View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1154_low_21 (Length: 321)
Name: NF1154_low_21
Description: NF1154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1154_low_21 |
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Alignment Details
Target: chr5 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 98 - 290
Target Start/End: Original strand, 14281385 - 14281582
Alignment:
| Q |
98 |
cactgaacaaatcgctccttacttggccatgttttttgccggtaacttcacactcgtcgctctttcttcatccattttatgtttgttaag-----ctcat |
192 |
Q |
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| T |
14281385 |
cactgaacaaatcgctccttacttggccatgttttttgccggtaacttcacactcattgctctttcttcatccattttatgtttgttaagctcatctcat |
14281484 |
T |
|
| Q |
193 |
ctcatctcnnnnnnnnnnaggttgctttggcctcacactcctaagttgcttcttcatttaccgggtattagagtttcacattattccttttcattcat |
290 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14281485 |
ctcatctcttttttttttaggttgctttggcctcacactcctaagttgcttcttcatttaccgggtattagagtttcacattattccttttcattcat |
14281582 |
T |
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