View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11549_low_22 (Length: 215)
Name: NF11549_low_22
Description: NF11549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11549_low_22 |
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Alignment Details
Target: chr5 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 21 - 200
Target Start/End: Complemental strand, 36920258 - 36920079
Alignment:
| Q |
21 |
gttccaaagtcacaatatccttttctgaggcacacttgatctcattctccgcaatccaatgggctacattgcgaactaagtcatgcattttgacacattt |
120 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36920258 |
gttccaaagtcataatatccttttctgaggcacacttgatctcattctccgcaatccaatgggctacattgcgaactaagtcatgcattttgacacattt |
36920159 |
T |
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| Q |
121 |
tccttcatcaacatctagcaacaaacaagaacttatgagcttatttttagccacagttacttcgttccttgccccttcat |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36920158 |
tccttcattaacatctagcaacaaacaagaacttatgagcttatttttagccacagttacttcgttccttgccccttcat |
36920079 |
T |
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