View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11549_low_24 (Length: 203)

Name: NF11549_low_24
Description: NF11549
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11549_low_24
NF11549_low_24
[»] chr8 (16 HSPs)
chr8 (11-188)||(468477-468654)
chr8 (11-149)||(475060-475198)
chr8 (16-149)||(449120-449253)
chr8 (11-150)||(457390-457529)
chr8 (54-149)||(480523-480618)
chr8 (153-185)||(6899914-6899946)
chr8 (156-186)||(16861781-16861811)
chr8 (153-187)||(29851155-29851189)
chr8 (153-187)||(33299473-33299507)
chr8 (153-186)||(1214794-1214827)
chr8 (153-190)||(5062152-5062189)
chr8 (153-182)||(14762557-14762586)
chr8 (153-186)||(23550867-23550900)
chr8 (156-188)||(28849175-28849207)
chr8 (153-185)||(29441080-29441112)
chr8 (153-185)||(36466794-36466826)
[»] chr2 (8 HSPs)
chr2 (23-149)||(27490085-27490211)
chr2 (153-186)||(22060863-22060896)
chr2 (156-188)||(37985742-37985774)
chr2 (153-186)||(4979153-4979186)
chr2 (153-186)||(4997062-4997095)
chr2 (153-186)||(9527667-9527700)
chr2 (153-186)||(40649267-40649300)
chr2 (153-185)||(18449963-18449995)
[»] scaffold0187 (2 HSPs)
scaffold0187 (153-186)||(10323-10356)
scaffold0187 (153-186)||(20651-20684)
[»] chr7 (15 HSPs)
chr7 (153-186)||(27689126-27689159)
chr7 (153-185)||(27131351-27131383)
chr7 (156-187)||(24161853-24161884)
chr7 (156-186)||(23709778-23709808)
chr7 (156-186)||(40704607-40704637)
chr7 (153-182)||(553989-554018)
chr7 (152-185)||(5113896-5113929)
chr7 (153-186)||(9417635-9417668)
chr7 (153-186)||(17833129-17833162)
chr7 (153-186)||(19293262-19293295)
chr7 (153-186)||(31582012-31582045)
chr7 (153-186)||(46342951-46342984)
chr7 (153-185)||(8251862-8251894)
chr7 (156-184)||(32466191-32466219)
chr7 (156-184)||(32468026-32468054)
[»] chr5 (9 HSPs)
chr5 (153-186)||(24806970-24807003)
chr5 (156-188)||(39933029-39933061)
chr5 (156-187)||(21582549-21582580)
chr5 (156-186)||(14341962-14341992)
chr5 (156-186)||(18094513-18094543)
chr5 (156-186)||(18652423-18652453)
chr5 (156-186)||(32292672-32292702)
chr5 (156-186)||(39990235-39990265)
chr5 (153-186)||(40047545-40047578)
[»] chr4 (16 HSPs)
chr4 (153-186)||(3086087-3086120)
chr4 (153-186)||(19877969-19878002)
chr4 (153-186)||(26855535-26855568)
chr4 (153-186)||(54315269-54315302)
chr4 (156-186)||(10125513-10125543)
chr4 (156-186)||(16605406-16605436)
chr4 (156-186)||(22128939-22128969)
chr4 (156-186)||(37788094-37788124)
chr4 (153-186)||(388259-388292)
chr4 (153-186)||(6284197-6284230)
chr4 (153-186)||(14965553-14965586)
chr4 (153-186)||(23153871-23153904)
chr4 (153-186)||(32385392-32385425)
chr4 (153-186)||(42133590-42133623)
chr4 (153-185)||(41947597-41947629)
chr4 (156-188)||(44570962-44570994)
[»] chr3 (13 HSPs)
chr3 (153-186)||(44804761-44804794)
chr3 (156-187)||(38808306-38808337)
chr3 (156-186)||(8724498-8724528)
chr3 (156-186)||(9076385-9076415)
chr3 (153-187)||(19556838-19556872)
chr3 (156-186)||(51380061-51380091)
chr3 (153-186)||(390560-390593)
chr3 (153-186)||(7673939-7673972)
chr3 (153-186)||(20394024-20394057)
chr3 (153-186)||(39144439-39144472)
chr3 (153-186)||(39290738-39290771)
chr3 (153-186)||(42662491-42662524)
chr3 (153-186)||(43190522-43190555)
[»] chr1 (14 HSPs)
chr1 (153-186)||(3280893-3280926)
chr1 (153-186)||(5466927-5466960)
chr1 (153-186)||(13352667-13352700)
chr1 (153-186)||(25792363-25792396)
chr1 (156-186)||(35369424-35369454)
chr1 (153-186)||(2458704-2458737)
chr1 (153-186)||(6597056-6597089)
chr1 (153-186)||(10085927-10085960)
chr1 (153-186)||(17179299-17179332)
chr1 (153-186)||(26551504-26551537)
chr1 (153-186)||(31181391-31181424)
chr1 (153-186)||(39739591-39739624)
chr1 (153-185)||(487674-487706)
chr1 (156-188)||(6540494-6540526)
[»] chr6 (3 HSPs)
chr6 (153-186)||(12058783-12058816)
chr6 (156-185)||(31022420-31022449)
chr6 (153-185)||(18023782-18023814)
[»] scaffold0011 (1 HSPs)
scaffold0011 (153-185)||(13709-13741)
[»] scaffold0010 (1 HSPs)
scaffold0010 (153-185)||(134066-134098)


Alignment Details
Target: chr8 (Bit Score: 166; Significance: 5e-89; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 11 - 188
Target Start/End: Complemental strand, 468654 - 468477
Alignment:
Q  11 gaagcagagacttaatcttccatgcattaaagtctggctctaagaatagtgtgactaatgctgattgtaatgttgccatgaaacacatccatgcacaaag 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  468654 gaagcagagacttaatcttccatccattaaagtctggctctaagaatagtgtgactaatgctgattgtaatgttgccatgaaacacatccatgcacaaag 468555  T
Q  111 tgataagtaattgggatgacttgcataagctggaacctggtaaaaattaattatatttcttaatacgtgtgaaatgat 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  468554 tgataagtaattgggatgacttgcataagctggaacctggtaaaaattaattatattttttaatacgtatgaaatgat 468477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 475198 - 475060
Alignment:
Q  11 gaagcagagacttaatcttccatgcattaaagtctggctctaagaatagtgtgactaatgctgattgtaatgttgccatgaaacacatccatgcacaaag 110  Q
    |||| ||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  475198 gaagtagagaattaattttccatgcattaaggtctggctctaagaatagtgtgactaatgctgattgtaatgttgccatgaaacacatccatgctgaaag 475099  T
Q  111 tgataagtaattgggatgacttgcataagctggaacctg 149  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  475098 tgataaataattgggatgacttgcataagctggaacctg 475060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 449253 - 449120
Alignment:
Q  16 agagacttaatcttccatgcattaaagtctggctctaagaatagtgtgactaatgctgattgtaatgttgccatgaaacacatccatgcacaaagtgata 115  Q
    ||||| ||||||||||||||||| |||| |||||| ||||||||||  |||| || |||||||||||||| ||| | ||||||||| ||  | | |||||    
T  449253 agagatttaatcttccatgcattcaagtttggctcaaagaatagtgccactattgatgattgtaatgttgacattatacacatccaggctgacaatgata 449154  T
Q  116 agtaattgggatgacttgcataagctggaacctg 149  Q
    | ||||| ||||| ||||| |||| |||||||||    
T  449153 aataattaggatggcttgcgtaagatggaacctg 449120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 457529 - 457390
Alignment:
Q  11 gaagcagagacttaatcttccatgcattaaagtctggctctaagaatagtgtgactaatgctgattgtaatgttgccatgaaacacatccatgcacaaag 110  Q
    |||| ||||| ||||| ||||||||||| | ||||||||| |||||||  || | || || ||||||||||||||  || ||||||||||| ||  | |     
T  457529 gaagtagagaattaattttccatgcattcaggtctggctccaagaataacgtcagtattgatgattgtaatgttgaaattaaacacatccaagctgacaa 457430  T
Q  111 tgataagtaattgggatgacttgcataagctggaacctgg 150  Q
    |||||  ||||| ||||| ||||| |||||||||||||||    
T  457429 tgatatataattaggatggcttgcgtaagctggaacctgg 457390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 54 - 149
Target Start/End: Complemental strand, 480618 - 480523
Alignment:
Q  54 gaatagtgtgactaatgctgattgtaatgttgccatgaaacacatccatgcacaaagtgataagtaattgggatgacttgcataagctggaacctg 149  Q
    ||||| |||||||| || |||||| ||||| | ||| ||||||||||||||   || ||| |||||||| ||||| ||||||||||||||||||||    
T  480618 gaataatgtgactactgttgattgaaatgtagacattaaacacatccatgctgtaaatgacaagtaattaggatggcttgcataagctggaacctg 480523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 6899946 - 6899914
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaat 185  Q
    |||||||||||||||||||||||||||||||||    
T  6899946 aaaattaattatatttcttaatacgtgtgaaat 6899914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Complemental strand, 16861811 - 16861781
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  16861811 attaattatatttcttaatacgtgtgaaatg 16861781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 29851155 - 29851189
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatga 187  Q
    |||||||||||||||||||||||||||| ||||||    
T  29851155 aaaattaattatatttcttaatacgtgttaaatga 29851189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 33299507 - 33299473
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatga 187  Q
    ||||| |||||||||||||||||||||||||||||    
T  33299507 aaaataaattatatttcttaatacgtgtgaaatga 33299473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 1214794 - 1214827
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||| |||||    
T  1214794 aaaattaattatatttcttaatacgtgttaaatg 1214827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 5062189 - 5062152
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatgatga 190  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  5062189 aaaattaattacattttttaatacgtgtgaaatgatga 5062152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 182
Target Start/End: Original strand, 14762557 - 14762586
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtga 182  Q
    ||||||||||||||||||||||||||||||    
T  14762557 aaaattaattatatttcttaatacgtgtga 14762586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 23550867 - 23550900
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||| |||||||||||||||||    
T  23550867 aaaattaattatattttttaatacgtgtgaaatg 23550900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 28849175 - 28849207
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatgat 188  Q
    |||||||| ||||||||||||||||||||||||    
T  28849175 attaattacatttcttaatacgtgtgaaatgat 28849207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 29441080 - 29441112
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaat 185  Q
    ||||||||||| |||||||||||||||||||||    
T  29441080 aaaattaattagatttcttaatacgtgtgaaat 29441112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 36466826 - 36466794
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaat 185  Q
    |||||||||||||||| ||||||||||||||||    
T  36466826 aaaattaattatattttttaatacgtgtgaaat 36466794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 5e-18; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 27490085 - 27490211
Alignment:
Q  23 taatcttccatgcattaaagtctggctctaagaatagtgtgactaatgctgattgtaatgttgccatgaaacacatccatgcacaaagtgataagtaatt 122  Q
    |||||||||| ||||| |  |||| ||| | ||||||||| |||| || |||||||||||||||||| ||||||||||| ||  |||| ||||||  |||    
T  27490085 taatcttccacgcatttagatctgcctccatgaatagtgtcactagtgatgattgtaatgttgccattaaacacatccaggctgaaagagataaggtatt 27490184  T
Q  123 gggatgacttgcataagctggaacctg 149  Q
     ||||| |||||||| |||||||||||    
T  27490185 tggatggcttgcatatgctggaacctg 27490211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 22060863 - 22060896
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||||||||||||||    
T  22060863 aaaattaattatatttcttaatacgtgtgaaatg 22060896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 37985742 - 37985774
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatgat 188  Q
    |||||||||||||||||||||||||||||||||    
T  37985742 attaattatatttcttaatacgtgtgaaatgat 37985774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 4979153 - 4979186
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||| |||||||||||||    
T  4979153 aaaattaattatatttcttactacgtgtgaaatg 4979186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 4997062 - 4997095
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||| |||||||||||||    
T  4997062 aaaattaattatatttcttactacgtgtgaaatg 4997095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 9527667 - 9527700
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  9527667 aaaattaattacatttcttaatacgtgtgaaatg 9527700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 40649267 - 40649300
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  40649267 aaaattaattacatttcttaatacgtgtgaaatg 40649300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 18449995 - 18449963
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaat 185  Q
    ||||||||||| |||||||||||||||||||||    
T  18449995 aaaattaattacatttcttaatacgtgtgaaat 18449963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 10356 - 10323
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||||||||||||||    
T  10356 aaaattaattatatttcttaatacgtgtgaaatg 10323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 20684 - 20651
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||||||||||||||    
T  20684 aaaattaattatatttcttaatacgtgtgaaatg 20651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 27689159 - 27689126
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||||||||||||||    
T  27689159 aaaattaattatatttcttaatacgtgtgaaatg 27689126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 27131383 - 27131351
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaat 185  Q
    |||||||||||||||||||||||||||||||||    
T  27131383 aaaattaattatatttcttaatacgtgtgaaat 27131351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 187
Target Start/End: Original strand, 24161853 - 24161884
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatga 187  Q
    ||||||||||||||||||||||||||||||||    
T  24161853 attaattatatttcttaatacgtgtgaaatga 24161884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Original strand, 23709778 - 23709808
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  23709778 attaattatatttcttaatacgtgtgaaatg 23709808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Original strand, 40704607 - 40704637
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  40704607 attaattatatttcttaatacgtgtgaaatg 40704637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 182
Target Start/End: Original strand, 553989 - 554018
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtga 182  Q
    ||||||||||||||||||||||||||||||    
T  553989 aaaattaattatatttcttaatacgtgtga 554018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 185
Target Start/End: Complemental strand, 5113929 - 5113896
Alignment:
Q  152 aaaaattaattatatttcttaatacgtgtgaaat 185  Q
    |||||||||||| |||||||||||||||||||||    
T  5113929 aaaaattaattacatttcttaatacgtgtgaaat 5113896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 9417668 - 9417635
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  9417668 aaaattaattacatttcttaatacgtgtgaaatg 9417635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 17833129 - 17833162
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  17833129 aaaattaattacatttcttaatacgtgtgaaatg 17833162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 19293262 - 19293295
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  19293262 aaaattaattacatttcttaatacgtgtgaaatg 19293295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 31582045 - 31582012
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  31582045 aaaattaattacatttcttaatacgtgtgaaatg 31582012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 46342951 - 46342984
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  46342951 aaaattaattacatttcttaatacgtgtgaaatg 46342984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 8251862 - 8251894
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaat 185  Q
    |||||||||||||||| ||||||||||||||||    
T  8251862 aaaattaattatattttttaatacgtgtgaaat 8251894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 32466219 - 32466191
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaa 184  Q
    |||||||||||||||||||||||||||||    
T  32466219 attaattatatttcttaatacgtgtgaaa 32466191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 184
Target Start/End: Original strand, 32468026 - 32468054
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaa 184  Q
    |||||||||||||||||||||||||||||    
T  32468026 attaattatatttcttaatacgtgtgaaa 32468054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 24806970 - 24807003
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||||||||||||||    
T  24806970 aaaattaattatatttcttaatacgtgtgaaatg 24807003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 39933029 - 39933061
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatgat 188  Q
    |||||||||||||||||||||||||||||||||    
T  39933029 attaattatatttcttaatacgtgtgaaatgat 39933061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 187
Target Start/End: Complemental strand, 21582580 - 21582549
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatga 187  Q
    ||||||||||||||||||||||||||||||||    
T  21582580 attaattatatttcttaatacgtgtgaaatga 21582549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Original strand, 14341962 - 14341992
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  14341962 attaattatatttcttaatacgtgtgaaatg 14341992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Complemental strand, 18094543 - 18094513
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  18094543 attaattatatttcttaatacgtgtgaaatg 18094513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Original strand, 18652423 - 18652453
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  18652423 attaattatatttcttaatacgtgtgaaatg 18652453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Original strand, 32292672 - 32292702
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  32292672 attaattatatttcttaatacgtgtgaaatg 32292702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Complemental strand, 39990265 - 39990235
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  39990265 attaattatatttcttaatacgtgtgaaatg 39990235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 40047545 - 40047578
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||| |||||||||||||||||    
T  40047545 aaaattaattatattttttaatacgtgtgaaatg 40047578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 3086120 - 3086087
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||||||||||||||    
T  3086120 aaaattaattatatttcttaatacgtgtgaaatg 3086087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 19877969 - 19878002
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||||||||||||||    
T  19877969 aaaattaattatatttcttaatacgtgtgaaatg 19878002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 26855535 - 26855568
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||||||||||||||    
T  26855535 aaaattaattatatttcttaatacgtgtgaaatg 26855568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 54315269 - 54315302
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||||||||||||||    
T  54315269 aaaattaattatatttcttaatacgtgtgaaatg 54315302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Complemental strand, 10125543 - 10125513
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  10125543 attaattatatttcttaatacgtgtgaaatg 10125513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Original strand, 16605406 - 16605436
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  16605406 attaattatatttcttaatacgtgtgaaatg 16605436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Original strand, 22128939 - 22128969
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  22128939 attaattatatttcttaatacgtgtgaaatg 22128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Original strand, 37788094 - 37788124
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  37788094 attaattatatttcttaatacgtgtgaaatg 37788124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 388259 - 388292
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  388259 aaaattaattacatttcttaatacgtgtgaaatg 388292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 6284197 - 6284230
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  6284197 aaaattaattacatttcttaatacgtgtgaaatg 6284230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 14965553 - 14965586
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||| |||||||    
T  14965553 aaaattaattatatttcttaatacgtatgaaatg 14965586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 23153871 - 23153904
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||| ||||||||||    
T  23153871 aaaattaattatatttcttaatatgtgtgaaatg 23153904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 32385425 - 32385392
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||| ||||||||||    
T  32385425 aaaattaattatatttcttaatatgtgtgaaatg 32385392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 42133623 - 42133590
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  42133623 aaaattaattaaatttcttaatacgtgtgaaatg 42133590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 41947629 - 41947597
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaat 185  Q
    ||||||||||| |||||||||||||||||||||    
T  41947629 aaaattaattacatttcttaatacgtgtgaaat 41947597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 44570962 - 44570994
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatgat 188  Q
    |||||||| ||||||||||||||||||||||||    
T  44570962 attaattacatttcttaatacgtgtgaaatgat 44570994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 44804794 - 44804761
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||||||||||||||    
T  44804794 aaaattaattatatttcttaatacgtgtgaaatg 44804761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 187
Target Start/End: Original strand, 38808306 - 38808337
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatga 187  Q
    ||||||||||||||||||||||||||||||||    
T  38808306 attaattatatttcttaatacgtgtgaaatga 38808337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Original strand, 8724498 - 8724528
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  8724498 attaattatatttcttaatacgtgtgaaatg 8724528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Original strand, 9076385 - 9076415
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  9076385 attaattatatttcttaatacgtgtgaaatg 9076415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 19556838 - 19556872
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatga 187  Q
    |||||||||||||||| ||||||||||||||||||    
T  19556838 aaaattaattatattttttaatacgtgtgaaatga 19556872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Complemental strand, 51380091 - 51380061
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  51380091 attaattatatttcttaatacgtgtgaaatg 51380061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 390593 - 390560
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  390593 aaaattaattacatttcttaatacgtgtgaaatg 390560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 7673972 - 7673939
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  7673972 aaaattaattacatttcttaatacgtgtgaaatg 7673939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 20394057 - 20394024
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  20394057 aaaattaattacatttcttaatacgtgtgaaatg 20394024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 39144472 - 39144439
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||| |||||||||||||||||    
T  39144472 aaaattaattatattttttaatacgtgtgaaatg 39144439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 39290738 - 39290771
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||| |||||||||||||||||    
T  39290738 aaaattaattatattttttaatacgtgtgaaatg 39290771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 42662524 - 42662491
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  42662524 aaaattaattacatttcttaatacgtgtgaaatg 42662491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 43190555 - 43190522
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  43190555 aaaattaattacatttcttaatacgtgtgaaatg 43190522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 3280926 - 3280893
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||||||||||||||    
T  3280926 aaaattaattatatttcttaatacgtgtgaaatg 3280893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 5466960 - 5466927
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||||||||||||||    
T  5466960 aaaattaattatatttcttaatacgtgtgaaatg 5466927  T

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Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 13352667 - 13352700
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||||||||||||||    
T  13352667 aaaattaattatatttcttaatacgtgtgaaatg 13352700  T

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Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 25792363 - 25792396
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||||||||||||||||||||||||||    
T  25792363 aaaattaattatatttcttaatacgtgtgaaatg 25792396  T

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Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 186
Target Start/End: Complemental strand, 35369454 - 35369424
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||||||    
T  35369454 attaattatatttcttaatacgtgtgaaatg 35369424  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 2458704 - 2458737
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  2458704 aaaattaattacatttcttaatacgtgtgaaatg 2458737  T

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Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 6597056 - 6597089
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||| |||||    
T  6597056 aaaattaattatatttcttaatacgtgtaaaatg 6597089  T

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Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 10085927 - 10085960
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  10085927 aaaattaattacatttcttaatacgtgtgaaatg 10085960  T

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Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 17179332 - 17179299
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  17179332 aaaattaattacatttcttaatacgtgtgaaatg 17179299  T

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Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Complemental strand, 26551537 - 26551504
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    |||||||||||||||||||||||||||| |||||    
T  26551537 aaaattaattatatttcttaatacgtgttaaatg 26551504  T

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Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 31181391 - 31181424
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  31181391 aaaattaattacatttcttaatacgtgtgaaatg 31181424  T

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Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 39739591 - 39739624
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  39739591 aaaattaattacatttcttaatacgtgtgaaatg 39739624  T

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Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 487674 - 487706
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaat 185  Q
    ||||||||||| |||||||||||||||||||||    
T  487674 aaaattaattacatttcttaatacgtgtgaaat 487706  T

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Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 6540526 - 6540494
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaatgat 188  Q
    |||||||| ||||||||||||||||||||||||    
T  6540526 attaattacatttcttaatacgtgtgaaatgat 6540494  T

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Target: chr6 (Bit Score: 30; Significance: 0.00000007; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 12058783 - 12058816
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaatg 186  Q
    ||||||||||| ||||||||||||||||||||||    
T  12058783 aaaattaattacatttcttaatacgtgtgaaatg 12058816  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 185
Target Start/End: Complemental strand, 31022449 - 31022420
Alignment:
Q  156 attaattatatttcttaatacgtgtgaaat 185  Q
    ||||||||||||||||||||||||||||||    
T  31022449 attaattatatttcttaatacgtgtgaaat 31022420  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 18023782 - 18023814
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaat 185  Q
    |||||||||||||||||||||||||||| ||||    
T  18023782 aaaattaattatatttcttaatacgtgtaaaat 18023814  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 13741 - 13709
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaat 185  Q
    |||||||||||||||||||||||||| ||||||    
T  13741 aaaattaattatatttcttaatacgtatgaaat 13709  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 185
Target Start/End: Original strand, 134066 - 134098
Alignment:
Q  153 aaaattaattatatttcttaatacgtgtgaaat 185  Q
    |||||||||||||||||| ||||||||||||||    
T  134066 aaaattaattatatttctaaatacgtgtgaaat 134098  T

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