||| |||||||||||||||||||    
T  2386621 atgttgagttaaatagttttattttct 2386647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 241
Target Start/End: Original strand, 17593064 - 17593193
Alignment:
Q  114 ttgtttaggcttaatgccaagatgttatt--ggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatg 210  Q
    ||||||||||||||||||||||| |||||  ||||| ||  | ||||||||||||||||  ||||||||| | ||||||||||||||||| |||||||||    
T  17593064 ttgtttaggcttaatgccaagatattattatggagaatttaatcgttgttgttgttatttgaaatgcaaa-cattccgctgcatgatttttgaagttatg 17593162  T
Q  211 aatgatgttgaattaaatagttttattttct 241  Q
    || ||||||||||||||||||||||||||||    
T  17593163 aaagatgttgaattaaatagttttattttct 17593193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 241
Target Start/End: Complemental strand, 35584892 - 35584713
Alignment:
Q  61 atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttatt-ggagacttaca-ccgtt 158  Q
    ||||||| | ||||| |||||| ||||||||||||||| |||| ||  |||||||||| |||| | |||||||||| ||||| ||||| ||  | ||| |    
T  35584892 atgtatcaatttttggaacttgatgatgtggccctttgatggttga--tattgttgtt-aggcgttatgccaagatattatttggagaattttaaccgct 35584796  T
Q  159 gttgttgttattgaaaatgcaaaactttccgctgcatgat-tttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||| ||| ||  ||||||||| ||||||||||||| || ||||||||||| ||  |||||||||||||||| ||||||||||    
T  35584795 gttgtggttgtttgaaatgcaaa-ctttccgctgcataatctttgaagttattaaacatgttgaattaaatagctttattttct 35584713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 11465594 - 11465551
Alignment:
Q  198 ttttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11465594 ttttgaagttatgaatgatgttgaattaaatagttttattttct 11465551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 206 - 241
Target Start/End: Complemental strand, 45027974 - 45027939
Alignment:
Q  206 ttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||| ||||||||||||||||||||||||||||    
T  45027974 ttatgaaagatgttgaattaaatagttttattttct 45027939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 27729118 - 27729074
Alignment:
Q  39 tattattgttgttttccttttcatgtatcgaattttgaaacttgt 83  Q
    ||||||||||| |||||||| |||||||| ||||||| |||||||    
T  27729118 tattattgttgctttcctttccatgtatcaaattttggaacttgt 27729074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 6245 - 6465
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6245 ggatgggaattattatattatattattgttgttttcctttccatgtatcaaattttggaacttgttgatgtggccctttgttggtcgacttattgttgtt 6344  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||| ||  ||||    
T  6345 taggcttaatgccaagatgttgttggagacttaaaccgttgttgttgttattg-aaatgc-aaactttccgctgcaagattttgaagttattaaacatgt 6442  T
Q  219 tgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||    
T  6443 tgaattaaatagttttattttct 6465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 2e-88; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 25 - 241
Target Start/End: Original strand, 12271940 - 12272154
Alignment:
Q  25 gaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggct 124  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12271940 gaattattatattatattattgttgttttcctttccatgtatcaaattttggaacttgttgatgtggccctttgttggtcgacttattgttgtttaggct 12272039  T
Q  125 taatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaatt 224  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||| ||  ||||||||||    
T  12272040 taatgccaagatgttgttggagacttaaaccgttgttgttgttattg-aaatgc-aaactttccgctgcaagattttgaagttattaaacatgttgaatt 12272137  T
Q  225 aaatagttttattttct 241  Q
    |||||||||||||||||    
T  12272138 aaatagttttattttct 12272154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 31 - 241
Target Start/End: Complemental strand, 17596337 - 17596130
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | ||||||| ||||||| |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  17596337 ttatattattttattgttgttttcctcct-atgtatcaaattttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 17596240  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatag 230  Q
    || ||| || ||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  17596239 caggatattgttggagatttacatcgttgtggttgttattgaaa-tgcaaaactttccgctgcattattttgaagttataactgatgttgaattaaatag 17596141  T
Q  231 ttttattttct 241  Q
    |||||||||||    
T  17596140 ttttattttct 17596130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 25 - 241
Target Start/End: Complemental strand, 38742536 - 38742325
Alignment:
Q  25 gaattattatattatattattgttgtttt-ccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggc 123  Q
    |||||||||| |||||||||||||||||| ||||| |||||||| ||||||| |||||||||||||||||||| |||||| ||||||||| || ||||||    
T  38742536 gaattattat-ttatattattgttgtttttcctttccatgtatcaaattttggaacttgttgatgtggccctt-gttggttgacttattgatgattaggc 38742439  T
Q  124 ttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatgatgttgaa 222  Q
    ||||||||| |||||| ||||||||||| ||||||||||||   |||  ||||||||| ||||||||||||||||||| ||||||||||| ||||||||     
T  38742438 ttaatgccaggatgttgttggagacttaaaccgttgttgtta--att--aaatgcaaa-ctttccgctgcatgatttttgaagttatgaacgatgttgag 38742344  T
Q  223 ttaaatagttttattttct 241  Q
    |||||||||||||||||||    
T  38742343 ttaaatagttttattttct 38742325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 31 - 241
Target Start/End: Original strand, 3554258 - 3554466
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | ||||||| | ||||| |||||  ||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  3554258 ttatattattttattgttgttttcctcct-atgtatcaatttttggaacttaatgatgtgaccctttgttggttgactt-ttgttgtttaggcttaatgc 3554355  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaata 229  Q
    || ||| || ||||||| ||| |  ||||| ||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  3554356 caggatattgttggagatttaaattgttgtggttgttattgaaa-tgcaaaactttccgctgcataattattgaagttatgaatgatgttgaattaaata 3554454  T
Q  230 gttttattttct 241  Q
    ||||||||||||    
T  3554455 gttttattttct 3554466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 34 - 241
Target Start/End: Original strand, 3783343 - 3783548
Alignment:
Q  34 tattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaa 133  Q
    |||||| | ||||||||||||| || |||||||| ||||||| |||||||||||||| || ||  ||||   |||| |||||||||||||||||||||||    
T  3783343 tattatttcattgttgttttcccttccatgtatcaaattttggaacttgttgatgtgccctttcattggctaactt-ttgttgtttaggcttaatgccaa 3783441  T
Q  134 gatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||| ||||||| ||| |   ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| || ||||||||||||||||||    
T  3783442 gatgttgttggaga-ttaaaatattgttgttgctattgaaaatgcaaaactttccgctgcattaatttgaagttatgactgttgttgaattaaatagttt 3783540  T
Q  234 tattttct 241  Q
    ||||||||    
T  3783541 tattttct 3783548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 84 - 241
Target Start/End: Original strand, 51854386 - 51854541
Alignment:
Q  84 tgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaac 183  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||||||| ||| || ||||||| ||| | |||||| ||||||||||||| ||||||||    
T  51854386 tgatgtgaccctttgttggttgactt-ttgttgtttaggcttaatgccaggatattgttggagatttaaatcgttgtggttgttattgaaa-tgcaaaac 51854483  T
Q  184 tttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    |||||||||||| ||||||||||||||| || || |||||||||||||||||||||||    
T  51854484 tttccgctgcattattttgaagttatgactggtgctgaattaaatagttttattttct 51854541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 241
Target Start/End: Original strand, 14845743 - 14845932
Alignment:
Q  50 ttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttg-ttggtcgacttattgttgtttaggcttaatgccaagatgttattggagac 148  Q
    |||||||||||||||||| ||||||| |||||||||||||| || |||  ||||   ||||||||||||||||||||||||||||| |||| |||||||     
T  14845743 ttttccttttcatgtatcaaattttggaacttgttgatgtgcccttttcattggctaacttattgttgtttaggcttaatgccaagttgttgttggaga- 14845841  T
Q  149 ttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||| | | ||||||||||||||||||  ||||| ||||| |||||||||||||||| |||||| |||||||||| ||||||| ||||||||||    
T  14845842 ttaaaacattgttgttgttattgaaac-gcaaa-ctttctgctgcatgattttgaaattatgactgatgttgaactaaatagctttattttct 14845932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 241
Target Start/End: Original strand, 9772538 - 9772661
Alignment:
Q  118 ttaggcttaatgccaagatgttatt-ggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgat 216  Q
    |||||||| |||||||| ||||||| ||||| ||  ||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| |||    
T  9772538 ttaggctttatgccaagttgttatttggagaatttaaccgttgttgttgttatttgaaatgcaaa-ctttccgctgcatgattttgaagttatgaaagat 9772636  T
Q  217 gttgaattaaatagttttattttct 241  Q
    ||||||||||||||||| |||||||    
T  9772637 gttgaattaaatagtttcattttct 9772661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 241
Target Start/End: Original strand, 48775178 - 48775382
Alignment:
Q  39 tattattgttgtt-ttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatg 137  Q
    ||||||||||||| ||||||   ||||||| | ||||| || ||| ||||||||||| | |||| | || ||||||||| |||||||| ||||||||||     
T  48775178 tattattgttgttgttccttcctatgtatcaatttttggaatttgatgatgtggcccct-gttgattgatttattgttggttaggctttatgccaagata 48775276  T
Q  138 ttatt--ggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatga-ttttgaagttatgaatgatgttgaattaaatagtttt 234  Q
    |||||  ||||| ||  ||||||||||| ||||||  ||||||||| ||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  48775277 ttattttggagaatttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataaattttgaagttacgaatgatgttgaattaaatagtttt 48775375  T
Q  235 attttct 241  Q
    | |||||    
T  48775376 actttct 48775382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 21452384 - 21452472
Alignment:
Q  36 ttatattattgttgtttt-ccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggc 123  Q
    |||||||||||||||||| ||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  21452384 ttatattattgttgtttttcctttccatgtatcaaattttggaacttgttgctgtggccctttgttggtcgacttattgttgtttaggc 21452472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 21457558 - 21457646
Alignment:
Q  36 ttatattattgttgtttt-ccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggc 123  Q
    |||||||||||||||||| ||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  21457558 ttatattattgttgtttttcctttccatgtatcaaattttggaacttgttgctgtggccctttgttggtcgacttattgttgtttaggc 21457646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 113 - 241
Target Start/End: Original strand, 16332209 - 16332339
Alignment:
Q  113 gttgtttaggcttaatgccaagatgttatt--ggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttat 209  Q
    |||||||||||||||||||||||| |||||  ||||| ||  || |||||||||||||||  ||| ||||| | ||||||||||| ||||| ||||||||    
T  16332209 gttgtttaggcttaatgccaagatattattatggagaatttaactgttgttgttgttatttgaaacgcaaa-cattccgctgcatcatttttgaagttat 16332307  T
Q  210 gaatgatgttgaattaaatagttttattttct 241  Q
    ||| ||||||||||||||||||||||||||||    
T  16332308 gaaagatgttgaattaaatagttttattttct 16332339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 16832843 - 16832758
Alignment:
Q  61 atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttattggag 146  Q
    ||||||| ||||||| |||||| ||||||| |||||||||||| || || |||||||||||||||||||||||||| |||||||||    
T  16832843 atgtatcaaattttggaacttgatgatgtgaccctttgttggttgattttttgttgtttaggcttaatgccaagatattattggag 16832758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 241
Target Start/End: Original strand, 50656601 - 50656799
Alignment:
Q  41 ttattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgtta 140  Q
    ||||||||||||||||  | ||||||| | ||||| |||||| ||||||||||||||| |||| ||  |||||||||| |||| | |||||||||| |||    
T  50656601 ttattgttgttttcctcct-atgtatcaatttttggaacttgatgatgtggccctttgatggttga--tattgttgtt-aggcgttatgccaagatatta 50656696  T
Q  141 tt-ggagacttaca-ccgttgttgttgttattgaaaatgcaaaactttccgctgcatgat-tttgaagttatgaatgatgttgaattaaatagttttatt 237  Q
    || ||||| ||  | |||||||||| ||| ||  | ||||||| ||||||||||||| || ||||||||||| ||  |||||||||||||||| ||||||    
T  50656697 tttggagaattttaaccgttgttgtggttgtttgagatgcaaa-ctttccgctgcataatctttgaagttattaaacatgttgaattaaatagctttatt 50656795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 9692070 - 9692147
Alignment:
Q  156 gttgttgttgttattgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||||||| |||| ||||||||||  || ||||||||| ||| |||||||||||||| ||||| |||||||||||||    
T  9692070 gttgttgttgctatttaaaatgcaaatatt-ccgctgcataattattgaagttatgaattatgtttaattaaatagttt 9692147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 15374186 - 15374109
Alignment:
Q  156 gttgttgttgttattgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||||||| |||| ||||||||||  || ||||||||| | | |||||||||||||||||||| |||||||||||||    
T  15374186 gttgttgttgctatttaaaatgcaaatatt-ccgctgcataactattgaagttatgaatgatgtttaattaaatagttt 15374109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 2499614 - 2499666
Alignment:
Q  38 atattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtgg 91  Q
    ||||||||||||||| | ||| |||||||||||||||| |||||||||| ||||    
T  2499614 atattattgttgttt-cttttccatgtatcgaattttggaacttgttgaagtgg 2499666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 5e-86; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 25 - 241
Target Start/End: Original strand, 20890586 - 20890800
Alignment:
Q  25 gaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggct 124  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  20890586 gaattattatattatattattgttgttttcctttccatgtatcaaattttggaatttgttgatgtggccctttgttggtcgacttattgttgtttaggct 20890685  T
Q  125 taatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaatt 224  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||| ||  ||||||||||    
T  20890686 taatgccaagatgttgttggagacttaaaccgttgttgttgttattg-aaatgc-aaactttccgctgcaagattttgaagttattaaacatgttgaatt 20890783  T
Q  225 aaatagttttattttct 241  Q
    |||||||||||||||||    
T  20890784 aaatagttttattttct 20890800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 3697255 - 3697035
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||||||||||||||| ||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  3697255 ggatgggaattattatattatattattgttattttcctttccatgtatcaaattttggaacttgttgatgtggccatttgttggtcgacttattgttgtt 3697156  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||| ||  ||||    
T  3697155 taggcttaatgccaagatgttgttggagacttaaaccgttgttgttgttattg-aaatgc-aaactttccgctgcaagattttgaagttattaaacatgt 3697058  T
Q  219 tgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||    
T  3697057 tgaattaaatagttttattttct 3697035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 4979949 - 4979728
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggcccttt-gttggtcgacttattgttgt 117  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  4979949 ggatgggaattattatattatattattgttgttttcctttccatgtatcaaattttggaacttgttgatgtggcccttttgttggtcgacttattgttgt 4979850  T
Q  118 ttaggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatg 217  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||| |||||    
T  4979849 ttaggcttaatgccaagatattgttggagacttaaaccgttgttgttgttattg-aaatgcaaaa-tttccgctgcatgattttaaagttatgactgatg 4979752  T
Q  218 ttgaattaaatagttttattttct 241  Q
     |||||||||||| ||||||||||    
T  4979751 atgaattaaatagctttattttct 4979728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 31 - 241
Target Start/End: Complemental strand, 851121 - 850914
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | ||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  851121 ttatattattttattgttgttttcctcct-atgtatcaaattttgaaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 851024  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatag 230  Q
    |||||| || ||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  851023 caagatattgttggagatttacatcgttgtggttgttattgaaa-tgcaaaactttccgctgcattatttcgaagttatgactgatgttgaattaaatag 850925  T
Q  231 ttttattttct 241  Q
    |||||||||||    
T  850924 ttttattttct 850914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 6587752 - 6587529
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||||||||||||||||||||||||   ||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||| |    
T  6587752 ggatgagaattattatattatattattgttgttttccttcctatgtatcaatttttggaacttgttgatgtggccctttgttggttgacttattgttgat 6587653  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgt---tgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatga 215  Q
    ||||||||||||||||||||| ||||||| ||  |||||||||||   |||||||| |||||| |||||||||||||||||||||||||||||| ||  |    
T  6587652 taggcttaatgccaagatgttgttggagaatttaaccgttgttgttgttgttattg-aaatgc-aaactttccgctgcatgattttgaagttattaaaca 6587555  T
Q  216 tgttgaattaaatagttttattttct 241  Q
    |||||||||||| |||||||||||||    
T  6587554 tgttgaattaaagagttttattttct 6587529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 31 - 241
Target Start/End: Original strand, 238650 - 238857
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | ||||||| ||||||| |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  238650 ttatattattttattgttgttttcctcct-atgtatcaaattttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 238747  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatag 230  Q
    || ||| || ||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| ||||  ||||||||| ||||||||||||||||||    
T  238748 caggatattgttggagatttacatcgttgtggttgttattgaaa-tgcaaaactttccgctgcattatttcaaagttatgactgatgttgaattaaatag 238846  T
Q  231 ttttattttct 241  Q
    |||||||||||    
T  238847 ttttattttct 238857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 32 - 241
Target Start/End: Complemental strand, 33828942 - 33828736
Alignment:
Q  32 tatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgcc 131  Q
    |||||||| ||||||||||||||||  | ||||||| | ||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  33828942 tatattattttattgttgttttcctcct-atgtatcaatttttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgcc 33828845  T
Q  132 aagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagt 231  Q
    | ||| || ||||||| ||| | |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  33828844 aggatattgttggagatttaaatcgttgtggttgttattgaaa-tgcaaaactttccgctgcattattttgaagttatgactgatgttgaattaaatagt 33828746  T
Q  232 tttattttct 241  Q
    ||||||||||    
T  33828745 tttattttct 33828736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 31 - 241
Target Start/End: Original strand, 13362477 - 13362685
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | ||||||| | ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  13362477 ttatattattttattgttgttttcctcct-atgtatcaatttttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 13362574  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaata 229  Q
    || ||| || ||||||| ||| | |||||| ||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  13362575 caggatattgttggagatttaaatcgttgtggttgttattgaaa-tgcaaaactttccgctgcataattattgaagttatgaatgatgttgaattaaata 13362673  T
Q  230 gttttattttct 241  Q
    ||||||||||||    
T  13362674 gttttattttct 13362685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 31 - 241
Target Start/End: Complemental strand, 213604 - 213397
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | ||||||| ||||||| |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  213604 ttatattattttattgttgttttcctcct-atgtatcaaattttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 213507  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatag 230  Q
    || ||| || ||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| ||||  || |||||| ||||||||||||||||||    
T  213506 caggatattgttggagatttacatcgttgtggttgttattgaaa-tgcaaaactttccgctgcattatttcaaatttatgactgatgttgaattaaatag 213408  T
Q  231 ttttattttct 241  Q
    |||||||||||    
T  213407 ttttattttct 213397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 31 - 241
Target Start/End: Complemental strand, 727227 - 727020
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | ||||||| ||||||| |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  727227 ttatattattttattgttgttttcctcct-atgtatcaaattttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 727130  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatag 230  Q
    || ||| || ||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| ||||  || |||||| ||||||||||||||||||    
T  727129 caggatattgttggagatttacatcgttgtggttgttattgaaa-tgcaaaactttccgctgcattatttcaaatttatgactgatgttgaattaaatag 727031  T
Q  231 ttttattttct 241  Q
    |||||||||||    
T  727030 ttttattttct 727020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 31 - 241
Target Start/End: Complemental strand, 799728 - 799521
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | ||||||| ||||||| |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  799728 ttatattattttattgttgttttcctcct-atgtatcaaattttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 799631  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatag 230  Q
    || ||| || ||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| ||||  || |||||| ||||||||||||||||||    
T  799630 caggatattgttggagatttacatcgttgtggttgttattgaaa-tgcaaaactttccgctgcattatttcaaatttatgactgatgttgaattaaatag 799532  T
Q  231 ttttattttct 241  Q
    |||||||||||    
T  799531 ttttattttct 799521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 31 - 241
Target Start/End: Complemental strand, 1050249 - 1050042
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | || |||| | ||||| |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  1050249 ttatattattttattgttgttttcctcct-atttatcaatttttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 1050152  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatag 230  Q
    || ||| || ||||||| ||||| |||||| ||| ||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  1050151 caggatattgttggagatttacatcgttgtggttattattgaaa-tgcaaaactttccgctgcattattttgaagttatgactgatgttgaattaaatag 1050053  T
Q  231 ttttattttct 241  Q
    |||||||||||    
T  1050052 ttttattttct 1050042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 27345342 - 27345122
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| ||||||||||||||| | |||||||||||||||   ||||||| | ||||| ||||||||||||||||||||||||||| ||| |||||||| |    
T  27345342 ggatgggaattattatattatgtgattgttgttttccttcctatgtatcaatttttggaacttgttgatgtggccctttgttggttgacctattgttgat 27345243  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||||||||||||||||||| ||||||| ||  ||||||||||||||||||| |||||| ||| |||||| ||||||||||||||||| | ||  ||||    
T  27345242 taggcttaatgccaagatgttgttggagaatttaaccgttgttgttgttattg-aaatgc-aaattttccgttgcatgattttgaagttgttaaacatgt 27345145  T
Q  219 tgaattaaatagttttattttct 241  Q
    | |||||||||||||||||||||    
T  27345144 taaattaaatagttttattttct 27345122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 64 - 241
Target Start/End: Original strand, 752420 - 752595
Alignment:
Q  64 tatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttattggagacttacaccgttgttgt 163  Q
    |||| ||||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| || ||||||| ||||| |||||| ||    
T  752420 tatcaaattttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgccaagatattgttggagatttacatcgttgtggt 752518  T
Q  164 tgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||| |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||    
T  752519 tgttattgaaa-tgcaaaactttccgctgcattatttcgaagttatgactgatgttgaattaaatagttttattttct 752595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 32 - 241
Target Start/End: Original strand, 36800962 - 36801168
Alignment:
Q  32 tatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgcc 131  Q
    |||||||| ||||||||||||||||  | ||||||| | ||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  36800962 tatattattttattgttgttttcctcct-atgtatcaatttttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgcc 36801059  T
Q  132 aagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagt 231  Q
    | ||| || ||||||| ||| | |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  36801060 aggatattgttggagatttaaatcgttgtggttgttattgaaa-tgcaaaactttccgctgcattattttgaagttatgactgatgttgaatttaatagt 36801158  T
Q  232 tttattttct 241  Q
    ||||||||||    
T  36801159 tttattttct 36801168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 31 - 241
Target Start/End: Complemental strand, 14563217 - 14563011
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||| ||||||  | ||||||| ||||||| |||||| |||||||||||||||||||| ||||| |||||||||||||| |||||    
T  14563217 ttatattattttattgttgctttcctcct-atgtatcaaattttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggct-aatgc 14563121  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatag 230  Q
    || ||| || ||||||| ||||  |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  14563120 caggatattgttggagatttacgtcgttgtggttgttattgaaa-tgcaaaactttccgctgcattattttgaagttatgactgatgttgaattaaatag 14563022  T
Q  231 ttttattttct 241  Q
    |||||||||||    
T  14563021 ttttattttct 14563011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 32 - 241
Target Start/End: Complemental strand, 35033451 - 35033245
Alignment:
Q  32 tatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgcc 131  Q
    |||||||| ||||||||||||||||  | ||||||| | ||||| |||||| |||| ||||||||||||||| ||||| |||||||||||||||||||||    
T  35033451 tatattattttattgttgttttcctcct-atgtatcaatttttggaacttgatgatatggccctttgttggttgactt-ttgttgtttaggcttaatgcc 35033354  T
Q  132 aagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagt 231  Q
    | ||| || ||||||| ||| | |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  35033353 aggatattgttggagatttaaatcgttgtggttgttattgaaa-tgcaaaactttccgctgcattattttgaagttatgactgatgttgaatttaatagt 35033255  T
Q  232 tttattttct 241  Q
    ||||||||||    
T  35033254 tttattttct 35033245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 34 - 241
Target Start/End: Complemental strand, 37879447 - 37879242
Alignment:
Q  34 tattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaa 133  Q
    |||||| | ||||||||||||| || |||||||  ||||||| |||||||||||||| || ||  ||||   |||| |||||||||||||||||||||||    
T  37879447 tattatttcattgttgttttcccttccatgtatgaaattttggaacttgttgatgtgccctttcattggctaactt-ttgttgtttaggcttaatgccaa 37879349  T
Q  134 gatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||| ||||||| ||| |   ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| || ||||||||||||||| ||    
T  37879348 gatgttgttggaga-ttaaaatattgttgttgctattgaaaatgcaaaactttccgctgcattaatttgaagttatgactgttgttgaattaaataggtt 37879250  T
Q  234 tattttct 241  Q
    ||||||||    
T  37879249 tattttct 37879242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 23116839 - 23116616
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||||||| |||||||||||||||||| | || | ||||||| | ||||| |||||| |||||||||||||||||||| || |||||||||     
T  23116839 ggatgggaattattat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggccctttgttggttgatttattgttg- 23116742  T
Q  118 ttaggcttaatgccaagatgttat-tggag-acttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatga-ttttgaagttatgaatg 214  Q
    |||||||| |||||||||| |||| ||||| ||||  ||||||||||| ||||||  |||||| |||||||||||||||||| ||||||||||||| | |    
T  23116741 ttaggctttatgccaagatattatatggagaactttaaccgttgttgtggttatttgaaatgc-aaactttccgctgcatgatttttgaagttatggacg 23116643  T
Q  215 atgttgaattaaatagttttattttct 241  Q
    ||||||| |||||||||||||||||||    
T  23116642 atgttgagttaaatagttttattttct 23116616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 34 - 241
Target Start/End: Complemental strand, 28980300 - 28980097
Alignment:
Q  34 tattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaa 133  Q
    |||||| | |||||||||| ||||  |||||||| ||||||| |||||||||||||| || ||  ||||   |||| |||||||||||||||||||||||    
T  28980300 tattatttcattgttgtttcccttc-catgtatcaaattttggaacttgttgatgtgccctttcattggctaactt-ttgttgtttaggcttaatgccaa 28980203  T
Q  134 gatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||| ||||||| ||| | | ||||||||| ||||||||||||||||||||||||||||| |  |||||||||||| || ||||||||||||||||||    
T  28980202 gatgttgttggaga-ttaaaacattgttgttgctattgaaaatgcaaaactttccgctgcatta-attgaagttatgactgttgttgaattaaatagttt 28980105  T
Q  234 tattttct 241  Q
    ||||||||    
T  28980104 tattttct 28980097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 34 - 241
Target Start/End: Complemental strand, 28985520 - 28985317
Alignment:
Q  34 tattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaa 133  Q
    |||||| | |||||||||| ||||  |||||||| ||||||| |||||||||||||| || ||  ||||   |||| |||||||||||||||||||||||    
T  28985520 tattatttcattgttgtttcccttc-catgtatcaaattttggaacttgttgatgtgccctttcattggctaactt-ttgttgtttaggcttaatgccaa 28985423  T
Q  134 gatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||| ||||||| ||| | | ||||||||| ||||||||||||||||||||||||||||| |  |||||||||||| || ||||||||||||||||||    
T  28985422 gatgttgttggaga-ttaaaacattgttgttgctattgaaaatgcaaaactttccgctgcatta-attgaagttatgactgttgttgaattaaatagttt 28985325  T
Q  234 tattttct 241  Q
    ||||||||    
T  28985324 tattttct 28985317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 7004598 - 7004816
Alignment:
Q  19 ggatgtgaattattatattatatt-attgttgtttt-ccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttg 116  Q
    |||||||||||||||| | ||||| ||||||||||| ||||  |||||||| ||||||| ||||||||||| |||||||| || ||| ||||||||| ||    
T  7004598 ggatgtgaattattatct-atatttattgttgtttttccttcccatgtatcaaattttggaacttgttgatatggccctt-gtcggttgacttattgatg 7004695  T
Q  117 tttaggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatga-ttttgaagttatgaatga 215  Q
     |||||||||||| ||||||||| ||||||||||| || |||| |||  |||||  |||||| |||||||||||||||| | ||||||  ||||||||||    
T  7004696 attaggcttaatgtcaagatgttgttggagacttaaactgttgatgt--ttatt--aaatgc-aaactttccgctgcataatttttgagattatgaatga 7004790  T
Q  216 tgttgaattaaatagttttattttct 241  Q
    ||| || |||||||||||||||||||    
T  7004791 tgtcgatttaaatagttttattttct 7004816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 241
Target Start/End: Original strand, 14747082 - 14747222
Alignment:
Q  96 ttgttggtcgacttattgttgtttaggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcat 195  Q
    |||||||| ||||||||| || ||||||||||| |||||||||| ||||||||||| ||||||||||||  ||||  ||||||||| |||||||||||||    
T  14747082 ttgttggttgacttattgatgattaggcttaat-ccaagatgttgttggagacttaaaccgttgttgtt--tatt--aaatgcaaa-ctttccgctgcat 14747175  T
Q  196 gatttt-gaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    |||||| ||||||||||| |||||||| |||||||||||||||||||    
T  14747176 gatttttgaagttatgaacgatgttgagttaaatagttttattttct 14747222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 40144793 - 40145014
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||| ||| |||||||||||||||||| | || | |||| || | ||||| |||||| |||||||||||||||||||| ||  |||||||||    
T  40144793 ggatgggaattactat-ttatattattgttgtttttccttcctatgtttcaatttttggaacttgatgatgtggccctttgttggttga--tattgttgt 40144889  T
Q  118 ttaggcttaatgccaagatgttatt-ggag-acttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatg 214  Q
    | |||||| |||||||||| ||||| |||| | ||  ||||||||||| ||||||  ||||||||| ||||||||||||| ||||| || ||||||||||    
T  40144890 t-aggctttatgccaagatattatttggaggattttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataatttttgaggttatgaatg 40144987  T
Q  215 atgttgaattaaatagttttattttct 241  Q
    |||| || |||||||||||||||||||    
T  40144988 atgtcgatttaaatagttttattttct 40145014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 792113 - 792212
Alignment:
Q  141 ttggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttattttc 240  Q
    ||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| ||||  ||||||||| ||||||||||||||||||||||||||||    
T  792113 ttggagatttacatcgttgtggttgttattgaaa-tgcaaaactttccgctgcattatttcaaagttatgactgatgttgaattaaatagttttattttc 792211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 25702059 - 25702271
Alignment:
Q  19 ggatgtgaattattatattatattattgttg-ttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||||||||| || ||||||||| ||||||||   ||||||| | ||||| |||||| | ||||||||||||||||||           |||    
T  25702059 ggatgggaattattatat-attttattgttgattttccttcctatgtatcaatttttggaacttgataatgtggccctttgttggt-----------tgt 25702146  T
Q  118 ttaggcttaatgccaagatgttattg--gagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatga 215  Q
    ||||||||||||||||||| || ||   |||| ||  ||||||||||||||||||  |||||| || | ||||||||||||||||| |||||||||| ||    
T  25702147 ttaggcttaatgccaagatattgtttttgagaatttaaccgttgttgttgttatttgaaatgcgaa-cattccgctgcatgattttaaagttatgaaaga 25702245  T
Q  216 tgttgaattaaatagttttattttct 241  Q
    ||||||||||||||||||||||||||    
T  25702246 tgttgaattaaatagttttattttct 25702271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 16267377 - 16267597
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||| ||| |||||||||||||||||| | || | ||||||| | ||||| |||||| ||||||||||||| | |||| ||  |||||||||    
T  16267377 ggatgggaattactat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggccctt-gatggttga--tattgttgt 16267472  T
Q  118 ttaggcttaatgccaagatgttatt-ggagacttaca-ccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatg 214  Q
    | |||||| ||||| |||| ||||| ||||| ||  | |||||||||| ||||||  ||||||||| ||||||||||||| ||||| |||||||||||||    
T  16267473 t-aggctttatgcccagatattatttggagaattttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataatttttgaagttatgaatg 16267570  T
Q  215 atgttgaattaaatagttttattttct 241  Q
    |||| ||||||||||||||||||||||    
T  16267571 atgtcgaattaaatagttttattttct 16267597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 16259223 - 16259003
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||| ||| |||||||||||||||||| | || | ||||||| | ||||| |||||| ||||||||||||| | |||| ||  |||||||||    
T  16259223 ggatgggaattactat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggccctt-gatggttga--tattgttgt 16259128  T
Q  118 ttaggcttaatgccaagatgttatt-ggagacttaca-ccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatg 214  Q
    | |||||| ||||| |||| ||||| ||||| ||  | |||||||||| ||||||  ||||||||| ||||| ||||||| ||||| |||||||||||||    
T  16259127 t-aggctttatgcccagatattatttggagaattttaaccgttgttgtggttatttgaaatgcaaa-ctttctgctgcataatttttgaagttatgaatg 16259030  T
Q  215 atgttgaattaaatagttttattttct 241  Q
    |||| ||||||||||||||||||||||    
T  16259029 atgtcgaattaaatagttttattttct 16259003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 14417200 - 14417285
Alignment:
Q  156 gttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    |||||||||| |||| ||||||||||  || ||| ||||| ||||| ||||||||||| |||||||||||||||||||| |||||||    
T  14417200 gttgttgttgctatttaaaatgcaaatatt-ccgttgcataatttttgaagttatgaaagatgttgaattaaatagtttcattttct 14417285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 35540657 - 35540613
Alignment:
Q  39 tattattgttgttttccttttcatgtatcgaattttgaaacttgt 83  Q
    ||||||||||| |||||||| |||||||| ||||||| |||||||    
T  35540657 tattattgttgctttcctttccatgtatcaaattttggaacttgt 35540613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 158; Significance: 3e-84; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 41 - 241
Target Start/End: Original strand, 7237891 - 7238090
Alignment:
Q  41 ttattgttg-ttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgtt 139  Q
    ||||||||| ||||||||| |||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7237891 ttattgttgcttttcctttccatgtatcaaattttggaacttgttgatgtggcc-tttgttggtcgacttattgttgtttaggcttaatgccaagatgtt 7237989  T
Q  140 attggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttatttt 239  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7237990 attggagacttaaaccgttgtagttgttattg-aaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttatttt 7238088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 32 - 241
Target Start/End: Original strand, 21896834 - 21897040
Alignment:
Q  32 tatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgcc 131  Q
    |||||||| ||||||||||||||||  | ||||||| | ||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  21896834 tatattattttattgttgttttcctcct-atgtatcaatttttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgcc 21896931  T
Q  132 aagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagt 231  Q
    | ||| || ||||||| ||| | |||||| | ||||||||||| |||||||||||||||||||| || |||||||||||| |||||||||||||||||||    
T  21896932 aggatattgttggagatttaaatcgttgtgggtgttattgaaa-tgcaaaactttccgctgcattatcttgaagttatgactgatgttgaattaaatagt 21897030  T
Q  232 tttattttct 241  Q
    ||||||||||    
T  21897031 tttattttct 21897040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 34 - 241
Target Start/End: Complemental strand, 11583209 - 11583004
Alignment:
Q  34 tattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaa 133  Q
    |||||| | ||||||||||||| || |||||||| ||||||| |||||||||||||| || ||  ||||   |||| |||||||||||||||||||||||    
T  11583209 tattatttcattgttgttttcccttccatgtatcaaattttggaacttgttgatgtgccctttcattggctaactt-ttgttgtttaggcttaatgccaa 11583111  T
Q  134 gatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||| ||||||| ||| |   ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| || ||||||||||||||||||    
T  11583110 gatgttgttggaga-ttaaaatattgttgttgctattgaaaatgcaaaactttccgctgcattaatttgaagttatgactgttgttgaattaaatagttt 11583012  T
Q  234 tattttct 241  Q
    ||||||||    
T  11583011 tattttct 11583004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 31 - 241
Target Start/End: Original strand, 15332661 - 15332869
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | ||||||| | ||||| |||||   ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  15332661 ttatattattttattgttgttttcctcct-atgtatcaatttttggaacttaacgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 15332758  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaata 229  Q
    || ||| || ||||||  ||| |  ||||| ||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  15332759 caggatattgttggaggtttaaattgttgtggttgttattgaaa-tgcaaaactttccgctgcataattattgaagttatgaatgatgttgaattaaata 15332857  T
Q  230 gttttattttct 241  Q
    ||||||||||||    
T  15332858 gttttattttct 15332869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 31 - 241
Target Start/End: Complemental strand, 17309284 - 17309076
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | ||||||| | ||||| |||||   ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  17309284 ttatattattttattgttgttttcctcct-atgtatcaatttttggaacttaacgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 17309187  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaata 229  Q
    || ||| || ||||||| ||| |  || || ||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  17309186 caggatattgttggagatttaaattgtcgtggttgttattgaaa-tgcaaaactttccgctgcataattattgaagttatgaatgatgttgaattaaata 17309088  T
Q  230 gttttattttct 241  Q
    ||||||||||||    
T  17309087 gttttattttct 17309076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 39 - 241
Target Start/End: Original strand, 8070237 - 8070437
Alignment:
Q  39 tattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgt 138  Q
    |||||||||||||||||||   ||||||| | ||||| |||||||||||||||||||||| |||| ||||||||| || |||||||||||||||||||||    
T  8070237 tattattgttgttttccttcctatgtatcaatttttggaacttgttgatgtggccctttgctggttgacttattgatgattaggcttaatgccaagatgt 8070336  T
Q  139 tattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttattt 238  Q
    |  |||||| ||| || ||||  |||||||||| |||||| |||||||||||||||||||||||||||| | |   ||||||||||||||||||||||||    
T  8070337 tgatggagaattaaactgttgacgttgttattg-aaatgc-aaactttccgctgcatgattttgaagttgttagacatgttgaattaaatagttttattt 8070434  T
Q  239 tct 241  Q
    |||    
T  8070435 tct 8070437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 34 - 241
Target Start/End: Original strand, 34134483 - 34134688
Alignment:
Q  34 tattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaa 133  Q
    |||||| | ||||||||||||| || |||||||| ||||||| |||||||||||||| || ||  ||||   |||| |||||||||||||||||||||||    
T  34134483 tattatttcattgttgttttcccttccatgtatcaaattttggaacttgttgatgtgccctttcattggctaactt-ttgttgtttaggcttaatgccaa 34134581  T
Q  134 gatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||| ||||||| ||| |   ||||||||| ||||| ||||||||||||||||||||||| | ||||||||||||| || ||||||||||||||||||    
T  34134582 gatgttgttggaga-ttaaaatattgttgttgctattgcaaatgcaaaactttccgctgcattaatttgaagttatgactgttgttgaattaaatagttt 34134680  T
Q  234 tattttct 241  Q
    ||||||||    
T  34134681 tattttct 34134688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 241
Target Start/End: Complemental strand, 27766976 - 27766771
Alignment:
Q  39 tattattgttgt-tttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatg 137  Q
    |||||||||||| |||||||   || |||| | ||||| |||||| |||||||||||||||||||| || |  ||||||||||||||||||||||||||     
T  27766976 tattattgttgtctttccttcctatatatcaatttttggaacttgatgatgtggccctttgttggttgattagttgttgtttaggcttaatgccaagata 27766877  T
Q  138 ttatt--ggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatgatgttgaattaaatagtttt 234  Q
    || ||  | ||| ||  |||||||||||||| |||  ||||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  27766876 ttgttttgcagaatttaaccgttgttgttgtcatttgaaatgcaaa-cattccgctgcatgatttttgaagttatgaaagatgttgaattaaatagtttt 27766778  T
Q  235 attttct 241  Q
    |||||||    
T  27766777 attttct 27766771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 19097223 - 19097446
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||||||| |||||||||||||||||| | || | ||||||| | ||||| |||||| ||||||| |||||||||||| || |||||||||     
T  19097223 ggatgagaattattat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtgaccctttgttggttgatttattgttg- 19097320  T
Q  118 ttaggcttaatgccaagatgttat-tggag-acttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatga-ttttgaagttatgaatg 214  Q
    |||| ||| |||||||||| |||| ||||| | ||  ||||||||||| ||||||  |||||| |||||||||||||||||| |||| |||||||| | |    
T  19097321 ttagactttatgccaagatattatatggagaattttaaccgttgttgtggttatttgaaatgc-aaactttccgctgcatgatttttaaagttatggacg 19097419  T
Q  215 atgttgaattaaatagttttattttct 241  Q
    ||||||| |||||||||||||||||||    
T  19097420 atgttgagttaaatagttttattttct 19097446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 241
Target Start/End: Original strand, 95059 - 95236
Alignment:
Q  61 atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttatt-ggagacttacaccgttg 159  Q
    |||||||  |||||| ||||||||| | ||||||| || |||| ||   ||||||||| ||| || ||||||||||||| || ||||| ||  ||| |||    
T  95059 atgtatcctattttggaacttgttgttatggccctatgatggttgaa--attgttgtt-aggttttatgccaagatgttgtttggagaatttaacctttg 95155  T
Q  160 ttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    |||||||||||  |||| ||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  95156 ttgttgttatttgaaatacaaat-tttccgctgcatgattttgaagttatgaaagatgttgaattaaatagttttattttct 95236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 24412010 - 24412115
Alignment:
Q  39 tattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatg 137  Q
    ||||||||||||||| | || | ||||||| | ||||| |||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||     
T  24412010 tattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggccctttgttggttgatttattgttgtttaggcttaatgccaagata 24412109  T
Q  138 ttattg 143  Q
    ||||||    
T  24412110 ttattg 24412115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 241
Target Start/End: Complemental strand, 22406168 - 22405973
Alignment:
Q  44 ttgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttattg 143  Q
    |||||||||||||  | ||||||| ||||||| |||||| ||||||||||||||| |||| ||  | |||||||| |||||| || ||||||| |||||     
T  22406168 ttgttgttttcctcct-atgtatc-aattttggaacttgatgatgtggccctttgatggttga--tgttgttgtt-aggctttattccaagatattattt 22406074  T
Q  144 gag--acttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt--gaagttatgaatgatgttgaattaaatagttttatttt 239  Q
    ||   | ||  ||||||||||| |||||| ||||||||||  |||||||||||| |||||  |||||||| ||  |||||||||||||||||||||||||    
T  22406073 gaagaattttaaccgttgttgtggttatttaaaatgcaaat-tttccgctgcataatttttggaagttattaaacatgttgaattaaatagttttatttt 22405975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 29158614 - 29158528
Alignment:
Q  155 cgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaag-ttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||| ||||||  ||||||||| ||||||||||||||||||| ||| ||||| | |||||||| |||||||||||||||||||    
T  29158614 cgttgttgtggttatttgaaatgcaaa-ctttccgctgcatgatttttaaggttatggacgatgttgagttaaatagttttattttct 29158528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 10464879 - 10464936
Alignment:
Q  185 ttccgctgcatgatttt-gaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  10464879 ttccgctgcataatttttgaagttatgaaagatgttgaattaaatagttttattttct 10464936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 10471401 - 10471458
Alignment:
Q  185 ttccgctgcatgatttt-gaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  10471401 ttccgctgcataatttttgaagttatgaaagatgttgaattaaatagttttattttct 10471458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 15299060 - 15299019
Alignment:
Q  200 ttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15299060 ttgaagttatgaatgatgttgaattaaatagttttattttct 15299019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 24362224 - 24362170
Alignment:
Q  36 ttatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtgg 91  Q
    ||||||||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  24362224 ttatattattgttgttt-ctttttcatgtatcgaattttggaacttgttgatgtgg 24362170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 24368799 - 24368745
Alignment:
Q  36 ttatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtgg 91  Q
    ||||||||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  24368799 ttatattattgttgttt-ctttttcatgtatcgaattttggaacttgttgatgtgg 24368745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 4106325 - 4106270
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttg 75  Q
    ||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  4106325 ggatgggaattattat-ttatattattgttgttttcctttccatgtatcaaattttg 4106270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 17208420 - 17208478
Alignment:
Q  185 ttccgctgcatgatt-ttgaagtt-atgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||| ||| |||||||| ||||| |||||| |||||||||||||||||||||    
T  17208420 ttccgctgcataattattgaagtttatgaaagatgttaaattaaatagttttattttct 17208478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 29158697 - 29158621
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccct 95  Q
    ||||| |||||||||| |||||||||||||||||| | || | ||||||| | ||||| |||||| ||||||||||||    
T  29158697 ggatgggaattattat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggccct 29158621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 147; Significance: 1e-77; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 519484 - 519703
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||||||||| ||||    
T  519484 ggatgggaattattatattatattattgttgttttcctttccatgtatcaaattttggaacttgttgatgtggccc-ttgttggttgacttattgatgtt 519582  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||  || |    
T  519583 taggcttaatgccaagatgatgttggagacttaaaccgttgttgttgttattg-aaatgc-aaactttccgctgcatgattttgaagttattaaacatat 519680  T
Q  219 tgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||    
T  519681 tgaattaaatagttttattttct 519703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 513067 - 513286
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||||||||| ||||    
T  513067 ggatgggaattattatattatattattgttgttttcctttccatgtatcaaattttggaacttgttgatgtggccc-ttgttggttgacttattgatgtt 513165  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||||||||||||||||| | ||||||||||| ||||||| ||||||||||| |||| | |||||||||||||||||||||||||||||| ||  || |    
T  513166 taggcttaatgccaagatgatgttggagacttaaaccgttgctgttgttattg-aaatac-aaactttccgctgcatgattttgaagttattaaacatat 513263  T
Q  219 tgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||    
T  513264 tgaattaaatagttttattttct 513286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 5e-71; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 20292301 - 20292081
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||||||| ||||||||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||| |||||||||||| |    
T  20292301 ggatgggaattattatattatagtattgttgttttcctttccatgtatcaaattttggaacttgttgatgtggccc-ttgttggttgacttattgttgat 20292203  T
Q  119 taggcttaatgccaagatgttattggagacttacaccg-ttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatg 217  Q
    |||||||||||||||||||| |||||||||||| || | ||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||  |||    
T  20292202 taggcttaatgccaagatgtcattggagacttaaacagtttgttgttgttattg-aaatgc-aaactttccgctgcatgattttgaagttattaaacatg 20292105  T
Q  218 ttgaattaaatagttttattttct 241  Q
    ||||||| ||||||||||||||||    
T  20292104 ttgaattgaatagttttattttct 20292081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 52990348 - 52990128
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||||||||||||||||||||||||   ||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||| |    
T  52990348 ggatgggaattattatattatattattgttgttttccttcctatgtatcaatttttggaacttgttgatgtggccctttgttggttgacttattgttgat 52990249  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||||||||||||||||||| ||||||| ||  ||||| |||||| |||||| |||||| |||||||| ||||||||||||||||||||| ||  ||||    
T  52990248 taggcttaatgccaagatgttgttggagaatttaaccgtagttgttattattg-aaatgc-aaactttcagctgcatgattttgaagttattaaacatgt 52990151  T
Q  219 tgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||    
T  52990150 tgaattaaatagttttattttct 52990128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 25 - 241
Target Start/End: Complemental strand, 20298973 - 20298759
Alignment:
Q  25 gaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggct 124  Q
    |||||||||||||||| ||||||||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||| |||||||||||| |||||||    
T  20298973 gaattattatattatagtattgttgttttcctttccatgtatcaaattttggaacttgttgatgtggccc-ttgttggttgacttattgttgattaggct 20298875  T
Q  125 taatgccaagatgttattggagacttacaccg-ttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaat 223  Q
    ||||||||||||||  ||||||||||| || | ||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||  |||||||||    
T  20298874 taatgccaagatgtcgttggagacttaaacagtttgttgttgttattg-aaatgc-aaactttccgctgcatgattttgaagttattaaacatgttgaat 20298777  T
Q  224 taaatagttttattttct 241  Q
    | ||||||||||||||||    
T  20298776 tgaatagttttattttct 20298759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 31 - 241
Target Start/End: Complemental strand, 52399854 - 52399647
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | ||||||| ||||||| |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  52399854 ttatattattttattgttgttttcctcct-atgtatcaaattttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 52399757  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatag 230  Q
    || ||| || ||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  52399756 caggatattgttggagatttacatcgttgtggttgttattgaaa-tgcaaaactttccgctgcagtattttgaagttatgactgatgttgaattaaatag 52399658  T
Q  231 ttttattttct 241  Q
    |||||||||||    
T  52399657 ttttattttct 52399647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 63 - 241
Target Start/End: Complemental strand, 24065847 - 24065671
Alignment:
Q  63 gtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttattggagacttacaccgttgttg 162  Q
    ||||| ||||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||| ||| || ||||||| ||||| |||||| |    
T  24065847 gtatcaaattttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgccaggatattgttggagatttacatcgttgtag 24065749  T
Q  163 ttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  24065748 ttgttattgaaa-tgcaaaactttccgctgcattattttgaagttatgactgatgttgaattaaatagttttattttct 24065671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 31 - 241
Target Start/End: Original strand, 26739630 - 26739837
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | ||||||| ||||||| |||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  26739630 ttatattattttattgttgttttcctcct-atgtatcaaattttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 26739727  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatag 230  Q
    || ||| || ||||||| ||||| |||||| |||||||| |||| |||||||||||||||||||  |||| |||||||| | ||||||||||||||||||    
T  26739728 caggatattgttggagatttacatcgttgtggttgttatagaaa-tgcaaaactttccgctgcaatatttagaagttataactgatgttgaattaaatag 26739826  T
Q  231 ttttattttct 241  Q
    |||||||||||    
T  26739827 ttttattttct 26739837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 31 - 241
Target Start/End: Complemental strand, 17379026 - 17378818
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttg-ttggtcgacttattgttgtttaggcttaatg 129  Q
    ||||||||| ||||||||||||||||  | ||||||| | ||||| |||||||||||||||||||||  ||||   ||||||||||||||||||||||||    
T  17379026 ttatattattttattgttgttttcctcct-atgtatcaatttttggaacttgttgatgtggccctttcattggctaacttattgttgtttaggcttaatg 17378928  T
Q  130 ccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaat 228  Q
    |||||||||| ||||||| | | ||  |||||||||||||||||| |||||| ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  17378927 ccaagatgttgttggagaataaaaca-ttgttgttgttattgaaa-tgcaaa-ctttccgctgcataattattgaagttatgaatgatgttgaattaaat 17378831  T
Q  229 agttttattttct 241  Q
    |||||||||||||    
T  17378830 agttttattttct 17378818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 34 - 241
Target Start/End: Original strand, 39190220 - 39190425
Alignment:
Q  34 tattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaa 133  Q
    |||||| | ||||||||||||| || |||||||| ||||||| |||||||||||||| || ||  ||||   |||| |||||||||||||||||||||||    
T  39190220 tattatttcattgttgttttcccttccatgtatcaaattttggaacttgttgatgtgccctttcattggctaactt-ttgttgtttaggcttaatgccaa 39190318  T
Q  134 gatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||| ||||||| ||| |   ||||||||| ||||||||||||||||| ||||||||||| | ||||||||||||| || ||||||||||||||||||    
T  39190319 gatgttgttggaga-ttaaaatattgttgttgctattgaaaatgcaaaacgttccgctgcattaatttgaagttatgactgttgttgaattaaatagttt 39190417  T
Q  234 tattttct 241  Q
    ||||||||    
T  39190418 tattttct 39190425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 241
Target Start/End: Complemental strand, 11387565 - 11387359
Alignment:
Q  33 atattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttg-ttggtcgacttattgttgtttaggcttaatgcc 131  Q
    ||||||| ||||||||||||||||  | ||||||| | ||||| |||||||||||||||||||||  ||||   ||||||||||||||||||||||||||    
T  11387565 atattattttattgttgttttcctcct-atgtatcaatttttggaacttgttgatgtggccctttcattggctaacttattgttgtttaggcttaatgcc 11387467  T
Q  132 aagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaatag 230  Q
    |||||||| ||||||| ||| | | |||||||| ||||||||| |||||| ||||||||||||| | | |||||||||||||||||||||| ||||||||    
T  11387466 aagatgttgttggaga-ttaaaacattgttgttattattgaaa-tgcaaa-ctttccgctgcataaatattgaagttatgaatgatgttgacttaaatag 11387370  T
Q  231 ttttattttct 241  Q
    |||||||||||    
T  11387369 ttttattttct 11387359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 33 - 241
Target Start/End: Original strand, 27694027 - 27694233
Alignment:
Q  33 atattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttg-ttggtcgacttattgttgtttaggcttaatgcc 131  Q
    ||||||| ||||||||||||||||  | ||||||| | ||||| |||||||||||||||||||||  ||||   ||||||||||||||||||||||||||    
T  27694027 atattattttattgttgttttcctcct-atgtatcaatttttggaacttgttgatgtggccctttcattggctaacttattgttgtttaggcttaatgcc 27694125  T
Q  132 aagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcat-gattttgaagttatgaatgatgttgaattaaatag 230  Q
    |||||||| ||||||| ||| | | |||| ||| |||||| |||||| ||||||||||||||||  || |||||||||||||||||||||| ||||||||    
T  27694126 aagatgttgttggaga-ttaaaacattgtggttattattg-aaatgc-aaactttccgctgcataaatattgaagttatgaatgatgttgacttaaatag 27694222  T
Q  231 ttttattttct 241  Q
    |||||||||||    
T  27694223 ttttattttct 27694233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 42625836 - 42625688
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||||||||||||||||||||||||   ||||||| | ||||| |||||||||||||||||||||||| || |||||||||||| |    
T  42625836 ggatgagaattattatattatattattgttgttttccttcctatgtatcaatttttggaacttgttgatgtggccctttgttagttgacttattgttgat 42625737  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgtt 167  Q
    ||| |||||||| |||||||| ||||||| ||  |||||||||||||||    
T  42625736 tagacttaatgctaagatgttgttggagaatttaaccgttgttgttgtt 42625688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 241
Target Start/End: Complemental strand, 9269469 - 9269346
Alignment:
Q  118 ttaggcttaatgccaagatgttatt-ggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgat 216  Q
    |||||||| ||||||||||||| || ||||| ||  ||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| || |||    
T  9269469 ttaggctttatgccaagatgttgtttggagaatttaaccgttgttgttgttatttgaaatgcaaa-ctttccgctgcatgattttgaagttattaaagat 9269371  T
Q  217 gttgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||||    
T  9269370 gttgaattaaatagttttattttct 9269346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 241
Target Start/End: Complemental strand, 36917388 - 36917182
Alignment:
Q  39 tattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatg 137  Q
    ||||||||||||||| | || | ||||||| | ||||| |||||  ||||||||||||| |||||| || |||||||||||||| ||||||||||||||     
T  36917388 tattattgttgtttttccttcctatgtatcaatttttggaacttaatgatgtggccctt-gttggttgatttattgttgtttagacttaatgccaagata 36917290  T
Q  138 ttatt-ggaga-cttacaccgttgttgttgttattga---aaatgcaaaactttccgctgcatgatttt-gaagttatgaatgatgttgaattaaatagt 231  Q
    || || ||||| |||| ||||||||||||||| ||     ||||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  36917289 ttgtttggagaactta-accgttgttgttgttgttatgtgaaatgcaaa-cattccgctgcatgattttcgaagttatgaaagatgttgaattaaatagt 36917192  T
Q  232 tttattttct 241  Q
    ||||||||||    
T  36917191 tttattttct 36917182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 71 - 241
Target Start/End: Complemental strand, 21949023 - 21948855
Alignment:
Q  71 ttttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttatt-ggagacttacaccgttgttgttgttat 169  Q
    ||||| ||||||||| | ||||||| || |||| ||  |||||||||| |||||| |||||||||| ||||| ||||| ||  ||||||||||| |||||    
T  21949023 ttttggaacttgttgttatggccctatgatggttga--tattgttgtt-aggctttatgccaagatattatttggagaatttaaccgttgttgtggttat 21948927  T
Q  170 tgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    |  ||||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  21948926 ttgaaatgcaag-ctttccgctgcataattattgaagttatgaatgatgttgaattaaatagttttattttct 21948855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 71 - 241
Target Start/End: Complemental strand, 21962584 - 21962416
Alignment:
Q  71 ttttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttatt-ggagacttacaccgttgttgttgttat 169  Q
    ||||| ||||||||| | ||||||| || |||| ||  |||||||||| |||||| |||||||||| ||||| ||||| ||  ||||||||||| |||||    
T  21962584 ttttggaacttgttgttatggccctatgatggttga--tattgttgtt-aggctttatgccaagatattatttggagaatttaaccgttgttgtggttat 21962488  T
Q  170 tgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    |  ||||||||  ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  21962487 ttgaaatgcaag-ctttccgctgcataattattgaagttatgaatgatgttgaattaaatagttttattttct 21962416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 20578636 - 20578552
Alignment:
Q  38 atattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggc 123  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| | |||||||||||||||||||||||||||||    
T  20578636 atattattgttgttttcctttccatgtatcaaattttgaa-cttgttgatgtggtcttttgttggtcgacttattgttgtttaggc 20578552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 20586330 - 20586246
Alignment:
Q  38 atattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggc 123  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||| | |||||||||||||||||||||||||||||    
T  20586330 atattattgttgttttcctttccatgtatcaaattttgaa-cttgttgatgtggtcttttgttggtcgacttattgttgtttaggc 20586246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 29597367 - 29597470
Alignment:
Q  44 ttgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttattg 143  Q
    ||||||||||||||   ||||||| | ||||| |||||| ||||||| |||||||||||| || ||||||||||||||||||||||||||||| ||||||    
T  29597367 ttgttgttttccttcctatgtatcaatttttggaacttgatgatgtgaccctttgttggttgatttattgttgtttaggcttaatgccaagatattattg 29597466  T
Q  144 gaga 147  Q
    ||||    
T  29597467 gaga 29597470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 42625651 - 42625568
Alignment:
Q  156 gttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  42625651 gttgttgttgttattgaaa-tgcaaa-ctttccgctgcatgattttgaagttattaaacatgttgaattaaatagttttattttct 42625568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 11385426 - 11385342
Alignment:
Q  157 ttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||| ||||||||||||||||| ||||||||||| | ||||||||| ||| || ||||||||||||||||||||||||||    
T  11385426 ttgttgttgctattgaaaatgcaaaacgttccgctgcattaatttgaagttttgactgttgttgaattaaatagttttattttct 11385342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 241
Target Start/End: Original strand, 33684740 - 33684935
Alignment:
Q  44 ttgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgtta-tt 142  Q
    |||||||||||||  | ||||||| | ||||| |||||| ||||||||||||||| |||| ||  |||||||| |||||||| |||||||||| ||| ||    
T  33684740 ttgttgttttcctcct-atgtatcaatttttggaacttgatgatgtggccctttgatggttga--tattgttg-ttaggctttatgccaagatattattt 33684835  T
Q  143 ggag-acttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgat-tttgaagttatgaatgatgttgaattaaatagttttattttc 240  Q
    |||| | ||  ||||||||||| ||||||  |||||| |||||||||||||||| || ||||||||||| ||  |||| ||||||||||| |||||||||    
T  33684836 ggagaattttaaccgttgttgtggttatttgaaatgc-aaactttccgctgcataatctttgaagttattaaacatgtcgaattaaatagctttattttc 33684934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 37674965 - 37674744
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||| ||| |||||||||||||||||| | || | ||||||| | ||||| |||||| ||||||||||||||| |||| ||  |||||||||    
T  37674965 ggatgggaattaatat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggccctttgatggttga--tattgttgt 37674869  T
Q  118 ttaggcttaatgccaagatgttat--tggagacttaca-ccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaat 213  Q
    | || |||| ||||||||| ||||  |||||  ||  | |||||||||| ||||||  ||||||||| ||||||||||||| ||||| || |||||||||    
T  37674868 t-agactta-tgccaagatattatgttggaggtttttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataatttttgaggttatgaat 37674772  T
Q  214 gatgttgaattaaatagttttattttct 241  Q
    ||||| || |||||||||||||||||||    
T  37674771 gatgtcgatttaaatagttttattttct 37674744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 37681658 - 37681437
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||| ||| |||||||||||||||||| | || | ||||||| | ||||| |||||| ||||||||||||||| |||| ||  |||||||||    
T  37681658 ggatgagaattaatat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggccctttgatggttga--tattgttgt 37681562  T
Q  118 ttaggcttaatgccaagatgttat--tggagacttaca-ccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaat 213  Q
    | || |||| ||||||||| ||||  |||||  ||  | |||||||||| ||||||  ||||||||| ||||||||||||| ||||| || |||||||||    
T  37681561 t-agactta-tgccaagatattatgttggaggtttttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataatttttgaggttatgaat 37681465  T
Q  214 gatgttgaattaaatagttttattttct 241  Q
    ||||| || |||||||||||||||||||    
T  37681464 gatgtcgatttaaatagttttattttct 37681437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 24849571 - 24849513
Alignment:
Q  184 tttccgctgcatgatttt-gaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||    
T  24849571 tttccgctgcataatttttgaagttatgaatgatgttgaattaaatagttttatcttct 24849513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 38133731 - 38133643
Alignment:
Q  153 accgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaag-ttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||| ||||||  ||||||||| ||||||||||||| |||||  || ||||||||||||| || |||||||||||||||||||    
T  38133731 accgttgttgtggttatttgaaatgcaaa-ctttccgctgcataattttttaggttatgaatgatgtcgatttaaatagttttattttct 38133643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 1527308 - 1527362
Alignment:
Q  36 ttatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtgg 91  Q
    ||||||||||||||||| | ||| |||||||||||||||| |||||||||||||||    
T  1527308 ttatattattgttgttt-cttttccatgtatcgaattttggaacttgttgatgtgg 1527362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 36212519 - 36212573
Alignment:
Q  36 ttatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtgg 91  Q
    ||||||||||||||||| | ||| |||||||||||||||| |||||||||||||||    
T  36212519 ttatattattgttgttt-cttttccatgtatcgaattttggaacttgttgatgtgg 36212573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 36213378 - 36213432
Alignment:
Q  36 ttatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtgg 91  Q
    ||||||||||||||||| | ||| ||||||||| |||||| |||||||||||||||    
T  36213378 ttatattattgttgttt-cttttccatgtatcggattttggaacttgttgatgtgg 36213432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 18417733 - 18417689
Alignment:
Q  39 tattattgttgttttccttttcatgtatcgaattttgaaacttgt 83  Q
    ||||||||||| |||||||| |||||||| ||||||| |||||||    
T  18417733 tattattgttgctttcctttccatgtatcaaattttggaacttgt 18417689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 22500568 - 22500345
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||||||||||||||||||||||||   ||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||| |    
T  22500568 ggatgggaattattatattatattattgttgttttccttcctatgtatcaatttttggaacttgttgatgtggccctttgttggttgacttattgttgat 22500469  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgt---tgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatga 215  Q
    ||||||||||||||||||||| ||||||| ||  |||||||||||   |||||||| |||||| |||||||||||||||||||||||||||||| ||  |    
T  22500468 taggcttaatgccaagatgttgttggagaatttaaccgttgttgttgttgttattg-aaatgc-aaactttccgctgcatgattttgaagttattaaaca 22500371  T
Q  216 tgttgaattaaatagttttattttct 241  Q
    ||||||||||||||||||||||||||    
T  22500370 tgttgaattaaatagttttattttct 22500345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 22507146 - 22506923
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||||||||||||||||||||||||   ||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||| |    
T  22507146 ggatgggaattattatattatattattgttgttttccttcctatgtatcaatttttggaacttgttgatgtggccctttgttggttgacttattgttgat 22507047  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgt---tgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatga 215  Q
    ||||||||||||||||||||| ||||||| ||  |||||||||||   |||||||| |||||| |||||||||||||||||||||||||||||| ||  |    
T  22507046 taggcttaatgccaagatgttgttggagaatttaaccgttgttgttgttgttattg-aaatgc-aaactttccgctgcatgattttgaagttattaaaca 22506949  T
Q  216 tgttgaattaaatagttttattttct 241  Q
    ||||||||||||||||||||||||||    
T  22506948 tgttgaattaaatagttttattttct 22506923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 18566210 - 18565991
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| || ||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||||||||| || |    
T  18566210 ggatgggatttattatattatattattgttgttttcctttccatgtatcaaattttggaacttgttgatgtggccc-ttgttggttgacttattgatgat 18566112  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||||||||||||||||| | ||||||||||| | |||||||||||||||||  ||||| |||||||||||||||||||||||||||||| ||  || |    
T  18566111 taggcttaatgccaagatgatgttggagacttaaatcgttgttgttgttattg-gaatgc-aaactttccgctgcatgattttgaagttattaaacatat 18566014  T
Q  219 tgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||    
T  18566013 tgaattaaatagttttattttct 18565991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 32 - 241
Target Start/End: Original strand, 14615497 - 14615703
Alignment:
Q  32 tatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgcc 131  Q
    |||||||| ||||||||||||||||  | ||||||| | ||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  14615497 tatattattttattgttgttttcctcct-atgtatcaatttttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgcc 14615594  T
Q  132 aagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagt 231  Q
    | ||| || ||||||| ||| | |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  14615595 aggatattgttggagatttaaatcgttgtggttgttattgaaa-tgcaaaactttccgctgcattattttgaagttatgactgatgttgaattaaatagt 14615693  T
Q  232 tttattttct 241  Q
    ||||||||||    
T  14615694 tttattttct 14615703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 32 - 241
Target Start/End: Original strand, 22248780 - 22248986
Alignment:
Q  32 tatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgcc 131  Q
    |||||||| ||||||||||||||||  | ||||||| | ||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  22248780 tatattattttattgttgttttcctcct-atgtatcaatttttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgcc 22248877  T
Q  132 aagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagt 231  Q
    | ||  || ||||||| ||| | |||||| || |||||||||| |||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  22248878 aggaaattgttggagatttaaatcgttgtggtggttattgaaa-tgcaaaactttccgctgcattattttgaagatatgactgatgttgaattaaatagt 22248976  T
Q  232 tttattttct 241  Q
    ||||||||||    
T  22248977 tttattttct 22248986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 31 - 241
Target Start/End: Complemental strand, 11994700 - 11994492
Alignment:
Q  31 ttatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgc 130  Q
    ||||||||| ||||||||||||||||  | ||||||| | ||||| |||||  |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  11994700 ttatattattttattgttgttttcctcct-atgtatcaatttttggaacttaatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgc 11994603  T
Q  131 caagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaata 229  Q
    || ||| || ||||||| ||| | |||||| |||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  11994602 caggatattgttggagatttaaatcgttgtggttggtattgaaa-tgcaaaactttccgctgcataattattgaagttatgaatgatgttgaattaaata 11994504  T
Q  230 gttttattttct 241  Q
    |||||| |||||    
T  11994503 gttttactttct 11994492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 19507660 - 19507443
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||| |||||||||||||||||| | || |||||||| ||||||| |||||||||||||||||| ||| ||||  ||||||||||| |    
T  19507660 ggatgagaattattat-ttatattattgttgtttttccttccatgtatcaaattttggaacttgttgatgtggccc-ttgatggttaacttattgttgat 19507563  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatga-ttttgaagttatgaatgatg 217  Q
    ||||||||||||||||||||| ||||||||||| | |   |||||||||| |  |||||| |||||||||||||||||| ||||||||||||||| ||||    
T  19507562 taggcttaatgccaagatgttgttggagacttaaaac--cgttgttgttaat-caaatgc-aaactttccgctgcatgatttttgaagttatgaacgatg 19507467  T
Q  218 ttgaattaaatagttttattttct 241  Q
    |||| |||||||||||||||||||    
T  19507466 ttgagttaaatagttttattttct 19507443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 34 - 241
Target Start/End: Original strand, 7508599 - 7508804
Alignment:
Q  34 tattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaa 133  Q
    |||||| | ||||||||||||| || |||||||| ||||||| |||||||||||||| || ||  ||||   |||| |||||||||||||||||||||||    
T  7508599 tattatttcattgttgttttcccttccatgtatcaaattttggaacttgttgatgtgccctttcattggctaactt-ttgttgtttaggcttaatgccaa 7508697  T
Q  134 gatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||| ||||||| ||| |   ||||||||| ||||||||||||||||||||||||||||| | ||||||||| ||| || ||||||||||||||||||    
T  7508698 gatgttgttggaga-ttaaaatattgttgttgctattgaaaatgcaaaactttccgctgcattaatttgaagttttgactgttgttgaattaaatagttt 7508796  T
Q  234 tattttct 241  Q
    ||||||||    
T  7508797 tattttct 7508804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 34 - 241
Target Start/End: Original strand, 24795599 - 24795804
Alignment:
Q  34 tattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaa 133  Q
    |||||| | ||||||||||||| || |||||||| ||||||| |||||||||||||| || ||  ||||   |||| |||||||||||||||||||||||    
T  24795599 tattatttcattgttgttttcccttccatgtatcaaattttggaacttgttgatgtgccctttcattggctaactt-ttgttgtttaggcttaatgccaa 24795697  T
Q  134 gatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||| ||||||| ||| |   ||||||||| ||||||||||||||||| ||||||||||| | ||||||||| ||| || ||||||||||||||||||    
T  24795698 gatgttgttggaga-ttaaaatattgttgttgctattgaaaatgcaaaacgttccgctgcattaatttgaagttttgactgttgttgaattaaatagttt 24795796  T
Q  234 tattttct 241  Q
    ||||||||    
T  24795797 tattttct 24795804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 34 - 241
Target Start/End: Original strand, 24800966 - 24801171
Alignment:
Q  34 tattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaa 133  Q
    |||||| | ||||||||||||| || |||||||| ||||||| |||||||||||||| || ||  ||||   |||| |||||||||||||||||||||||    
T  24800966 tattatttcattgttgttttcccttccatgtatcaaattttggaacttgttgatgtgccctttcattggctaactt-ttgttgtttaggcttaatgccaa 24801064  T
Q  134 gatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||| ||||||| ||| |   ||||||||| ||||||||||||||||| ||||||||||| | ||||||||| ||| || ||||||||||||||||||    
T  24801065 gatgttgttggaga-ttaaaatattgttgttgctattgaaaatgcaaaacgttccgctgcattaatttgaagttttgactgttgttgaattaaatagttt 24801163  T
Q  234 tattttct 241  Q
    ||||||||    
T  24801164 tattttct 24801171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 34 - 241
Target Start/End: Original strand, 14882899 - 14883104
Alignment:
Q  34 tattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaa 133  Q
    |||||| | ||||||||||||| || |||||||| ||||||| |||| | ||||||| || ||  ||||   |||| |||||||||||||||||||||||    
T  14882899 tattatttcattgttgttttcccttccatgtatcaaattttggaactcgctgatgtgccctttcattggctaactt-ttgttgtttaggcttaatgccaa 14882997  T
Q  134 gatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||| ||||||| ||| |   ||||||||| ||||||||||||||||||||||||||||| | |||||||||| || || ||||||||||||||||||    
T  14882998 gatgttgttggaga-ttaaaatattgttgttgctattgaaaatgcaaaactttccgctgcattaatttgaagttaagactgttgttgaattaaatagttt 14883096  T
Q  234 tattttct 241  Q
    ||||||||    
T  14883097 tattttct 14883104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 34 - 241
Target Start/End: Original strand, 14889576 - 14889781
Alignment:
Q  34 tattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaa 133  Q
    |||||| | ||||||||||||| || |||||||| ||||||| |||| | ||||||| || ||  ||||   |||| |||||||||||||||||||||||    
T  14889576 tattatttcattgttgttttcccttccatgtatcaaattttggaactcgctgatgtgccctttcattggctaactt-ttgttgtttaggcttaatgccaa 14889674  T
Q  134 gatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttt 233  Q
    |||||| ||||||| ||| |   ||||||||| ||||||||||||||||||||||||||||| | |||||||||| || || ||||||||||||||||||    
T  14889675 gatgttgttggaga-ttaaaatattgttgttgctattgaaaatgcaaaactttccgctgcattaatttgaagttaagactgttgttgaattaaatagttt 14889773  T
Q  234 tattttct 241  Q
    ||||||||    
T  14889774 tattttct 14889781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 39 - 241
Target Start/End: Original strand, 16775586 - 16775793
Alignment:
Q  39 tattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgt 138  Q
    |||||||||||||||||||   ||||||| | ||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||| || |    
T  16775586 tattattgttgttttccttcctatgtatcaatttttggaacttgttgatgtggccctttgttggttgatttattgttgtttaggcttaatgccaaaatat 16775685  T
Q  139 --tattggagacttacacc---gttgttgttgttattgaaaatgcaaaactttccgctgcatgatt-ttgaagttatgaatgatgttgaattaaatagtt 232  Q
      | ||||||| ||  |||   |||||||||||||||  |||||| |||| ||||||||||| ||| ||||||||||| | |||||||||||||||||||    
T  16775686 tgttttggagaatttaaccgttgttgttgttgttatttgaaatgc-aaacattccgctgcataattgttgaagttatggaagatgttgaattaaatagtt 16775784  T
Q  233 ttattttct 241  Q
    |||||||||    
T  16775785 ttattttct 16775793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 61 - 241
Target Start/End: Complemental strand, 596811 - 596632
Alignment:
Q  61 atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgtta-ttggagactt--acaccgt 157  Q
    ||||||| | ||||| |||||| ||||||| ||||| | |||| || ||||||||||| || |||||||||||||| ||| ||||||| ||  |||| ||    
T  596811 atgtatcaatttttggaacttgatgatgtgaccctt-gctggttgatttattgttgtt-agacttaatgccaagatattaattggagattttaacacagt 596714  T
Q  158 tgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||| |||||| ||||||||||||||||||||||    
T  596713 tgttgttgttattgaaa-tgcaaa-ctttccgctgcataattttgaggttatgattgatgtcgaattaaatagttttattttct 596632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 41 - 241
Target Start/End: Original strand, 19800888 - 19801084
Alignment:
Q  41 ttattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgtta 140  Q
    |||||||||||||| ||   |||||||| |||||| ||||||||| | ||||||| || |||| ||   ||||||||| |||||| |||||||||||||     
T  19800888 ttattgttgttttctttcctatgtatcgtattttggaacttgttgttatggccctatgatggttgaa--attgttgtt-aggctttatgccaagatgttg 19800984  T
Q  141 tt-ggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagttttatttt 239  Q
     | ||||| ||  | | ||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  19800985 ctcggagaatttaatc-ttgttgttgttatttgaaatgcaaa-ctttccgctgcatgattttgaagttatgaaagatgttgaattaaatagctttatttt 19801082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 241
Target Start/End: Complemental strand, 37565653 - 37565463
Alignment:
Q  41 ttattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgtta 140  Q
    |||||||||||||||||   ||||||| | ||||| |||||| |||||||||||||||||||| ||           ||||||||||||||||||| ||     
T  37565653 ttattgttgttttccttcctatgtatcaatttttggaacttgatgatgtggccctttgttggttga-----------ttaggcttaatgccaagatattg 37565565  T
Q  141 -ttggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatgatgttgaattaaatagttttattt 238  Q
     ||||||||||  |||||||| |||||||||  | |||||||  || ||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  37565564 cttggagactttaaccgttgtcgttgttatttgagatgcaaatatt-ccgctgcatgatttttgaagttatgaaagatgttgaattaaatagttttattt 37565466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 24007784 - 24007697
Alignment:
Q  37 tatattattgttgtttt-ccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggc 123  Q
    ||||||||||||||||| ||||| |||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  24007784 tatattattgttgtttttcctttccatgtatcaaattttggaacttgttgatgtggtcctttgttggtcgacttattgttgtttaggc 24007697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 33535927 - 33535706
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgt 117  Q
    ||||| |||||| ||| |||||||||||||||||| | || | ||||||| | ||||| |||||| ||||||||||||||| |||| ||  |||||||||    
T  33535927 ggatgggaattactat-ttatattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggccctttgatggttga--tattgttgt 33535831  T
Q  118 ttaggcttaatgccaagatgttatt-ggag-acttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgat-tttgaagttatgaatg 214  Q
    | |||||| |||||||||| ||||| |||| | ||  ||||||||||| ||||||  ||||||||| ||||||||||||| || ||| | ||||||||||    
T  33535830 t-aggctttatgccaagatattatttggaggattttaaccgttgttgtggttatttgaaatgcaaa-ctttccgctgcataatgttttaggttatgaatg 33535733  T
Q  215 atgttgaattaaatagttttattttct 241  Q
    |||| || |||||||||||||||||||    
T  33535732 atgtcgatttaaatagttttattttct 33535706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 7774167 - 7774294
Alignment:
Q  19 ggatgtgaattattat-attat-attattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttg 116  Q
    ||||| |||||||||| ||||| |||||||||  |||||||   ||||||| | ||||| |||||| |||||||||||||||||||| || |||||||||    
T  7774167 ggatgagaattattattattattattattgtt--tttccttcctatgtatcaatttttggaacttgatgatgtggccctttgttggttgatttattgttg 7774264  T
Q  117 tttaggcttaatgccaagatgttattggag 146  Q
    |||||||||||||||||||| | |||||||    
T  7774265 tttaggcttaatgccaagatatcattggag 7774294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 232
Target Start/End: Complemental strand, 20989915 - 20989741
Alignment:
Q  61 atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttatt--ggagacttacaccgtt 158  Q
    |||||||  |||||| |||||| || ||||||||| || |||  || |||| |||||| |||||| |||||||||| || ||  ||||| ||  ||||||    
T  20989915 atgtatcttattttggaacttgatgttgtggccctatgatggaagaattat-gttgttaaggctttatgccaagatattgttttggagaatttaaccgtt 20989817  T
Q  159 gttgttgtt---attgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagtt 232  Q
    |||||||||   ||| ||||||||||  || ||||||||||||||||||||||| || |||||||||||||||||||    
T  20989816 gttgttgttgctatttaaaatgcaaatatt-ccgctgcatgattttgaagttattaaagatgttgaattaaatagtt 20989741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 29747233 - 29747290
Alignment:
Q  185 ttccgctgcatga-ttttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||    
T  29747233 ttccgctgcataaattttgaagttatggatgatgttgaattaaatagttttattttct 29747290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 10685706 - 10685652
Alignment:
Q  36 ttatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtgg 91  Q
    ||||||||||||||||| | ||| |||||||||||||||| |||||||||||||||    
T  10685706 ttatattattgttgttt-cttttccatgtatcgaattttggaacttgttgatgtgg 10685652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 20340163 - 20340107
Alignment:
Q  19 ggatgtgaattattatattatattattgttg-ttttccttttcatgtatcgaattttg 75  Q
    ||||| |||||||||| |||||||||||||| ||||||||| |||||||| |||||||    
T  20340163 ggatgagaattattat-ttatattattgttgtttttcctttccatgtatcaaattttg 20340107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 2051 - 1832
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    |||||||| |||||||||||||||||||||||||||| || |||||||| ||||||| |||||||||||||||||| |||||||| ||||||||| || |    
T  2051 ggatgtgatttattatattatattattgttgttttcccttccatgtatcaaattttggaacttgttgatgtggccc-ttgttggttgacttattgatgat 1953  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||||||||  ||||| |||||||| ||||||||||||||||||||| ||  || |    
T  1952 taggcttaatgccaagatgatgttggagacttaaaccgttgttgttgttattg-gaatgc-aaactttctgctgcatgattttgaagttattaaatatat 1855  T
Q  219 tgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||    
T  1854 tgaattaaatagttttattttct 1832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 24340 - 24560
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||||||||||||||||||||||||   ||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||| |    
T  24340 ggatgggaattattatattatattattgttgttttccttcctatgtatcaatttttggaacttgttgatgtggccctttgttggttgacttattgttgat 24439  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||||||||||||||||||| |||| || ||  ||  | ||||||||||||| |||||| |||||||||||||||||||||||||||||| ||  ||||    
T  24440 taggcttaatgccaagatgttgttggggaatttaacaatagttgttgttattg-aaatgc-aaactttccgctgcatgattttgaagttattaaacatgt 24537  T
Q  219 tgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||    
T  24538 tgaattaaatagttttattttct 24560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 241
Target Start/End: Complemental strand, 103914 - 103695
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||||||||||||||||||||||||   ||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||| |    
T  103914 ggatgggaattattatattatattattgttgttttccttcctatgtatcaatttttggaacttgttgatgtggccctttgttggttgacttattgttgat 103815  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||||||||||||||| ||| ||||||| ||  |||||||| |||||||||| |||||  |||||||||||||||||| ||||||||||| ||  ||||    
T  103814 taggcttaatgccaagaggttgttggagaatttaaccgttgtggttgttattg-aaatg-taaactttccgctgcatga-tttgaagttattaaacatgt 103718  T
Q  219 tgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||    
T  103717 tgaattaaatagttttattttct 103695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 5175 - 5392
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||||||| ||||||||||||||||| |||| ||| ||||||| |||||||||||||||||| |||||||| |||||||||||| |    
T  5175 ggatgggaattattatattatagtattgttgttttcctttccatgaatcaaattttggaacttgttgatgtggccc-ttgttggttgacttattgttgat 5273  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    ||||| ||||||||||||||| ||||||||||| ||||||| |||| || |   |||||  |||||||||||||||||||||||||||||| ||  ||||    
T  5274 taggcataatgccaagatgttgttggagacttaaaccgttgatgttttttt---aaatg-taaactttccgctgcatgattttgaagttattaaacatgt 5369  T
Q  219 tgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||    
T  5370 tgaattaaatagttttattttct 5392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 32 - 241
Target Start/End: Original strand, 19526 - 19732
Alignment:
Q  32 tatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgcc 131  Q
    |||||||| ||||||||||||||||  | ||||||| | ||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  19526 tatattattttattgttgttttcctcct-atgtatcaatttttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgcc 19623  T
Q  132 aagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagt 231  Q
    | ||| || ||||||| ||| | |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  19624 aggatattgttggagatttaaatcgttgtggttgttattgaaa-tgcaaaactttccgctgcattattttgaagttatgactgatgttgaattaaatagt 19722  T
Q  232 tttattttct 241  Q
    ||||||||||    
T  19723 tttattttct 19732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 39 - 241
Target Start/End: Complemental strand, 14710 - 14507
Alignment:
Q  39 tattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgt 138  Q
    |||||||||| ||||||||   ||||||| | |||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  14710 tattattgttattttccttcctatgtatcaattttttaaacttgttgatgtggccctttgttggttgacttattgttgattaggcttaatgccaagatgt 14611  T
Q  139 tattggagacttacaccgttgttgt---tgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagtttta 235  Q
    | ||||||| ||  |||||||||||   |||||||| |||||| |||||||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  14610 tgttggagaatttaaccgttgttgttgttgttattg-aaatgc-aaactttccgctgcatgattttgaagttattaaacatgttgaattaaatagtttta 14513  T
Q  236 ttttct 241  Q
    ||||||    
T  14512 ttttct 14507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 24668 - 24451
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||| ||| ||||||||||||||||||||||   ||||||| | ||||| ||||||||||||||||||||||||||| ||||||||| || |    
T  24668 ggatgggaattactat-ttatattattgttgttttccttcctatgtatcaatttttggaacttgttgatgtggccctttgttggttgacttattgatgat 24570  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgt 218  Q
    |||||||||||||||| |||| ||||||| ||| || |||| ||||||||||| |||||| |||||||||||||||||||||||||||| | |   ||||    
T  24569 taggcttaatgccaaggtgttgttggagaattaaactgttgatgttgttattg-aaatgc-aaactttccgctgcatgattttgaagttgttagacatgt 24472  T
Q  219 tgaattaaatagttttatttt 239  Q
    |||||||||||||||||||||    
T  24471 tgaattaaatagttttatttt 24451  T

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Target: scaffold1426 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 26 - 241
Target Start/End: Original strand, 361 - 576
Alignment:
Q  26 aattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggctt 125  Q
    |||||||||||||||| |||||||||||||||   ||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  361 aattattatattatatgattgttgttttccttcctatgtatcaatttttggaacttgttgatgtggccctttgttggttgacttattgttgattaggctt 460  T
Q  126 aatgccaagatgttattggagacttacacc---gttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaa 222  Q
     ||||||||||||| ||||||| ||  |||   |||||||||||||||| |||||| |||||||||||||||||||||||||||| | ||   |||||||    
T  461 -atgccaagatgttgttggagaatttaaccgttgttgttgttgttattg-aaatgc-aaactttccgctgcatgattttgaagttgttaaacttgttgaa 557  T
Q  223 ttaaatagttttattttct 241  Q
    | |||||||||||||||||    
T  558 tgaaatagttttattttct 576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 32 - 241
Target Start/End: Original strand, 185 - 390
Alignment:
Q  32 tatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgcc 131  Q
    |||||||| |||||||||||| |||  | ||||||| | ||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  185 tatattattttattgttgttt-cctcct-atgtatcaatttttggaacttgatgatgtggccctttgttggttgactt-ttgttgtttaggcttaatgcc 281  T
Q  132 aagatgttattggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgatgttgaattaaatagt 231  Q
    | ||| || ||||||| ||| | |||||| ||||||||||||| ||||||| |||||||||||| ||||||||||||||| |||||||||||| ||||||    
T  282 aggatattgttggagatttaaatcgttgtggttgttattgaaa-tgcaaaattttccgctgcattattttgaagttatgactgatgttgaatttaatagt 380  T
Q  232 tttattttct 241  Q
    ||||||||||    
T  381 tttattttct 390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1752 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1752
Description:

Target: scaffold1752; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 97 - 235
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtt 118  Q
    ||||| |||||||||||| | ||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||||||||| || |    
T  97 ggatgggaattattatataa-attattgttgttttcctttccatgtatcaaattttggaacttgttgatgtggccc-ttgttggttgacttattgatgat 194  T
Q  119 taggcttaatgccaagatgttattggagacttacaccgttg 159  Q
    ||||||||| ||||||||||| ||||||||||| |||||||    
T  195 taggcttaacgccaagatgttgttggagacttaaaccgttg 235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 241
Target Start/End: Original strand, 65835 - 66039
Alignment:
Q  27 attattatattatattattgttg-ttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggctt 125  Q
    |||||||||| || ||||||||| ||||||||   ||||||| | ||||| |||||| ||||||||||||||||||||           |||||||||||    
T  65835 attattatat-attttattgttgattttccttcctatgtatcaatttttggaacttgatgatgtggccctttgttggt-----------tgtttaggctt 65922  T
Q  126 aatgccaagatgtta-ttggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatgatgttgaat 223  Q
    ||||||||||| ||  ||||||||||  |||||||| |||||||||  | |||||||  || ||||||||||||||| ||||||||||| ||||||||||    
T  65923 aatgccaagatattgcttggagactttaaccgttgtcgttgttatttgagatgcaaatatt-ccgctgcatgatttttgaagttatgaaagatgttgaat 66021  T
Q  224 taaatagttttattttct 241  Q
    ||||||||||||||||||    
T  66022 taaatagttttattttct 66039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 7300 - 7223
Alignment:
Q  69 aattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttattggag 146  Q
    ||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
T  7300 aattttggaacttgatgatgtggccctttgttggttgatttattgttgtttaggcttaatgccaagatattattggag 7223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 12486 - 12412
Alignment:
Q  72 tttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttattggag 146  Q
    |||| |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
T  12486 tttggaacttgatgatgtggccctttgttggttgatttattgttgtttaggcttaatgccaagatattattggag 12412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 241
Target Start/End: Original strand, 1642 - 1764
Alignment:
Q  118 ttaggcttaatgccaagatgttatt-ggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgat 216  Q
    |||||||| ||||||||||||| || ||||| ||  | ||||||||||||||||  || |||||| |||||||||||||||||| ||||||| ||| |||    
T  1642 ttaggctttatgccaagatgttgtttggagaatttaatcgttgttgttgttatttgaa-tgcaaa-ctttccgctgcatgatttcgaagttacgaaagat 1739  T
Q  217 gttgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||||    
T  1740 gttgaattaaatagttttattttct 1764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 241
Target Start/End: Complemental strand, 31403 - 31281
Alignment:
Q  118 ttaggcttaatgccaagatgttatt-ggagacttacaccgttgttgttgttattgaaaatgcaaaactttccgctgcatgattttgaagttatgaatgat 216  Q
    |||||||| ||||||||||||| || ||||| ||  | ||||||||||||||||  || |||||| |||||||||||||||||| ||||||| ||| |||    
T  31403 ttaggctttatgccaagatgttgtttggagaatttaatcgttgttgttgttatttgaa-tgcaaa-ctttccgctgcatgatttcgaagttacgaaagat 31306  T
Q  217 gttgaattaaatagttttattttct 241  Q
    |||||||||||||||||||||||||    
T  31305 gttgaattaaatagttttattttct 31281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 15903 - 15946
Alignment:
Q  198 ttttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15903 ttttgaagttatgaatgatgttgaattaaatagttttattttct 15946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 28399 - 28442
Alignment:
Q  198 ttttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  28399 ttttgaagttatgaatgatgttgaattaaatagttttattttct 28442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 18799 - 18702
Alignment:
Q  39 tattattgttgttttccttttc-atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagat 136  Q
    ||||||||||||||| | || | ||||||| | ||||| |||||| |||||||||||||||||||| || || |||||| |||||||||||||||||||    
T  18799 tattattgttgtttttccttcctatgtatcaatttttggaacttgatgatgtggccctttgttggttgatttgttgttg-ttaggcttaatgccaagat 18702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 14766 - 14692
Alignment:
Q  61 atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagat 136  Q
    ||||||| | ||||| |||||| |||||||||||||||||| | || || |||||| |||||||||||||||||||    
T  14766 atgtatcaatttttggaacttgatgatgtggccctttgttgtttgatttgttgttg-ttaggcttaatgccaagat 14692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 505 - 562
Alignment:
Q  185 ttccgctgcatgatttt-gaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  505 ttccgctgcataatttttgaagttatgaaagatgttgaattaaatagttttattttct 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 241
Target Start/End: Complemental strand, 49536 - 49357
Alignment:
Q  61 atgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgttatt-ggagacttaca-ccgtt 158  Q
    ||||||| | ||||| |||||| ||||||||||||||| |||| ||  |||||||||| |||| | |||||||||| ||||| ||||| ||  | |||||    
T  49536 atgtatcaatttttggaacttgatgatgtggccctttgatggttga--tattgttgtt-aggcgttatgccaagatattatttggagaattttaaccgtt 49440  T
Q  159 gttgttgttattgaaaatgcaaaactttccgctgcatgat-tttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||| ||| ||  ||||||||| ||||||||| ||| || ||||||||||  ||  |||||||||||||||| ||||||||||    
T  49439 gttgtggttgtttgaaatgcaaa-ctttccgctacataatctttgaagttaataaacatgttgaattaaatagctttattttct 49357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 6345 - 6302
Alignment:
Q  198 ttttgaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  6345 ttttgaagttatgaaagatgttgaattaaatagttttattttct 6302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 74666 - 74769
Alignment:
Q  39 tattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtggccctttgttggtcgacttattgttgtttaggcttaatgccaagatgt 138  Q
    ||||||| |||||||| ||   ||||||| | ||||| |||||| |||||||||||||||||||| || |||||  |||| |||||||||||||| || |    
T  74666 tattattattgttttctttcctatgtatcaatttttggaacttgatgatgtggccctttgttggttgatttattcctgttaaggcttaatgccaaaatat 74765  T
Q  139 tatt 142  Q
    ||||    
T  74766 tatt 74769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 1519 - 1434
Alignment:
Q  156 gttgttgttgttattgaaaatgcaaaactttccgctgcatgatttt-gaagttatgaatgatgttgaattaaatagttttattttct 241  Q
    |||||||||| |||| ||||||||||  || ||| ||||| ||||| ||||||||||| |||||||||||||||||||| |||||||    
T  1519 gttgttgttgctatttaaaatgcaaatatt-ccgttgcataatttttgaagttatgaaagatgttgaattaaatagtttcattttct 1434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 10832 - 10777
Alignment:
Q  19 ggatgtgaattattatattatattattgttgttttccttttcatgtatcgaattttg 75  Q
    ||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  10832 ggatgggaattattat-ttatattattgttgttttcctttccatgtatcaaattttg 10777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 18977 - 19031
Alignment:
Q  36 ttatattattgttgttttccttttcatgtatcgaattttgaaacttgttgatgtgg 91  Q
    ||||||||||||||||| | ||| |||||||||||||||| |||||||||||||||    
T  18977 ttatattattgttgttt-cttttccatgtatcgaattttggaacttgttgatgtgg 19031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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